Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTGAGTGGTGAGTTGTCCATCTACAAAATCAGAACCTTACCTTTAATCCCAATCATATTCCGTGTCTTAACACATGCACCCAATACCTTCCTCAATTTTATCAACAAACAACAAAATATCCTCGTCTTTGTGGCTACAAATTCTTCTCGTCACCACCTACCTTCCCAAATCTCAACTCTTCCATTTCTAAAAAGATTAAAAAAGTCATCCATATTCTCTGCAACAAAATACCCCAAAAAAAGGAAAAAGAAAAAGAAAAAATGGGAGTAGTGGAAGAAGCACATAATGTAAAAATAGTAGGGAAAGGAATACAAGTAATAGTATTAGGTCATGGATTTGGAACAGACCAATCAGTATGGAGACATTTAGTACCTCATTTAATTGATGAATATAAGGTAGTTTTGTATGATAATATGGGAGCTGGAACTACAAACCCAGATTACTTTGATTTTGAGAGGTACTCAACTTTGGAAGGTTATGCTTATGATTTGTTGGCTATTTTGGAGGAATTTCAGTTATCTTCTTGTATTTTTGTTGGTCATTCTGTTTCTGCCATGGTTGGTGCTATTGCTTCCATTATGCGACCTGATCTTTTCTCTAAGCTCATTCTTATCTCTGCCTCTCCAAGGTACGTAACGTACTCTCTTTTACTCAATCTTCTGTAATCCATTTTCCATAGTAGAAGTTTATTATCATGTTCTTATATTAGATTCACTCAACTAATACAAGTTGGTGGAATACTGAAATTGGTGTGGAACTCACCTTGTGAATCGGAGGTCACATAGTCGAGTCTTTAATAGATGTGTTACGGTTGAGGGTGGTTTAAGAGTTAGACATGCGTAACTAGCTGGTTGGTGGAATACTGGAATTGGCGTGGAACTCACCTTGTTAATCGGAGGTCACATAGTCGAGTCTTTAATAGATGTGTTACGGTTGAGGGTGGTTTAAGAGTTAGACATGCGTAACTAGCTGGTTGGTGGAATACTGGAATTGGCGTGGAACTCACCTTGTGAATCGGAGGAGGTCACATAGTCAAGTCTTTAATAGATGTGTTATGATTGAGGGTGGTTTAAGAGTTAGACATGCGTAACTAGCTGGTTAACCTGAGATAAGTGTTGTTTTAATAAAAAATAATACCCTGTATTATGTAATCCATTATCCATATTGCTCATAGGAGTTTGTTGTCATCTTATTAAATTGGTCTCGCGTATATATGGATCAATCAAATTCGTTAATGGCTAACCTGAGACAAGTGTTGTTCATAACGAATATTTCTCTTACCCTAAAAAAAAAAAAAACATGAATTAATTTTTGTTGAATAAGGGTTGTGCCTCACAACCTTGATAGTGTGGGATTAAATCTCAATAGGGTGTTTTAGGGGTGGGATTTTCTTGCTATAATTCCCCCCAACTCCTAAGAGGCCTAAGTTGACTTATTTAAGGTTTTTGTATATATTATAAAAACTTATCGCTCGGAATTATTTTGAAAACACGACTTCCAAAATTGTGAATATTTTGTGGTTATTAAAAGGTTTAAATATTAGGGAAAATTGGTTAGAAGGTAAATTGTTCATGTTAATTTGTTTATTCTAACGAGTCAAACGCATGTTGTGTTTGGTTGGAAGGGAATTCTGGTTTCCCATTTTCTTTGTTTTATTTTGTTTTTAACAGATACAATTAATTTTCCTCAACTGAAATTAGTATTAGGGTGATGATAAAGGTCGCAAGCTGCGATAATATTTAGTTGTCGCAATCTTACGTGTCAGTTTGATTGGTATATATAGGCGCCACTTAAGCTATGCATTATCAGAATATTTTTACTATCAATGCAATATTTTTACTACAAAGTATGTAAATAAGGCATTCGATATAAAGAAGGAAACAAATTTGAATATTAAGATTTTCTACCTTTATTGAAACATGTATAATAGGTTATAATATTAATATAAGTTAACTATTTTAGTTTACAATTTAAATCAAGACACATAAACATGTCATGTCAACATTGTGACACGGCTTAAAGGTCTCATGTTGCGACCTTTATCATTTTCGTTAGTGTTATTGTTAAAGCTTTTATCGCGTTATCCAACATTTGGGAATACAAATGATGTTTAGATCCAATTACTAATAATGTAAACCATTTTGTAAGCAACACATATGTGTATCTCACATTCTTAAATTTTAGAGAAATATTGTATAGGTTTGGGCAACCTAATAAGGAGGAAAGTTCAGTCTATTTATAAGCTCCATGGAAGTTTCATACTAAAATTAATTGACAATGTGGGAGTAACTCTACAAGTTTATAAGGTGGTATTTTATACCATCTTTTTCCAACGTGGGACAACTAACATGTGATTACATTGGTTTAACAAACCCCTTACGTGTGAGTGTCCTTAAGTTTCAGAAAGAGGGCTCTGATTAGACCTGTCAAACGGGTCGGTCGGGTCGGGTTGTAAAAAACTATTTTCGGGTTCGGGTTAGATCGGGCGGTCACTTTCGGGTTCGGGTTTACAAATGTTTGTTCAAGACCTAGAACTTTCGGGTTCGGGTCGATCCAACGGGTTGAGAGATTTTTAAAACGCGCATTATATTTTCATTTATTTAGGTGATAAATATACAAAACATGGGCACAAATTAACAAATTTTCCTACACACGTTTATATTTAGTCAAATTCAACCATAAAATGGGGTATAATTAAAATTAAAATTATATCACACACAATAATAGTAAAAACAACGTGTTTAATATGCTTAAATTTTCTCATAATCTCATTTATTACTATAAATACAACGATTTTCAATCGGTCGGGTCCAAAACGGGTTGGATCGGATTTTGACCCATTACTTTTCGGGTTGCTCGGATTCGGATAAAATCAGGTTACGGGTCACAAAATCTTGTTCAGGACCCAGTATTTCCGGGTCGGGTCGATTTTTGACAGGTCTAGCTCTGATACCATGTTAATTTTCAGAGAAATATAAAATGAAGCTGGAAAACCCAATAAAGAGGAAGAGACCGAGTTTGGTCTATTTAAAAGACTAATGAATGTTCCACACTAAAACCAATTAACAATAGTGAGAATAACTCCACAAGCTTATTACGTGGTACTCCCTCCGTATTTATTTAAGAGATACACTTGGTCGGGCACGAGTATTAAGAAAAAGAATTGAATGAAATAAAATAATAAAGCAAGTGGAGTTGGATAGATATTTTAATGAGTAAACAAGTGGGGACCATGTCATTTTGTGGGGTGGGAGGTGGGATGAGTTAATGAAATTATTTGTTTAATAGGATGGTGGGTCATAGAGTAAATTAGATGTATTATTTAATTAGATGGTGGGATTGATAAGTTACTAAAAATAGCAAGTGTATCTCTTAAATAAATAGGCCGGAAAATGCAAGTGTACCCCTTAAATAAATACGGAGAGAATATTTTCTTTCATTTTTCTCCCATGTAGTACAACTCACATGCGATAACATTGTATTTCAACTACTCCCTCCGTCCCGGAATACTTGACCTGTTTTCCTTATCGGGCCGTCCCTTAATACTTGACCTGTTTCTAAAAATGGAAATATTCTAACAATATTATATTATTTCTCACTCCACCCCTATTAACCCACCTACCCCCTACTCCATACAAAAAATAATTAAAAATTCAACCCCTACTCTCCCCCAACCCCACCTCTTAACCCATCTCCCACTAACTACATTAAAATAATACCCCACTATCAACTATTACCTATTAAATTAAATAAGTCAATTCAAGTCCCTTAAACTCTGTGCCGGTCAAACCGGGTCGAATATTCCGGGACAGAGGGAGTATATTGTTCGTTTCTTTTAAATTGGACAAAAAATGAGTTTCGAACTCACATGTGTGTGTGTTTNTATATTGTTCGTTTCTTTTAAATTGGACAAAAAATGAGTTTCGAACTCACATGTGTGTGTGTTTTTTTGTTACTCCTAACAAAATCCATCCCAACAAGTGGAGTGATCAAAGTGATATAGTTGGGACATCCAAAATCAATTGACATGATTCATCACATGCCTTGTCTAAACTCTTAACTCCTCTCTTCTCTTTATATCTCCAACTATATTTCACTATTTCAGGTACTTGAACGATGTTGATTACTACGGAGGCTTTGAGCAAGAAGACCTAGACCAACTCTTCGAAGCAATGCAAGACAATTACAAGGCCTGGTGTTCGGGTTTCGCCCCGTTAGCCGTGGGCGGGGACATGGACTCAGTAGCGGTCCAAGAATTCAGCCGAACCTTATTCAACATGCGGCCCGATATTGCCCTAAGTGTGGGCCAAACCATTTTCCAAAGCGACTTCAGACACCTCCTTTGTCACGTGACTGTTCCTTGTCACATTATTCAGAGCATCAAAGACTTGGCTGTACCTGTGGTGGTTTCTGAGTACCTTCATCGGAACCTTGGTGGTGACTCCATTGTTGAGGTGATGTCATCGGAAGGTCATCTTCCTCAGTTGAGTTCACCTGATAGTGTGATCCCTGTGCTGTTACGACACATTCGTCGTGATATAGTTGTCTAATCTAAAAAGATTGATTTAGTATTGTGTTTTTGTTAATTAAGTTTTTAGTGTTGTATGTTTAACGTAATTAGGCTAAATAACTGAAAAACATGTTTGATTTTTATTTCTAAGTGTATCATATGTCATTTCTCTTAAAGAAAAGTTTATCATATGGGTATATGGCATTGTCGTCTGTATTATGAAGGAAGCACATTTAATTAAGGTGCATCCTCTCACTTTTTTTTCCCTTAAATGTGATTTATTTCAGGAGAAAATGTGAAAAGGACTAGTAATGTGCATAAAATATCATTGAATACACGAAGCACTGTACTCCTAAGAAATTTCTTAGGGATTCAGAGGCATACATAATACGAGTAGTATTGTCAACTGTCAAGTTTATAATTTGTCCATCA GGTGAGTGGTGAGTTGTCCATCTACAAAATCAGAACCTTACCTTTAATCCCAATCATATTCCGTGTCTTAACACATGCACCCAATACCTTCCTCAATTTTATCAACAAACAACAAAATATCCTCGTCTTTGTGGCTACAAATTCTTCTCGTCACCACCTACCTTCCCAAATCTCAACTCTTCCATTTCTAAAAAGATTAAAAAAGTCATCCATATTCTCTGCAACAAAATACCCCAAAAAAAGGAAAAAGAAAAAGAAAAAATGGGAGTAGTGGAAGAAGCACATAATGTAAAAATAGTAGGGAAAGGAATACAAGTAATAGTATTAGGTCATGGATTTGGAACAGACCAATCAGTATGGAGACATTTAGTACCTCATTTAATTGATGAATATAAGGTAGTTTTGTATGATAATATGGGAGCTGGAACTACAAACCCAGATTACTTTGATTTTGAGAGGTACTCAACTTTGGAAGGTTATGCTTATGATTTGTTGGCTATTTTGGAGGAATTTCAGTTATCTTCTTGTATTTTTGTTGGTCATTCTGTTTCTGCCATGGTTGGTGCTATTGCTTCCATTATGCGACCTGATCTTTTCTCTAAGCTCATTCTTATCTCTGCCTCTCCAAGGTACTTGAACGATGTTGATTACTACGGAGGCTTTGAGCAAGAAGACCTAGACCAACTCTTCGAAGCAATGCAAGACAATTACAAGGCCTGGTGTTCGGGTTTCGCCCCGTTAGCCGTGGGCGGGGACATGGACTCAGTAGCGGTCCAAGAATTCAGCCGAACCTTATTCAACATGCGGCCCGATATTGCCCTAAGTGTGGGCCAAACCATTTTCCAAAGCGACTTCAGACACCTCCTTTGTCACGTGACTGTTCCTTGTCACATTATTCAGAGCATCAAAGACTTGGCTGTACCTGTGGTGGTTTCTGAGTACCTTCATCGGAACCTTGGTGGTGACTCCATTGTTGAGGTGATGTCATCGGAAGGTCATCTTCCTCAGTTGAGTTCACCTGATAGTGTGATCCCTGTGCTGTTACGACACATTCGTCGTGATATAGTTGTCTAATCTAAAAAGATTGATTTAGTATTGTGTTTTTGTTAATTAAGTTTTTAGTGTTGTATGTTTAACGTAATTAGGCTAAATAACTGAAAAACATGTTTGATTTTTATTTCTAAGTGTATCATATGTCATTTCTCTTAAAGAAAAGTTTATCATATGGGTATATGGCATTGTCGTCTGTATTATGAAGGAAGCACATTTAATTAAGGTGCATCCTCTCACTTTTTTTTCCCTTAAATGTGATTTATTTCAGGAGAAAATGTGAAAAGGACTAGTAATGTGCATAAAATATCATTGAATACACGAAGCACTGTACTCCTAAGAAATTTCTTAGGGATTCAGAGGCATACATAATACGAGTAGTATTGTCAACTGTCAAGTTTATAATTTGTCCATCA ATGGGAGTAGTGGAAGAAGCACATAATGTAAAAATAGTAGGGAAAGGAATACAAGTAATAGTATTAGGTCATGGATTTGGAACAGACCAATCAGTATGGAGACATTTAGTACCTCATTTAATTGATGAATATAAGGTAGTTTTGTATGATAATATGGGAGCTGGAACTACAAACCCAGATTACTTTGATTTTGAGAGGTACTCAACTTTGGAAGGTTATGCTTATGATTTGTTGGCTATTTTGGAGGAATTTCAGTTATCTTCTTGTATTTTTGTTGGTCATTCTGTTTCTGCCATGGTTGGTGCTATTGCTTCCATTATGCGACCTGATCTTTTCTCTAAGCTCATTCTTATCTCTGCCTCTCCAAGGTACTTGAACGATGTTGATTACTACGGAGGCTTTGAGCAAGAAGACCTAGACCAACTCTTCGAAGCAATGCAAGACAATTACAAGGCCTGGTGTTCGGGTTTCGCCCCGTTAGCCGTGGGCGGGGACATGGACTCAGTAGCGGTCCAAGAATTCAGCCGAACCTTATTCAACATGCGGCCCGATATTGCCCTAAGTGTGGGCCAAACCATTTTCCAAAGCGACTTCAGACACCTCCTTTGTCACGTGACTGTTCCTTGTCACATTATTCAGAGCATCAAAGACTTGGCTGTACCTGTGGTGGTTTCTGAGTACCTTCATCGGAACCTTGGTGGTGACTCCATTGTTGAGGTGATGTCATCGGAAGGTCATCTTCCTCAGTTGAGTTCACCTGATAGTGTGATCCCTGTGCTGTTACGACACATTCGTCGTGATATAGTTGTCTAA MGVVEEAHNVKIVGKGIQVIVLGHGFGTDQSVWRHLVPHLIDEYKVVLYDNMGAGTTNPDYFDFERYSTLEGYAYDLLAILEEFQLSSCIFVGHSVSAMVGAIASIMRPDLFSKLILISASPRYLNDVDYYGGFEQEDLDQLFEAMQDNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIALSVGQTIFQSDFRHLLCHVTVPCHIIQSIKDLAVPVVVSEYLHRNLGGDSIVEVMSSEGHLPQLSSPDSVIPVLLRHIRRDIVV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo18898.1 vs. NCBI nr
Match: gi|731337039|ref|XP_010679577.1| (PREDICTED: probable esterase D14L [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 519.2 bits (1336), Expect = 4.200e-144 Identity = 255/270 (94.44%), Postives = 261/270 (96.67%), Query Frame = 1
BLAST of Spo18898.1 vs. NCBI nr
Match: gi|1009166534|ref|XP_015901642.1| (PREDICTED: probable esterase KAI2 [Ziziphus jujuba]) HSP 1 Score: 481.5 bits (1238), Expect = 9.700e-133 Identity = 229/270 (84.81%), Postives = 254/270 (94.07%), Query Frame = 1
BLAST of Spo18898.1 vs. NCBI nr
Match: gi|976904780|gb|KVH92437.1| (hypothetical protein Ccrd_005494, partial [Cynara cardunculus var. scolymus]) HSP 1 Score: 480.7 bits (1236), Expect = 1.700e-132 Identity = 227/270 (84.07%), Postives = 255/270 (94.44%), Query Frame = 1
BLAST of Spo18898.1 vs. NCBI nr
Match: gi|225438922|ref|XP_002284043.1| (PREDICTED: probable esterase KAI2 [Vitis vinifera]) HSP 1 Score: 480.7 bits (1236), Expect = 1.700e-132 Identity = 228/269 (84.76%), Postives = 252/269 (93.68%), Query Frame = 1
BLAST of Spo18898.1 vs. NCBI nr
Match: gi|697157474|ref|XP_009587492.1| (PREDICTED: probable esterase D14L [Nicotiana tomentosiformis]) HSP 1 Score: 478.8 bits (1231), Expect = 6.300e-132 Identity = 230/270 (85.19%), Postives = 251/270 (92.96%), Query Frame = 1
BLAST of Spo18898.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F299_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g127710 PE=4 SV=1) HSP 1 Score: 519.2 bits (1336), Expect = 2.900e-144 Identity = 255/270 (94.44%), Postives = 261/270 (96.67%), Query Frame = 1
BLAST of Spo18898.1 vs. UniProtKB/TrEMBL
Match: A5B7C0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0129g00530 PE=4 SV=1) HSP 1 Score: 480.7 bits (1236), Expect = 1.200e-132 Identity = 228/269 (84.76%), Postives = 252/269 (93.68%), Query Frame = 1
BLAST of Spo18898.1 vs. UniProtKB/TrEMBL
Match: A0A118JV34_CYNCS (Uncharacterized protein (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_005494 PE=4 SV=1) HSP 1 Score: 480.7 bits (1236), Expect = 1.200e-132 Identity = 227/270 (84.07%), Postives = 255/270 (94.44%), Query Frame = 1
BLAST of Spo18898.1 vs. UniProtKB/TrEMBL
Match: A0A067KID5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12496 PE=4 SV=1) HSP 1 Score: 477.2 bits (1227), Expect = 1.300e-131 Identity = 229/268 (85.45%), Postives = 251/268 (93.66%), Query Frame = 1
BLAST of Spo18898.1 vs. UniProtKB/TrEMBL
Match: M1CBX8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024946 PE=4 SV=1) HSP 1 Score: 476.1 bits (1224), Expect = 2.800e-131 Identity = 226/270 (83.70%), Postives = 252/270 (93.33%), Query Frame = 1
BLAST of Spo18898.1 vs. ExPASy Swiss-Prot
Match: KAI2_ARATH (Probable esterase KAI2 OS=Arabidopsis thaliana GN=KAI2 PE=1 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 2.900e-129 Identity = 216/270 (80.00%), Postives = 249/270 (92.22%), Query Frame = 1
BLAST of Spo18898.1 vs. ExPASy Swiss-Prot
Match: D14L_ORYSJ (Probable esterase D14L OS=Oryza sativa subsp. japonica GN=D14L PE=2 SV=1) HSP 1 Score: 453.4 bits (1165), Expect = 1.800e-126 Identity = 220/271 (81.18%), Postives = 248/271 (91.51%), Query Frame = 1
BLAST of Spo18898.1 vs. ExPASy Swiss-Prot
Match: D14_ORYSJ (Strigolactone esterase D14 OS=Oryza sativa subsp. japonica GN=D14 PE=1 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 1.600e-82 Identity = 146/258 (56.59%), Postives = 196/258 (75.97%), Query Frame = 1
BLAST of Spo18898.1 vs. ExPASy Swiss-Prot
Match: D14_ARATH (Strigolactone esterase D14 OS=Arabidopsis thaliana GN=D14 PE=1 SV=1) HSP 1 Score: 307.0 bits (785), Expect = 2.100e-82 Identity = 148/261 (56.70%), Postives = 197/261 (75.48%), Query Frame = 1
BLAST of Spo18898.1 vs. ExPASy Swiss-Prot
Match: DAD2_PETHY (Probable strigolactone esterase DAD2 OS=Petunia hybrida GN=DAD2 PE=1 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 3.900e-81 Identity = 146/257 (56.81%), Postives = 193/257 (75.10%), Query Frame = 1
BLAST of Spo18898.1 vs. TAIR (Arabidopsis)
Match: AT4G37470.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 462.6 bits (1189), Expect = 1.600e-130 Identity = 216/270 (80.00%), Postives = 249/270 (92.22%), Query Frame = 1
BLAST of Spo18898.1 vs. TAIR (Arabidopsis)
Match: AT3G03990.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 307.0 bits (785), Expect = 1.200e-83 Identity = 148/261 (56.70%), Postives = 197/261 (75.48%), Query Frame = 1
BLAST of Spo18898.1 vs. TAIR (Arabidopsis)
Match: AT3G24420.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 218.8 bits (556), Expect = 4.100e-57 Identity = 107/258 (41.47%), Postives = 169/258 (65.50%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo18898.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo18898.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo18898.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo18898.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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