Spo18974 (gene)

Overview
NameSpo18974
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionAuxin response factor
Locationchr3 : 98112565 .. 98118309 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGACAAAAATATGTGTCTATAATAGGCAGCCTGCAGAGTTCTTCTGCAAAACTCTCACAGCTAGTGACACTAGCACACACGGGGGATTCTCTGTACCTCGTCGGGCTGAAAAGATTTTCCCACCTCTAGTGAGTTGAAAAAATTCCAACAAATCCCGTTTTAATTTTGTTTGTCATTTTTTCCCTACCTTATTTATTATTGTGCTTACCTGGAAGACATTTGATAGGATTTTTCTATGCAACCTCCTTGTCAAGAGTTGATGGCTAAAGATTTACATAATCAAACATGCACCTTCAGACATATTTATCGAGGTATGCTCCACTCTGAAAATTCCATCTCATGTCTGCGTTATACATCTGTCATTTAGTTTTCGATGTGTTCCTTCGGTTACAGACTTTTATTGGGCCCAGCCCAAGTAACTTAGGCCCGGCCCAACCATAACCCGACTCAATGAACAGGTCTACTCCCGACGTGTACTTTTCTGTATGGCCTAAGGCCTCTGACGTTGCAGGCTGCCAAATATCCTTGTTTAACCAGAAGCTTTATTTTCATATGTTGACTGGTCTGAAATAGTTTCGGATTTAAACATCTAGAAAAAGTAAATAGTTAAATACCATACAAACGCCTTAAGATATCAATACCCACCAATCTCCTTCCCTACCTCCATGCTGTTTTATGTACAAAATGAGCCTTTGTTGCCGGACACTCATGTTGTTGGATCTGACTGACTGTTCAATATACTTTGATTCTTAAAGTGCAAAAAAAAGCTAACACTTACAATTAACCCAGACTGTTGTGAGTTTCTCCGAACTTTCATTTGCAGTTGAATTAGGTTCTTGAACTTGCGTAAAATGTATCAAGAACAGTGTTGTTAATGTCTTGTATTTGATAGAAATGAAATTAATTGGGTTGTGTCTCCATCACTGCACATAAAAAGACACTTGCTGACTACCGGTTGGAGTGTTTTTGTTAGCTCAAAAAGATTATTTGCTGGTGATCCTGTTCTATTTATAAGGTATCTACTGTTATACATTTATTCAAGATGAAGACGTTTTTTCTTTGGGTAATTTGGTAGAACTAGTGTCATATATAGGCTCTTGGTTGATTCAAGGACTCCTCACTTATAACTTATTGCGTGTAGAGACGAGAAATCACATCTTCTATTAGGTATACGGAGAGCAAACAGACAGCAGCCGGCCCTGGCGTCGTCTGTTATTTCCAGTGACAGCATGCATATTGGAATTCTTGCTGCTGCAGCTCATGCTGCTACTAATAACAGTCCATTTACCATCTTTTATAATCCAAGGTAGTTAACTTTACTTTATATACAGCTTGAATTATTATATTCATCATTCATTAAATTGTGTCTGACTAGCATCCTCTGAAACTGAACTGAACTTGATAATGACAGGGCTAGTCCAGCTGAGTTTGTAGTTCCCTTGGCTAAGTATAATAAAGCTATGTACACCCAAGTTTCTCTTAATTGGCATGCGCTTTAGGATGATGCATGTTTGAAACTGAGGAGTGTGGTGTACGTAGATATATCATATATGGGTACTATAACAGGGATCAATGACCTTGATTCGGCGCGATGGAAAAACTCTTAGTGGCGTAACCTCCAGGTACTGCTCCACTCCCTAAAGTCTTATTCTTAATTTCTCAAAGAACATTGTTTTCTTTTAAAAATAAAGCTATCAAAAGCGAGTGAAGTTACGTTTTTAAATTTTTAATTTATTTATTTACCTTCCTGAGATACATATGCTTGATGTGCGCAATTCTGGCATATCTATATCTATTTGTAGCTTTATTCATAAATAATTTGTCCTTCTCTCCCATCTAATTATCTTCCATATCTTTTTCCATGCAATTTATTGCTACACGTACGTTTTCATTGTCTATTCTTGAGGAAATGTATTATGTTGGAGACTCACCATACCTCTCATGTAATCACGTTTCTTACCGTTTATGTTGTCCGGCTTCTCGTTGTCTATTCATTAACTTTTTATGCTCCCTTCGTCCCATTTAAGGTGCGGCAAATGAGTTTGGCACTGATTTTTTGGCACAAAGGACAGAGGAAGTATTTTCGGATATCAGATATGTGTGGGCAAATACATATCATAGTAAAAGACAAAATAAGAAAAATGATAAAAAAGAAATTAAATGGTACTTTTTTAAACAAAAATGGTACTTTTTTTAACTGAATGGTACTTTTTTTTACAGAATGGTACTTTTTTAACATAAATGGTACTTCCTTTTTTGTCTTTTAGCTATTTGTCTTTTAGCTGATATGTGTGTTGCCACACATATCTGATATCCGAAAAACACTAGTGGAAAAAGGCTTATTTGCATCCCCGCATTTGCCACGCCATTCTGAACATGTGACGCAAATGACAAATTTTAGCATAAAATTTAGTCATTTGCGTCGCAGCTTTGTTAAACTGCGACGCAAATGACTCTAGGATGCCCCCCAGAGTCATTTGCGTCGCAGATTAACAAAGCTGCACGCTATTAACTCAATCAAGTGCGTCGCAGATTTACTAATCTGCGACGCAAATGACTCTGGGGGGCATCCTAGAGTCATTTGCGTCGCAGTTTAACAAAGCTGCGACGCAAATGACTAAATTTTATGCTAAAATTTGTCATTTGCGTCACATGTTCAGAATGGCGTGGCAAATGCGGGGATGCAAATAAGCCTTTTTCCACTAGTGTTTTTCGGATATCAGATATGTGTGGCAACACACATATCAGCTAAAAGACAAATAGCTAAAAGACAAAAAAGGAAGTACCATTTATGTTAAAAAAGTACCATTCTGTAAAAAAAAGTACCATTCAGTTAAAAAAAGTACCATTTTTGTTTAAAAAAGTACCATTTAATTTCTTTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAATAAGTCATTTGCAACGCACGTTAGCTCAATGTGCGAGGCAAATGACTTAATTTTTTGGCACTAAAATTGTCATTTGCGTCGCACATTAAGCTATTGTGCGTGGCAAATGACTTTTTTTTTTTGCGCCTAAAAGTCATTTGCGTCGCACATTTAGCTAATGTGCGACGCAAATAACTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGTGCGTTGCAAATGACTTTTCAGCACCATGCCTGAAAAGTTATTTGCGTCGCACATTAGCTAAATGTGCGACGCAAATAAGGTTCATTTGCGTCGCACAAATGTGCGACGCAAATGACTTTTAGTCATTTGCGTCGAGAGCTTTTGCCACGCACGATATGCGACGCAAATGTGCTTAAAAGTGCGATGCAAATGACCCTTTTTCCATTAAAACAACCTCCAAAGGACAAGTACAAAAGGCATTTGTATTATGGATTTTTTTTTAATTGTTAATTGAAAGTGGTTGTGGGGTTAGACCTGTAGGTATGTGTAATTAGCAGGGGTGTATATGTGATTTTATATGGGGTCCACTATCTGAATATGGAAATATAGCACTTAAATCGGACAGCTATAAATGAGAAGCGTGGCACGGGATGGGGGGAGTATTTCCTTCTTTTTTTTTTTTTGCGCAGCCGTCATGGGCCTCATTGCTCAATATGCTGACCCGCTGTGTTAATAGGTTGGCTGGGATGAATCTACCGCTGGTGATCGACCAAGTCGAGTGTTCCCTAAGCAATCAGGAATGCCAGGTATGCTACTAGATTTAATTTTACCATGGAAGCTTAGTTAATCTCAATCTAAAGTTGTAGCTTTATACTAACCATTAACCGTTAATTGCATAAAGTGGTTTCCTGGTTGGTAAACATGGTTCCGGTGTATTGTTTCTTTCGATTTTGTTCATATCATAACTGGTTGTGTTAATATGCAGATGACGACTCTGATATGGGCAGCATATTCAAGAGAGGCATGCCCTGGCTTGGCGATGAATATGGCATGAAAGATGTTCCTAGCTCAATATTTCCTGGTTTGAGTTTCTTCCAGTGGATGAACATGCAACACAATAATCAAGTTCCTGGTGCACAAACTGGGATTTTTCCATCTATGCTAACAGCATCTGCCATGAATGGTGGCCTTGGTACTGATGATCCATCCAAGGTGTTGAACTTCCAAGCCCCGAATATGTCTATGCCAAATCTCCAGTTCAGCAAAGCTATCCAACATAATCAAGTTGGTTAA

mRNA sequence

ATGGGGACAAAAATATGTGTCTATAATAGGCAGCCTGCAGAGTTCTTCTGCAAAACTCTCACAGCTAGTGACACTAGCACACACGGGGGATTCTCTGTACCTCGTCGGGCTGAAAAGATTTTCCCACCTCTAGATTTTTCTATGCAACCTCCTTGTCAAGAGTTGATGGCTAAAGATTTACATAATCAAACATGCACCTTCAGACATATTTATCGAGGTATACGGAGAGCAAACAGACAGCAGCCGGCCCTGGCGTCGTCTGTTATTTCCAGTGACAGCATGCATATTGGAATTCTTGCTGCTGCAGCTCATGCTGCTACTAATAACAGTCCATTTACCATCTTTTATAATCCAAGGGCTAGTCCAGCTGAGTTTGTAGTTCCCTTGGCTAAGTATAATAAAGCTATGTACACCCAAGTTGGCTGGGATGAATCTACCGCTGGTGATCGACCAAGTCGAGTGTTCCCTAAGCAATCAGGAATGCCAGATGACGACTCTGATATGGGCAGCATATTCAAGAGAGGCATGCCCTGGCTTGGCGATGAATATGGCATGAAAGATGTTCCTAGCTCAATATTTCCTGGTTTGAGTTTCTTCCAGTGGATGAACATGCAACACAATAATCAAGTTCCTGGTGCACAAACTGGGATTTTTCCATCTATGCTAACAGCATCTGCCATGAATGGTGGCCTTGGTACTGATGATCCATCCAAGGTGTTGAACTTCCAAGCCCCGAATATGTCTATGCCAAATCTCCAGTTCAGCAAAGCTATCCAACATAATCAAGTTGGTTAA

Coding sequence (CDS)

ATGGGGACAAAAATATGTGTCTATAATAGGCAGCCTGCAGAGTTCTTCTGCAAAACTCTCACAGCTAGTGACACTAGCACACACGGGGGATTCTCTGTACCTCGTCGGGCTGAAAAGATTTTCCCACCTCTAGATTTTTCTATGCAACCTCCTTGTCAAGAGTTGATGGCTAAAGATTTACATAATCAAACATGCACCTTCAGACATATTTATCGAGGTATACGGAGAGCAAACAGACAGCAGCCGGCCCTGGCGTCGTCTGTTATTTCCAGTGACAGCATGCATATTGGAATTCTTGCTGCTGCAGCTCATGCTGCTACTAATAACAGTCCATTTACCATCTTTTATAATCCAAGGGCTAGTCCAGCTGAGTTTGTAGTTCCCTTGGCTAAGTATAATAAAGCTATGTACACCCAAGTTGGCTGGGATGAATCTACCGCTGGTGATCGACCAAGTCGAGTGTTCCCTAAGCAATCAGGAATGCCAGATGACGACTCTGATATGGGCAGCATATTCAAGAGAGGCATGCCCTGGCTTGGCGATGAATATGGCATGAAAGATGTTCCTAGCTCAATATTTCCTGGTTTGAGTTTCTTCCAGTGGATGAACATGCAACACAATAATCAAGTTCCTGGTGCACAAACTGGGATTTTTCCATCTATGCTAACAGCATCTGCCATGAATGGTGGCCTTGGTACTGATGATCCATCCAAGGTGTTGAACTTCCAAGCCCCGAATATGTCTATGCCAAATCTCCAGTTCAGCAAAGCTATCCAACATAATCAAGTTGGTTAA

Protein sequence

MGTKICVYNRQPAEFFCKTLTASDTSTHGGFSVPRRAEKIFPPLDFSMQPPCQELMAKDLHNQTCTFRHIYRGIRRANRQQPALASSVISSDSMHIGILAAAAHAATNNSPFTIFYNPRASPAEFVVPLAKYNKAMYTQVGWDESTAGDRPSRVFPKQSGMPDDDSDMGSIFKRGMPWLGDEYGMKDVPSSIFPGLSFFQWMNMQHNNQVPGAQTGIFPSMLTASAMNGGLGTDDPSKVLNFQAPNMSMPNLQFSKAIQHNQVG
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo18974.1Spo18974.1mRNA


Homology
[Close]
BLAST of Spo18974.1 vs. NCBI nr
Match: gi|902191653|gb|KNA11889.1| (hypothetical protein SOVF_130960 [Spinacia oleracea])

HSP 1 Score: 305.1 bits (780), Expect = 1.200e-79
Identity = 150/168 (89.29%), Postives = 153/168 (91.07%), Query Frame = 1 

		  

Query: 94  MHIGILAAAAHAATNNSPFTIFYNPRASPAEFVVPLAKYNKAMYTQVGWDESTAGDRPSR 153
           MHIGILAAAAHAATNNSPFTIFYNPRASPAEFVVPLAKYNKAMYTQVGWDESTAGDRPSR
Sbjct: 1   MHIGILAAAAHAATNNSPFTIFYNPRASPAEFVVPLAKYNKAMYTQVGWDESTAGDRPSR 60

Query: 154 VFPKQSGMPDDDSDMGSIFKRGMPWLGDEYGMKDVPSSIFPGLSFFQWMNMQHNNQVPGA 213
           VFPKQSGMPDDDSDMGSIFKRGMPWLGDEYGMKDVPSSIFPGLSFFQWMNMQHNNQVPGA
Sbjct: 61  VFPKQSGMPDDDSDMGSIFKRGMPWLGDEYGMKDVPSSIFPGLSFFQWMNMQHNNQVPGA 120

Query: 214 QTGIFPSMLTASAMNGGLGTDDPSKVLNFQAPNMSMPNLQFSKAIQHN 262
           QTGIFPSMLTASAMNGGLGTDDPSK    Q+ N S    Q  + +  N
Sbjct: 121 QTGIFPSMLTASAMNGGLGTDDPSKQ---QSANWSQQQQQQLQQLLQN 165
[Close]
BLAST of Spo18974.1 vs. NCBI nr
Match: gi|147770403|emb|CAN69277.1| (hypothetical protein VITISV_023245 [Vitis vinifera])

HSP 1 Score: 241.5 bits (615), Expect = 1.700e-60
Identity = 133/252 (52.78%), Postives = 159/252 (63.10%), Query Frame = 1 

		  

Query: 73  GIRRANRQQPALASSVISSDSMHIGILAAAAHAATNNSPFTIFYNPRASPAEFVVPLA-- 132
           GIRRANRQQPAL+SSVIS DSMHIGILAAAAHAA NNSPFTIFYNPRASP+EFV+PLA  
Sbjct: 258 GIRRANRQQPALSSSVISCDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPLAKY 317

Query: 133 -----------------------KYNKAMYTQVGWDE-------------STAGDRPSRV 192
                                     + M T  G  E              +AG+RPSRV
Sbjct: 318 NKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISELRCCAMEKFTMAQPSAGERPSRV 377

Query: 193 -----------------------FPKQSGMPDDDSDMGSIFKRGMPWLGDEYGMKDVPSS 252
                                  FPKQ G PDD+SD+ S FKRGMPWLGD++GMKD PSS
Sbjct: 378 SIWEIEPVVTPFYLCPPPFFRPKFPKQPGFPDDESDIESAFKRGMPWLGDDFGMKDAPSS 437

Query: 253 IFPGLSFFQWMNMQHNNQVPGAQTGIFPSMLTASAMNGGLGTDDPSKVLNFQAPNMSMPN 264
           IFPGL+  QWM+MQ NNQ P +Q+G+FP M++++ ++  L TDDPSK+L+FQAP +S P+
Sbjct: 438 IFPGLNLVQWMSMQQNNQFPASQSGLFPPMVSSTVLHSNLSTDDPSKLLSFQAPALSAPS 497
[Close]
BLAST of Spo18974.1 vs. NCBI nr
Match: gi|902208139|gb|KNA15863.1| (hypothetical protein SOVF_094480 [Spinacia oleracea])

HSP 1 Score: 236.5 bits (602), Expect = 5.300e-59
Identity = 117/149 (78.52%), Postives = 119/149 (79.87%), Query Frame = 1 

		  

Query: 139 QVGWDESTAGDRPSRV-----------------------FPKQSGMPDDDSDMGSIFKRG 198
           QVGWDESTAGDRP RV                       FPKQ GMPDDDSDM SIFKRG
Sbjct: 333 QVGWDESTAGDRPGRVSIWDIEPVVTPFYICPPPFFRPKFPKQPGMPDDDSDMDSIFKRG 392

Query: 199 MPWLGDEYGMKDVPSSIFPGLSFFQWMNMQHNNQVPGAQTGIFPSMLTASAMNGGLGTDD 258
           MPWLGDEYGMKDVPSSIFPGLS  QWMNMQHNNQVPGAQ GIFPSMLTASAMNGGLGTDD
Sbjct: 393 MPWLGDEYGMKDVPSSIFPGLSLVQWMNMQHNNQVPGAQPGIFPSMLTASAMNGGLGTDD 452

Query: 259 PSKVLNFQAPNMSMPNLQFSKAIQHNQVG 265
           PSK+LNFQAPNMSMPNLQFSKA+Q NQVG
Sbjct: 453 PSKLLNFQAPNMSMPNLQFSKAVQQNQVG 481
[Close]
BLAST of Spo18974.1 vs. NCBI nr
Match: gi|8954059|gb|AAF82232.1|AC069143_8 (Contains similarity to a non-phototropic hypocotyl 4 (NPH4) protein from Arabidopsis thaliana gb|AF186466 [Arabidopsis thaliana])

HSP 1 Score: 219.2 bits (557), Expect = 8.800e-54
Identity = 115/162 (70.99%), Postives = 123/162 (75.93%), Query Frame = 1 

		  

Query: 9   NRQPAEFFCKTLTASDTSTHGGFSVPRRA-EKIFPPLDFSMQPPCQELMAKDLHNQTCTF 68
           NRQP EFFCKTLTASDTSTHGGFSVPRRA EKIFPPLDFSMQPP QE++AKDLH+ T TF
Sbjct: 105 NRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTF 164

Query: 69  RHIYR-----------------------------GIRRANRQQPALASSVISSDSMHIGI 128
           RHIYR                             GIRRANRQ P L+SSVISSDSMHIGI
Sbjct: 165 RHIYRGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGI 224

Query: 129 LAAAAHAATNNSPFTIFYNPRASPAEFVVPLAKYNKAMYTQV 141
           LAAAAHA  N+SPFTIF+NPRASP+EFVVPLAKYNKA+Y QV
Sbjct: 225 LAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQV 266
[Close]
BLAST of Spo18974.1 vs. NCBI nr
Match: gi|976915193|gb|KVI01160.1| (Aux/IAA-ARF-dimerization [Cynara cardunculus var. scolymus])

HSP 1 Score: 217.2 bits (552), Expect = 3.300e-53
Identity = 121/245 (49.39%), Postives = 154/245 (62.86%), Query Frame = 1 

		  

Query: 73  GIRRANRQQPALASSVISSDSMHIGILAAAAHAATNNSPFTIFYNPRASPAEFVVPLA-- 132
           GIRRANRQQPAL+SSVISSDSMHIGILAAAAHAA NNSPFTIFYNPRASPAEFV+PLA  
Sbjct: 223 GIRRANRQQPALSSSVISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPAEFVIPLAKY 282

Query: 133 ------------KYNKAMYTQ-------------------VGWDES---TAGDRPSRV-- 192
                       ++     T+                   V W  S   TAG+RP+RV  
Sbjct: 283 NKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDMDGVRWKNSQWRTAGERPTRVSV 342

Query: 193 ---------------------FPKQSGMPDDDSDMGSIFKRGMPWLGDEYGMKDVPSSIF 252
                                FP+Q GMPD D+++ + ++RGMPWL +E GMKD  SS+F
Sbjct: 343 WEVEPVVTPFYMCPPPFFRQKFPQQPGMPDGDTEIENAYRRGMPWL-EELGMKDASSSVF 402

Query: 253 PGLSFFQWMNMQHNNQVPGAQTGIFPSMLTASAMNGGLGTDDPSKVLNFQAPNMSMPNLQ 259
           PGLS  QWM+MQ N++ P  Q G+FPS+++++++NG L  DDPSK+L+FQ+PN+S+P+ Q
Sbjct: 403 PGLSLVQWMSMQQNHRFPSMQPGVFPSIVSSNSINGSLSFDDPSKLLSFQSPNLSVPSPQ 462
[Close]
BLAST of Spo18974.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QX76_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_130960 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 8.500e-80
Identity = 150/168 (89.29%), Postives = 153/168 (91.07%), Query Frame = 1 

		  

Query: 94  MHIGILAAAAHAATNNSPFTIFYNPRASPAEFVVPLAKYNKAMYTQVGWDESTAGDRPSR 153
           MHIGILAAAAHAATNNSPFTIFYNPRASPAEFVVPLAKYNKAMYTQVGWDESTAGDRPSR
Sbjct: 1   MHIGILAAAAHAATNNSPFTIFYNPRASPAEFVVPLAKYNKAMYTQVGWDESTAGDRPSR 60

Query: 154 VFPKQSGMPDDDSDMGSIFKRGMPWLGDEYGMKDVPSSIFPGLSFFQWMNMQHNNQVPGA 213
           VFPKQSGMPDDDSDMGSIFKRGMPWLGDEYGMKDVPSSIFPGLSFFQWMNMQHNNQVPGA
Sbjct: 61  VFPKQSGMPDDDSDMGSIFKRGMPWLGDEYGMKDVPSSIFPGLSFFQWMNMQHNNQVPGA 120

Query: 214 QTGIFPSMLTASAMNGGLGTDDPSKVLNFQAPNMSMPNLQFSKAIQHN 262
           QTGIFPSMLTASAMNGGLGTDDPSK    Q+ N S    Q  + +  N
Sbjct: 121 QTGIFPSMLTASAMNGGLGTDDPSKQ---QSANWSQQQQQQLQQLLQN 165
[Close]
BLAST of Spo18974.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R8I5_SPIOL (Auxin response factor OS=Spinacia oleracea GN=SOVF_094480 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.700e-59
Identity = 117/149 (78.52%), Postives = 119/149 (79.87%), Query Frame = 1 

		  

Query: 139 QVGWDESTAGDRPSRV-----------------------FPKQSGMPDDDSDMGSIFKRG 198
           QVGWDESTAGDRP RV                       FPKQ GMPDDDSDM SIFKRG
Sbjct: 333 QVGWDESTAGDRPGRVSIWDIEPVVTPFYICPPPFFRPKFPKQPGMPDDDSDMDSIFKRG 392

Query: 199 MPWLGDEYGMKDVPSSIFPGLSFFQWMNMQHNNQVPGAQTGIFPSMLTASAMNGGLGTDD 258
           MPWLGDEYGMKDVPSSIFPGLS  QWMNMQHNNQVPGAQ GIFPSMLTASAMNGGLGTDD
Sbjct: 393 MPWLGDEYGMKDVPSSIFPGLSLVQWMNMQHNNQVPGAQPGIFPSMLTASAMNGGLGTDD 452

Query: 259 PSKVLNFQAPNMSMPNLQFSKAIQHNQVG 265
           PSK+LNFQAPNMSMPNLQFSKA+Q NQVG
Sbjct: 453 PSKLLNFQAPNMSMPNLQFSKAVQQNQVG 481
[Close]
BLAST of Spo18974.1 vs. UniProtKB/TrEMBL
Match: M4DJ39_BRARP (Auxin response factor OS=Brassica rapa subsp. pekinensis PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 6.100e-54
Identity = 117/170 (68.82%), Postives = 126/170 (74.12%), Query Frame = 1 

		  

Query: 1   MGTKICVYNRQPAEFFCKTLTASDTSTHGGFSVPRRA-EKIFPPLDFSMQPPCQELMAKD 60
           MG K+   NRQP EFFCKTLTASDTSTHGGFSVPRRA EKIFPPLDFSMQPP QE++AKD
Sbjct: 114 MGLKL---NRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKD 173

Query: 61  LHNQTCTFRHIYR-----------------------------GIRRANRQQPALASSVIS 120
           LH+ T TFRHIYR                             G+R ANRQ P L+SSVIS
Sbjct: 174 LHDTTWTFRHIYRGWSVFVSTKRLIAGDSVLFVRDEKSQLTLGLRLANRQTPTLSSSVIS 233

Query: 121 SDSMHIGILAAAAHAATNNSPFTIFYNPRASPAEFVVPLAKYNKAMYTQV 141
           SDSMHIGILAAAAHA  NNSPFTIF+NPRASP+EFVVPLAKYNKA+Y QV
Sbjct: 234 SDSMHIGILAAAAHANANNSPFTIFFNPRASPSEFVVPLAKYNKALYAQV 280
[Close]
BLAST of Spo18974.1 vs. UniProtKB/TrEMBL
Match: A0A103Y265_CYNCS (Auxin response factor OS=Cynara cardunculus var. scolymus GN=Ccrd_020587 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.300e-53
Identity = 121/245 (49.39%), Postives = 154/245 (62.86%), Query Frame = 1 

		  

Query: 73  GIRRANRQQPALASSVISSDSMHIGILAAAAHAATNNSPFTIFYNPRASPAEFVVPLA-- 132
           GIRRANRQQPAL+SSVISSDSMHIGILAAAAHAA NNSPFTIFYNPRASPAEFV+PLA  
Sbjct: 223 GIRRANRQQPALSSSVISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPAEFVIPLAKY 282

Query: 133 ------------KYNKAMYTQ-------------------VGWDES---TAGDRPSRV-- 192
                       ++     T+                   V W  S   TAG+RP+RV  
Sbjct: 283 NKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDMDGVRWKNSQWRTAGERPTRVSV 342

Query: 193 ---------------------FPKQSGMPDDDSDMGSIFKRGMPWLGDEYGMKDVPSSIF 252
                                FP+Q GMPD D+++ + ++RGMPWL +E GMKD  SS+F
Sbjct: 343 WEVEPVVTPFYMCPPPFFRQKFPQQPGMPDGDTEIENAYRRGMPWL-EELGMKDASSSVF 402

Query: 253 PGLSFFQWMNMQHNNQVPGAQTGIFPSMLTASAMNGGLGTDDPSKVLNFQAPNMSMPNLQ 259
           PGLS  QWM+MQ N++ P  Q G+FPS+++++++NG L  DDPSK+L+FQ+PN+S+P+ Q
Sbjct: 403 PGLSLVQWMSMQQNHRFPSMQPGVFPSIVSSNSINGSLSFDDPSKLLSFQSPNLSVPSPQ 462
[Close]
BLAST of Spo18974.1 vs. UniProtKB/TrEMBL
Match: A0A0D3AK85_BRAOL (Auxin response factor OS=Brassica oleracea var. oleracea PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 5.200e-53
Identity = 118/180 (65.56%), Postives = 126/180 (70.00%), Query Frame = 1 

		  

Query: 1   MGTKICVYNRQPAEFFCKTLTASDTSTHGGFSVPRRA-EKIFPPLDFSMQPPCQELMAKD 60
           MG K+   NRQP EFFCKTLTASDTSTHGGFSVPRRA EKIFP LDFSMQPPCQEL+AKD
Sbjct: 133 MGLKL---NRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKD 192

Query: 61  LHNQTCTFRHIYRGIRR---------------------------------------ANRQ 120
           +H+ T TFRHIYRG  +                                       ANRQ
Sbjct: 193 IHDNTWTFRHIYRGQPKRHLLTTGWSVFVSNKRLFAGDSVLFIRDGKAQLLLGIRRANRQ 252

Query: 121 QPALASSVISSDSMHIGILAAAAHAATNNSPFTIFYNPRASPAEFVVPLAKYNKAMYTQV 141
           QPAL+SSVISSDSMHIG+LAAAAHA  NNSPFTIFYNPRA+PAEFVVPLAKY KAMY QV
Sbjct: 253 QPALSSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQV 309
[Close]
BLAST of Spo18974.1 vs. ExPASy Swiss-Prot
Match: ARFE_ORYSJ (Auxin response factor 5 OS=Oryza sativa subsp. japonica GN=ARF5 PE=2 SV=2)

HSP 1 Score: 191.8 bits (486), Expect = 9.400e-48
Identity = 102/169 (60.36%), Postives = 113/169 (66.86%), Query Frame = 1 

		  

Query: 10  RQPAEFFCKTLTASDTSTHGGFSVPRRA-EKIFPPLDFSMQPPCQELMAKDLHNQTCTFR 69
           R   EFFCKTLTASDTSTHGGFSVPRRA EKIFPPLDFSMQPP QEL A+D+H+   TFR
Sbjct: 142 RPQMEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFR 201

Query: 70  HIYRGI---------------------------------------RRANRQQPALASSVI 129
           HIYRG                                        RRANRQ   ++SSV+
Sbjct: 202 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVL 261

Query: 130 SSDSMHIGILAAAAHAATNNSPFTIFYNPRASPAEFVVPLAKYNKAMYT 139
           SSDSMHIG+LAAAAHAA N+SPFTIFYNPRASP EFV+P AKY KA+Y+
Sbjct: 262 SSDSMHIGVLAAAAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKALYS 310
[Close]
BLAST of Spo18974.1 vs. ExPASy Swiss-Prot
Match: ARFS_ORYSJ (Auxin response factor 19 OS=Oryza sativa subsp. japonica GN=ARF19 PE=2 SV=2)

HSP 1 Score: 186.0 bits (471), Expect = 5.200e-46
Identity = 103/168 (61.31%), Postives = 112/168 (66.67%), Query Frame = 1 

		  

Query: 10  RQPAEFFCKTLTASDTSTHGGFSVPRRA-EKIFPPLDFSMQPPCQELMAKDLHNQTCTFR 69
           R   EFFCKTLTASDTSTHGGFSVPRRA EKIFPPLDFSMQPP QEL A+DLH+   TFR
Sbjct: 148 RPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFR 207

Query: 70  HIYRG----------------------------IRRANRQ----------QPA-LASSVI 129
           HIYRG                            +R   +Q          QP  ++SSV+
Sbjct: 208 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVL 267

Query: 130 SSDSMHIGILAAAAHAATNNSPFTIFYNPRASPAEFVVPLAKYNKAMY 138
           SSDSMHIGILAAAAHAA NNSPFTIFYNPRASP EFV+P AKY KA+Y
Sbjct: 268 SSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVY 315
[Close]
BLAST of Spo18974.1 vs. ExPASy Swiss-Prot
Match: ARFK_ORYSJ (Auxin response factor 11 OS=Oryza sativa subsp. japonica GN=ARF11 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 6.300e-44
Identity = 93/171 (54.39%), Postives = 113/171 (66.08%), Query Frame = 1 

		  

Query: 9   NRQPAEFFCKTLTASDTSTHGGFSVPRRA-EKIFPPLDFSMQPPCQELMAKDLHNQTCTF 68
           ++ P E+FCK LTASDTSTHGGFSVPRRA EK+FP LD+SMQPP QEL+ +DLH+   TF
Sbjct: 136 SKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTF 195

Query: 69  RHIYRG---------------------------------------IRRANRQQPALASSV 128
           RHIYRG                                       +RRA RQQ  L+SSV
Sbjct: 196 RHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSV 255

Query: 129 ISSDSMHIGILAAAAHAATNNSPFTIFYNPRASPAEFVVPLAKYNKAMYTQ 140
           +S+DSMHIG+LAAAAHAA++ S FTI+YNPR SP+ FV+P+A+YNKA Y Q
Sbjct: 256 LSTDSMHIGVLAAAAHAASSGSSFTIYYNPRTSPSPFVIPVARYNKATYMQ 306
[Close]
BLAST of Spo18974.1 vs. ExPASy Swiss-Prot
Match: ARFK_ORYSI (Auxin response factor 11 OS=Oryza sativa subsp. indica GN=ARF11 PE=3 SV=2)

HSP 1 Score: 179.1 bits (453), Expect = 6.300e-44
Identity = 93/171 (54.39%), Postives = 113/171 (66.08%), Query Frame = 1 

		  

Query: 9   NRQPAEFFCKTLTASDTSTHGGFSVPRRA-EKIFPPLDFSMQPPCQELMAKDLHNQTCTF 68
           ++ P E+FCK LTASDTSTHGGFSVPRRA EK+FP LD+SMQPP QEL+ +DLH+   TF
Sbjct: 136 SKHPTEYFCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTF 195

Query: 69  RHIYRG---------------------------------------IRRANRQQPALASSV 128
           RHIYRG                                       +RRA RQQ  L+SSV
Sbjct: 196 RHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSV 255

Query: 129 ISSDSMHIGILAAAAHAATNNSPFTIFYNPRASPAEFVVPLAKYNKAMYTQ 140
           +S+DSMHIG+LAAAAHAA++ S FTI+YNPR SP+ FV+P+A+YNKA Y Q
Sbjct: 256 LSTDSMHIGVLAAAAHAASSGSSFTIYYNPRTSPSPFVIPVARYNKATYMQ 306
[Close]
BLAST of Spo18974.1 vs. ExPASy Swiss-Prot
Match: ARFU_ORYSJ (Auxin response factor 21 OS=Oryza sativa subsp. japonica GN=ARF21 PE=2 SV=2)

HSP 1 Score: 177.6 bits (449), Expect = 1.800e-43
Identity = 101/168 (60.12%), Postives = 111/168 (66.07%), Query Frame = 1 

		  

Query: 10  RQPAEFFCKTLTASDTSTHGGFSVPRRA-EKIFPPLDFSMQPPCQELMAKDLHNQTCTFR 69
           R   EFFCKTLTASDTSTHGGFSVPRRA E+IFP LDFSMQPP QEL A+DLH+   TFR
Sbjct: 126 RPQTEFFCKTLTASDTSTHGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFR 185

Query: 70  HIYRG----------------------------IRRANRQ----------QPA-LASSVI 129
           HIYRG                            IR A +Q          QP  L+SSV+
Sbjct: 186 HIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVL 245

Query: 130 SSDSMHIGILAAAAHAATNNSPFTIFYNPRASPAEFVVPLAKYNKAMY 138
           SSDSMHIGILAAAAHAA NNS FTI+YNPRAS +EFV+P AKY KA+Y
Sbjct: 246 SSDSMHIGILAAAAHAAANNSQFTIYYNPRASTSEFVIPFAKYQKAVY 293
[Close]
BLAST of Spo18974.1 vs. TAIR (Arabidopsis)
Match: AT1G19220.1 (auxin response factor 19)

HSP 1 Score: 159.1 bits (401), Expect = 3.800e-39
Identity = 94/180 (52.22%), Postives = 109/180 (60.56%), Query Frame = 1 

		  

Query: 1   MGTKICVYNRQPAEFFCKTLTASDTSTHGGFSVPRRA-EKIFPPLDFSMQPPCQELMAKD 60
           MG K+   NRQP EFFCKTLTASDTSTHGGFSVPRRA EKIFPPLDFSMQPP QE++AKD
Sbjct: 114 MGLKL---NRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKD 173

Query: 61  LHNQTCTFRHIYRGIRR-----------ANRQQPALASSVI----SSDSMHIGILAAAAH 120
           LH+ T TFRHIYRG  +            + ++     SV+        + +GI  A   
Sbjct: 174 LHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQ 233

Query: 121 AATNN------------------------SPFTIFYNPRASPAEFVVPLAKYNKAMYTQV 141
             T +                        SPFTIF+NPRASP+EFVVPLAKYNKA+Y QV
Sbjct: 234 TPTLSSSVISSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQV 290
[Close]
BLAST of Spo18974.1 vs. TAIR (Arabidopsis)
Match: AT5G20730.1 (Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related)

HSP 1 Score: 130.2 bits (326), Expect = 1.900e-30
Identity = 78/151 (51.66%), Postives = 90/151 (59.60%), Query Frame = 1 

		  

Query: 139 QVGWDESTAGDRPSRV-----------------------FPKQSGMPDDDSDMGSIFKRG 198
           Q+GWDES AGDRPSRV                       F  Q GMPDD++DM S  KR 
Sbjct: 336 QIGWDESAAGDRPSRVSVWDIEPVLTPFYICPPPFFRPRFSGQPGMPDDETDMESALKRA 395

Query: 199 MPWLGDEYGMKDVPSSIFPGLSFFQWMNM-QHNNQVP--GAQTGIFPSML--TASAMNGG 258
           MPWL +   MKD  S+IFPGLS  QWMNM Q N Q+P   AQ G FPSML  TA+  N  
Sbjct: 396 MPWLDNSLEMKDPSSTIFPGLSLVQWMNMQQQNGQLPSAAAQPGFFPSMLSPTAALHNNL 455

Query: 259 LGTDDPSKVLNFQAPN--MSMPNLQFSKAIQ 260
            GTDDPSK+L+FQ P+  +S  NLQF+K  Q
Sbjct: 456 GGTDDPSKLLSFQTPHGGISSSNLQFNKQNQ 486
[Close]
BLAST of Spo18974.1 vs. TAIR (Arabidopsis)
Match: AT5G62000.1 (auxin response factor 2)

HSP 1 Score: 125.6 bits (314), Expect = 4.700e-29
Identity = 72/161 (44.72%), Postives = 90/161 (55.90%), Query Frame = 1 

		  

Query: 16  FCKTLTASDTSTHGGFSVPRR-AEKIFPPLDFSMQPPCQELMAKDLHNQTCTFRHIYRGI 75
           FCKTLTASDTSTHGGFSV RR A++  PPLD S QPP QEL+AKDLH     FRHI+RG 
Sbjct: 164 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQ 223

Query: 76  RRANRQQPA---------------------------------------LASSVISSDSMH 135
            R +  Q                                         + SSVISS SMH
Sbjct: 224 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 283

Query: 136 IGILAAAAHAATNNSPFTIFYNPRASPAEFVVPLAKYNKAM 137
           +G+LA A HA +  + FT++Y PR SP+EF+VP  +Y +++
Sbjct: 284 LGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESV 324
[Close]
BLAST of Spo18974.1 vs. TAIR (Arabidopsis)
Match: AT1G59750.1 (auxin response factor 1)

HSP 1 Score: 122.9 bits (307), Expect = 3.000e-28
Identity = 74/160 (46.25%), Postives = 89/160 (55.62%), Query Frame = 1 

		  

Query: 16  FCKTLTASDTSTHGGFSVPRR-AEKIFPPLDFSMQPPCQELMAKDLHNQTCTFRHIYRG- 75
           FCKTLTASDTSTHGGFSV RR A+   PPLD S QPP QEL+A DLHN    FRHI+RG 
Sbjct: 124 FCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQ 183

Query: 76  ---------------------------IRRANRQQPA-----------LASSVISSDSMH 135
                                      +R  N +              + SSVISS SMH
Sbjct: 184 PRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMH 243
[Close]
BLAST of Spo18974.1 vs. TAIR (Arabidopsis)
Match: AT1G19850.1 (Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related)

HSP 1 Score: 112.8 bits (281), Expect = 3.100e-25
Identity = 51/66 (77.27%), Postives = 57/66 (86.36%), Query Frame = 1 

		  

Query: 9   NRQPAEFFCKTLTASDTSTHGGFSVPRRA-EKIFPPLDFSMQPPCQELMAKDLHNQTCTF 68
           ++ P EFFCKTLTASDTSTHGGFSVPRRA EK+FPPLD+S QPP QEL+ +DLH  T TF
Sbjct: 151 SKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTF 210

Query: 69  RHIYRG 74
           RHIYRG
Sbjct: 211 RHIYRG 216
The following BLAST results are available for this feature:
BLAST of Spo18974.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902191653|gb|KNA11889.1|1.2e-7989.2hypothetical protein SOVF_1309... [more]
gi|147770403|emb|CAN69277.1|1.7e-6052.7hypothetical protein VITISV_02... [more]
gi|902208139|gb|KNA15863.1|5.3e-5978.5hypothetical protein SOVF_0944... [more]
gi|8954059|gb|AAF82232.1|AC069143_88.8e-5470.9Contains similarity to a non-p... [more]
gi|976915193|gb|KVI01160.1|3.3e-5349.3Aux/IAA-ARF-dimerization [Cyna... [more]
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BLAST of Spo18974.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QX76_SPIOL8.5e-8089.2Uncharacterized protein OS=Spi... [more]
A0A0K9R8I5_SPIOL3.7e-5978.5Auxin response factor OS=Spina... [more]
M4DJ39_BRARP6.1e-5468.8Auxin response factor OS=Brass... [more]
A0A103Y265_CYNCS2.3e-5349.3Auxin response factor OS=Cynar... [more]
A0A0D3AK85_BRAOL5.2e-5365.5Auxin response factor OS=Brass... [more]
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BLAST of Spo18974.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ARFE_ORYSJ9.4e-4860.3Auxin response factor 5 OS=Ory... [more]
ARFS_ORYSJ5.2e-4661.3Auxin response factor 19 OS=Or... [more]
ARFK_ORYSJ6.3e-4454.3Auxin response factor 11 OS=Or... [more]
ARFK_ORYSI6.3e-4454.3Auxin response factor 11 OS=Or... [more]
ARFU_ORYSJ1.8e-4360.1Auxin response factor 21 OS=Or... [more]
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BLAST of Spo18974.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G19220.13.8e-3952.2auxin response factor 19[more]
AT5G20730.11.9e-3051.6Transcriptional factor B3 fami... [more]
AT5G62000.14.7e-2944.7auxin response factor 2[more]
AT1G59750.13.0e-2846.2auxin response factor 1[more]
AT1G19850.13.1e-2577.2Transcriptional factor B3 fami... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010525Auxin response factorPFAMPF06507Auxin_respcoord: 102..140
score: 1.3
IPR015300DNA-binding pseudobarrel domainGENE3D2.40.330.10coord: 10..73
score: 3.4
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 5..77
score: 5.36
NoneNo IPR availablePANTHERPTHR31384FAMILY NOT NAMEDcoord: 9..228
score: 5.5E
NoneNo IPR availablePANTHERPTHR31384:SF21AUXIN RESPONSE FACTOR 19-RELATEDcoord: 9..228
score: 5.5E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009725 response to hormone
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006952 defense response
biological_process GO:0009607 response to biotic stimulus
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo222890.70Barchart | Table
Spo085080.66Barchart | Table