Spo19078 (gene) | SpinachBase

Overview


Name	Spo19078
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	ATP synthase subunit 9, mitochondrial
Location	chr3 : 10045442 .. 10045921 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGAAGGTGCAAAATCAATAGGTGCCGGAGCTGCTACAATTGCTTCAGCGGGAGCTGCTATCGGTATTGGGAACGTTTTTAGTTCCTCGATCCATTCCGTGGCGCGAAATCCGTCATTGGCGAAACAATTATTTGGTTATGCTATTTTGGGCTTTGCTTTAACCGAAGCGATCGCCCTGTTTGCCCTAATGATGGCCTTTTTGATTTCATTCGTATTCCGATTTTTATTTTCAAAGAAAGGGGAGCTGGCGGGGCCCCCAGTCGAGTAACAGACTGAAAGGGTTTGTGAGGTTCCTGCTAGGTTGTTTACATGCTTACTTGTTTGAGTAAGGTCTCACTCTAGTGGGAAGAAGGCAGGTGGGAACGAGCGGAGCGAGAGCAAGTTCCAGTGGCGGGCTGTCTTCATTGTCCCCCAAAAAGATCATGGTATAGAACTCGATGTAGTGCTTTTGGTGCTTTCTCGATCAACTATCTAA

mRNA sequence

ATGTTAGAAGGTGCAAAATCAATAGGTGCCGGAGCTGCTACAATTGCTTCAGCGGGAGCTGCTATCGGTATTGGGAACGTTTTTAGTTCCTCGATCCATTCCGTGGCGCGAAATCCGTCATTGGCGAAACAATTATTTGGTTATGCTATTTTGGGCTTTGCTTTAACCGAAGCGATCGCCCTGTTTGCCCTAATGATGGCCTTTTTGATTTCATTCGTATTCCGATTTTTATTTTCAAAGAAAGGGGAGCTGGCGGGGCCCCCAGTCGAGTCTCACTCTAGTGGGAAGAAGGCAGGTGGGAACGAGCGGAGCGAGAGCAAGTTCCAGTGGCGGGCTGTCTTCATTGTCCCCCAAAAAGATCATGGTATAGAACTCGATGTAGTGCTTTTGGTGCTTTCTCGATCAACTATCTAA

Coding sequence (CDS)

ATGTTAGAAGGTGCAAAATCAATAGGTGCCGGAGCTGCTACAATTGCTTCAGCGGGAGCTGCTATCGGTATTGGGAACGTTTTTAGTTCCTCGATCCATTCCGTGGCGCGAAATCCGTCATTGGCGAAACAATTATTTGGTTATGCTATTTTGGGCTTTGCTTTAACCGAAGCGATCGCCCTGTTTGCCCTAATGATGGCCTTTTTGATTTCATTCGTATTCCGATTTTTATTTTCAAAGAAAGGGGAGCTGGCGGGGCCCCCAGTCGAGTCTCACTCTAGTGGGAAGAAGGCAGGTGGGAACGAGCGGAGCGAGAGCAAGTTCCAGTGGCGGGCTGTCTTCATTGTCCCCCAAAAAGATCATGGTATAGAACTCGATGTAGTGCTTTTGGTGCTTTCTCGATCAACTATCTAA

Protein sequence

MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIALFALMMAFLISFVFRFLFSKKGELAGPPVESHSSGKKAGGNERSESKFQWRAVFIVPQKDHGIELDVVLLVLSRSTI

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo19078.1	Spo19078.1	mRNA

Homology

[Close]

BLAST of Spo19078.1 vs. NCBI nr
Match: gi|902196213|gb|KNA13070.1| (hypothetical protein SOVF_120120 [Spinacia oleracea])

HSP 1 Score: 160.6 bits (405), Expect = 1.900e-36
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 1

		  
Query: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIA 60
          MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIA
Sbjct: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIA 60

Query: 61 LFALMMAFLISFVFRFLFSKKGELAGPPVE 91
          LFALMMAFLISFVFRFLFSKKGELAGPPVE
Sbjct: 61 LFALMMAFLISFVFRFLFSKKGELAGPPVE 90

[Close]

BLAST of Spo19078.1 vs. NCBI nr
Match: gi|346683245|ref|YP_004842177.1| (hypothetical protein BemaM_p133 (mitochondrion) [Beta macrocarpa])

HSP 1 Score: 146.4 bits (368), Expect = 3.800e-32
Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 1

		  
Query: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIA 60
          MLEGAKSIGAGAATIASAGAAIGIGNVFSS IHSVARNPSLAKQLFGYAILGFALTEAIA
Sbjct: 6  MLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIA 65

Query: 61 LFALMMAFLISFVFRFLFSKKGELAGPPVESH 93
          LFALMMAFLISFVFRF FSKKG+LAGP  +S+
Sbjct: 66 LFALMMAFLISFVFRF-FSKKGKLAGPQFKSN 96

[Close]

BLAST of Spo19078.1 vs. NCBI nr
Match: gi|114496|sp|P14571.1|ATP9_BETVU (RecName: Full=ATP synthase subunit 9, mitochondrial; AltName: Full=Lipid-binding protein)

HSP 1 Score: 138.7 bits (348), Expect = 7.800e-30
Identity = 81/89 (91.01%), Postives = 83/89 (93.26%), Query Frame = 1

		  
Query: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIA 60
          MLEGAKSIGAGAATIASAGAAIGIGNVFSS IHSVARNPSLAKQLFGYAILGFAL+E IA
Sbjct: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALSELIA 60

Query: 61 LFALMMAFLISFVFRFLFSKKGELAGPPV 90
          LFALMMAFLI F FRF FSKKG+LAG PV
Sbjct: 61 LFALMMAFLILFAFRF-FSKKGKLAGAPV 88

[Close]

BLAST of Spo19078.1 vs. NCBI nr
Match: gi|887515679|gb|AKQ51081.1| (ATP synthase subunit 9 (mitochondrion) [Cuscuta gronovii])

HSP 1 Score: 127.1 bits (318), Expect = 2.400e-26
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1

		  
Query: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIA 60
          MLEGAKS+GAGAATIASAGAA+GIGNV SSSIHSVARNPSLAKQLFGYAILGFALTEAIA
Sbjct: 1  MLEGAKSMGAGAATIASAGAAVGIGNVLSSSIHSVARNPSLAKQLFGYAILGFALTEAIA 60

Query: 61 LFALMMAFLISFVFR 76
          LFALMMAFLISFVFR
Sbjct: 61 LFALMMAFLISFVFR 75

[Close]

BLAST of Spo19078.1 vs. NCBI nr
Match: gi|54606730|dbj|BAD66753.1| (ATPase subunit 9 (mitochondrion) [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 126.3 bits (316), Expect = 4.000e-26
Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 1

		  
Query: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIA 60
          MLEGAKSIGAGAATIASAGAAIGIGNVFSS IHSVARNPSLAKQLFGYAILGFALTEAIA
Sbjct: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIA 60

Query: 61 LFALMMAFLISFVF 75
          LFALMMAFLISFVF
Sbjct: 61 LFALMMAFLISFVF 74

[Close]

BLAST of Spo19078.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R0M8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_120120 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.300e-36
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 1

		  
Query: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIA 60
          MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIA
Sbjct: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIA 60

Query: 61 LFALMMAFLISFVFRFLFSKKGELAGPPVE 91
          LFALMMAFLISFVFRFLFSKKGELAGPPVE
Sbjct: 61 LFALMMAFLISFVFRFLFSKKGELAGPPVE 90

[Close]

BLAST of Spo19078.1 vs. UniProtKB/TrEMBL
Match: E6ZDV2_BETVM (ATP synthase subunit 9, mitochondrial OS=Beta vulgaris subsp. maritima GN=orf111e PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.600e-32
Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 1

		  
Query: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIA 60
          MLEGAKSIGAGAATIASAGAAIGIGNVFSS IHSVARNPSLAKQLFGYAILGFALTEAIA
Sbjct: 6  MLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIA 65

Query: 61 LFALMMAFLISFVFRFLFSKKGELAGPPVESH 93
          LFALMMAFLISFVFRF FSKKG+LAGP  +S+
Sbjct: 66 LFALMMAFLISFVFRF-FSKKGKLAGPQFKSN 96

[Close]

BLAST of Spo19078.1 vs. UniProtKB/TrEMBL
Match: G2XLZ2_BETMA (ATP synthase subunit 9, mitochondrial OS=Beta macrocarpa GN=orf111e PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.600e-32
Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 1

		  
Query: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIA 60
          MLEGAKSIGAGAATIASAGAAIGIGNVFSS IHSVARNPSLAKQLFGYAILGFALTEAIA
Sbjct: 6  MLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIA 65

Query: 61 LFALMMAFLISFVFRFLFSKKGELAGPPVESH 93
          LFALMMAFLISFVFRF FSKKG+LAGP  +S+
Sbjct: 66 LFALMMAFLISFVFRF-FSKKGKLAGPQFKSN 96

[Close]

BLAST of Spo19078.1 vs. UniProtKB/TrEMBL
Match: A0A141BUM3_CUSGR (ATP synthase subunit 9, mitochondrial OS=Cuscuta gronovii GN=atp9 PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.600e-26
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 1

		  
Query: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIA 60
          MLEGAKS+GAGAATIASAGAA+GIGNV SSSIHSVARNPSLAKQLFGYAILGFALTEAIA
Sbjct: 1  MLEGAKSMGAGAATIASAGAAVGIGNVLSSSIHSVARNPSLAKQLFGYAILGFALTEAIA 60

Query: 61 LFALMMAFLISFVFR 76
          LFALMMAFLISFVFR
Sbjct: 61 LFALMMAFLISFVFR 75

[Close]

BLAST of Spo19078.1 vs. UniProtKB/TrEMBL
Match: Q5U6F4_BETVU (ATP synthase subunit 9, mitochondrial OS=Beta vulgaris subsp. vulgaris GN=atp9 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.800e-26
Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 1

		  
Query: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIA 60
          MLEGAKSIGAGAATIASAGAAIGIGNVFSS IHSVARNPSLAKQLFGYAILGFALTEAIA
Sbjct: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIA 60

Query: 61 LFALMMAFLISFVF 75
          LFALMMAFLISFVF
Sbjct: 61 LFALMMAFLISFVF 74

[Close]

BLAST of Spo19078.1 vs. ExPASy Swiss-Prot
Match: ATP9_BETVU (ATP synthase subunit 9, mitochondrial OS=Beta vulgaris GN=ATP9 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.900e-32
Identity = 81/89 (91.01%), Postives = 83/89 (93.26%), Query Frame = 1

		  
Query: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIA 60
          MLEGAKSIGAGAATIASAGAAIGIGNVFSS IHSVARNPSLAKQLFGYAILGFAL+E IA
Sbjct: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALSELIA 60

Query: 61 LFALMMAFLISFVFRFLFSKKGELAGPPV 90
          LFALMMAFLI F FRF FSKKG+LAG PV
Sbjct: 61 LFALMMAFLILFAFRF-FSKKGKLAGAPV 88

[Close]

BLAST of Spo19078.1 vs. ExPASy Swiss-Prot
Match: ATP9_VICFA (ATP synthase subunit 9, mitochondrial OS=Vicia faba GN=ATP9 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.600e-27
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 1

		  
Query: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIA 60
          MLEGAKSIGAGAATIASAGAA+GIGNVFSS IHSVARNPSLAKQLFGYAILGFALTEAIA
Sbjct: 1  MLEGAKSIGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIA 60

Query: 61 LFALMMAFLISFVF 75
          LFALMMAFLI FVF
Sbjct: 61 LFALMMAFLILFVF 74

[Close]

BLAST of Spo19078.1 vs. ExPASy Swiss-Prot
Match: ATP9_PEA (ATP synthase subunit 9, mitochondrial OS=Pisum sativum GN=ATP9 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.600e-27
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 1

		  
Query: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIA 60
          MLEGAKSIGAGAATIASAGAA+GIGNVFSS IHSVARNPSLAKQLFGYAILGFALTEAIA
Sbjct: 1  MLEGAKSIGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIA 60

Query: 61 LFALMMAFLISFVF 75
          LFALMMAFLI FVF
Sbjct: 61 LFALMMAFLILFVF 74

[Close]

BLAST of Spo19078.1 vs. ExPASy Swiss-Prot
Match: ATP9_SOYBN (ATP synthase subunit 9, mitochondrial OS=Glycine max GN=ATP9 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.600e-27
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 1

		  
Query: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIA 60
          MLEGAKSIGAGAATIASAGAA+GIGNVFSS IHSVARNPSLAKQLFGYAILGFALTEAIA
Sbjct: 1  MLEGAKSIGAGAATIASAGAAVGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIA 60

Query: 61 LFALMMAFLISFVF 75
          LFALMMAFLI FVF
Sbjct: 61 LFALMMAFLILFVF 74

[Close]

BLAST of Spo19078.1 vs. ExPASy Swiss-Prot
Match: ATP9_SOLLC (ATP synthase subunit 9, mitochondrial OS=Solanum lycopersicum GN=ATP9 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.400e-26
Identity = 70/74 (94.59%), Postives = 71/74 (95.95%), Query Frame = 1

		  
Query: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIA 60
          MLEGAK +GAGAATIA AGAAIGIGNVFSS IHSVARNPSLAKQLFGYAILGFALTEAIA
Sbjct: 1  MLEGAKLMGAGAATIALAGAAIGIGNVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIA 60

Query: 61 LFALMMAFLISFVF 75
          LFALMMAFLISFVF
Sbjct: 61 LFALMMAFLISFVF 74

[Close]

BLAST of Spo19078.1 vs. TAIR (Arabidopsis)
Match: AT2G07671.1 (ATP synthase subunit C family protein)

HSP 1 Score: 119.0 bits (297), Expect = 2.300e-27
Identity = 70/74 (94.59%), Postives = 70/74 (94.59%), Query Frame = 1

		  
Query: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIA 60
          MLEGAKSIGAGAATIASAGAAIGIGNVFSS IHSVARNPSLAKQ FGYAILGFALTEAIA
Sbjct: 12 MLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIA 71

Query: 61 LFALMMAFLISFVF 75
          LFA MMAFLI FVF
Sbjct: 72 LFAPMMAFLILFVF 85

[Close]

BLAST of Spo19078.1 vs. TAIR (Arabidopsis)
Match: ATMG01080.1 (mitochondrial F0-ATPase subunit 9)

HSP 1 Score: 119.0 bits (297), Expect = 2.300e-27
Identity = 70/74 (94.59%), Postives = 70/74 (94.59%), Query Frame = 1

		  
Query: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLAKQLFGYAILGFALTEAIA 60
          MLEGAKSIGAGAATIASAGAAIGIGNVFSS IHSVARNPSLAKQ FGYAILGFALTEAIA
Sbjct: 12 MLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLAKQSFGYAILGFALTEAIA 71

Query: 61 LFALMMAFLISFVF 75
          LFA MMAFLI FVF
Sbjct: 72 LFAPMMAFLILFVF 85

[Close]

BLAST of Spo19078.1 vs. TAIR (Arabidopsis)
Match: ATMG00040.1 (ATP synthase subunit C family protein)

HSP 1 Score: 72.8 bits (177), Expect = 1.900e-13
Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 1

		  
Query: 1  MLEGAKSIGAGAATIASAGAAIGIGNVFSSSIHSVARNPSLA 43
          MLEGAKSIGAGAATIASAGAAIGIGNVFSS IHSVARNPSLA
Sbjct: 12 MLEGAKSIGAGAATIASAGAAIGIGNVFSSLIHSVARNPSLA 53

The following BLAST results are available for this feature:

BLAST of Spo19078.1 vs. NCBI nr
BLAST of Spo19078.1 vs. UniProtKB/TrEMBL
BLAST of Spo19078.1 vs. ExPASy Swiss-Prot
BLAST of Spo19078.1 vs. TAIR (Arabidopsis)

BLAST of Spo19078.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902196213\|gb\|KNA13070.1\|	1.9e-36	100.	hypothetical protein SOVF_1201...	[more]
gi\|346683245\|ref\|YP_004842177.1\|	3.8e-32	92.3	hypothetical protein BemaM_p13...	[more]
gi\|114496\|sp\|P14571.1\|ATP9_BETVU	7.8e-30	91.0	RecName: Full=ATP synthase sub...	[more]
gi\|887515679\|gb\|AKQ51081.1\|	2.4e-26	96.0	ATP synthase subunit 9 (mitoch...	[more]
gi\|54606730\|dbj\|BAD66753.1\|	4.0e-26	98.6	ATPase subunit 9 (mitochondrio...	[more]

BLAST of Spo19078.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9R0M8_SPIOL	1.3e-36	100.	Uncharacterized protein OS=Spi...	[more]
E6ZDV2_BETVM	2.6e-32	92.3	ATP synthase subunit 9, mitoch...	[more]
G2XLZ2_BETMA	2.6e-32	92.3	ATP synthase subunit 9, mitoch...	[more]
A0A141BUM3_CUSGR	1.6e-26	96.0	ATP synthase subunit 9, mitoch...	[more]
Q5U6F4_BETVU	2.8e-26	98.6	ATP synthase subunit 9, mitoch...	[more]

BLAST of Spo19078.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
ATP9_BETVU	4.9e-32	91.0	ATP synthase subunit 9, mitoch...	[more]
ATP9_VICFA	1.6e-27	95.9	ATP synthase subunit 9, mitoch...	[more]
ATP9_PEA	1.6e-27	95.9	ATP synthase subunit 9, mitoch...	[more]
ATP9_SOYBN	1.6e-27	95.9	ATP synthase subunit 9, mitoch...	[more]
ATP9_SOLLC	1.4e-26	94.5	ATP synthase subunit 9, mitoch...	[more]

BLAST of Spo19078.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT2G07671.1	2.3e-27	94.5	ATP synthase subunit C family ...	[more]
ATMG01080.1	2.3e-27	94.5	mitochondrial F0-ATPase subuni...	[more]
ATMG00040.1	1.9e-13	97.6	ATP synthase subunit C family ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000454	ATPase, F0 complex, subunit C	PRINTS	PR00124	ATPASEC	coord: 8..27 score: 9.2E-31coord: 29..44 score: 9.2E-31coord: 46..71 score: 9.2
IPR000454	ATPase, F0 complex, subunit C	GENE3D	1.20.20.10		coord: 6..72 score: 2.6
IPR002379	V-ATPase proteolipid subunit C-like domain	PFAM	PF00137	ATP-synt_C	coord: 8..70 score: 3.4
IPR002379	V-ATPase proteolipid subunit C-like domain	unknown	SSF81333	F1F0 ATP synthase subunit C	coord: 3..72 score: 1.23
IPR020537	ATPase, F0 complex, subunit C, DCCD-binding site	PROSITE	PS00605	ATPASE_C	coord: 36..57 scor
None	No IPR available	HAMAP	MF_01396	ATP_synth_c_bact	coord: 6..73 score: 13
None	No IPR available	PANTHER	PTHR10031	ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIAL	coord: 1..74 score: 3.7
None	No IPR available	PANTHER	PTHR10031:SF10	SUBFAMILY NOT NAMED	coord: 1..74 score: 3.7

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0008380	RNA splicing
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006397	mRNA processing
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006412	translation
biological_process	GO:0008152	metabolic process
biological_process	GO:0009635	response to herbicide
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0009409	response to cold
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0055085	transmembrane transport
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0015979	photosynthesis
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006354	DNA-templated transcription, elongation
biological_process	GO:0009772	photosynthetic electron transport in photosystem II
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0009769	photosynthesis, light harvesting in photosystem II
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0030076	light-harvesting complex
cellular_component	GO:0005681	spliceosomal complex
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031966	mitochondrial membrane
cellular_component	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0000312	plastid small ribosomal subunit
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
cellular_component	GO:0005634	nucleus
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005773	vacuole
cellular_component	GO:0016020	membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0045157	electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0015078	proton transmembrane transporter activity
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0009678	hydrogen-translocating pyrophosphatase activity
molecular_function	GO:0004427	inorganic diphosphatase activity
molecular_function	GO:0010242	oxygen evolving activity
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0000287	magnesium ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo10627	0.76	Barchart \| Table
Spo24717	0.75	Barchart \| Table
Spo02203	0.74	Barchart \| Table
Spo19530	0.73	Barchart \| Table
Spo17010	0.72	Barchart \| Table
Spo16384	0.72	Barchart \| Table
Spo16196	0.71	Barchart \| Table
Spo24708	0.71	Barchart \| Table
Spo21595	0.71	Barchart \| Table
Spo25555	0.70	Barchart \| Table
Spo18244	0.70	Barchart \| Table
Spo22445	0.70	Barchart \| Table
Spo05455	0.70	Barchart \| Table
Spo24707	0.69	Barchart \| Table
Spo06200	0.69	Barchart \| Table
Spo20925	0.69	Barchart \| Table
Spo21171	0.68	Barchart \| Table
Spo06201	0.68	Barchart \| Table
Spo04278	0.68	Barchart \| Table
Spo26126	0.67	Barchart \| Table
Spo02851	0.67	Barchart \| Table
Spo03973	0.67	Barchart \| Table
Spo09567	0.67	Barchart \| Table
Spo16266	0.67	Barchart \| Table
Spo24718	0.67	Barchart \| Table
Spo19560	0.66	Barchart \| Table
Spo18253	0.66	Barchart \| Table
Spo02166	0.66	Barchart \| Table
Spo11122	0.65	Barchart \| Table
Spo04277	0.65	Barchart \| Table
Spo22572	0.65	Barchart \| Table