Spo19038 (gene) | SpinachBase

Overview


Name	Spo19038
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	CASP-like protein
Location	chr3 : 9691259 .. 9695578 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCAAATATAATGATGAATGATAGCTTTGACCTTTTGATTTTCAGCCAAGATTGAGTAGCTCACAAAATACCCTTTGCCAATTTTCCTTGCCTTACACCCTTAATCAATTAAAACTAATCATTACTTCTTTCCCATTTTAGAGTTATTTCCTGTAATTTCTTCCATCAAATCCCTAATCACCCAAATTCCCAAAATCAGTTTGGACACCCTCCTCTGTTTTTGCTCTGTTTCCCATCAAATTTCCAAGCCCATCCCCTTTATTTTTTCTGGGTATGATTGAATTTGTGTTCTGATGTGGATTTTTGTAATGGGTATTTGAGAAATTGTTTGATTTTGGTTTGGGAAAGAAGAAAAATGAAGGATTTTGCAGGAACACCAGGAACTATAACTGGGTTTGTTTTAAGGATTGCTCAATTTATGTTTGCTGCTGGTTCTATTGCTTCTATGGCAACCACTTCTAGCTTCTATAATTTCACTGCTTTCTGGTATTTTATTCACTTCTTTCAATTAAGTAATTCGTTTTTATCATGTTGTTTATTACACCCTTTGTCCGGATATAATTGGTTACTAATTCAAATTACATTATCTACGTGGTATATGATTATTAATGGGGGATTAGTGGACTACATCTTTTATTCTGTATTTTCTGTTTAATTTGATGTTAAATAGCCAGGCATGTGTTTATTTTGATCGTACATGGATAAAAATTGCATGTTGTAATAAACATTGTTTGTGAACTAACATTTTCTCTTAGCCTAATTAGACTTATCTTTTTCGTTTAGGAATAAGCCACAAGTTCAATACTCGGTATAAATTATAAATAGGGAAGAGGGGATTCCAATCCTGAAACTTATACTTCCTCCGCTTCAAAATAGTTGCAACACTTTGTTTTTTGCACTATTCGCGTAATCTACTTTGTTTAATTTCGATGATCTATACTTTAGGAAAAATATATTTACGTGGAATCTTGTTAGATTCGTCTTAATGTATATTTTGCGAAAATCAATTTTTATAATTTTTAAATATCGGTGATTAAATATGTTAATCGTTCAAGATATGCATTGGCAAGCGTGCAAAACAAAGTGTTGCAACTAAAAAGAATCAGAGGAAGTAGTATGCATTGGCACTCAGTCTTCAGTCTTAACCACTAGGTTAAGATCTTATTTGTCCTGATTAGACTTATCTAAAATGGGGTTTTCCTTTTATATGTATTGGTGTATATAATCTTTAGGCTATTGGAATATAGTTACTTTCCTTGGTTATTTTTTGTACAGCAAATAAACAAATCCATGGTTATATAGTTTTCATTTTTAGCATTGTTTAGTATAACTAAAAAGACTTATACAAAACAGGAAATCAAAAACTTCATGTGCCATGTTTATGGATGAAAGGTGCTGATTAGTACTCTACTGAACTGTGAAGTAGCTAGTCTGATTGCGATTTTGCGAAGACAGTATTTGTTCCTTGGCTGTAGTTTCAATTTATTCAGAACTTTTTTCAACATCCAATTCCTTACTTTAGGTTCTTCTTTCAATGGTCATAAAATTTTGTTCCTTAATCATTAGTCTCTTCCTAGGATGACTTATCTTTCCCATAATTTCCCGAGTTTTTCTTTACCTCTCATACTTATTCCTTATCGCCTTTTTAGTGCAGGACAGGAGCTAGTCTTTCTTGGCCATCTATGTCATTTTCATAAAATTCTTATATACTGTACTGTTTTTTGGTGATTCCATTACTAGTGGCTACCGAAAACTAAGAACACGATATGATTCTTCTTAGCGAGAACAAGTTAAGTACTAATACGCATGAACTTTTGTGACGACATCTAGGAGTTGTTACAAAATCCTTTGAAACTCTAGCAGAAAACTGCATACTTTAATCCAGTATAGTAATTTTCAAGCCTCTAAACCACCCGTCTGAATCATCATAATTCTATTATTTCATGTATAATGATGTGGATTCCTCTTTACCAGTGTGTTTACTTGCTTAATTACACTGTGATCATATTAAGACAAAGACTGAAAGAAGAAAATTGAGGAGTTTCGTATGGAGCCTTCGTTTAGATTTCATACTGAAAACCCTGCAAACTGAAACATAAAGACTTGATTATTAGCTTACAAACCATGTATAAGAACTTCTGGTAATCTGCATAATCTGTTCATTTAAACTGTAAGAAATAATTCAAAAACTTGTACAAGGAAAATGGTCACTTTTCAGCTTTTTGATGCATAATGTTGTACTCTCTGTAACACGTATTGCCTTTGCAGCTATCTAATAATGTTTCATCCTTGTATTTGGAGGGATTTCAGACGAATGACTGAAACACATATTGCCTTTTGCAGCTATCTAATAGCTGCCATGGGTTTGCAAGTAATATGGAGCTTAAGCCTCGCTTTGATGGATGCCTATGCACTAGCGAAGAAAAGAGTGCTCCACAATTCAATCCTTGTTAGCCTTTTTGTAATCGGAGATTGGGTAGGCTTCCTGTTATTACTTGATACTTCCTGAATTTAACAATTACTGTCTTTGTCTGTGTTAGACTATTCATTTTAACTCGATCAAGTACCCTTGTCACGTCAAGATATCCTCAAACTTCAATGTGTATAGACAATTCACAATTCATTAGACCAAAATATAGAAATATTTTGATGAAATCGCAGAGTCAGAAACTTGGACACATACATGAGTTCGACATGGGTATGTGAGTCCGGGTAAATTAGGTCTTATCATAGAGCCCTTTAAGGTCATCATACTGACTGAATTTGTTATTTTAGACAACAGACAGTCAATTTGAGGACTGAACTAGAAACTAGGAGAATCATTAAGATAGGGAGGAAGTATATATATTTCTTAAGTTCTAATAAGTTCTGATAAGATAAATTCAGGAAAAATAAGTAAAAATCAGGTGAATAGAATGCACCCTAAGTTGCATCAACTAAAAAGCAAGGTTTATAAGGCACAACTTTGACAATGAGTGATTTGCTAACAGGTAACGGCTACATTGTCTCTTGCAGCAGCTTCTGCATCTGCAGGAATTACGATCCTGTACTTCCATGATATCGGAGACTGTACCATCGTAGCAGAATGCTTCAAGTATCAGCTTGCAGTTTCTTTAGCCTTTCTAAGTTGGCTAACAGTTTTCCCTTCATTTCTCATCATGTTATTGCTTCTAGGGTTCTAGCAGCAAGCTAGATAATCTTCTTGCTTCGGATTCTGTACACGAAATGCAGTACATTTTTACACTGTAAATAGAAACAAAATGACATCAAAGTATAGGGAGGAGGAGATTGATTCTCATTTTTTTTTCCTTCCCCTTCTTTTATGTTTGTATAGCTCATGTCAATTCATCACACTTGTAATCCAGAAAGGAATACTCATTTGTATTTACCCAAATTTTGAGAAATTAAGTAAACCATTACATACCATAAGTTCATGTAACTACTATAATTTTATCAAAATATATTGATAAAAGACGGTGAATGTTAGAAAGAATGGCCTAACATAAAACTCCTGAAGATTACCAGCATATCTGCTAGTATAATGCAATGCTATCTACCATATTCGACAGAATTATTCCTGAAGTACAAACTTTTGTAGTTGTGAAGTTTATGATGCATAACACGGAATCTCGTAATCATGATTCTCTGAAGCTGGCCTGGAACAAGATGCTAACAGTGAAAGGACATTCAATAATGAGGAATAATATGAGATTAAACCACCTATTTTACTGTATTTAAATGAGGTTCAATATCGAAACTTGACACGAAAATAGCAGGAAGCTAAGTAATGGCTACGAGTAATAGTAACATTAGAAGCTTTTACTTGAGGTTCAAGCCACACATGTTCATGATCCTATCACAGATAGGCTGGACTTTACTGTATTTCATCACTGAAGCATCCTTTAATCATGGGATGAATCCTTACGTTTACATAACTTACCGCCATGTCGTTGCTGGGGTGGTGATGTTCCCCTTTGCCTATTTTCTAGAGAGGTTGTTTTTATTTTACCATATTAACATATTCTTGATACTGCATCTTTTATACTGTATAACTTAGCCAGTAAAATTTGAATTCTTCTGTATCATGCAGAAAAGCAAGGCCAAAGTTGACAGTAGCTCTAATTGCAGAAATATTTGTGCTCTCTCTCCTAGGGTAAGCCTACAAGAGTGATGATATACAACTAAATATTGTAACGATGTTCCAAAATTTCACAGTATCCACAGTATCATGATACATTCAGGATTCATATCTTACATTACAGAATTTCACAGGTAACTATTTGCTGCTAATTTTGGCAGGGTAGGATTGGCGCTTAA

mRNA sequence

ATGATCAAATATAATGATGAATGATAGCTTTGACCTTTTGATTTTCAGCCAAGATTGAGTAGCTCACAAAATACCCTTTGCCAATTTTCCTTGCCTTACACCCTTAATCAATTAAAACTAATCATTACTTCTTTCCCATTTTAGAGTTATTTCCTGTAATTTCTTCCATCAAATCCCTAATCACCCAAATTCCCAAAATCAGTTTGGACACCCTCCTCTGTTTTTGCTCTGTTTCCCATCAAATTTCCAAGCCCATCCCCTTTATTTTTTCTGGGTATGATTGAATTTGTGTTCTGATGTGGATTTTTGTAATGGGTATTTGAGAAATTGTTTGATTTTGGTTTGGGAAAGAAGAAAAATGAAGGATTTTGCAGGAACACCAGGAACTATAACTGGGTTTGTTTTAAGGATTGCTCAATTTATGTTTGCTGCTGGTTCTATTGCTTCTATGGCAACCACTTCTAGCTTCTATAATTTCACTGCTTTCTGGACAGGAGCTAGTCTTTCTTGGCCATCTATCTATCTAATAGCTGCCATGGGTTTGCAAGTAATATGGAGCTTAAGCCTCGCTTTGATGGATGCCTATGCACTAGCGAAGAAAAGAGTGCTCCACAATTCAATCCTTAAAAGCAAGGCCAAAGTTGACAGTAGCTCTAATTGCAGAAATATTTGTGCTCTCTCTCCTAGGGGTAGGATTGGCGCTTAA

Coding sequence (CDS)

ATGAAGGATTTTGCAGGAACACCAGGAACTATAACTGGGTTTGTTTTAAGGATTGCTCAATTTATGTTTGCTGCTGGTTCTATTGCTTCTATGGCAACCACTTCTAGCTTCTATAATTTCACTGCTTTCTGGACAGGAGCTAGTCTTTCTTGGCCATCTATCTATCTAATAGCTGCCATGGGTTTGCAAGTAATATGGAGCTTAAGCCTCGCTTTGATGGATGCCTATGCACTAGCGAAGAAAAGAGTGCTCCACAATTCAATCCTTAAAAGCAAGGCCAAAGTTGACAGTAGCTCTAATTGCAGAAATATTTGTGCTCTCTCTCCTAGGGGTAGGATTGGCGCTTAA

Protein sequence

MKDFAGTPGTITGFVLRIAQFMFAAGSIASMATTSSFYNFTAFWTGASLSWPSIYLIAAMGLQVIWSLSLALMDAYALAKKRVLHNSILKSKAKVDSSSNCRNICALSPRGRIGA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo19038.1	Spo19038.1	mRNA

Homology

[Close]

BLAST of Spo19038.1 vs. NCBI nr
Match: gi|870865599|gb|KMT16649.1| (hypothetical protein BVRB_3g049350 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 125.9 bits (315), Expect = 4.400e-26
Identity = 71/91 (78.02%), Postives = 74/91 (81.32%), Query Frame = 1


		  
Query: 1  MKDFAGTPGTITGFVLRIAQFMFAAGSIASMATTSSFYNFTAFWTGASLSWPSIYLIAAM 60
          MKDFAGTPGT+TG  LRIAQFMFAAGSIASMATTSSF+NFTAF           YLIA+M
Sbjct: 1  MKDFAGTPGTLTGLALRIAQFMFAAGSIASMATTSSFFNFTAF----------CYLIASM 60

Query: 61 GLQVIWSLSLALMDAYALAKKRVLHNSILKS 92
          GLQVIWS  LALMDAYALAKKRVLHN IL S
Sbjct: 61 GLQVIWSFGLALMDAYALAKKRVLHNPILVS 81

[Close]

BLAST of Spo19038.1 vs. NCBI nr
Match: gi|731320901|ref|XP_010671058.1| (PREDICTED: CASP-like protein 5B3 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 125.9 bits (315), Expect = 4.400e-26
Identity = 71/91 (78.02%), Postives = 74/91 (81.32%), Query Frame = 1


		  
Query: 1  MKDFAGTPGTITGFVLRIAQFMFAAGSIASMATTSSFYNFTAFWTGASLSWPSIYLIAAM 60
          MKDFAGTPGT+TG  LRIAQFMFAAGSIASMATTSSF+NFTAF           YLIA+M
Sbjct: 14 MKDFAGTPGTLTGLALRIAQFMFAAGSIASMATTSSFFNFTAF----------CYLIASM 73

Query: 61 GLQVIWSLSLALMDAYALAKKRVLHNSILKS 92
          GLQVIWS  LALMDAYALAKKRVLHN IL S
Sbjct: 74 GLQVIWSFGLALMDAYALAKKRVLHNPILVS 94

[Close]

BLAST of Spo19038.1 vs. NCBI nr
Match: gi|223531221|gb|EEF33066.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 113.6 bits (283), Expect = 2.300e-22
Identity = 63/91 (69.23%), Postives = 73/91 (80.22%), Query Frame = 1


		  
Query: 1  MKDFAGTPGTITGFVLRIAQFMFAAGSIASMATTSSFYNFTAFWTGASLSWPSIYLIAAM 60
          MKDFAGTPGT+T  VLRI+Q +FAAGSI +MATTS+F+NFTAF           YLIA+M
Sbjct: 1  MKDFAGTPGTLTALVLRISQCIFAAGSITAMATTSTFFNFTAF----------CYLIASM 60

Query: 61 GLQVIWSLSLALMDAYALAKKRVLHNSILKS 92
          GLQVIWSL LAL+DAYAL +K+VLHNSIL S
Sbjct: 61 GLQVIWSLGLALLDAYALIRKKVLHNSILVS 81

[Close]

BLAST of Spo19038.1 vs. NCBI nr
Match: gi|1000946338|ref|XP_002529297.2| (PREDICTED: CASP-like protein 5B3 isoform X1 [Ricinus communis])

HSP 1 Score: 113.6 bits (283), Expect = 2.300e-22
Identity = 63/91 (69.23%), Postives = 73/91 (80.22%), Query Frame = 1


		  
Query: 1  MKDFAGTPGTITGFVLRIAQFMFAAGSIASMATTSSFYNFTAFWTGASLSWPSIYLIAAM 60
          MKDFAGTPGT+T  VLRI+Q +FAAGSI +MATTS+F+NFTAF           YLIA+M
Sbjct: 1  MKDFAGTPGTLTALVLRISQCIFAAGSITAMATTSTFFNFTAF----------CYLIASM 60

Query: 61 GLQVIWSLSLALMDAYALAKKRVLHNSILKS 92
          GLQVIWSL LAL+DAYAL +K+VLHNSIL S
Sbjct: 61 GLQVIWSLGLALLDAYALIRKKVLHNSILVS 81

[Close]

BLAST of Spo19038.1 vs. NCBI nr
Match: gi|1000946340|ref|XP_015580944.1| (PREDICTED: CASP-like protein 5B3 isoform X2 [Ricinus communis])

HSP 1 Score: 113.6 bits (283), Expect = 2.300e-22
Identity = 63/91 (69.23%), Postives = 73/91 (80.22%), Query Frame = 1


		  
Query: 1  MKDFAGTPGTITGFVLRIAQFMFAAGSIASMATTSSFYNFTAFWTGASLSWPSIYLIAAM 60
          MKDFAGTPGT+T  VLRI+Q +FAAGSI +MATTS+F+NFTAF           YLIA+M
Sbjct: 1  MKDFAGTPGTLTALVLRISQCIFAAGSITAMATTSTFFNFTAF----------CYLIASM 60

Query: 61 GLQVIWSLSLALMDAYALAKKRVLHNSILKS 92
          GLQVIWSL LAL+DAYAL +K+VLHNSIL S
Sbjct: 61 GLQVIWSLGLALLDAYALIRKKVLHNSILVS 81

[Close]

BLAST of Spo19038.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CX26_BETVU (CASP-like protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g049350 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.100e-26
Identity = 71/91 (78.02%), Postives = 74/91 (81.32%), Query Frame = 1


		  
Query: 1  MKDFAGTPGTITGFVLRIAQFMFAAGSIASMATTSSFYNFTAFWTGASLSWPSIYLIAAM 60
          MKDFAGTPGT+TG  LRIAQFMFAAGSIASMATTSSF+NFTAF           YLIA+M
Sbjct: 1  MKDFAGTPGTLTGLALRIAQFMFAAGSIASMATTSSFFNFTAF----------CYLIASM 60

Query: 61 GLQVIWSLSLALMDAYALAKKRVLHNSILKS 92
          GLQVIWS  LALMDAYALAKKRVLHN IL S
Sbjct: 61 GLQVIWSFGLALMDAYALAKKRVLHNPILVS 81

[Close]

BLAST of Spo19038.1 vs. UniProtKB/TrEMBL
Match: B9STH8_RICCO (CASP-like protein OS=Ricinus communis GN=RCOM_0491750 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.600e-22
Identity = 63/91 (69.23%), Postives = 73/91 (80.22%), Query Frame = 1


		  
Query: 1  MKDFAGTPGTITGFVLRIAQFMFAAGSIASMATTSSFYNFTAFWTGASLSWPSIYLIAAM 60
          MKDFAGTPGT+T  VLRI+Q +FAAGSI +MATTS+F+NFTAF           YLIA+M
Sbjct: 1  MKDFAGTPGTLTALVLRISQCIFAAGSITAMATTSTFFNFTAF----------CYLIASM 60

Query: 61 GLQVIWSLSLALMDAYALAKKRVLHNSILKS 92
          GLQVIWSL LAL+DAYAL +K+VLHNSIL S
Sbjct: 61 GLQVIWSLGLALLDAYALIRKKVLHNSILVS 81

[Close]

BLAST of Spo19038.1 vs. UniProtKB/TrEMBL
Match: I1LCC7_SOYBN (CASP-like protein OS=Glycine max GN=GLYMA_10G187800 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.100e-22
Identity = 62/91 (68.13%), Postives = 71/91 (78.02%), Query Frame = 1


		  
Query: 1  MKDFAGTPGTITGFVLRIAQFMFAAGSIASMATTSSFYNFTAFWTGASLSWPSIYLIAAM 60
          MKDF GTPGT+ G  LRI+QF+FAAGSIASMATT SF+NFTAF           YLIA+M
Sbjct: 1  MKDFPGTPGTVLGLALRISQFVFAAGSIASMATTPSFFNFTAF----------CYLIASM 60

Query: 61 GLQVIWSLSLALMDAYALAKKRVLHNSILKS 92
          GLQVIWS  LAL+DAYAL KK+VLHN++L S
Sbjct: 61 GLQVIWSFVLALLDAYALVKKKVLHNAVLVS 81

[Close]

BLAST of Spo19038.1 vs. UniProtKB/TrEMBL
Match: A0A0B2RBK2_GLYSO (CASP-like protein OS=Glycine soja GN=glysoja_034083 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.100e-22
Identity = 62/91 (68.13%), Postives = 71/91 (78.02%), Query Frame = 1


		  
Query: 1  MKDFAGTPGTITGFVLRIAQFMFAAGSIASMATTSSFYNFTAFWTGASLSWPSIYLIAAM 60
          MKDF GTPGT+ G  LRI+QF+FAAGSIASMATT SF+NFTAF           YLIA+M
Sbjct: 1  MKDFPGTPGTVLGLALRISQFVFAAGSIASMATTPSFFNFTAF----------CYLIASM 60

Query: 61 GLQVIWSLSLALMDAYALAKKRVLHNSILKS 92
          GLQVIWS  LAL+DAYAL KK+VLHN++L S
Sbjct: 61 GLQVIWSFVLALLDAYALVKKKVLHNAVLVS 81

[Close]

BLAST of Spo19038.1 vs. UniProtKB/TrEMBL
Match: A0A0R0I0B0_SOYBN (CASP-like protein OS=Glycine max GN=GLYMA_10G187800 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.700e-22
Identity = 61/89 (68.54%), Postives = 70/89 (78.65%), Query Frame = 1


		  
Query: 1  MKDFAGTPGTITGFVLRIAQFMFAAGSIASMATTSSFYNFTAFWTGASLSWPSIYLIAAM 60
          MKDF GTPGT+ G  LRI+QF+FAAGSIASMATT SF+NFTAF           YLIA+M
Sbjct: 1  MKDFPGTPGTVLGLALRISQFVFAAGSIASMATTPSFFNFTAF----------CYLIASM 60

Query: 61 GLQVIWSLSLALMDAYALAKKRVLHNSIL 90
          GLQVIWS  LAL+DAYAL KK+VLHN++L
Sbjct: 61 GLQVIWSFVLALLDAYALVKKKVLHNAVL 79

[Close]

BLAST of Spo19038.1 vs. ExPASy Swiss-Prot
Match: CSPLG_ARATH (CASP-like protein 5B3 OS=Arabidopsis thaliana GN=At3g23200 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.400e-16
Identity = 49/91 (53.85%), Postives = 63/91 (69.23%), Query Frame = 1


		  
Query: 1  MKDFAGTPGTITGFVLRIAQFMFAAGSIASMATTSSFYNFTAFWTGASLSWPSIYLIAAM 60
          M D  GTPGT+TG VLRI+Q +FAAGSI+ M T+  F++FTAF           YLIAAM
Sbjct: 1  MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAF----------CYLIAAM 60

Query: 61 GLQVIWSLSLALMDAYALAKKRVLHNSILKS 92
          GLQVIWS  LA++D +AL +K+ L + +L S
Sbjct: 61 GLQVIWSFGLAILDTFALVRKKTLLSPVLVS 81

[Close]

BLAST of Spo19038.1 vs. ExPASy Swiss-Prot
Match: CSPLB_PICSI (CASP-like protein 5B1 (Fragment) OS=Picea sitchensis PE=2 SV=2)

HSP 1 Score: 79.7 bits (195), Expect = 2.300e-14
Identity = 48/91 (52.75%), Postives = 55/91 (60.44%), Query Frame = 1


		  
Query: 1   MKDFAGTPGTITGFVLRIAQFMFAAGSIASMATTSSFYNFTAFWTGASLSWPSIYLIAAM 60
           MKD  GTPGT+ G  LR+ QF+FAA S+  M T+  F NFTAF           YL AAM
Sbjct: 32  MKDLPGTPGTVGGLALRMGQFIFAAASVVIMVTSDEFINFTAF----------CYLAAAM 91

Query: 61  GLQVIWSLSLALMDAYALAKKRVLHNSILKS 92
            LQ +WS  LA +D YAL  KR L NSIL S
Sbjct: 92  ALQFLWSFVLATIDVYALLIKRGLPNSILLS 112

[Close]

BLAST of Spo19038.1 vs. ExPASy Swiss-Prot
Match: CSPL3_GINBI (CASP-like protein 5B1 OS=Ginkgo biloba GN=gba_locus_13664 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 8.600e-14
Identity = 45/91 (49.45%), Postives = 55/91 (60.44%), Query Frame = 1


		  
Query: 1   MKDFAGTPGTITGFVLRIAQFMFAAGSIASMATTSSFYNFTAFWTGASLSWPSIYLIAAM 60
           MK+  G PGTI G  LR+ QF+FAA +I  M T   F N+TAF           YL+AAM
Sbjct: 28  MKELPGMPGTIGGLALRVGQFLFAAAAIVIMVTGDEFTNYTAF----------CYLVAAM 87

Query: 61  GLQVIWSLSLALMDAYALAKKRVLHNSILKS 92
            LQ +WS  LA++D YAL  KR L NS+L S
Sbjct: 88  SLQFLWSFMLAILDTYALLIKRGLRNSVLLS 108

[Close]

BLAST of Spo19038.1 vs. ExPASy Swiss-Prot
Match: CSPLQ_ORYSJ (CASP-like protein 5B3 OS=Oryza sativa subsp. japonica GN=Os09g0249400 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.500e-13
Identity = 43/91 (47.25%), Postives = 58/91 (63.74%), Query Frame = 1


		  
Query: 1  MKDFAGTPGTITGFVLRIAQFMFAAGSIASMATTSSFYNFTAFWTGASLSWPSIYLIAAM 60
          MKD  G+PGT +G  LR++Q +FA  S+ +MA+   F N+TAF           YLIA+M
Sbjct: 1  MKDVVGSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAF----------CYLIASM 60

Query: 61 GLQVIWSLSLALMDAYALAKKRVLHNSILKS 92
          GLQ++WS  LA +D Y+L  KR LHN +L S
Sbjct: 61 GLQLLWSFGLACLDIYSLQTKRDLHNPVLVS 81

[Close]

BLAST of Spo19038.1 vs. ExPASy Swiss-Prot
Match: CSPLQ_ORYSI (CASP-like protein 5B3 OS=Oryza sativa subsp. indica GN=OsI_30532 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.500e-13
Identity = 43/91 (47.25%), Postives = 58/91 (63.74%), Query Frame = 1


		  
Query: 1  MKDFAGTPGTITGFVLRIAQFMFAAGSIASMATTSSFYNFTAFWTGASLSWPSIYLIAAM 60
          MKD  G+PGT +G  LR++Q +FA  S+ +MA+   F N+TAF           YLIA+M
Sbjct: 1  MKDVVGSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAF----------CYLIASM 60

Query: 61 GLQVIWSLSLALMDAYALAKKRVLHNSILKS 92
          GLQ++WS  LA +D Y+L  KR LHN +L S
Sbjct: 61 GLQLLWSFGLACLDIYSLQTKRDLHNPVLVS 81

[Close]

BLAST of Spo19038.1 vs. TAIR (Arabidopsis)
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 87.0 bits (214), Expect = 8.000e-18
Identity = 49/91 (53.85%), Postives = 63/91 (69.23%), Query Frame = 1


		  
Query: 1  MKDFAGTPGTITGFVLRIAQFMFAAGSIASMATTSSFYNFTAFWTGASLSWPSIYLIAAM 60
          M D  GTPGT+TG VLRI+Q +FAAGSI+ M T+  F++FTAF           YLIAAM
Sbjct: 1  MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAF----------CYLIAAM 60

Query: 61 GLQVIWSLSLALMDAYALAKKRVLHNSILKS 92
          GLQVIWS  LA++D +AL +K+ L + +L S
Sbjct: 61 GLQVIWSFGLAILDTFALVRKKTLLSPVLVS 81

[Close]

BLAST of Spo19038.1 vs. TAIR (Arabidopsis)
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 71.6 bits (174), Expect = 3.500e-13
Identity = 43/91 (47.25%), Postives = 55/91 (60.44%), Query Frame = 1


		  
Query: 1   MKDFAGTPGTITGFVLRIAQFMFAAGSIASMATTSSFYNFTAFWTGASLSWPSIYLIAAM 60
           M D  G PGT+ G  LR  QF+FAA ++  MA+TS F + TAF           YL+AA 
Sbjct: 29  MDDMEGMPGTLLGLALRFFQFLFAAAALCVMASTSDFPSVTAF----------CYLVAAT 88

Query: 61  GLQVIWSLSLALMDAYALAKKRVLHNSILKS 92
           GLQ +WSL+LA++D YA+  KR L N  L S
Sbjct: 89  GLQSLWSLALAMVDVYAIMVKRSLQNRRLVS 109

[Close]

BLAST of Spo19038.1 vs. TAIR (Arabidopsis)
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 66.6 bits (161), Expect = 1.100e-11
Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = 1


		  
Query: 1  MKDFAGTPGTITGFVLRIAQFMFAAGSIASMATTSSFYNFTAFWTGASLSWPSIYLIAAM 60
          MK   G+PGT++G +LR+ Q   AA SI  M ++  F N+TAF           +L+A+M
Sbjct: 1  MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAF----------CFLVASM 60

Query: 61 GLQVIWSLSLALMDAYALAKKRVLHNSILKS 92
          GLQ+IWS  LA +D YA+ +K  L + IL S
Sbjct: 61 GLQLIWSFGLACLDVYAIRRKSDLRSPILLS 81

[Close]

BLAST of Spo19038.1 vs. TAIR (Arabidopsis)
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 64.3 bits (155), Expect = 5.600e-11
Identity = 42/91 (46.15%), Postives = 50/91 (54.95%), Query Frame = 1


		  
Query: 1  MKDFAGTPGTITGFVLRIAQFMFAAGSIASMATTSSFYNFTAFWTGASLSWPSIYLIAAM 60
          MK   G PGT+ G +LRI Q   AA SI  M +   F   TAF           YLIA+M
Sbjct: 1  MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAF----------CYLIASM 60

Query: 61 GLQVIWSLSLALMDAYALAKKRVLHNSILKS 92
          GLQ++WS  LA +D YAL  K+ L N IL S
Sbjct: 61 GLQLLWSFGLACLDVYALRGKKDLQNPILVS 81

[Close]

BLAST of Spo19038.1 vs. TAIR (Arabidopsis)
Match: AT2G37200.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 62.4 bits (150), Expect = 2.100e-10
Identity = 39/86 (45.35%), Postives = 52/86 (60.47%), Query Frame = 1


		  
Query: 1   MKDFAGTPGTITGFVLRIAQFMFAAGSIASMATTSSFYNFTAFWTGASLSWPSIYLIAAM 60
           MKD  G PGT  G +LR++QF+ A  S++ M TTS F + TAF            L+ A+
Sbjct: 31  MKDVQGMPGTTGGLILRLSQFVPALISVSVMVTTSDFRSATAFCC----------LVLAV 90

Query: 61  GLQVIWSLSLALMDAYALAKKRVLHN 87
            LQ +WSLSL ++DAYAL  +R L N
Sbjct: 91  SLQSLWSLSLFIIDAYALLVRRSLRN 106

The following BLAST results are available for this feature:

BLAST of Spo19038.1 vs. NCBI nr
BLAST of Spo19038.1 vs. UniProtKB/TrEMBL
BLAST of Spo19038.1 vs. ExPASy Swiss-Prot
BLAST of Spo19038.1 vs. TAIR (Arabidopsis)

BLAST of Spo19038.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|870865599\|gb\|KMT16649.1\|	4.4e-26	78.0	hypothetical protein BVRB_3g04...	[more]
gi\|731320901\|ref\|XP_010671058.1\|	4.4e-26	78.0	PREDICTED: CASP-like protein 5...	[more]
gi\|223531221\|gb\|EEF33066.1\|	2.3e-22	69.2	conserved hypothetical protein...	[more]
gi\|1000946338\|ref\|XP_002529297.2\|	2.3e-22	69.2	PREDICTED: CASP-like protein 5...	[more]
gi\|1000946340\|ref\|XP_015580944.1\|	2.3e-22	69.2	PREDICTED: CASP-like protein 5...	[more]

BLAST of Spo19038.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0J8CX26_BETVU	3.1e-26	78.0	CASP-like protein OS=Beta vulg...	[more]
B9STH8_RICCO	1.6e-22	69.2	CASP-like protein OS=Ricinus c...	[more]
I1LCC7_SOYBN	2.1e-22	68.1	CASP-like protein OS=Glycine m...	[more]
A0A0B2RBK2_GLYSO	2.1e-22	68.1	CASP-like protein OS=Glycine s...	[more]
A0A0R0I0B0_SOYBN	2.7e-22	68.5	CASP-like protein OS=Glycine m...	[more]

BLAST of Spo19038.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
CSPLG_ARATH	1.4e-16	53.8	CASP-like protein 5B3 OS=Arabi...	[more]
CSPLB_PICSI	2.3e-14	52.7	CASP-like protein 5B1 (Fragmen...	[more]
CSPL3_GINBI	8.6e-14	49.4	CASP-like protein 5B1 OS=Ginkg...	[more]
CSPLQ_ORYSJ	1.5e-13	47.2	CASP-like protein 5B3 OS=Oryza...	[more]
CSPLQ_ORYSI	1.5e-13	47.2	CASP-like protein 5B3 OS=Oryza...	[more]

BLAST of Spo19038.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT3G23200.1	8.0e-18	53.8	Uncharacterised protein family...	[more]
AT2G28370.1	3.5e-13	47.2	Uncharacterised protein family...	[more]
AT5G02060.1	1.1e-11	42.8	Uncharacterised protein family...	[more]
AT3G53850.1	5.6e-11	46.1	Uncharacterised protein family...	[more]
AT2G37200.1	2.1e-10	45.3	Uncharacterised protein family...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Domain of unknown function DUF588	PFAM	PF04535	DUF588	coord: 7..86 score: 1.6
None	No IPR available	PANTHER	PTHR32021	FAMILY NOT NAMED	coord: 1..89 score: 1.0
None	No IPR available	PANTHER	PTHR32021:SF5	SUBFAMILY NOT NAMED	coord: 1..89 score: 1.0

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo01680	0.66	Barchart \| Table
Spo23708	0.66	Barchart \| Table