Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGGAGAAAATGGAAGAAAAATGTTGGAGAAGATGATGGATGTAAAAGAAGCCAAAAAGCAGATATTATTCTCATTGCCAATGATACTCACTAATGTGTTTTACAGTCTAATTCCGGTGGTTTCAGTTATGTTTGCCGGTCATCTCGGTCAGCTACAATTGGCTGGCTCTACTCTTGCCAATTCTTGGGCTACTGTCACTGGTTTTTCTTTCATGGTCAGCATTTTATTTCTCTTTTTTATTTTTATTTTTATTTAAAGTTTGTTTTCGAGCAATTTCTTTCAATATTGCTTAAAGAACGTTAAATTTCCATAATACGCCACTTGATAACATATTTAACACCATACCGTTCACGTCAGCATGGAAAAAAGAAAAGTAATTTTTTTTTCCCGGTTCAACACAAAACCGCCAACTCAAATGGCGGTTTTGTTTTAAAGAAAAACCGCCATTTGAGTTGGCTGTTTCGAATGCATCATATCTCAACAGAATTGGGTCTGGAGAAGTGGAAGAAGTGAACCGCCAAATGAAACGACGGTTCATTTTACGTAAGCGGCTAAATAAAATTGCGGTTTAGTTGGGTCAACCACTATTTCAGTTGGCGGTTTAGTACCGATTGATAAAATAAAAAAAATTAGACCGATTTTGATGCTGACGTGAACGGTATGGTGGAAAATATGTATAAAATAGCGTATTTTGGAAATTTAACGTTCTTTAAGCAATATTGAAGGAAATCGCTCTTTGTTTTCTTACTTCAGATGGTTGGCTAAAAAACAGGAAACTGACCAACATTCTTATCTAGGAACCTGTTGTGTACAATATGATACAAATGAAATCAGAAAGATCTTTTTCAATGTTTCTGGATTTCTGCTGTTTTCAGATATATCTGCATGTTGATTACCTAATTAGCTAGATATGTTCAAGCTTCCTACCCAAAATAATGAACACTAAAATGAAATGCATACTCCTTGTCCAACTAGGCGGTACTCATAAATGTATAATTTGTTGAACTTGCTTGTGAAAAAGAAACTACTCCGTAATTCATTGCAGTAAATTCAGAGATGAAAGTAGCCAAACTTCTGAGAAAAAGAGCAAATACTAGTCAACTAAACATCTAAGAAAGAAGAAACCTCGTCGGTCACATGAATGCACTCAAAAGATATAGCTGGAAAAAAGTTGTAAAAGGCATCTTAAGGACTTTTTCTCTTCACCTAATCTGGTCTAACTTTTTTAGTTTTTGATATGGACTTGTCTGATTTTTCTAGTTTCTGGTTTGGTTTAATACTCTAATCTGGTTTGGTTTGGTCTGGTCTGATCTAAATGTTTGTTGTGAGTGATTTTTATTTTTCTGGTCTGGTCAAGCATGATCAGTTCTGGTCTGATTTTTCGGGTCTTGTCTAATAAGTAATAAAAATAAGGTAAAGAGAACAAAGTCTGATGTATGAAATAAGAAGCATCAGTGTATCACTATGTAAAAGCTCCAGGAAAGAAACATCATTGATGATCAAAGGAAGCACCATCAGAAGATATATTACATCTCAGCCCTCTAGACTCTAGAGCCAAAACAATCCCAACCCACACATCCATAAAGAGGAAGCTATCTTCATCAATATTCTCTTGTTTCCTCTATGTAATTTTTTTCCCTAGAACTAGCCTTTTTTTTTTTTTAGTTTGTTTTCTTACATGTTCATTTTTGTCCAACTTTTATGGTTACAGCTCGGCTTAAGTGGTGCACTCGAGACATTATGTGGACAAGGATTTGGTGCAAACTTGTACAAAATCCTAGGGATTTACCTCCAAGCATCATGTATAATCTCACTCCTTTTCTCCATAATCATATCCGTACTATGGTGGTTTACGGAACCCATCTTAAACTTACTCCATCAAACTCCTGATATTTCCAAAGAAGCAGCACTCTACATGAGATTTCTAATACCAGGAATATTCGCGTATGGCATCTTACAGAACATCTTAAGGTTCCTACAGACACAATCTGTTGTTTTTCCTTTAGTTGTGTTGTCTTTTGTTCCGTTGCTTTTGCATTGTGGCCTTAGCTATTTGCTGGTTCATTTCACAACCCTTGGTTATAAGGGAGCAGCATTGGCTACCTCTATAACGTTTTGGTTTTCAGTTATGATTTTGATTATATATGTGAATTACGCTAAGAAATTCGAGCATACTTGGAAAGGGTTATCGAAGGAAGCGTTTTGTCATGTCTTTGCCAACTTGAAATTGGCATTACCTTCTGCTGCTATGGTTTGGTAAGTACGTTTTCTTCTATTTTTTGACTTGTTTTTAAACTCTTTGATGATGTTCTGTTTCATTTCATTTTTTGGAAATTTCTTTCTTTTTTTCTCTCAGTCTTGAGTACTCTGCGTTTGAAATCTTGGTGTTGTTGGCTGGCCTCATGCCGAATCCTGAAACAACTACTTCTCTCATTGCAATCTGGTAGGATTACCTATACTTTTTTCTCCCCTTCTATTTTTCCTAATTGTACCCGTATGACTAAAGATGGCTGTTGGGCCGGGCTTCAGACTTCGGGACGACACACCAAGCCCGCTTGTATCTGGCTGGGCCGGCCATCGTGCCTAAGCCTAACTTTATTGTGCTTTGTCATGCCAGGTCTTATCGTGCTTTTACCAATAAAAATCGGTCCCAGGCGCGGCCCACGACTTCGTGTCGGGCTTGGGGCCGACACACCAAGTCCATTTGTATCATGTTGGCCTGTCCGGTGTGCCTAAGCCTAATTTTATTGTGCTTTATCGTGTCGGGTCTTATCGTGCTTCTCCCAAAAAATGCAGCCCCAGGCTCGGCCCACGACTTTGTGCCCGTGTCGGCTCGTGCCTTGTTCTTGTCAGATCGGGCCTCTGGTCGGGCCGGCACACAACCTTCTTTACGTATGGCAAGATTTTTTTTGTTAAATTTGATTAATATATTAATTTGACATCTTCCTCTTACCAGTGTTAATACAGAATCAATTGCTTACATGTGTACTTACGGGTTGAGTGCTGCAGCAAGGTTTCTTTCTTCTTCATTTCCTCAACTTTTTCTTTGGGGCTTCTAATGTTATTTGATTACAGTTATTACTATTAAGAGTTAACTTTTCCATGATATAGTACAAGAGTTTCAAATGAGCTTGGAGCTGGGAAACCGAACCAAGCAAAACTAGAGCTGGCAAAAATTGACCCAACCCACCAACCCAACCCGAACCCAACCCAATAATAAAGGGTTGGGTCAAGATTTTCAACCCGTTTAATTAAATGGGTCAACCCAACCCAACCCGTTTAATTAAATGGGTTGGGTTAGGTTGAAATGTTCAACCCGAAAACAACCCGCCTAACCCGTTTAAGTTCAAGCAAGTATGTAATATAAATCTGTAGAATTTTATTTAAAATATTTTATTTCTCATTTTTCCTTCAAAAATGAATAATTATTTGACATTTTGATACATGTCAAATACATATTTAAGTATTACTTTTTTCTATGAGATATGCCACAAAAATATCACCTCGCGACTCTATAGTTAAGTCAATTTACACTTAAAAGTGAAAAAAAAAAAAATTAAACGGTTCAACTTCAGGTCAACCCGTTTATAATTGGGTTGGGTTGGGTTGAAAATTTCAACCCGTTTAATTAAACAGGTCGGGTTGGGTTGGGAAAATCTCAACCCGTTTATAAATGGGTCGACCTGATTTCGACCCAACCCAACCCATTGCCAGCTCTAAGCAAAACACGCAATGGGCGTAACATTAAAGTTGTCGGTTCTTCTATCCACTCTTGTTCTTCTTGCTTTAGGTTTGGGACATAA ATGAGAGGAGAAAATGGAAGAAAAATGTTGGAGAAGATGATGGATGTAAAAGAAGCCAAAAAGCAGATATTATTCTCATTGCCAATGATACTCACTAATGTGTTTTACAGTCTAATTCCGGTGGTTTCAGTTATGTTTGCCGGTCATCTCGGTCAGCTACAATTGGCTGGCTCTACTCTTGCCAATTCTTGGGCTACTGTCACTGGTTTTTCTTTCATGCTCGGCTTAAGTGGTGCACTCGAGACATTATGTGGACAAGGATTTGGTGCAAACTTGTACAAAATCCTAGGGATTTACCTCCAAGCATCATGTATAATCTCACTCCTTTTCTCCATAATCATATCCGTACTATGGTGGTTTACGGAACCCATCTTAAACTTACTCCATCAAACTCCTGATATTTCCAAAGAAGCAGCACTCTACATGAGATTTCTAATACCAGGAATATTCGCGTATGGCATCTTACAGAACATCTTAAGGTTCCTACAGACACAATCTGTTGTTTTTCCTTTAGTTGTGTTGTCTTTTGTTCCGTTGCTTTTGCATTGTGGCCTTAGCTATTTGCTGGTTCATTTCACAACCCTTGGTTATAAGGGAGCAGCATTGGCTACCTCTATAACGTTTTGGTTTTCAGTTATGATTTTGATTATATATGTGAATTACGCTAAGAAATTCGAGCATACTTGGAAAGGGTTATCGAAGGAAGCGTTTTGTCATGTCTTTGCCAACTTGAAATTGGCATTACCTTCTGCTGCTATGGTTTGTCTTGAGTACTCTGCGTTTGAAATCTTGGTGTTGTTGGCTGGCCTCATGCCGAATCCTGAAACAACTACTTCTCTCATTGCAATCTGTGTTAATACAGAATCAATTGCTTACATGTGTACTTACGGGTTGAGTGCTGCAGCAAGGTTTGGGACATAA ATGAGAGGAGAAAATGGAAGAAAAATGTTGGAGAAGATGATGGATGTAAAAGAAGCCAAAAAGCAGATATTATTCTCATTGCCAATGATACTCACTAATGTGTTTTACAGTCTAATTCCGGTGGTTTCAGTTATGTTTGCCGGTCATCTCGGTCAGCTACAATTGGCTGGCTCTACTCTTGCCAATTCTTGGGCTACTGTCACTGGTTTTTCTTTCATGCTCGGCTTAAGTGGTGCACTCGAGACATTATGTGGACAAGGATTTGGTGCAAACTTGTACAAAATCCTAGGGATTTACCTCCAAGCATCATGTATAATCTCACTCCTTTTCTCCATAATCATATCCGTACTATGGTGGTTTACGGAACCCATCTTAAACTTACTCCATCAAACTCCTGATATTTCCAAAGAAGCAGCACTCTACATGAGATTTCTAATACCAGGAATATTCGCGTATGGCATCTTACAGAACATCTTAAGGTTCCTACAGACACAATCTGTTGTTTTTCCTTTAGTTGTGTTGTCTTTTGTTCCGTTGCTTTTGCATTGTGGCCTTAGCTATTTGCTGGTTCATTTCACAACCCTTGGTTATAAGGGAGCAGCATTGGCTACCTCTATAACGTTTTGGTTTTCAGTTATGATTTTGATTATATATGTGAATTACGCTAAGAAATTCGAGCATACTTGGAAAGGGTTATCGAAGGAAGCGTTTTGTCATGTCTTTGCCAACTTGAAATTGGCATTACCTTCTGCTGCTATGGTTTGTCTTGAGTACTCTGCGTTTGAAATCTTGGTGTTGTTGGCTGGCCTCATGCCGAATCCTGAAACAACTACTTCTCTCATTGCAATCTGTGTTAATACAGAATCAATTGCTTACATGTGTACTTACGGGTTGAGTGCTGCAGCAAGGTTTGGGACATAA MRGENGRKMLEKMMDVKEAKKQILFSLPMILTNVFYSLIPVVSVMFAGHLGQLQLAGSTLANSWATVTGFSFMLGLSGALETLCGQGFGANLYKILGIYLQASCIISLLFSIIISVLWWFTEPILNLLHQTPDISKEAALYMRFLIPGIFAYGILQNILRFLQTQSVVFPLVVLSFVPLLLHCGLSYLLVHFTTLGYKGAALATSITFWFSVMILIIYVNYAKKFEHTWKGLSKEAFCHVFANLKLALPSAAMVCLEYSAFEILVLLAGLMPNPETTTSLIAICVNTESIAYMCTYGLSAAARFGT Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo18904.1 vs. NCBI nr
Match: gi|902183851|gb|KNA10185.1| (hypothetical protein SOVF_146690 isoform A [Spinacia oleracea]) HSP 1 Score: 586.3 bits (1510), Expect = 3.200e-164 Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 1
BLAST of Spo18904.1 vs. NCBI nr
Match: gi|902183852|gb|KNA10186.1| (hypothetical protein SOVF_146690 isoform B [Spinacia oleracea]) HSP 1 Score: 540.4 bits (1391), Expect = 2.000e-150 Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 1
BLAST of Spo18904.1 vs. NCBI nr
Match: gi|731329284|ref|XP_010675508.1| (PREDICTED: MATE efflux family protein ALF5-like isoform X3 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 466.5 bits (1199), Expect = 3.700e-128 Identity = 240/298 (80.54%), Postives = 273/298 (91.61%), Query Frame = 1
BLAST of Spo18904.1 vs. NCBI nr
Match: gi|731329280|ref|XP_010675506.1| (PREDICTED: MATE efflux family protein ALF5-like isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 466.5 bits (1199), Expect = 3.700e-128 Identity = 240/298 (80.54%), Postives = 273/298 (91.61%), Query Frame = 1
BLAST of Spo18904.1 vs. NCBI nr
Match: gi|902174031|gb|KNA08349.1| (hypothetical protein SOVF_163430 [Spinacia oleracea]) HSP 1 Score: 461.1 bits (1185), Expect = 1.500e-126 Identity = 231/291 (79.38%), Postives = 267/291 (91.75%), Query Frame = 1
BLAST of Spo18904.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSG9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_146690 PE=4 SV=1) HSP 1 Score: 586.3 bits (1510), Expect = 2.200e-164 Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 1
BLAST of Spo18904.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QUM4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_146690 PE=4 SV=1) HSP 1 Score: 540.4 bits (1391), Expect = 1.400e-150 Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 1
BLAST of Spo18904.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QM64_SPIOL (Protein DETOXIFICATION OS=Spinacia oleracea GN=SOVF_163430 PE=3 SV=1) HSP 1 Score: 461.1 bits (1185), Expect = 1.100e-126 Identity = 231/291 (79.38%), Postives = 267/291 (91.75%), Query Frame = 1
BLAST of Spo18904.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ERP4_BETVU (Protein DETOXIFICATION OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g166070 PE=3 SV=1) HSP 1 Score: 426.8 bits (1096), Expect = 2.200e-116 Identity = 224/302 (74.17%), Postives = 258/302 (85.43%), Query Frame = 1
BLAST of Spo18904.1 vs. UniProtKB/TrEMBL
Match: F6H231_VITVI (Protein DETOXIFICATION OS=Vitis vinifera GN=VIT_19s0014g02450 PE=3 SV=1) HSP 1 Score: 424.1 bits (1089), Expect = 1.500e-115 Identity = 214/292 (73.29%), Postives = 256/292 (87.67%), Query Frame = 1
BLAST of Spo18904.1 vs. ExPASy Swiss-Prot
Match: DTX19_ARATH (Protein DETOXIFICATION 19 OS=Arabidopsis thaliana GN=DTX19 PE=2 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 4.100e-103 Identity = 191/303 (63.04%), Postives = 247/303 (81.52%), Query Frame = 1
BLAST of Spo18904.1 vs. ExPASy Swiss-Prot
Match: DTX18_ARATH (Protein DETOXIFICATION 18 OS=Arabidopsis thaliana GN=DTX18 PE=2 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 3.500e-102 Identity = 195/303 (64.36%), Postives = 242/303 (79.87%), Query Frame = 1
BLAST of Spo18904.1 vs. ExPASy Swiss-Prot
Match: DTX17_ARATH (Protein DETOXIFICATION 17 OS=Arabidopsis thaliana GN=DTX17 PE=2 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 1.800e-66 Identity = 136/286 (47.55%), Postives = 195/286 (68.18%), Query Frame = 1
BLAST of Spo18904.1 vs. ExPASy Swiss-Prot
Match: DTX16_ARATH (Protein DETOXIFICATION 16 OS=Arabidopsis thaliana GN=DTX16 PE=2 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 8.300e-64 Identity = 137/292 (46.92%), Postives = 194/292 (66.44%), Query Frame = 1
BLAST of Spo18904.1 vs. ExPASy Swiss-Prot
Match: DTX9_ARATH (Protein DETOXIFICATION 9 OS=Arabidopsis thaliana GN=DTX9 PE=2 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 2.400e-55 Identity = 116/286 (40.56%), Postives = 176/286 (61.54%), Query Frame = 1
BLAST of Spo18904.1 vs. TAIR (Arabidopsis)
Match: AT3G23560.1 (MATE efflux family protein) HSP 1 Score: 375.9 bits (964), Expect = 2.300e-104 Identity = 191/303 (63.04%), Postives = 247/303 (81.52%), Query Frame = 1
BLAST of Spo18904.1 vs. TAIR (Arabidopsis)
Match: AT3G23550.1 (MATE efflux family protein) HSP 1 Score: 372.9 bits (956), Expect = 1.900e-103 Identity = 195/303 (64.36%), Postives = 242/303 (79.87%), Query Frame = 1
BLAST of Spo18904.1 vs. TAIR (Arabidopsis)
Match: AT1G73700.1 (MATE efflux family protein) HSP 1 Score: 254.2 bits (648), Expect = 1.000e-67 Identity = 136/286 (47.55%), Postives = 195/286 (68.18%), Query Frame = 1
BLAST of Spo18904.1 vs. TAIR (Arabidopsis)
Match: AT5G52450.1 (MATE efflux family protein) HSP 1 Score: 245.4 bits (625), Expect = 4.700e-65 Identity = 137/292 (46.92%), Postives = 194/292 (66.44%), Query Frame = 1
BLAST of Spo18904.1 vs. TAIR (Arabidopsis)
Match: AT1G66760.2 (MATE efflux family protein) HSP 1 Score: 217.2 bits (552), Expect = 1.400e-56 Identity = 116/286 (40.56%), Postives = 176/286 (61.54%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo18904.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo18904.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo18904.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo18904.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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