Spo18906 (gene)

Overview
NameSpo18906
Typegene
OrganismSpinacia oleracea (Spinach)
Description(Leucine-rich repeat/receptor protein kinase) (Precursor)
LocationSpoScf_00622 : 308559 .. 309719 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATCATGCCACGTCACACATGCGGCATATTTTAAAGGTTGTAAGTTACGACCTTTATCACGTTTGTAGCAAAAATTAATGTCACCCCTTAAGCCTGTCATCTGTTCACAATTCATATACTACGTACTTGTATATCATTTCTTTTAATTGATTATTACGAGTTTTAATGTAATTTTAAATATGAACAAATGAGTTTGAAAAAGTGACACACAAGTAGTCCGTAATACTTCCTCCGTTCCGAAAATATCGCACCATTTGTTTTTTACACTATTCACACTAAGACTTTTGCCATTTTTTATAATTCGCACGTAAGGAAATTTTAGCCATTTGGAGTCATGTTAGACTCGTATCGATACATATTTTCTAGATATTATTTTTTTATAATTTTTATTTGCATACAATTTGAGATATTAAGAGTCAAAATAATGATTAGAGGAGTAAAAGTCAACCATGATGCGATATTTCTGAAACGGATGAAGTATACAAATTGCGAAGGATTTTGACTAGTGGCAAAAAGAGATAAGATAAGGTTTGGCATCCTATAACATCAATAAAAATAGACATCCACAAACAACTCTTGAAGTTCTGAGTTGATTTTTACAATCACAATGCCGACACTTACAAAATCACCTATCCTTGTATACTTGAGTCTTCTTCTGAGGCTCTCTGCCTCTCTTCCTTGTTTTCATCGCATCTGGAGATCTTTCAGGCACTATACCTTCTGAGGTAGGTGACCTGCCTTTCGTCGCCTATTTAGTTTTAGCAGATAACATCAATGTCACAGGGACTATTCCTAAATCCATTAGCAAACTCAAGTATCTTTTTCACCTTGATCTTGGGCGTAACAGCTTAACCGGTCCTATTCCTAATGAGCTGTTCAAGTTGAAGAAGCTCAAGGAAGTTGATCTCTCTGTAAATCATTTGTCAGGGGCTATTCCACCGTCTATCTTGTCATTGTCTTCTCTCTCGCAATTCAACATCTCTCACAACAACTTCACCGATCTTATACCTTCATTGCCGAAAAGCTTGAAGAGTATTGATGTGAGTTACAACCAACTTTGCGGCCCCGTCCCTAGTGGGTTGAAGGGGTTTGGAAGGGCTAATTTTGAACATAATAAATGTCTTTGTGGTCCTCCTTTGCTTCAAGGTTGCAAGTAA

mRNA sequence

ATGTCATCATGCCACGTCACACATGCGGCATATTTTAAAGGTTGCTCTCTGCCTCTCTTCCTTGTTTTCATCGCATCTGGAGATCTTTCAGGCACTATACCTTCTGAGGTAGGTGACCTGCCTTTCGTCGCCTATTTAGTTTTAGCAGATAACATCAATGTCACAGGGACTATTCCTAAATCCATTAGCAAACTCAAGTATCTTTTTCACCTTGATCTTGGGCGTAACAGCTTAACCGGTCCTATTCCTAATGAGCTGTTCAAGTTGAAGAAGCTCAAGGAAGTTGATCTCTCTGTAAATCATTTGTCAGGGGCTATTCCACCGTCTATCTTGTCATTGTCTTCTCTCTCGCAATTCAACATCTCTCACAACAACTTCACCGATCTTATACCTTCATTGCCGAAAAGCTTGAAGAGTATTGATGTGAGTTACAACCAACTTTGCGGCCCCGTCCCTAGTGGGTTGAAGGGGTTTGGAAGGGCTAATTTTGAACATAATAAATGTCTTTGTGGTCCTCCTTTGCTTCAAGGTTGCAAGTAA

Coding sequence (CDS)

ATGTCATCATGCCACGTCACACATGCGGCATATTTTAAAGGTTGCTCTCTGCCTCTCTTCCTTGTTTTCATCGCATCTGGAGATCTTTCAGGCACTATACCTTCTGAGGTAGGTGACCTGCCTTTCGTCGCCTATTTAGTTTTAGCAGATAACATCAATGTCACAGGGACTATTCCTAAATCCATTAGCAAACTCAAGTATCTTTTTCACCTTGATCTTGGGCGTAACAGCTTAACCGGTCCTATTCCTAATGAGCTGTTCAAGTTGAAGAAGCTCAAGGAAGTTGATCTCTCTGTAAATCATTTGTCAGGGGCTATTCCACCGTCTATCTTGTCATTGTCTTCTCTCTCGCAATTCAACATCTCTCACAACAACTTCACCGATCTTATACCTTCATTGCCGAAAAGCTTGAAGAGTATTGATGTGAGTTACAACCAACTTTGCGGCCCCGTCCCTAGTGGGTTGAAGGGGTTTGGAAGGGCTAATTTTGAACATAATAAATGTCTTTGTGGTCCTCCTTTGCTTCAAGGTTGCAAGTAA

Protein sequence

MSSCHVTHAAYFKGCSLPLFLVFIASGDLSGTIPSEVGDLPFVAYLVLADNINVTGTIPKSISKLKYLFHLDLGRNSLTGPIPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFNISHNNFTDLIPSLPKSLKSIDVSYNQLCGPVPSGLKGFGRANFEHNKCLCGPPLLQGCK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo18906.1Spo18906.1mRNA


Homology
[Close]
BLAST of Spo18906.1 vs. NCBI nr
Match: gi|902222446|gb|KNA19172.1| (hypothetical protein SOVF_064000, partial [Spinacia oleracea])

HSP 1 Score: 323.2 bits (827), Expect = 2.900e-85
Identity = 161/178 (90.45%), Postives = 161/178 (90.45%), Query Frame = 1 

		  

Query: 1   MSSCHVTHAAYFKGCSLPLFLVFIASGDLSGTIPSEVGDLPFVAYLVLADNINVTGTIPK 60
           MSSCHVTHAAYFKG                 TIPSEVGDLPFVAYLVLADNINVTGTIPK
Sbjct: 1   MSSCHVTHAAYFKG----------------RTIPSEVGDLPFVAYLVLADNINVTGTIPK 60

Query: 61  SISKLKYLFHLDLGRNSLTGPIPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFN 120
           SISKLKYLFHLDLGRNSLTGPIPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFN
Sbjct: 61  SISKLKYLFHLDLGRNSLTGPIPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFN 120

Query: 121 ISHNNFTDLIPSLPKSLKSIDVSYNQLCGPVPSGLKGFGRANFEHNKCLCGPPLLQGC 179
           ISHNNFTDLIPSLPKSLKSIDVSYNQLCGPVPSGLKGFGRANFEHNKCLCGPPLLQGC
Sbjct: 121 ISHNNFTDLIPSLPKSLKSIDVSYNQLCGPVPSGLKGFGRANFEHNKCLCGPPLLQGC 162
[Close]
BLAST of Spo18906.1 vs. NCBI nr
Match: gi|902210175|gb|KNA16365.1| (hypothetical protein SOVF_089600 [Spinacia oleracea])

HSP 1 Score: 244.2 bits (622), Expect = 1.700e-61
Identity = 115/160 (71.88%), Postives = 137/160 (85.62%), Query Frame = 1 

		  

Query: 21  LVFIASGDLSGTIPSEVGDLPFVAYLVLADNINVTGTIPKSISKLKYLFHLDLGRNSLTG 80
           + F  S  LSGTIPS++GDLPF+++ +LADNINVTGTIPKS+ KLK L+HL+L  NSLTG
Sbjct: 87  VTFSRSWGLSGTIPSDLGDLPFLSFFILADNINVTGTIPKSLGKLKNLYHLELDTNSLTG 146

Query: 81  PIPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFNISHNNFTDLIPSLPKSLKSI 140
           PIPNELFKLKKLK VDLS N LSGAIPPS+ SLSSLS+FN++HN  +  IP LPKSLK +
Sbjct: 147 PIPNELFKLKKLKVVDLSGNQLSGAIPPSVSSLSSLSEFNVNHNKLSGSIPPLPKSLKKV 206

Query: 141 DVSYNQLCGPVPSGLKGFGRANFEHNKCLCGPPLL-QGCK 180
           D+SYNQLCGP+PSGLKGF  A+F++NKCLCGPPL+ QGCK
Sbjct: 207 DLSYNQLCGPIPSGLKGFSPASFKNNKCLCGPPLVAQGCK 246
[Close]
BLAST of Spo18906.1 vs. NCBI nr
Match: gi|731323972|ref|XP_010672716.1| (PREDICTED: polygalacturonase inhibitor 1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 226.9 bits (577), Expect = 2.900e-56
Identity = 108/159 (67.92%), Postives = 127/159 (79.87%), Query Frame = 1 

		  

Query: 21  LVFIASGDLSGTIPSEVGDLPFVAYLVLADNINVTGTIPKSISKLKYLFHLDLGRNSLTG 80
           + F  S  LSGTIPS+ G+LPF+++ +LADNI+V GTIPKS++KLK L+HLDLG NSLTG
Sbjct: 85  VTFSRSWGLSGTIPSDFGNLPFLSFFILADNIDVKGTIPKSLAKLKKLYHLDLGMNSLTG 144

Query: 81  PIPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFNISHNNFTDLIPSLPKSLKSI 140
           PIP E+FKLK LK VDLS NHLSG IP S+ +LSSLS+FN+SHN  T  +P L KSLKS+
Sbjct: 145 PIPEEIFKLKSLKVVDLSSNHLSGVIPSSVSALSSLSEFNVSHNKLTGSLPPLSKSLKSL 204

Query: 141 DVSYNQLCGPVPSGLKGFGRANFEHNKCLCGPPLLQGCK 180
           DVSYNQLCG +PSGLK F R  F HNKCLCGPP L  CK
Sbjct: 205 DVSYNQLCGAIPSGLKRFSRGRFAHNKCLCGPP-LAACK 242
[Close]
BLAST of Spo18906.1 vs. NCBI nr
Match: gi|731323966|ref|XP_010672713.1| (PREDICTED: polygalacturonase inhibitor 2-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 226.9 bits (577), Expect = 2.900e-56
Identity = 106/154 (68.83%), Postives = 126/154 (81.82%), Query Frame = 1 

		  

Query: 21  LVFIASGDLSGTIPSEVGDLPFVAYLVLADNINVTGTIPKSISKLKYLFHLDLGRNSLTG 80
           + F  S  LSGTIPS+ G+LP++++  LADNINVTGTIPKS++KLK L+HLDLG NSLTG
Sbjct: 86  VTFSRSWGLSGTIPSDFGNLPYLSFFTLADNINVTGTIPKSLTKLKKLYHLDLGMNSLTG 145

Query: 81  PIPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFNISHNNFTDLIPSLPKSLKSI 140
           PIP ELFKLKKLK VDLS NHLSG IP S+ +L SLS+FN+S N  T  +P+L KSL S+
Sbjct: 146 PIPEELFKLKKLKVVDLSANHLSGVIPSSVSALPSLSEFNVSRNKLTGSLPTLSKSLTSL 205

Query: 141 DVSYNQLCGPVPSGLKGFGRANFEHNKCLCGPPL 175
           DVSYN LCG +P+GLK FGR +FEHNKCLCGPPL
Sbjct: 206 DVSYNDLCGSIPNGLKRFGRKSFEHNKCLCGPPL 239
[Close]
BLAST of Spo18906.1 vs. NCBI nr
Match: gi|731323968|ref|XP_010672714.1| (PREDICTED: polygalacturonase inhibitor 1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 223.4 bits (568), Expect = 3.200e-55
Identity = 105/154 (68.18%), Postives = 126/154 (81.82%), Query Frame = 1 

		  

Query: 21  LVFIASGDLSGTIPSEVGDLPFVAYLVLADNINVTGTIPKSISKLKYLFHLDLGRNSLTG 80
           + F  S  LSGTIPS+ G+LP++++  LADNINVTGTIPKS++KLK L+HLDLG NSLTG
Sbjct: 86  VTFSRSWGLSGTIPSDFGNLPYLSFFTLADNINVTGTIPKSLTKLKKLYHLDLGMNSLTG 145

Query: 81  PIPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFNISHNNFTDLIPSLPKSLKSI 140
           PIP ELF+LKKLK VDLS N LSG IP S+ +L SLS+FN+S N  T  +P+L KSLKS+
Sbjct: 146 PIPKELFQLKKLKVVDLSANLLSGVIPSSVSALPSLSEFNVSRNKLTGSLPALSKSLKSL 205

Query: 141 DVSYNQLCGPVPSGLKGFGRANFEHNKCLCGPPL 175
           DVSYN LCG +P+GLK FGR +FEHNKCLCGPPL
Sbjct: 206 DVSYNDLCGSIPNGLKRFGRKSFEHNKCLCGPPL 239
[Close]
BLAST of Spo18906.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RK06_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_064000 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.000e-85
Identity = 161/178 (90.45%), Postives = 161/178 (90.45%), Query Frame = 1 

		  

Query: 1   MSSCHVTHAAYFKGCSLPLFLVFIASGDLSGTIPSEVGDLPFVAYLVLADNINVTGTIPK 60
           MSSCHVTHAAYFKG                 TIPSEVGDLPFVAYLVLADNINVTGTIPK
Sbjct: 1   MSSCHVTHAAYFKG----------------RTIPSEVGDLPFVAYLVLADNINVTGTIPK 60

Query: 61  SISKLKYLFHLDLGRNSLTGPIPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFN 120
           SISKLKYLFHLDLGRNSLTGPIPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFN
Sbjct: 61  SISKLKYLFHLDLGRNSLTGPIPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFN 120

Query: 121 ISHNNFTDLIPSLPKSLKSIDVSYNQLCGPVPSGLKGFGRANFEHNKCLCGPPLLQGC 179
           ISHNNFTDLIPSLPKSLKSIDVSYNQLCGPVPSGLKGFGRANFEHNKCLCGPPLLQGC
Sbjct: 121 ISHNNFTDLIPSLPKSLKSIDVSYNQLCGPVPSGLKGFGRANFEHNKCLCGPPLLQGC 162
[Close]
BLAST of Spo18906.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RA49_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_089600 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.200e-61
Identity = 115/160 (71.88%), Postives = 137/160 (85.62%), Query Frame = 1 

		  

Query: 21  LVFIASGDLSGTIPSEVGDLPFVAYLVLADNINVTGTIPKSISKLKYLFHLDLGRNSLTG 80
           + F  S  LSGTIPS++GDLPF+++ +LADNINVTGTIPKS+ KLK L+HL+L  NSLTG
Sbjct: 87  VTFSRSWGLSGTIPSDLGDLPFLSFFILADNINVTGTIPKSLGKLKNLYHLELDTNSLTG 146

Query: 81  PIPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFNISHNNFTDLIPSLPKSLKSI 140
           PIPNELFKLKKLK VDLS N LSGAIPPS+ SLSSLS+FN++HN  +  IP LPKSLK +
Sbjct: 147 PIPNELFKLKKLKVVDLSGNQLSGAIPPSVSSLSSLSEFNVNHNKLSGSIPPLPKSLKKV 206

Query: 141 DVSYNQLCGPVPSGLKGFGRANFEHNKCLCGPPLL-QGCK 180
           D+SYNQLCGP+PSGLKGF  A+F++NKCLCGPPL+ QGCK
Sbjct: 207 DLSYNQLCGPIPSGLKGFSPASFKNNKCLCGPPLVAQGCK 246
[Close]
BLAST of Spo18906.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CTI5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g060740 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.000e-56
Identity = 106/154 (68.83%), Postives = 126/154 (81.82%), Query Frame = 1 

		  

Query: 21  LVFIASGDLSGTIPSEVGDLPFVAYLVLADNINVTGTIPKSISKLKYLFHLDLGRNSLTG 80
           + F  S  LSGTIPS+ G+LP++++  LADNINVTGTIPKS++KLK L+HLDLG NSLTG
Sbjct: 86  VTFSRSWGLSGTIPSDFGNLPYLSFFTLADNINVTGTIPKSLTKLKKLYHLDLGMNSLTG 145

Query: 81  PIPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFNISHNNFTDLIPSLPKSLKSI 140
           PIP ELFKLKKLK VDLS NHLSG IP S+ +L SLS+FN+S N  T  +P+L KSL S+
Sbjct: 146 PIPEELFKLKKLKVVDLSANHLSGVIPSSVSALPSLSEFNVSRNKLTGSLPTLSKSLTSL 205

Query: 141 DVSYNQLCGPVPSGLKGFGRANFEHNKCLCGPPL 175
           DVSYN LCG +P+GLK FGR +FEHNKCLCGPPL
Sbjct: 206 DVSYNDLCGSIPNGLKRFGRKSFEHNKCLCGPPL 239
[Close]
BLAST of Spo18906.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CPC2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g060770 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.000e-56
Identity = 108/159 (67.92%), Postives = 127/159 (79.87%), Query Frame = 1 

		  

Query: 21  LVFIASGDLSGTIPSEVGDLPFVAYLVLADNINVTGTIPKSISKLKYLFHLDLGRNSLTG 80
           + F  S  LSGTIPS+ G+LPF+++ +LADNI+V GTIPKS++KLK L+HLDLG NSLTG
Sbjct: 85  VTFSRSWGLSGTIPSDFGNLPFLSFFILADNIDVKGTIPKSLAKLKKLYHLDLGMNSLTG 144

Query: 81  PIPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFNISHNNFTDLIPSLPKSLKSI 140
           PIP E+FKLK LK VDLS NHLSG IP S+ +LSSLS+FN+SHN  T  +P L KSLKS+
Sbjct: 145 PIPEEIFKLKSLKVVDLSSNHLSGVIPSSVSALSSLSEFNVSHNKLTGSLPPLSKSLKSL 204

Query: 141 DVSYNQLCGPVPSGLKGFGRANFEHNKCLCGPPLLQGCK 180
           DVSYNQLCG +PSGLK F R  F HNKCLCGPP L  CK
Sbjct: 205 DVSYNQLCGAIPSGLKRFSRGRFAHNKCLCGPP-LAACK 242
[Close]
BLAST of Spo18906.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CNN5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g060750 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.200e-55
Identity = 105/154 (68.18%), Postives = 126/154 (81.82%), Query Frame = 1 

		  

Query: 21  LVFIASGDLSGTIPSEVGDLPFVAYLVLADNINVTGTIPKSISKLKYLFHLDLGRNSLTG 80
           + F  S  LSGTIPS+ G+LP++++  LADNINVTGTIPKS++KLK L+HLDLG NSLTG
Sbjct: 86  VTFSRSWGLSGTIPSDFGNLPYLSFFTLADNINVTGTIPKSLTKLKKLYHLDLGMNSLTG 145

Query: 81  PIPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFNISHNNFTDLIPSLPKSLKSI 140
           PIP ELF+LKKLK VDLS N LSG IP S+ +L SLS+FN+S N  T  +P+L KSLKS+
Sbjct: 146 PIPKELFQLKKLKVVDLSANLLSGVIPSSVSALPSLSEFNVSRNKLTGSLPALSKSLKSL 205

Query: 141 DVSYNQLCGPVPSGLKGFGRANFEHNKCLCGPPL 175
           DVSYN LCG +P+GLK FGR +FEHNKCLCGPPL
Sbjct: 206 DVSYNDLCGSIPNGLKRFGRKSFEHNKCLCGPPL 239
[Close]
BLAST of Spo18906.1 vs. ExPASy Swiss-Prot
Match: PGIP1_ARATH (Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana GN=PGIP1 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.500e-25
Identity = 65/150 (43.33%), Postives = 91/150 (60.67%), Query Frame = 1 

		  

Query: 24  IASGDLSGTIPSEVGDLPFVAYLVLADNINVTGTIPKSISKLKYLFHLDLGRNSLTGPIP 83
           I SG +SG IP+EVGDLP++  LV     N+TGTI  +I+KLK L  L L   +LTGPIP
Sbjct: 77  IFSGQISGQIPAEVGDLPYLETLVFRKLSNLTGTIQPTIAKLKNLRMLRLSWTNLTGPIP 136

Query: 84  NELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFNISHNNFTDLIP----SLPKSLKS 143
           + + +LK L+ ++LS N LSG+IP S+ +L  +    +S N  T  IP    S P ++  
Sbjct: 137 DFISQLKNLEFLELSFNDLSGSIPSSLSTLPKILALELSRNKLTGSIPESFGSFPGTVPD 196

Query: 144 IDVSYNQLCGPVPSGLKG--FGRANFEHNK 168
           + +S+NQL GP+P  L    F R +   NK
Sbjct: 197 LRLSHNQLSGPIPKSLGNIDFNRIDLSRNK 226
[Close]
BLAST of Spo18906.1 vs. ExPASy Swiss-Prot
Match: FON1_ORYSJ (Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 OS=Oryza sativa subsp. japonica GN=FON1 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.700e-24
Identity = 67/165 (40.61%), Postives = 91/165 (55.15%), Query Frame = 1 

		  

Query: 21  LVFIASGDLSGTIPSEVGDLPFVAYLVLADNINVTGTIPKSISKLKYLFHLDLGRNSLTG 80
           ++ + +  + G IP  +G+LP +  L L  N N +G +P  I  LK L  L++  N+LTG
Sbjct: 464 MLLLGNNGIGGRIPPAIGNLPALQTLSLESN-NFSGALPPEIGNLKNLSRLNVSGNALTG 523

Query: 81  PIPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFNISHNNFTDLIP---SLPKSL 140
            IP+EL +   L  VDLS N  SG IP SI SL  L   N+S N  T  +P   S   SL
Sbjct: 524 AIPDELIRCASLAAVDLSRNGFSGEIPESITSLKILCTLNVSRNRLTGELPPEMSNMTSL 583

Query: 141 KSIDVSYNQLCGPVPSGLKG----FGRANFEHNKCLCGPPLLQGC 179
            ++DVSYN L GPVP  ++G    F  ++F  N  LCG P+   C
Sbjct: 584 TTLDVSYNSLSGPVP--MQGQFLVFNESSFVGNPGLCGGPVADAC 625
[Close]
BLAST of Spo18906.1 vs. ExPASy Swiss-Prot
Match: PGIP2_ARATH (Polygalacturonase inhibitor 2 OS=Arabidopsis thaliana GN=PGIP2 PE=2 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 2.900e-24
Identity = 66/164 (40.24%), Postives = 91/164 (55.49%), Query Frame = 1 

		  

Query: 22  VFIASGDLSGTIPSEVGDLPFVAYLVLADNINVTGTIPKSISKLKYLFHLDLGRNSLTGP 81
           + I  G++SG IP EVGDLP++  L+     N+TG I  +I+KLK L  L L   +LTGP
Sbjct: 75  LIIQDGEISGQIPPEVGDLPYLTSLIFRKLTNLTGHIQPTIAKLKNLTFLRLSWTNLTGP 134

Query: 82  IPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFNISHNNFTDLIP----SLPKSL 141
           +P  L +LK L+ +DLS N LSG+IP S+ SL  L    +S N  T  IP    +    +
Sbjct: 135 VPEFLSQLKNLEYIDLSFNDLSGSIPSSLSSLRKLEYLELSRNKLTGPIPESFGTFSGKV 194

Query: 142 KSIDVSYNQLCGPVPSGL--KGFGRANFEHNKCLCGPPLLQGCK 180
            S+ +S+NQL G +P  L    F R +   NK      +L G K
Sbjct: 195 PSLFLSHNQLSGTIPKSLGNPDFYRIDLSRNKLQGDASILFGAK 238
[Close]
BLAST of Spo18906.1 vs. ExPASy Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 9.300e-23
Identity = 59/165 (35.76%), Postives = 94/165 (56.97%), Query Frame = 1 

		  

Query: 19  LFLVFIASGDLSGTIPSEVGDLPFVAYLVLADNINVTGTIPKSISKLKYLFHLDLGRNSL 78
           L ++ + +  + G IP ++G L F+  L L  N+N+ G +P+ IS  + L  LD+  N L
Sbjct: 334 LSVIRLGNNSIDGVIPRDIGSLEFLQVLNL-HNLNLIGEVPEDISNCRVLLELDVSGNDL 393

Query: 79  TGPIPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFNISHNNFTDLIPSLPKSLK 138
            G I  +L  L  +K +DL  N L+G+IPP + +LS +   ++S N+ +  IPS   SL 
Sbjct: 394 EGKISKKLLNLTNIKILDLHRNRLNGSIPPELGNLSKVQFLDLSQNSLSGPIPSSLGSLN 453

Query: 139 SI---DVSYNQLCGPVP--SGLKGFGRANFEHNKCLCGPPLLQGC 179
           ++   +VSYN L G +P    ++ FG + F +N  LCG PL+  C
Sbjct: 454 TLTHFNVSYNNLSGVIPPVPMIQAFGSSAFSNNPFLCGDPLVTPC 497
[Close]
BLAST of Spo18906.1 vs. ExPASy Swiss-Prot
Match: IMK2_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.700e-22
Identity = 67/154 (43.51%), Postives = 91/154 (59.09%), Query Frame = 1 

		  

Query: 22  VFIASGDLSGTIPSEVGDLPFVAYLVLADNINVTGTIPKSISKLKYLFHLDLGRNSLTGP 81
           V I+   LSG+IP E G LP +  L  + N ++ GTIP S S L  L  L+L  N L GP
Sbjct: 268 VSISHNQLSGSIPRECGGLPHLQSLDFSYN-SINGTIPDSFSNLSSLVSLNLESNHLKGP 327

Query: 82  IPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFNISHNNFTDLIP-SLP--KSLK 141
           IP+ + +L  L E++L  N ++G IP +I ++S + + ++S NNFT  IP SL     L 
Sbjct: 328 IPDAIDRLHNLTELNLKRNKINGPIPETIGNISGIKKLDLSENNFTGPIPLSLVHLAKLS 387

Query: 142 SIDVSYNQLCGPVPSGL-KGFGRANFEHNKCLCG 172
           S +VSYN L GPVP  L K F  ++F  N  LCG
Sbjct: 388 SFNVSYNTLSGPVPPVLSKKFNSSSFLGNIQLCG 420
[Close]
BLAST of Spo18906.1 vs. TAIR (Arabidopsis)
Match: AT5G06860.1 (polygalacturonase inhibiting protein 1)

HSP 1 Score: 115.9 bits (289), Expect = 2.500e-26
Identity = 65/150 (43.33%), Postives = 91/150 (60.67%), Query Frame = 1 

		  

Query: 24  IASGDLSGTIPSEVGDLPFVAYLVLADNINVTGTIPKSISKLKYLFHLDLGRNSLTGPIP 83
           I SG +SG IP+EVGDLP++  LV     N+TGTI  +I+KLK L  L L   +LTGPIP
Sbjct: 77  IFSGQISGQIPAEVGDLPYLETLVFRKLSNLTGTIQPTIAKLKNLRMLRLSWTNLTGPIP 136

Query: 84  NELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFNISHNNFTDLIP----SLPKSLKS 143
           + + +LK L+ ++LS N LSG+IP S+ +L  +    +S N  T  IP    S P ++  
Sbjct: 137 DFISQLKNLEFLELSFNDLSGSIPSSLSTLPKILALELSRNKLTGSIPESFGSFPGTVPD 196

Query: 144 IDVSYNQLCGPVPSGLKG--FGRANFEHNK 168
           + +S+NQL GP+P  L    F R +   NK
Sbjct: 197 LRLSHNQLSGPIPKSLGNIDFNRIDLSRNK 226
[Close]
BLAST of Spo18906.1 vs. TAIR (Arabidopsis)
Match: AT5G06870.1 (polygalacturonase inhibiting protein 2)

HSP 1 Score: 113.2 bits (282), Expect = 1.600e-25
Identity = 66/164 (40.24%), Postives = 91/164 (55.49%), Query Frame = 1 

		  

Query: 22  VFIASGDLSGTIPSEVGDLPFVAYLVLADNINVTGTIPKSISKLKYLFHLDLGRNSLTGP 81
           + I  G++SG IP EVGDLP++  L+     N+TG I  +I+KLK L  L L   +LTGP
Sbjct: 75  LIIQDGEISGQIPPEVGDLPYLTSLIFRKLTNLTGHIQPTIAKLKNLTFLRLSWTNLTGP 134

Query: 82  IPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFNISHNNFTDLIP----SLPKSL 141
           +P  L +LK L+ +DLS N LSG+IP S+ SL  L    +S N  T  IP    +    +
Sbjct: 135 VPEFLSQLKNLEYIDLSFNDLSGSIPSSLSSLRKLEYLELSRNKLTGPIPESFGTFSGKV 194

Query: 142 KSIDVSYNQLCGPVPSGL--KGFGRANFEHNKCLCGPPLLQGCK 180
            S+ +S+NQL G +P  L    F R +   NK      +L G K
Sbjct: 195 PSLFLSHNQLSGTIPKSLGNPDFYRIDLSRNKLQGDASILFGAK 238
[Close]
BLAST of Spo18906.1 vs. TAIR (Arabidopsis)
Match: AT1G12460.1 (Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 108.2 bits (269), Expect = 5.200e-24
Identity = 59/165 (35.76%), Postives = 94/165 (56.97%), Query Frame = 1 

		  

Query: 19  LFLVFIASGDLSGTIPSEVGDLPFVAYLVLADNINVTGTIPKSISKLKYLFHLDLGRNSL 78
           L ++ + +  + G IP ++G L F+  L L  N+N+ G +P+ IS  + L  LD+  N L
Sbjct: 334 LSVIRLGNNSIDGVIPRDIGSLEFLQVLNL-HNLNLIGEVPEDISNCRVLLELDVSGNDL 393

Query: 79  TGPIPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFNISHNNFTDLIPSLPKSLK 138
            G I  +L  L  +K +DL  N L+G+IPP + +LS +   ++S N+ +  IPS   SL 
Sbjct: 394 EGKISKKLLNLTNIKILDLHRNRLNGSIPPELGNLSKVQFLDLSQNSLSGPIPSSLGSLN 453

Query: 139 SI---DVSYNQLCGPVP--SGLKGFGRANFEHNKCLCGPPLLQGC 179
           ++   +VSYN L G +P    ++ FG + F +N  LCG PL+  C
Sbjct: 454 TLTHFNVSYNNLSGVIPPVPMIQAFGSSAFSNNPFLCGDPLVTPC 497
[Close]
BLAST of Spo18906.1 vs. TAIR (Arabidopsis)
Match: AT3G51740.1 (inflorescence meristem receptor-like kinase 2)

HSP 1 Score: 106.7 bits (265), Expect = 1.500e-23
Identity = 67/154 (43.51%), Postives = 91/154 (59.09%), Query Frame = 1 

		  

Query: 22  VFIASGDLSGTIPSEVGDLPFVAYLVLADNINVTGTIPKSISKLKYLFHLDLGRNSLTGP 81
           V I+   LSG+IP E G LP +  L  + N ++ GTIP S S L  L  L+L  N L GP
Sbjct: 268 VSISHNQLSGSIPRECGGLPHLQSLDFSYN-SINGTIPDSFSNLSSLVSLNLESNHLKGP 327

Query: 82  IPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFNISHNNFTDLIP-SLP--KSLK 141
           IP+ + +L  L E++L  N ++G IP +I ++S + + ++S NNFT  IP SL     L 
Sbjct: 328 IPDAIDRLHNLTELNLKRNKINGPIPETIGNISGIKKLDLSENNFTGPIPLSLVHLAKLS 387

Query: 142 SIDVSYNQLCGPVPSGL-KGFGRANFEHNKCLCG 172
           S +VSYN L GPVP  L K F  ++F  N  LCG
Sbjct: 388 SFNVSYNTLSGPVPPVLSKKFNSSSFLGNIQLCG 420
[Close]
BLAST of Spo18906.1 vs. TAIR (Arabidopsis)
Match: AT1G62950.1 (leucine-rich repeat transmembrane protein kinase family protein)

HSP 1 Score: 105.1 bits (261), Expect = 4.400e-23
Identity = 59/163 (36.20%), Postives = 93/163 (57.06%), Query Frame = 1 

		  

Query: 19  LFLVFIASGDLSGTIPSEVGDLPFVAYLVLADNINVTGTIPKSISKLKYLFHLDLGRNSL 78
           L ++ +    + G +P E+G+L ++  L L  N+N+ G IP+ +S  + L  LD+  N L
Sbjct: 339 LSVIRLGDNFIDGKLPLELGNLEYLQVLNL-HNLNLVGEIPEDLSNCRLLLELDVSGNGL 398

Query: 79  TGPIPNELFKLKKLKEVDLSVNHLSGAIPPSILSLSSLSQFNISHNNFTDLIPSLPKSLK 138
            G IP  L  L  L+ +DL  N +SG IPP++ SLS +   ++S N  +  IPS  ++LK
Sbjct: 399 EGEIPKNLLNLTNLEILDLHRNRISGNIPPNLGSLSRIQFLDLSENLLSGPIPSSLENLK 458

Query: 139 SI---DVSYNQLCGPVPSGLKGFGRANFEHNKCLCGPPLLQGC 179
            +   +VSYN L G +P  ++  G ++F +N  LCG PL   C
Sbjct: 459 RLTHFNVSYNNLSGIIPK-IQASGASSFSNNPFLCGDPLETPC 499
The following BLAST results are available for this feature:
BLAST of Spo18906.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902222446|gb|KNA19172.1|2.9e-8590.4hypothetical protein SOVF_0640... [more]
gi|902210175|gb|KNA16365.1|1.7e-6171.8hypothetical protein SOVF_0896... [more]
gi|731323972|ref|XP_010672716.1|2.9e-5667.9PREDICTED: polygalacturonase i... [more]
gi|731323966|ref|XP_010672713.1|2.9e-5668.8PREDICTED: polygalacturonase i... [more]
gi|731323968|ref|XP_010672714.1|3.2e-5568.1PREDICTED: polygalacturonase i... [more]
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BLAST of Spo18906.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RK06_SPIOL2.0e-8590.4Uncharacterized protein (Fragm... [more]
A0A0K9RA49_SPIOL1.2e-6171.8Uncharacterized protein OS=Spi... [more]
A0A0J8CTI5_BETVU2.0e-5668.8Uncharacterized protein OS=Bet... [more]
A0A0J8CPC2_BETVU2.0e-5667.9Uncharacterized protein OS=Bet... [more]
A0A0J8CNN5_BETVU2.2e-5568.1Uncharacterized protein OS=Bet... [more]
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BLAST of Spo18906.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PGIP1_ARATH4.5e-2543.3Polygalacturonase inhibitor 1 ... [more]
FON1_ORYSJ1.7e-2440.6Leucine-rich repeat receptor-l... [more]
PGIP2_ARATH2.9e-2440.2Polygalacturonase inhibitor 2 ... [more]
Y1124_ARATH9.3e-2335.7Probable LRR receptor-like ser... [more]
IMK2_ARATH2.7e-2243.5Probably inactive leucine-rich... [more]
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BLAST of Spo18906.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G06860.12.5e-2643.3polygalacturonase inhibiting p... [more]
AT5G06870.11.6e-2540.2polygalacturonase inhibiting p... [more]
AT1G12460.15.2e-2435.7Leucine-rich repeat protein ki... [more]
AT3G51740.11.5e-2343.5inflorescence meristem recepto... [more]
AT1G62950.14.4e-2336.2leucine-rich repeat transmembr... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 136..157
score:
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 45..102
score: 3.
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 29..173
score: 6.9

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071229 cellular response to acid chemical
biological_process GO:0016049 cell growth
biological_process GO:0007030 Golgi organization
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:1901701 cellular response to oxygen-containing compound
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0080005 photosystem stoichiometry adjustment
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0007033 vacuole organization
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0000902 cell morphogenesis
biological_process GO:0006457 protein folding
biological_process GO:0006810 transport
biological_process GO:0043067 regulation of programmed cell death
biological_process GO:0031347 regulation of defense response
biological_process GO:0071702 organic substance transport
biological_process GO:0048519 negative regulation of biological process
biological_process GO:0008152 metabolic process
biological_process GO:0045087 innate immune response
biological_process GO:0009755 hormone-mediated signaling pathway
biological_process GO:0098542 defense response to other organism
biological_process GO:0033554 cellular response to stress
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009579 thylakoid
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0005730 nucleolus
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009506 plasmodesma
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0009507 chloroplast
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0090353 polygalacturonase inhibitor activity
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0016740 transferase activity
RNA-Seq Expression