Spo18988 (gene)

Overview
NameSpo18988
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSuper_scaffold_114 : 919036 .. 922170 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCTTTTGATGTGAAACTTGGTTGAACATGACTAGCTCTGGAACTGGAATACTGGATAGTGCAAATCAAAGGAGACTCCATGCTTTTCTATTCAAGGTATTCTTTTATTATAGTAGCTTTTGGAAATTGTCTCACCCTTTTGATTTGGTTATTTGTGGTGCTGGAAGATTGGGGTTGGTGTTCTTCTGGTGATGTATTAGCAGCTAGCCTGGGAGTTTTTGATGAAACGTTCTACATGCTAAAGAACAAATTAAAGATGGCTAGTTAACTACTAATGTGCACAATTTGACATTAAACTTCGGTCCACCTTAATTGTTAATTCCCTAGTATCTCCTCAGTTTACCTCTTTTAGAATGGATCAATTTGTTGTATAATATTCTTCCTCCTGAGAAAGTTAGACCATACTGGTTCTACTAAATGAGATTCTACATCCAATATACTATCAGAATGTAAGCTTCAACTGCCTTTTCCTCTCACATTCATCTAAGCCCGTAAAATCAGTCGAGCCAATCAATTCAATACCATGAACACACTGCTGATTAGACAAGCCCCTATAATTTGTACATAATTAGCAGATATTCAGATTAGGGACAGAAACACCCTAATCTGAATATCTGCTAATCTGCAGTGGGTGGCTCTGTTGTATTTTGGAGTCTGGTAGTTAAAGCGTTGACCTGTTAATGTTACCAATGGTTGCATTTCTTATGTCAATAAGTAGTAAAGGCATAGGGAGCTTCCAACTTACTTCTTAAACTGGGTAATAGAGTATCAGATGGTAATGCATGGCCCGTTGTGAAACATCTGAAGGACTACATTTTCGCTTCCACTATTAGTTGCTGGTCCGACTTGGATCAACTATAATTTTCTTGATGTGATATTTTATATACTTGTTACTGAATTTATAGCTGCCAAAATTGTATTACTGATGTTCAGACTTCTAGGAATTCTATCCAGGANTTACTGATGTTCAGACTTCTAGGAATTCTATCCAGGAGCCTAAATAGTGTACTAAACTACTACGGAGTAAATATGCCGAAATCAGAACATATACTTACAATTAATTAGAAAAGTATTTATTTTCGTGAACCAATTCAATAATTTTGATTGGGAATTTTTGCGTGCTATTGTTTACCGTGGACTTCTCTTAATTTATTTTACACCGTGGTAGAAACTGTTACTTACCGTTTGTATATTTTTTTTTCTTAAGGTCCAGGATGCATTTGGAGATAATGGTGGTGGAAGAAAAGAATCAAGTGGTGATGCATAGCTCCTTCAACTATGAAGCTGATATTCTTGAACTTGTATTGAGTGGCCTTTGTTTTAATTTGAAGATGACATTTTAGAATAATAAGTTGGAATTATAATAGTAGATATGGTGTTTTGGGTATTAAATTTGTGTTTTGGAGATACTAGCTAGCTAATTTAATAGTTTGGATAATGTGTAAACTAAATTTGATGATATGATTTGGAGCGAGCTAAGTACGTATTATTACATTTTAAAGGTGTTCATGCTATATATAGTTAATTACATCTGTTTGGTTTGAATTAGTTTCAGGTTGATTTTGCTTCGGGCAACAATGAACGATAAAAAAATAAAATAAAACTATATTCTCGACGCTATATAGTGTCAAAACATGATTCGCGCAAAAAATTGTTGGTAAGCCCGCAAAAAAAATTACTACGTAGATGACCGTCGAGAAATAATTAGCTACACCAAACACCGTCGAGATTCTCGACGCAGATTGGCGCCAAAAATATTCTGTAGACGACAAACACCGTCGAGAATATCGACGTTGCCAAGCGTCGAGAATTTCTCTACGGCCAAATTCTCGACGCTTGCTTTGGGCGTCGAGAAAAATTTTCTCGACGCCTTTAGGCGTCGAAAAATAGCCAAAAAAGCGTCGAAAAATGACGCGTTTTGTAGCAGTGAGAGCTCTATCATTCCCTCCAGATATACCAATATCAACCTATTTCCGCGTCGAAATCCCAGACCAATAACAAACATCAACAAGAGTATCCCGAACCACATTATGCCAATGTTTAATACCCACAATGTCTGCACATGACACCACATGATCACCGACGATATCTCCCGCAAAGACCCTGGAGCAAGCAGAACATGACGCCGTAACAGAGAACAAAGGAACCCCCAATTATTTTATTTTAGCCCGTGCGATGCAGGAATTCTATCAAATTGTTAAGCTAATATAAAATTCCTATATATTTCAACTGTTATATCTTATCATATCCTATATAATAATATAAAAAAAACCATTGGCTTATATGAGGCCTCCAAACCCTCAACCATGCTTTCTCATTCACTCCCTCCAATCATATTCTCCACATTTACAAAATTCAAAATTATAACAAAATATCTATTATGAAGTTAACTGTAGAACACAACCCACATTCCCCTCCCTTACCTAACCGTCAAAAAAAAAACTCATCTATTTCCTCTCTACCCGCCTCCATCAAAGAATAACATTCATCAATCGATCACCACCGTCACCGATCTTCTTGCTGGCAAACAATCCGTGTCATCGTTGTGTTGCCACCGCAACTGCCTTCGAGTGCTTGTCAGGTTAGTGTCTATTTTTATACCTTAAATTCATGTCAATTAGTTTTTATAGGCTATGGAGTTTGAGTTGTGACGGAGGTTTTGATGGGTGATTGGATTTTGTTAGAACATATGCTACTATATTCTCATTAATATCATTGATAGTGTAACGTTAATCAAAGCAAATTGTGACTTGCCATAATAAGTGTGATTGGAAATCAATAGTTAGCATTATAGGCGTGATTTGATTAGCATATTCAATGAAAGTTGTGGAAGGAAACAGTGGCACTGTGGCAAAGCATTGTATTGATTCTCTTGTCTACTTTATAGTCCCTTTATCTAATTCAAGAAAAAAATGGGATGGATTTTTTTAGTTTCTATGTGGAAAAGCACGGGATATATAGAGTATATCTTGAATTACTTTGTCCTTTTCTGATTCAGTAGTTTTAAATTTAGTTTTTGATTGTCGATAATTCGTTATTGGGATGATAGTTGAAGTAACTGACAAATTTATGCTTCCCTAATGGCTAAATTTGATTGTCGTATATGATATCACTTAATATAAAGAGCAACATGA

mRNA sequence

AATCTTTTGATGTGAAACTTGGTTGAACATGACTAGCTCTGGAACTGGAATACTGGATAGTGCAAATCAAAGGAGACTCCATGCTTTTCTATTCAAGAACACAACCCACATTCCCCTCCCTTACCTAACCGTCAAAAAAAAAACTCATCTATTTCCTCTCTACCCGCCTCCATCAAAGAATAACATTCATCAATCGATCACCACCGTCACCGATCTTCTTGCTGGCAAACAATCCGTGTCATCGTTGTGTTGCCACCGCAACTGCCTTCGAGTGCTTGTCAGAGCAACATGA

Coding sequence (CDS)

ATGACTAGCTCTGGAACTGGAATACTGGATAGTGCAAATCAAAGGAGACTCCATGCTTTTCTATTCAAGAACACAACCCACATTCCCCTCCCTTACCTAACCGTCAAAAAAAAAACTCATCTATTTCCTCTCTACCCGCCTCCATCAAAGAATAACATTCATCAATCGATCACCACCGTCACCGATCTTCTTGCTGGCAAACAATCCGTGTCATCGTTGTGTTGCCACCGCAACTGCCTTCGAGTGCTTGTCAGAGCAACATGA

Protein sequence

MTSSGTGILDSANQRRLHAFLFKNTTHIPLPYLTVKKKTHLFPLYPPPSKNNIHQSITTVTDLLAGKQSVSSLCCHRNCLRVLVRAT
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo18988.1Spo18988.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo18988.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo18988.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo18988.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo18988.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
RNA-Seq Expression
   



Co-expression
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