Spo19064 (gene)

Overview
NameSpo19064
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr3 : 10087760 .. 10090795 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCCTCGTCAAGTAAGTTTGGAGGGTGTGGACACACTTGCGCGAATTCTGGTAACGGCTACAAGGAAGAAATCGAAAGGAAACTCCAACCAGGGATGGACGTAAACTCGTAAGCTACCGAGGGTAGGGATAATCGTCTTATTGTGAAACAAAAAAGCCGCCCCGCCCCAGCAGGCGGGTTGGTTCCTCTGTCGTCACCTGGGAGCTCTTGGCGAGGAGACCTTAGGATAAGTTGCTAAAATAAAACAAACGGGAGGAGAGGTATGAAGTGACTCGACTGTAAGGAGAGGATCGACCCGTTCAGTCAAATTCCGAAGAAAGACTGTTGGCAGGAGGTGGAGACATTTCTGCGACCCCCTTCAAAAAAAAGGAAATGCGGGCAGGGTAGAGCTCCGCGGAGGTATCGAGAATAGCGTAAGGTCCTGTCCTTTAGATTCAGATAAAAAAAAGAGTTCTAAACCTTTCACAAGTGCTGCGTACAAGTTCCGGCCAGAATGATTGGGAAAGATAAACCAAATTGGAATTTGAACCGCTCACAACACAGTAGTAGTAGCGTAAAGGCCGTAAGTCGGGGAGCGGCCATAACAAAAATGACTTTCACATCTCTCTCTAGAGATCCATAGATATCTAGAGAGAGAGATCCGCCTGCGTGAGCAACCCGACGGTGTGTTACATGTGCTCTACAGGCCTCACTCCATCTTTCTTCCCAACGACTTTCTTTTTTTATTTGGAAGACGGCCTAAAAGCTTCGCTTTAGCTATAAAACAAGCAAGGGCTTTAGCGAGTTGCGCTAACGCGCTTTGGTCCGAAAGCTTCGCTTAAGCTCAAAAGCTCGAAGAGCTTTAGCGAGTCAACTACCTTACGTTCGGTTCGAAAGGCATGGTTTTGAGTATGTCTCAAAATGGGGCCCCCTCACTAGTCCGGCTAGCTAGTGAGCGGTTCTTTCGGGCGGGAAGCAGGCCGGGCCCTACGCGCGGGCATCCCCCGCAACACAAGCAGCATTGTTCGCCACTACCCGACAAGCAAAAGATTCGAGAGTCCAGGCTAAAAATACATGCATAGATAGTGGTCTAATGACAAGGGCCCACGACGGAAGCTCGGGACGGAGCCGTATGATGCGGAAGTATCACGTACGGTTCCCTGAGAAGGGAGTGGCTACATACTGGAGCTTCGACCAACCACTACCGGTCAATTCCGCTTTGGGGCTACCCCTTACTCTACCATTATTATAGGGGTATGGGGTTCGAGACAAAGAAAGATCAAGGCAGCATATCAGTTTTTCCTTTATACTTTACTTGGATCTGTTTTTATGCTATTAGCTATTCTGTTGATTCTTCTCCAAACAGGAACTACCGATTTACAAATATTATTAACCACAGAATTTAGTGAGCGGCGCCAAATCTTTTTATGGATTGCTTTTTTCGCCTCTTTCGCTGTCAAAGTTCCTATGGTACCAGTTCATATTTGGTTACCTGAAGCTCATGTAGAGGCACCCACGGCAGGATCCGTTATCTTGGCAGGAATTCTTTTAAAATTGGTAACTTACGGGTTTTTAAGATTTTCAATACCCATGTTTCCTGAAGCGACACTTTGTTTCACTCCTTTCATTTATACTCTAAGCGTGATTGCTATAATATATACTTCCTTGACCACTTTAAGACAGATCGATCTTAAGAAGATCATTGCTTACTCCTCAGTAGCCCATATGAATTTTGTGACTATTGGTATGTTTAGTCTGAACATACAGGGAATTGGAGGTAGCATTCTACCGATGTTAAGTCATGGACTGGTTTCTTCAGCCCTTTTTCTATGTGTTGGTGTTCTATATGACCGACATAAGACTCGACTTGTTAGATATTACGGAGGTTTAGTGAGCACCATGCCGAATTTCTCTACCATTTTCTTCTTTTTCACTTTAGCCAATATGAGTTTACCTGGTACTAGCAGCTTTATCGGGGAATTTCTCATCTTAGTAGGAGCTTTCCAAAGAAATAGCTTAGTAGCCACATTAGCAGCGCTTGGGATGATTTTAGGCGCGGCCTATTCCCTTTGGCTATATAATCGTGTGGTTTCTGAAAATTTAAAACCCGACTTCCTCCATAAATTCTCCGATCCAAATGGCAGAGAAGTTTTCATATTTATACCCTTTCTTGTTGGAGGGGCGACCGCCCGTTAAACTACCAAAGAAAAAAAAAGGGTAAACCAATGTGATCATGACATTGTAGGTGCTTGCGATGGGACGGATGTGACTTCCCTCAGTTGGTTTGGGTGGCATAGCCCGTTGCGGAAGTCCCCCCCCCCTTTTTTTTGATCCATTTCTTTAGTCTTTAGGGACCCAAAGCTTGACTTTTCAAATAAGGCTCGCGCAGGGGCGCTCACGTTTTTTGGCTGAGCCGTATCTTGTTGGGTGAGACCGAGAGAAAGAAATGACAGAGGTTACCCTCGTAATGGCATTTCTCGACCGTGTCTTCGAGGGACAGTTGAACGAGCGACTCATGAATGCTGCCAGATCGAACGAGCCAATAATTCGAACGCTTTCGGTCTGTTTTTTGAGCAAGAATCACAGTGTTACCTTACCTTCACCAAGATACAGACTCCAAGTTCTTATGGAAGAGCACGAGGAGATTTTTCATCAATATGATGATGAGAATAGAAACCAGAAGCACGACCGGAGTCTTCGTGGTCCAAGATAAGAAAACCATCAATAAGAGTAACGTAAGCATGAGACTTTTTGGTAGTACCGGTGAACCATATGGTCGCGGCGATAGAATCTGGGACGGAGGACTCGTAGTATCTCTCTAGATCTTGCAAAAGCGAAAGACCCCCTAACTTTGAATGGAGGCTGACTGCTGAGCCCACTCAGGCCTCGAAGGGCAAGCCCCCGTGGTTGCGAGCTGGAGCTGCCATTGCTTATGGCTAGAGCAATGGGAGGGGCCCCCCGCAGAGAGAACAGTAAGGATAACGAGCGCTCCGCCCGCTTGGCGGGCGGCAGGAGCTGCAGGCAAGTGCTTGGTAGGCTAATAGCCCAGTGA

mRNA sequence

ATGGATTCCTCGTCAAGTAAGTTTGGAGGGTGTGGACACACTTGCGCGAATTCTGGTAACGGCTACAAGGAAGAAATCGAAAGGAAACTCCAACCAGGGATGGACGTAAACTCGCCTCGAAGGGCAAGCCCCCGTGGTTGCGAGCTGGAGCTGCCATTGCTTATGGCTAGAGCAATGGGAGGGGCCCCCCGCAGAGAGAACAGTAAGGATAACGAGCGCTCCGCCCGCTTGGCGGGCGGCAGGAGCTGCAGGCAAGTGCTTGGTAGGCTAATAGCCCAGTGA

Coding sequence (CDS)

ATGGATTCCTCGTCAAGTAAGTTTGGAGGGTGTGGACACACTTGCGCGAATTCTGGTAACGGCTACAAGGAAGAAATCGAAAGGAAACTCCAACCAGGGATGGACGTAAACTCGCCTCGAAGGGCAAGCCCCCGTGGTTGCGAGCTGGAGCTGCCATTGCTTATGGCTAGAGCAATGGGAGGGGCCCCCCGCAGAGAGAACAGTAAGGATAACGAGCGCTCCGCCCGCTTGGCGGGCGGCAGGAGCTGCAGGCAAGTGCTTGGTAGGCTAATAGCCCAGTGA

Protein sequence

MDSSSSKFGGCGHTCANSGNGYKEEIERKLQPGMDVNSPRRASPRGCELELPLLMARAMGGAPRRENSKDNERSARLAGGRSCRQVLGRLIAQ
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo19064.1Spo19064.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo19064.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19064.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19064.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19064.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0015979 photosynthesis
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0006814 sodium ion transport
biological_process GO:0009451 RNA modification
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0006120 mitochondrial electron transport, NADH to ubiquinone
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0005730 nucleolus
cellular_component GO:0005739 mitochondrion
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0009507 chloroplast
cellular_component GO:0009522 photosystem I
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
molecular_function GO:0019843 rRNA binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0032549 ribonucleoside binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
molecular_function GO:0003735 structural constituent of ribosome
RNA-Seq Expression