Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTAACAAAAAAAGAGAGAGATAGAATGTTGAGAAGAAAGCCAACAAAAATCGAAGTCAAATTAGAAGACAAAGAAGAACTCCAACAACTCCAATCTCGCTACACCACCCCTTCTTCCACCTCCAATACCGCCACCACCTCCGCCGCCGAAACTACCACTACCACTCTTCTCCAACACTTCGATCGCTCTTCCTCCAAACCCCAACGCATCGGTCTCTCTTCCCCTTAATTCCCCTAAAATGGAAGTGGAAGTCAAGCTAAGGCTCCCCGATTCCGCCGCTCACCAGTCTCTCTCAACCGTCCTATCGCCGTTCCTCCGCCGAACCCACTTCCAGCACAATGTCTTCTTCGACGGGGCTGCCTCCGAGCTCTCCTCCCGTCGCGCTGTTCTCCGTTTACGTTTCTACGGCGAAGATCCTGAGACAGCAGAACGCTGCGTTTCGAGCCTAAAAGCTAAAGCTGTCCTTGTCAATGGGGTTAGCAGAGTTGAGGAAGATGAGGAAGAGATTGACCCCTTTTTAGGACGGGAGATTTGCGCCAACCCGAATCTAATTGGGTCGTCAGAGTCCAGGGTTTTGAAGAGGGTGAGAGAAGAATTCGGGGTTAAGGAAAGTGGGTATGTTTGTTTAGGAGGGTTTAAGAATATAAGAGGGGTTTATGAATGGAAAGGCTTGGAATTGGAGGTGGATGAGACACTTTTCGATTTTGGGACTTTGTATGAGATTGAATGTGAGAGTTCCGAGCCCGAGAAAGCTAAGGAGATGATTGAAGAGCTCTTGAAGGATAATGGGATCCCTTATTCTTGTTCTAAGATGTCAAAATTTGCGATTTTCCGAGCCCGGGAGCTCCCATTGTGAGTAGTCTTGGATTTCATTGTCTTAGTGATATTTGCTTTGATGTTGTTTGTGTGCTTTGGTTTATGATTTTGTCACTTACTCATATACAAGTATTATGTTTGCTTGGCATGGTTTAGGTTATTGTGATATTTCATGATTTTGATTGCCTAACTACTATATTAGGCTATTAGCTATTGTGTATTTGTGTATTACTGATTCATTCGATATGAGGTATATGCTTTTATGAATGTCAAAAAAACCAAAAGAAAAGATATGAGGTATATGCTTTGATGATTGTTCAACTATCTTTTTGCATATGATGTTTAATTTCTTGGTAGTTTTGGTTGATTCTTCTATGAAGTAGTTAGAATTTGATGAACCTAGTCTTGTTGGTTACTAGAAGATGTACTCGTTTCGAATACATTTATGCCTCAACAAATGATAGTCTCTGAAGGATGAAGGCAAATTTCAGTTTAGTGCCATTAAGCGTTGATAGTTAACAATTTTCCAAGATTACTAACTGCAGAATTGGATGTTATCACTCAATTGAATACCGTTAAGCGTTGATACTTAGGTTCTGCAATGGCAATTTTGAGTTATCTTCTTGAGTACTAATTCTTGGGATCTTCTTTTCAATTTTTTTTTTACTGATGGTATATAATTGTTGTGAGGCTACTGTTGAGGTATAGCCTTATGAGTTTATGACTCAACCGTGTGCCTCGGGTGTAGTTTTAAATGCTATAATCAACATTGTTCATGGTCTACTGTGTATTGCATTCTTGAAATGATGCTTACATGCTAAAAACAAAGCATTGTTCGTTGGAAGATAAAATTCTGATAATTTTTGGTCTCATATAGTCAAGCGCTCTGTGTCTGTCCTGTTTTAGTCTTTTCCTTCACCCACATCAGCCGCTTCATTTTGGGAGTGGGGCATGGTGATAGATGAGTTTTTTTGGGATATCGAGTTAGCAACATTGGTAATGACTCAACCCTGCCCAGTGGAAGGATATTATTGGGGGATAATGGGTTAATATTAGATTGGCTTGAACTGCCATTGTGTGTCTGGAAAATCTTTAGGTAGAGGAAAGCAGAGATTTTTTGTTGCGACATCAATTTAGAAGATGAAGTCGATTTTATCAAACATAATAACCAGCTAGTATGTAGGCCTTTTGTTGAAGGGTTTCAGCATTCAGGAGGCTATGCCATATTTGTACCCTCCACTACGACAAGGACACACAAAAACTGTTTCTAGGCGATGGTGGTTGTATTACCGTATATGAACCATGCAATGTATAATCTTATTTTTTAAAAGGAGTTCACTCTTTGTGAAGAGCTACATGCTTTTGGTCTTCAAGCATCCAAAAATGATACTGATATGTAGTTTCCTTTTCAAAGTTTATCAATGAAGAAATTTTGGATATTTGGTTGTTCATCAAGGATTTTGTGGGCCAACCAGTATTTTTGTTTATAGGGCAATTGATAAAAAGAAGTTTGATGCAATTTTTGGGTTGCACATTTAGTACTTCTCTCTGATGTTATTTGCTGTGTAATGATGGAGTCCTTTTAAATTTTAATGCCCATCACCTATCTAGATCCTGTAATAGTAATATTGAGTTGAGGAGTTAATTTGGATCCTTTCTTAGTTTTTGTATACAACTGTTGTTAGGATGATCCTGTAATAGTAATATTGAGTCGAGGACAATAGTGACTCATTCGAACCACTGTTTTACTGGCTGCTGGCCCCAACATGTCGAGCATGTATCTATGCATCTTTTCTTTAACACACATTTCTGTTCTGCTTACTTGCACTTGATGCTCATGCATGCAATTTTCCCCCCTTCTGTTGCAGGCTCTGATCCAAGTAAAATACAGAATCTACATGGTGGCTTTTCATTGAAAAACGATCCATCCTAAGCATAGAAACTTGAGCATCAGCAGAAGGATGCAGCATCAGCATTTAGCAGGCTGACATATTTTCTGTATTTTGTCTTTTTGCCGTTTTATTTCTGTCGTAAATGATGATTAGCAATCATTAGCTGGCACAAACTCTTAGGTTAAACGAGTGTGCCTATTTATTGTAATGGCTTTGAGAATAAAAAGCATATTTTTCTCTCAAATATTATTGCAGTATATTTAACTTCCTCACATATGTGATATGTGAAGTCTAAACTCTAAACTCTAAACTCTAAACTCTAAACTCCTTGTGTTTGTCTGAGTAATAGTAAGGACTAAGGAGTCGTGAACTTGTCTCAAATATTAGTGCGATGGATTTCCCAGATTCAAAACTTGAAATATTTAACTTCCTGCTCTGTAAGTTTACTGTTTACACCAAG CTTTAACAAAAAAAGAGAGAGATAGAATGTTGAGAAGAAAGCCAACAAAAATCGAAGTCAAATTAGAAGACAAAGAAGAACTCCAACAACTCCAATCTCGCTACACCACCCCTTCTTCCACCTCCAATACCGCCACCACCTCCGCCGCCGAAACTACCACTACCACTCTTCTCCAACACTTCGATCGCTCTTCCTCCAAACCCCAACGCATCGGTCTCTCTTCCCCTTAATTCCCCTAAAATGGAAGTGGAAGTCAAGCTAAGGCTCCCCGATTCCGCCGCTCACCAGTCTCTCTCAACCGTCCTATCGCCGTTCCTCCGCCGAACCCACTTCCAGCACAATGTCTTCTTCGACGGGGCTGCCTCCGAGCTCTCCTCCCGTCGCGCTGTTCTCCGTTTACGTTTCTACGGCGAAGATCCTGAGACAGCAGAACGCTGCGTTTCGAGCCTAAAAGCTAAAGCTGTCCTTGTCAATGGGGTTAGCAGAGTTGAGGAAGATGAGGAAGAGATTGACCCCTTTTTAGGACGGGAGATTTGCGCCAACCCGAATCTAATTGGGTCGTCAGAGTCCAGGGTTTTGAAGAGGGTGAGAGAAGAATTCGGGGTTAAGGAAAGTGGGTATGTTTGTTTAGGAGGGTTTAAGAATATAAGAGGGGTTTATGAATGGAAAGGCTTGGAATTGGAGGTGGATGAGACACTTTTCGATTTTGGGACTTTGTATGAGATTGAATGTGAGAGTTCCGAGCCCGAGAAAGCTAAGGAGATGATTGAAGAGCTCTTGAAGGATAATGGGATCCCTTATTCTTGTTCTAAGATGTCAAAATTTGCGATTTTCCGAGCCCGGGAGCTCCCATTGCTCTGATCCAAGTAAAATACAGAATCTACATGGTGGCTTTTCATTGAAAAACGATCCATCCTAAGCATAGAAACTTGAGCATCAGCAGAAGGATGCAGCATCAGCATTTAGCAGGCTGACATATTTTCTGTATTTTGTCTTTTTGCCGTTTTATTTCTGTCGTAAATGATGATTAGCAATCATTAGCTGGCACAAACTCTTAGGTTAAACGAGTGTGCCTATTTATTGTAATGGCTTTGAGAATAAAAAGCATATTTTTCTCTCAAATATTATTGCAGTATATTTAACTTCCTCACATATGTGATATGTGAAGTCTAAACTCTAAACTCTAAACTCTAAACTCTAAACTCCTTGTGTTTGTCTGAGTAATAGTAAGGACTAAGGAGTCGTGAACTTGTCTCAAATATTAGTGCGATGGATTTCCCAGATTCAAAACTTGAAATATTTAACTTCCTGCTCTGTAAGTTTACTGTTTACACCAAG ATGGAAGTGGAAGTCAAGCTAAGGCTCCCCGATTCCGCCGCTCACCAGTCTCTCTCAACCGTCCTATCGCCGTTCCTCCGCCGAACCCACTTCCAGCACAATGTCTTCTTCGACGGGGCTGCCTCCGAGCTCTCCTCCCGTCGCGCTGTTCTCCGTTTACGTTTCTACGGCGAAGATCCTGAGACAGCAGAACGCTGCGTTTCGAGCCTAAAAGCTAAAGCTGTCCTTGTCAATGGGGTTAGCAGAGTTGAGGAAGATGAGGAAGAGATTGACCCCTTTTTAGGACGGGAGATTTGCGCCAACCCGAATCTAATTGGGTCGTCAGAGTCCAGGGTTTTGAAGAGGGTGAGAGAAGAATTCGGGGTTAAGGAAAGTGGGTATGTTTGTTTAGGAGGGTTTAAGAATATAAGAGGGGTTTATGAATGGAAAGGCTTGGAATTGGAGGTGGATGAGACACTTTTCGATTTTGGGACTTTGTATGAGATTGAATGTGAGAGTTCCGAGCCCGAGAAAGCTAAGGAGATGATTGAAGAGCTCTTGAAGGATAATGGGATCCCTTATTCTTGTTCTAAGATGTCAAAATTTGCGATTTTCCGAGCCCGGGAGCTCCCATTGCTCTGA MEVEVKLRLPDSAAHQSLSTVLSPFLRRTHFQHNVFFDGAASELSSRRAVLRLRFYGEDPETAERCVSSLKAKAVLVNGVSRVEEDEEEIDPFLGREICANPNLIGSSESRVLKRVREEFGVKESGYVCLGGFKNIRGVYEWKGLELEVDETLFDFGTLYEIECESSEPEKAKEMIEELLKDNGIPYSCSKMSKFAIFRARELPLL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo19149.1 vs. NCBI nr
Match: gi|902221251|gb|KNA18850.1| (hypothetical protein SOVF_066970 [Spinacia oleracea]) HSP 1 Score: 412.5 bits (1059), Expect = 4.200e-112 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1
BLAST of Spo19149.1 vs. NCBI nr
Match: gi|731353069|ref|XP_010687867.1| (PREDICTED: triphosphate tunel metalloenzyme 3 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 354.4 bits (908), Expect = 1.400e-94 Identity = 175/206 (84.95%), Postives = 194/206 (94.17%), Query Frame = 1
BLAST of Spo19149.1 vs. NCBI nr
Match: gi|225446199|ref|XP_002263004.1| (PREDICTED: triphosphate tunel metalloenzyme 3 isoform X3 [Vitis vinifera]) HSP 1 Score: 279.3 bits (713), Expect = 5.600e-72 Identity = 135/204 (66.18%), Postives = 170/204 (83.33%), Query Frame = 1
BLAST of Spo19149.1 vs. NCBI nr
Match: gi|731407510|ref|XP_010656522.1| (PREDICTED: triphosphate tunel metalloenzyme 3 isoform X1 [Vitis vinifera]) HSP 1 Score: 279.3 bits (713), Expect = 5.600e-72 Identity = 135/204 (66.18%), Postives = 170/204 (83.33%), Query Frame = 1
BLAST of Spo19149.1 vs. NCBI nr
Match: gi|356562926|ref|XP_003549719.1| (PREDICTED: triphosphate tunel metalloenzyme 3 [Glycine max]) HSP 1 Score: 277.3 bits (708), Expect = 2.100e-71 Identity = 143/204 (70.10%), Postives = 169/204 (82.84%), Query Frame = 1
BLAST of Spo19149.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RH94_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_066970 PE=4 SV=1) HSP 1 Score: 412.5 bits (1059), Expect = 3.000e-112 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1
BLAST of Spo19149.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BS75_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g193350 PE=4 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 9.500e-95 Identity = 175/206 (84.95%), Postives = 194/206 (94.17%), Query Frame = 1
BLAST of Spo19149.1 vs. UniProtKB/TrEMBL
Match: F6HCH5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00440 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 3.900e-72 Identity = 135/204 (66.18%), Postives = 170/204 (83.33%), Query Frame = 1
BLAST of Spo19149.1 vs. UniProtKB/TrEMBL
Match: I1MU21_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G107700 PE=4 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 1.500e-71 Identity = 143/204 (70.10%), Postives = 169/204 (82.84%), Query Frame = 1
BLAST of Spo19149.1 vs. UniProtKB/TrEMBL
Match: G7JGL5_MEDTR (Adenylate cyclase OS=Medicago truncatula GN=MTR_4g116130 PE=4 SV=1) HSP 1 Score: 275.4 bits (703), Expect = 5.600e-71 Identity = 139/205 (67.80%), Postives = 170/205 (82.93%), Query Frame = 1
BLAST of Spo19149.1 vs. ExPASy Swiss-Prot
Match: TTM3_ARATH (Triphosphate tunel metalloenzyme 3 OS=Arabidopsis thaliana GN=TTM3 PE=1 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 3.500e-58 Identity = 116/210 (55.24%), Postives = 151/210 (71.90%), Query Frame = 1
BLAST of Spo19149.1 vs. TAIR (Arabidopsis)
Match: AT2G11890.1 (adenylate cyclases) HSP 1 Score: 226.1 bits (575), Expect = 2.000e-59 Identity = 116/210 (55.24%), Postives = 151/210 (71.90%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo19149.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo19149.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo19149.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo19149.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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