Spo19171 (gene)

Overview
NameSpo19171
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionCalcium-binding EF-hand family protein
LocationSpoScf_01029 : 49568 .. 51197 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGATGAAACAAATGAAGTCAGGTCCCGAGGCAGATTCGCAGCAAATATGCAAAGATCTGAAGAAAACACCAAATGGAATCATCGGAATTCTTAAGAAGTATGGAGAACGTTTGAGCGAATAAAGTTCGAAATGAGGAAAGAAGTGCGGTATTTATAGGCCACGTTCTGAAAATCGCCCAACTTCCGCCCCTTAACACTTGTCATCCGTTCGCGAATTCAAACCACTCTCTTTTCGAAAAAAGAGAGGGAATCTTTGGACTTCTTACAGCTGGAAACCCACCCATTTAATTCCAAATGGACTGGGTCTGGGGGGCATGTTGTTTGGGCTCCCAATTGAATATCAATTGGGCCACTAAGTCCAAAGCACAATGGCTCAATTCAAAAACATCGAACCTGCCACCACCACTAAGGCTATTCAGCCATCAACCAAGGCCCAAGGCCCAATATCAATAAATGACCTATGGGCATTTATTATGCAAACACTATAAATAGGCCGCCAAGGCTCAAACCTCAAGGTACGTCCAATTTATTGCCTTAAGACTACTCTCTAGAGAACTTCTCTCTCTAGAATCCAAGCATTGTTCTTACTTAGGCATCGAAAGGGCTTTCTTCGGAAACACCCCCGAGGCTAGTGACATTGTCTTTGTGTAGGTAAATTCGGACAACAATCATTCAAACTAACAAGATCTTCAACACACTCAACAGGGCCTTCATTCGAAGCCCATTGTTCCATCCGCTTCAACACCGGAACAAAAATGAAAAAGGAAACTATCTCAAAATATCGGATAATGAAATATCAATCTCCCTCCGTGGTTCCGTCCAATATACGGAGTAATTCAAAACTTAAATACTCCGTAAGAACAAATTTGTAAATCGTCAAATCTATGTGAACTTGTGAAGTTTCCTTTATAAAATTCCTTAACGTTTTTATTTTGTAAAGTTTCTTAGTAAATGACAAAAATAACCCTGAATTTCCTTCCTCGAAAGCCAGTGGCAGTTACAGAAACTTGGCCGACCTGTTAAACAAATACAGAGTAGTACACGGTACACGCCTCTGTCTCTTTCTCCGCAACTCCCCTCCTCTTTTCCTCCCTNAGTACACGGTACACGCCTCTGTCTCTTTCTCCGCAACTCCCCTCCTCTTTTCCTCCCTTCTCCCCCGCCCCATTATTTATCCCTCTTTCTATCTCCAAACAATCTCAATTCCAACAATCTAAACTCCAACAATAATTTCTCTAAACAAAAAGATCTCAAGAATCCTGTGTTGCGTTGAAAATGGCGTCCTCTAAAAACCAGCAGCAACAGATATTCCAAGATCAACTTCCAATAATGGCGGAGAAGCTCGGCGGAGACGGCTTAATCGGAGAATTATGCAAAGGGTTTCGCTTACTAATGGACGGTGATAAAGGGGTTATTACATTTGATAGTTTAAAGAAGAATGCAGCAATTCTTGGGTTGCAGGATATGACGGATGATGATTTACGAAGTATGTTAAGAGAAGGCGACTGCGATGGCGATGGAGTTCTTAGTGAGATGGAGTTTTGTGTTTTGATGTTTAGATTGAGTCCTGAGTTGATGGAGGAAGCTGAATTTTTGCTTCATCAAGAACTTCAATCCTGTTTCTGA

mRNA sequence

ATGCCGATGAAACAAATGAAGTCAGGTCCCGAGGCAGATTCGCAGCAAATATGCAAAGATCTGAAGAAAACACCAAATGGAATCATCGGAATTCTTAAGAAATCTCAAGAATCCTGTGTTGCGTTGAAAATGGCGTCCTCTAAAAACCAGCAGCAACAGATATTCCAAGATCAACTTCCAATAATGGCGGAGAAGCTCGGCGGAGACGGCTTAATCGGAGAATTATGCAAAGGGTTTCGCTTACTAATGGACGGTGATAAAGGGGTTATTACATTTGATAGTTTAAAGAAGAATGCAGCAATTCTTGGGTTGCAGGATATGACGGATGATGATTTACGAAGTATGTTAAGAGAAGGCGACTGCGATGGCGATGGAGTTCTTAGTGAGATGGAGTTTTGTGTTTTGATGTTTAGATTGAGTCCTGAGTTGATGGAGGAAGCTGAATTTTTGCTTCATCAAGAACTTCAATCCTGTTTCTGA

Coding sequence (CDS)

ATGCCGATGAAACAAATGAAGTCAGGTCCCGAGGCAGATTCGCAGCAAATATGCAAAGATCTGAAGAAAACACCAAATGGAATCATCGGAATTCTTAAGAAATCTCAAGAATCCTGTGTTGCGTTGAAAATGGCGTCCTCTAAAAACCAGCAGCAACAGATATTCCAAGATCAACTTCCAATAATGGCGGAGAAGCTCGGCGGAGACGGCTTAATCGGAGAATTATGCAAAGGGTTTCGCTTACTAATGGACGGTGATAAAGGGGTTATTACATTTGATAGTTTAAAGAAGAATGCAGCAATTCTTGGGTTGCAGGATATGACGGATGATGATTTACGAAGTATGTTAAGAGAAGGCGACTGCGATGGCGATGGAGTTCTTAGTGAGATGGAGTTTTGTGTTTTGATGTTTAGATTGAGTCCTGAGTTGATGGAGGAAGCTGAATTTTTGCTTCATCAAGAACTTCAATCCTGTTTCTGA

Protein sequence

MPMKQMKSGPEADSQQICKDLKKTPNGIIGILKKSQESCVALKMASSKNQQQQIFQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAAILGLQDMTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLSPELMEEAEFLLHQELQSCF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo19171.1Spo19171.1mRNA


Homology
[Close]
BLAST of Spo19171.1 vs. NCBI nr
Match: gi|902190689|gb|KNA11677.1| (hypothetical protein SOVF_132970 [Spinacia oleracea])

HSP 1 Score: 233.0 bits (593), Expect = 3.500e-58
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1 

		  

Query: 44  MASSKNQQQQIFQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAAILG 103
           MASSKNQQQQIFQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAAILG
Sbjct: 1   MASSKNQQQQIFQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAAILG 60

Query: 104 LQDMTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLSPELMEEAEFLLHQELQSCF 160
           LQDMTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLSPELMEEAEFLLHQELQSCF
Sbjct: 61  LQDMTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLSPELMEEAEFLLHQELQSCF 116
[Close]
BLAST of Spo19171.1 vs. NCBI nr
Match: gi|731365040|ref|XP_010694307.1| (PREDICTED: calcium-binding protein PBP1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 186.8 bits (473), Expect = 2.900e-44
Identity = 93/110 (84.55%), Postives = 102/110 (92.73%), Query Frame = 1 

		  

Query: 47  SKNQQQQIFQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAAILGLQD 106
           SKN  Q  FQDQLP+MA+KLGG+ LIGELCKGFRLL+D DKGVITFDSLKKNAAILGLQD
Sbjct: 3   SKNYPQN-FQDQLPLMAQKLGGEALIGELCKGFRLLVDNDKGVITFDSLKKNAAILGLQD 62

Query: 107 MTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLSPELMEEAEFLLHQELQ 157
           ++D+DLR+ML+EGDCDGDG LSEMEFCVLMFRLSPELMEEAEFLL QELQ
Sbjct: 63  LSDEDLRNMLKEGDCDGDGALSEMEFCVLMFRLSPELMEEAEFLLQQELQ 111
[Close]
BLAST of Spo19171.1 vs. NCBI nr
Match: gi|566154292|ref|XP_006370401.1| (hypothetical protein POPTR_0001s42270g [Populus trichocarpa])

HSP 1 Score: 174.9 bits (442), Expect = 1.100e-40
Identity = 87/113 (76.99%), Postives = 100/113 (88.50%), Query Frame = 1 

		  

Query: 43  KMASSKNQQQQIFQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAAIL 102
           KMASS+NQ    FQD LP+MA KLGGDGLIGELC GF LLMDG+KGVITFDSLKKN+A+L
Sbjct: 91  KMASSQNQNSN-FQDFLPLMASKLGGDGLIGELCNGFNLLMDGEKGVITFDSLKKNSALL 150

Query: 103 GLQDMTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLSPELMEEAEFLLHQEL 156
           GLQD++DDDLRSML+EGD DGD  L++MEFCVLMFRLSPELMEE++FLL + L
Sbjct: 151 GLQDLSDDDLRSMLKEGDFDGDEALNQMEFCVLMFRLSPELMEESQFLLEEAL 202
[Close]
BLAST of Spo19171.1 vs. NCBI nr
Match: gi|118484952|gb|ABK94341.1| (unknown [Populus trichocarpa])

HSP 1 Score: 172.9 bits (437), Expect = 4.400e-40
Identity = 86/112 (76.79%), Postives = 99/112 (88.39%), Query Frame = 1 

		  

Query: 44  MASSKNQQQQIFQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAAILG 103
           MASS+NQ    FQD LP+MA KLGGDGLIGELC GF LLMDG+KGVITFDSLKKN+A+LG
Sbjct: 1   MASSQNQNSN-FQDFLPLMASKLGGDGLIGELCNGFNLLMDGEKGVITFDSLKKNSALLG 60

Query: 104 LQDMTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLSPELMEEAEFLLHQEL 156
           LQD++DDDLRSML+EGD DGD  L++MEFCVLMFRLSPELMEE++FLL + L
Sbjct: 61  LQDLSDDDLRSMLKEGDFDGDEALNQMEFCVLMFRLSPELMEESQFLLEEAL 111
[Close]
BLAST of Spo19171.1 vs. NCBI nr
Match: gi|743916978|ref|XP_011002472.1| (PREDICTED: calcium-binding protein PBP1-like [Populus euphratica])

HSP 1 Score: 171.8 bits (434), Expect = 9.700e-40
Identity = 85/112 (75.89%), Postives = 99/112 (88.39%), Query Frame = 1 

		  

Query: 44  MASSKNQQQQIFQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAAILG 103
           MAS++NQ    FQD LP+MA KLGGDGLIGELC GF LLMDG+KGVITFDSLKKN+A+LG
Sbjct: 1   MASTQNQNSN-FQDFLPLMANKLGGDGLIGELCNGFNLLMDGEKGVITFDSLKKNSALLG 60

Query: 104 LQDMTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLSPELMEEAEFLLHQEL 156
           LQD++DDDLRSML+EGD DGD  L++MEFCVLMFRLSPELMEE++FLL + L
Sbjct: 61  LQDLSDDDLRSMLKEGDFDGDEALNQMEFCVLMFRLSPELMEESQFLLEEAL 111
[Close]
BLAST of Spo19171.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QWN3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_132970 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.500e-58
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1 

		  

Query: 44  MASSKNQQQQIFQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAAILG 103
           MASSKNQQQQIFQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAAILG
Sbjct: 1   MASSKNQQQQIFQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAAILG 60

Query: 104 LQDMTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLSPELMEEAEFLLHQELQSCF 160
           LQDMTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLSPELMEEAEFLLHQELQSCF
Sbjct: 61  LQDMTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLSPELMEEAEFLLHQELQSCF 116
[Close]
BLAST of Spo19171.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BB30_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g092610 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.000e-44
Identity = 93/110 (84.55%), Postives = 102/110 (92.73%), Query Frame = 1 

		  

Query: 47  SKNQQQQIFQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAAILGLQD 106
           SKN  Q  FQDQLP+MA+KLGG+ LIGELCKGFRLL+D DKGVITFDSLKKNAAILGLQD
Sbjct: 3   SKNYPQN-FQDQLPLMAQKLGGEALIGELCKGFRLLVDNDKGVITFDSLKKNAAILGLQD 62

Query: 107 MTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLSPELMEEAEFLLHQELQ 157
           ++D+DLR+ML+EGDCDGDG LSEMEFCVLMFRLSPELMEEAEFLL QELQ
Sbjct: 63  LSDEDLRNMLKEGDCDGDGALSEMEFCVLMFRLSPELMEEAEFLLQQELQ 111
[Close]
BLAST of Spo19171.1 vs. UniProtKB/TrEMBL
Match: U5GTT3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s42270g PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 8.000e-41
Identity = 87/113 (76.99%), Postives = 100/113 (88.50%), Query Frame = 1 

		  

Query: 43  KMASSKNQQQQIFQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAAIL 102
           KMASS+NQ    FQD LP+MA KLGGDGLIGELC GF LLMDG+KGVITFDSLKKN+A+L
Sbjct: 91  KMASSQNQNSN-FQDFLPLMASKLGGDGLIGELCNGFNLLMDGEKGVITFDSLKKNSALL 150

Query: 103 GLQDMTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLSPELMEEAEFLLHQEL 156
           GLQD++DDDLRSML+EGD DGD  L++MEFCVLMFRLSPELMEE++FLL + L
Sbjct: 151 GLQDLSDDDLRSMLKEGDFDGDEALNQMEFCVLMFRLSPELMEESQFLLEEAL 202
[Close]
BLAST of Spo19171.1 vs. UniProtKB/TrEMBL
Match: A9PD88_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.000e-40
Identity = 86/112 (76.79%), Postives = 99/112 (88.39%), Query Frame = 1 

		  

Query: 44  MASSKNQQQQIFQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAAILG 103
           MASS+NQ    FQD LP+MA KLGGDGLIGELC GF LLMDG+KGVITFDSLKKN+A+LG
Sbjct: 1   MASSQNQNSN-FQDFLPLMASKLGGDGLIGELCNGFNLLMDGEKGVITFDSLKKNSALLG 60

Query: 104 LQDMTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLSPELMEEAEFLLHQEL 156
           LQD++DDDLRSML+EGD DGD  L++MEFCVLMFRLSPELMEE++FLL + L
Sbjct: 61  LQDLSDDDLRSMLKEGDFDGDEALNQMEFCVLMFRLSPELMEESQFLLEEAL 111
[Close]
BLAST of Spo19171.1 vs. UniProtKB/TrEMBL
Match: B9I051_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s13280g PE=4 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 5.700e-39
Identity = 83/113 (73.45%), Postives = 97/113 (85.84%), Query Frame = 1 

		  

Query: 43  KMASSKNQQQQIFQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAAIL 102
           KMASS N     F+D LP+MA KLGGDGL+GELC GF LL+D +KGVITFDSLKKN+A+L
Sbjct: 56  KMASSSN-----FEDFLPLMANKLGGDGLVGELCNGFNLLVDSEKGVITFDSLKKNSALL 115

Query: 103 GLQDMTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLSPELMEEAEFLLHQEL 156
           GLQD++DDDLR MLREGD DGDG L++MEFCVLMFRLSPELMEE++FLL + L
Sbjct: 116 GLQDLSDDDLRCMLREGDFDGDGALNQMEFCVLMFRLSPELMEESQFLLEEAL 163
[Close]
BLAST of Spo19171.1 vs. ExPASy Swiss-Prot
Match: PBP1_ARATH (Calcium-binding protein PBP1 OS=Arabidopsis thaliana GN=PBP1 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 9.700e-32
Identity = 70/115 (60.87%), Postives = 91/115 (79.13%), Query Frame = 1 

		  

Query: 46  SSKNQQQQIFQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAA-ILGL 105
           + +NQ+ Q FQD  P MA KLGG+GLI E+CKGF LLMD DKGVITF+SL++NA+ +LGL
Sbjct: 11  NQENQEPQ-FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGL 70

Query: 106 QDMTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLSPELMEEAEFLLHQELQSCF 160
            D+TDDD+R M+ EGD D DG L++MEFCVLMFRLSPELME +  ++ + ++  F
Sbjct: 71  GDLTDDDVRYMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124
[Close]
BLAST of Spo19171.1 vs. ExPASy Swiss-Prot
Match: KIC_ARATH (Calcium-binding protein KIC OS=Arabidopsis thaliana GN=KIC PE=1 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 3.000e-25
Identity = 54/110 (49.09%), Postives = 81/110 (73.64%), Query Frame = 1 

		  

Query: 46  SSKNQQQQIFQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAAILGLQ 105
           +S  + +  ++D LP+MAEK+  +  + ELCKGF LL D ++ +IT +SL++N+ ILG++
Sbjct: 13  TSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIE 72

Query: 106 DMTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLSPELMEEAEFLLHQEL 156
            M+ +D + M+REGD DGDG L++ EFCVLM RLSPE+ME+AE  L + L
Sbjct: 73  GMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKAL 122
[Close]
BLAST of Spo19171.1 vs. ExPASy Swiss-Prot
Match: CETN2_HUMAN (Centrin-2 OS=Homo sapiens GN=CETN2 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.200e-9
Identity = 37/112 (33.04%), Postives = 61/112 (54.46%), Query Frame = 1 

		  

Query: 29  IGILKKSQESCVALKMASSKNQQQQIFQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKG 88
           +G   K +E    +     +   +  F D L +M +K+       E+ K F+L  D + G
Sbjct: 60  LGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETG 119

Query: 89  VITFDSLKKNAAILGLQDMTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLS 141
            I+F +LK+ A  LG +++TD++L+ M+ E D DGDG +SE EF  +M + S
Sbjct: 120 KISFKNLKRVAKELG-ENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTS 170
[Close]
BLAST of Spo19171.1 vs. ExPASy Swiss-Prot
Match: CATR_TETST (Caltractin (Fragment) OS=Tetraselmis striata PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.800e-9
Identity = 35/86 (40.70%), Postives = 54/86 (62.79%), Query Frame = 1 

		  

Query: 55  FQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAAILGLQDMTDDDLRS 114
           F++ L +M  K+G      E+ K FRL  D + G I+F +LK+ A  LG ++MTD++L+ 
Sbjct: 62  FEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELG-ENMTDEELQE 121

Query: 115 MLREGDCDGDGVLSEMEFCVLMFRLS 141
           M+ E D DGDG ++E EF  +M + S
Sbjct: 122 MIDEADRDGDGEVNEEEFFRIMKKTS 146
[Close]
BLAST of Spo19171.1 vs. ExPASy Swiss-Prot
Match: CETN1_HUMAN (Centrin-1 OS=Homo sapiens GN=CETN1 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.800e-9
Identity = 34/86 (39.53%), Postives = 53/86 (61.63%), Query Frame = 1 

		  

Query: 55  FQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAAILGLQDMTDDDLRS 114
           F D L +M +K+       E+ K FRL  D + G I+F +LK+ A  LG +++TD++L+ 
Sbjct: 86  FNDFLAVMTQKMSEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELG-ENLTDEELQE 145

Query: 115 MLREGDCDGDGVLSEMEFCVLMFRLS 141
           M+ E D DGDG ++E EF  +M + S
Sbjct: 146 MIDEADRDGDGEVNEEEFLRIMKKTS 170
[Close]
BLAST of Spo19171.1 vs. TAIR (Arabidopsis)
Match: AT5G54490.1 (pinoid-binding protein 1)

HSP 1 Score: 137.9 bits (346), Expect = 5.500e-33
Identity = 70/115 (60.87%), Postives = 91/115 (79.13%), Query Frame = 1 

		  

Query: 46  SSKNQQQQIFQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAA-ILGL 105
           + +NQ+ Q FQD  P MA KLGG+GLI E+CKGF LLMD DKGVITF+SL++NA+ +LGL
Sbjct: 11  NQENQEPQ-FQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGL 70

Query: 106 QDMTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLSPELMEEAEFLLHQELQSCF 160
            D+TDDD+R M+ EGD D DG L++MEFCVLMFRLSPELME +  ++ + ++  F
Sbjct: 71  GDLTDDDVRYMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124
[Close]
BLAST of Spo19171.1 vs. TAIR (Arabidopsis)
Match: AT4G27280.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 134.4 bits (337), Expect = 6.100e-32
Identity = 67/114 (58.77%), Postives = 88/114 (77.19%), Query Frame = 1 

		  

Query: 47  SKNQQQQIFQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAA-ILGLQ 106
           ++   Q  F D LP MA  LGG+GLIGELC GF LLMD +KGVITF+SL++NAA +LGL 
Sbjct: 11  TQQNPQPNFHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLG 70

Query: 107 DMTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLSPELMEEAEFLLHQELQSCF 160
           D+TD+D+R M++EGD D DG L++MEFCVLMFRLSP+LME +  L+ + ++  F
Sbjct: 71  DLTDEDVRCMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124
[Close]
BLAST of Spo19171.1 vs. TAIR (Arabidopsis)
Match: AT2G46600.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 116.3 bits (290), Expect = 1.700e-26
Identity = 54/110 (49.09%), Postives = 81/110 (73.64%), Query Frame = 1 

		  

Query: 46  SSKNQQQQIFQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAAILGLQ 105
           +S  + +  ++D LP+MAEK+  +  + ELCKGF LL D ++ +IT +SL++N+ ILG++
Sbjct: 13  TSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIE 72

Query: 106 DMTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLSPELMEEAEFLLHQEL 156
            M+ +D + M+REGD DGDG L++ EFCVLM RLSPE+ME+AE  L + L
Sbjct: 73  GMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKAL 122
[Close]
BLAST of Spo19171.1 vs. TAIR (Arabidopsis)
Match: AT4G37010.2 (centrin 2)

HSP 1 Score: 48.1 bits (113), Expect = 5.700e-6
Identity = 33/94 (35.11%), Postives = 50/94 (53.19%), Query Frame = 1 

		  

Query: 48  KNQQQQI-FQDQLPIMAEKLGGDGLIGELCKGFRLLMDGDKGVITFDSLKKNAAILGLQD 107
           KNQ   I F + + +M  K G    I EL K F+++   + G I+   +K  A  LG ++
Sbjct: 77  KNQSGAIDFDEFVHMMTTKFGERDSIDELSKAFKIIDHDNNGKISPRDIKMIAKELG-EN 136

Query: 108 MTDDDLRSMLREGDCDGDGVLSEMEFCVLMFRLS 141
            TD+D+  M+ E D D DG ++  EF  +M R S
Sbjct: 137 FTDNDIEEMIEEADRDKDGEVNLEEFMKMMKRTS 169
The following BLAST results are available for this feature:
BLAST of Spo19171.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902190689|gb|KNA11677.1|3.5e-58100.hypothetical protein SOVF_1329... [more]
gi|731365040|ref|XP_010694307.1|2.9e-4484.5PREDICTED: calcium-binding pro... [more]
gi|566154292|ref|XP_006370401.1|1.1e-4076.9hypothetical protein POPTR_000... [more]
gi|118484952|gb|ABK94341.1|4.4e-4076.7unknown [Populus trichocarpa][more]
gi|743916978|ref|XP_011002472.1|9.7e-4075.8PREDICTED: calcium-binding pro... [more]
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BLAST of Spo19171.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QWN3_SPIOL2.5e-58100.Uncharacterized protein OS=Spi... [more]
A0A0J8BB30_BETVU2.0e-4484.5Uncharacterized protein OS=Bet... [more]
U5GTT3_POPTR8.0e-4176.9Uncharacterized protein OS=Pop... [more]
A9PD88_POPTR3.0e-4076.7Putative uncharacterized prote... [more]
B9I051_POPTR5.7e-3973.4Uncharacterized protein OS=Pop... [more]
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BLAST of Spo19171.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PBP1_ARATH9.7e-3260.8Calcium-binding protein PBP1 O... [more]
KIC_ARATH3.0e-2549.0Calcium-binding protein KIC OS... [more]
CETN2_HUMAN5.2e-933.0Centrin-2 OS=Homo sapiens GN=C... [more]
CATR_TETST6.8e-940.7Caltractin (Fragment) OS=Tetra... [more]
CETN1_HUMAN6.8e-939.5Centrin-1 OS=Homo sapiens GN=C... [more]
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BLAST of Spo19171.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT5G54490.15.5e-3360.8pinoid-binding protein 1[more]
AT4G27280.16.1e-3258.7Calcium-binding EF-hand family... [more]
AT2G46600.11.7e-2649.0Calcium-binding EF-hand family... [more]
AT4G37010.25.7e-635.1centrin 2[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 87..138
score: 3.3
IPR002048EF-hand domainSMARTSM00054efh_1coord: 111..139
score: 0.
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 107..142
score: 1
IPR011992EF-hand domain pairGENE3D1.10.238.10coord: 55..139
score: 2.2
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 72..146
score: 8.43
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 120..132
scor
NoneNo IPR availablePANTHERPTHR23050CALCIUM BINDING PROTEINcoord: 55..155
score: 8.6
NoneNo IPR availablePANTHERPTHR23050:SF170SUBFAMILY NOT NAMEDcoord: 55..155
score: 8.6

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0014070 response to organic cyclic compound
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0010224 response to UV-B
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0033554 cellular response to stress
biological_process GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process GO:0006508 proteolysis
biological_process GO:0009693 ethylene biosynthetic process
biological_process GO:0010029 regulation of seed germination
biological_process GO:0048510 regulation of timing of transition from vegetative to reproductive phase
biological_process GO:0005982 starch metabolic process
biological_process GO:0071555 cell wall organization
biological_process GO:0009409 response to cold
biological_process GO:0006073 cellular glucan metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0071310 cellular response to organic substance
biological_process GO:0007186 G-protein coupled receptor signaling pathway
biological_process GO:0045087 innate immune response
biological_process GO:0051179 localization
biological_process GO:0001101 response to acid chemical
biological_process GO:0009743 response to carbohydrate
biological_process GO:0009725 response to hormone
biological_process GO:0009266 response to temperature stimulus
biological_process GO:1901700 response to oxygen-containing compound
biological_process GO:0001666 response to hypoxia
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0080136 priming of cellular response to stress
biological_process GO:0009595 detection of biotic stimulus
biological_process GO:0010229 inflorescence development
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0010120 camalexin biosynthetic process
biological_process GO:0000169 activation of MAPK activity involved in osmosensory signaling pathway
biological_process GO:2000037 regulation of stomatal complex patterning
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0043069 negative regulation of programmed cell death
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0048481 plant ovule development
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0050832 defense response to fungus
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0008152 metabolic process
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0043900 regulation of multi-organism process
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:2000038 regulation of stomatal complex development
biological_process GO:0042742 defense response to bacterium
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0005739 mitochondrion
cellular_component GO:0017177 glucosidase II complex
cellular_component GO:0048046 apoplast
cellular_component GO:0005618 cell wall
cellular_component GO:0005634 nucleus
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0016762 xyloglucan:xyloglucosyl transferase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0004871 obsolete signal transducer activity
molecular_function GO:0043167 ion binding
molecular_function GO:0019001 guanyl nucleotide binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0031683 G-protein beta/gamma-subunit complex binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0004575 sucrose alpha-glucosidase activity
molecular_function GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004707 MAP kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016740 transferase activity
RNA-Seq Expression