Spo19236 (gene) | SpinachBase

Overview


Name	Spo19236
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	60S ribosomal protein L26-1
Location	SpoScf_01790 : 103097 .. 103537 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTACAACCCACGAGTCTCCAGCTCCCGCCGCAAGAGCAGGAAGGCCCATTTCACGGCGCCATCGAGCGTCCGCCGTGTTATCATGAGCGCACCACTCTCCGGCGACCTCAGAAGCAAGTACAACGTCCGTTCAATGCCGGTGCGCAAAGACGACGAAGTCCAGGTGGTTCGTGGTACCTTCAAGGGTCGCGAAGGGAAGGTGGTTCAGGTCTACAGGAAGAAGTGGGTGATTCACATCGAGAGAATCACAAGGGAGAAGGTGAACGGCTCCACCGTCAATGTCGGAATCCACCCCTCGAAGTGCGTCATCACGAAGCTCAGGCTCGACAAGGACCGTAAGTTGCTTTTGGATCGCAAGGCTAAGGGTAAATCTGCTGCTGATAAGGATAAGGGCACCAAGTTCACTGCCGAGGATATTATGCAGACTGTTGATTAG

mRNA sequence

ATGAAGTACAACCCACGAGTCTCCAGCTCCCGCCGCAAGAGCAGGAAGGCCCATTTCACGGCGCCATCGAGCGTCCGCCGTGTTATCATGAGCGCACCACTCTCCGGCGACCTCAGAAGCAAGTACAACGTCCGTTCAATGCCGGTGCGCAAAGACGACGAAGTCCAGGTGGTTCGTGGTACCTTCAAGGGTCGCGAAGGGAAGGTGGTTCAGGTCTACAGGAAGAAGTGGGTGATTCACATCGAGAGAATCACAAGGGAGAAGGTGAACGGCTCCACCGTCAATGTCGGAATCCACCCCTCGAAGTGCGTCATCACGAAGCTCAGGCTCGACAAGGACCGTAAGTTGCTTTTGGATCGCAAGGCTAAGGGTAAATCTGCTGCTGATAAGGATAAGGGCACCAAGTTCACTGCCGAGGATATTATGCAGACTGTTGATTAG

Coding sequence (CDS)

ATGAAGTACAACCCACGAGTCTCCAGCTCCCGCCGCAAGAGCAGGAAGGCCCATTTCACGGCGCCATCGAGCGTCCGCCGTGTTATCATGAGCGCACCACTCTCCGGCGACCTCAGAAGCAAGTACAACGTCCGTTCAATGCCGGTGCGCAAAGACGACGAAGTCCAGGTGGTTCGTGGTACCTTCAAGGGTCGCGAAGGGAAGGTGGTTCAGGTCTACAGGAAGAAGTGGGTGATTCACATCGAGAGAATCACAAGGGAGAAGGTGAACGGCTCCACCGTCAATGTCGGAATCCACCCCTCGAAGTGCGTCATCACGAAGCTCAGGCTCGACAAGGACCGTAAGTTGCTTTTGGATCGCAAGGCTAAGGGTAAATCTGCTGCTGATAAGGATAAGGGCACCAAGTTCACTGCCGAGGATATTATGCAGACTGTTGATTAG

Protein sequence

MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRGTFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDRKAKGKSAADKDKGTKFTAEDIMQTVD

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo19236.1	Spo19236.1	mRNA

Homology

[Close]

BLAST of Spo19236.1 vs. NCBI nr
Match: gi|902224205|gb|KNA19721.1| (hypothetical protein SOVF_059130 [Spinacia oleracea])

HSP 1 Score: 280.8 bits (717), Expect = 1.400e-72
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 1

		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRK LLDR
Sbjct: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKSLLDR 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKGKSAADKDKGTKFTAEDIMQTVD
Sbjct: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 146

[Close]

BLAST of Spo19236.1 vs. NCBI nr
Match: gi|747054914|ref|XP_011073689.1| (PREDICTED: 60S ribosomal protein L26-1 [Sesamum indicum])

HSP 1 Score: 272.3 bits (695), Expect = 4.800e-70
Identity = 139/146 (95.21%), Postives = 144/146 (98.63%), Query Frame = 1

		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSK VITKLRLDKDRK LLDR
Sbjct: 61  TYKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKG++AADKDKGTKFTAEDIMQT+D
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQTID 146

[Close]

BLAST of Spo19236.1 vs. NCBI nr
Match: gi|848855845|ref|XP_012853951.1| (PREDICTED: 60S ribosomal protein L26-1 [Erythranthe guttata])

HSP 1 Score: 269.6 bits (688), Expect = 3.100e-69
Identity = 137/146 (93.84%), Postives = 143/146 (97.95%), Query Frame = 1

		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLSGDLR+KYN RSMPVRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRTKYNARSMPVRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSK VITKLRLDKDRK LLDR
Sbjct: 61  TYKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKG++AADKDKGTKFTAEDIMQT+D
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQTID 146

[Close]

BLAST of Spo19236.1 vs. NCBI nr
Match: gi|697190038|ref|XP_009604077.1| (PREDICTED: 60S ribosomal protein L26-1-like [Nicotiana tomentosiformis])

HSP 1 Score: 268.9 bits (686), Expect = 5.400e-69
Identity = 137/146 (93.84%), Postives = 143/146 (97.95%), Query Frame = 1

		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRVSSSRRK+RKAHFTAPSSVRRV+MSAPLS DLRSKYNVRSMPVRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRVLMSAPLSSDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSK V+TKLRLDKDRK LLDR
Sbjct: 61  TYKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKVVVTKLRLDKDRKSLLDR 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKG++AADKDKGTKFTAEDIMQTVD
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQTVD 146

[Close]

BLAST of Spo19236.1 vs. NCBI nr
Match: gi|698447251|ref|XP_009770504.1| (PREDICTED: 60S ribosomal protein L26-1-like [Nicotiana sylvestris])

HSP 1 Score: 268.9 bits (686), Expect = 5.400e-69
Identity = 137/146 (93.84%), Postives = 143/146 (97.95%), Query Frame = 1

		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLS DLR+KYNVRSMPVRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSSDLRTKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSK V+TKLRLDKDRK LLDR
Sbjct: 61  TYKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKVVVTKLRLDKDRKSLLDR 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKG++AADKDKGTKFTAEDIMQTVD
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQTVD 146

[Close]

BLAST of Spo19236.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJN0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_059130 PE=3 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 9.500e-73
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 1

		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRK LLDR
Sbjct: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKSLLDR 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKGKSAADKDKGTKFTAEDIMQTVD
Sbjct: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 146

[Close]

BLAST of Spo19236.1 vs. UniProtKB/TrEMBL
Match: A0A022RX16_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015764mg PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.200e-69
Identity = 137/146 (93.84%), Postives = 143/146 (97.95%), Query Frame = 1

		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLSGDLR+KYN RSMPVRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRTKYNARSMPVRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSK VITKLRLDKDRK LLDR
Sbjct: 61  TYKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKG++AADKDKGTKFTAEDIMQT+D
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQTID 146

[Close]

BLAST of Spo19236.1 vs. UniProtKB/TrEMBL
Match: W9RS71_9ROSA (60S ribosomal protein L26-1 OS=Morus notabilis GN=L484_009395 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.100e-68
Identity = 137/146 (93.84%), Postives = 144/146 (98.63%), Query Frame = 1

		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGKVVQVYR+KWVIHIERITREKVNGSTVNVGI+PSK VITKLRLDKDRK LLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKG++AADKDKGTKFTAEDIMQ+VD
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 146

[Close]

BLAST of Spo19236.1 vs. UniProtKB/TrEMBL
Match: A0A022QLP7_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015787mg PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 1.900e-68
Identity = 135/146 (92.47%), Postives = 142/146 (97.26%), Query Frame = 1

		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLSGDLR+KYN RSMPVRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRTKYNARSMPVRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSK VITKLRLDKDRK LLDR
Sbjct: 61  TYKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKG++AADK+KGTKFT EDIMQT+D
Sbjct: 121 KAKGRAAADKEKGTKFTTEDIMQTID 146

[Close]

BLAST of Spo19236.1 vs. UniProtKB/TrEMBL
Match: W9RUQ0_9ROSA (60S ribosomal protein L26-1 OS=Morus notabilis GN=L484_009396 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 3.200e-68
Identity = 136/146 (93.15%), Postives = 144/146 (98.63%), Query Frame = 1

		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MK+NPRVSSSRRKSRKAHFTAPSSVRRV+MSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG
Sbjct: 1   MKFNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGKVVQVYR+KWVIHIERITREKVNGSTVNVGI+PSK VITKLRLDKDRK LLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKG++AADKDKGTKFTAEDIMQ+VD
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 146

[Close]

BLAST of Spo19236.1 vs. ExPASy Swiss-Prot
Match: RL261_ARATH (60S ribosomal protein L26-1 OS=Arabidopsis thaliana GN=RPL26A PE=2 SV=2)

HSP 1 Score: 247.3 bits (630), Expect = 1.000e-64
Identity = 124/146 (84.93%), Postives = 138/146 (94.52%), Query Frame = 1

		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRV+SSRRK+RKAHFTA SS RRVIMS+PLS DLR KYNVRSMP+RKDDEVQ+VRG
Sbjct: 1   MKYNPRVTSSRRKNRKAHFTASSSERRVIMSSPLSTDLRQKYNVRSMPIRKDDEVQIVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGKVVQVYR+KWVIHIERITREKVNG+TVNVGI PSK VITKLRLDKDRK LL+R
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGTTVNVGIQPSKVVITKLRLDKDRKSLLER 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKG++AADK+KGTKFT+ED+MQ VD
Sbjct: 121 KAKGRAAADKEKGTKFTSEDVMQNVD 146

[Close]

BLAST of Spo19236.1 vs. ExPASy Swiss-Prot
Match: RL262_ARATH (60S ribosomal protein L26-2 OS=Arabidopsis thaliana GN=RPL26B PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 4.400e-63
Identity = 120/146 (82.19%), Postives = 139/146 (95.21%), Query Frame = 1

		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MK+NPRVSSSRRK+RKAHFTAPSSVRRV+MS+PLS DLR+K+NVRSMP+RKDDEVQVVRG
Sbjct: 1   MKFNPRVSSSRRKNRKAHFTAPSSVRRVLMSSPLSKDLRNKHNVRSMPIRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           TFKGREGKV+QVYR+KWVIHIERITREKVNGSTVNVG++ S  +ITKLRLDKDRK LL+R
Sbjct: 61  TFKGREGKVMQVYRRKWVIHIERITREKVNGSTVNVGVNASNVMITKLRLDKDRKSLLER 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KA G++AADK+KGTKF+AED+M+ VD
Sbjct: 121 KANGRAAADKEKGTKFSAEDVMENVD 146

[Close]

BLAST of Spo19236.1 vs. ExPASy Swiss-Prot
Match: RL26_BRACM (60S ribosomal protein L26 OS=Brassica campestris GN=RPL26 PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 5.000e-59
Identity = 114/145 (78.62%), Postives = 131/145 (90.34%), Query Frame = 1

		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRV+SSRR++RK HFTA SS RRV MS+PLS DLR KYNVRSMP+RKDDE Q+VRG
Sbjct: 1   MKYNPRVTSSRRRNRKPHFTASSSERRVXMSSPLSTDLRQKYNVRSMPIRKDDEXQIVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGK+ QVYR+K VIHIER+TREKVNG+TVNVG+ P+K VITKLRLDKDRK LL+R
Sbjct: 61  TYKGREGKLXQVYRRKXVIHIERLTREKVNGTTVNVGVQPTKVVITKLRLDKDRKSLLER 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTV 146
           KAKG++AADKDKGTKFTA D+MQ V
Sbjct: 121 KAKGRAAADKDKGTKFTAVDVMQNV 145

[Close]

BLAST of Spo19236.1 vs. ExPASy Swiss-Prot
Match: RL26_MOUSE (60S ribosomal protein L26 OS=Mus musculus GN=Rpl26 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.200e-44
Identity = 96/142 (67.61%), Postives = 118/142 (83.10%), Query Frame = 1

		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MK+NP V+S R K+RK HF APS +RR IMS+PLS +LR KYNVRSMP+RKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 61  TFKGRE-GKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLD 120
            +KG++ GKVVQVYRKK+VI+IER+ REK NG+TV+VGIHPSK VIT+L+LDKDRK +L+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 121 RKAKGKSAADKDKGTKFTAEDI 142
           RKAK +    K+KG K+  E I
Sbjct: 121 RKAKSRQVG-KEKG-KYKEETI 140

[Close]

BLAST of Spo19236.1 vs. ExPASy Swiss-Prot
Match: RL26_MACFA (60S ribosomal protein L26 OS=Macaca fascicularis GN=RPL26 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.200e-44
Identity = 96/142 (67.61%), Postives = 118/142 (83.10%), Query Frame = 1

		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MK+NP V+S R K+RK HF APS +RR IMS+PLS +LR KYNVRSMP+RKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 61  TFKGRE-GKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLD 120
            +KG++ GKVVQVYRKK+VI+IER+ REK NG+TV+VGIHPSK VIT+L+LDKDRK +L+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 121 RKAKGKSAADKDKGTKFTAEDI 142
           RKAK +    K+KG K+  E I
Sbjct: 121 RKAKSRQVG-KEKG-KYKEETI 140

[Close]

BLAST of Spo19236.1 vs. TAIR (Arabidopsis)
Match: AT3G49910.1 (Translation protein SH3-like family protein)

HSP 1 Score: 247.3 bits (630), Expect = 5.900e-66
Identity = 124/146 (84.93%), Postives = 138/146 (94.52%), Query Frame = 1

		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MKYNPRV+SSRRK+RKAHFTA SS RRVIMS+PLS DLR KYNVRSMP+RKDDEVQ+VRG
Sbjct: 1   MKYNPRVTSSRRKNRKAHFTASSSERRVIMSSPLSTDLRQKYNVRSMPIRKDDEVQIVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           T+KGREGKVVQVYR+KWVIHIERITREKVNG+TVNVGI PSK VITKLRLDKDRK LL+R
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGTTVNVGIQPSKVVITKLRLDKDRKSLLER 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KAKG++AADK+KGTKFT+ED+MQ VD
Sbjct: 121 KAKGRAAADKEKGTKFTSEDVMQNVD 146

[Close]

BLAST of Spo19236.1 vs. TAIR (Arabidopsis)
Match: AT5G67510.1 (Translation protein SH3-like family protein)

HSP 1 Score: 241.9 bits (616), Expect = 2.500e-64
Identity = 120/146 (82.19%), Postives = 139/146 (95.21%), Query Frame = 1

		  
Query: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVIMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60
           MK+NPRVSSSRRK+RKAHFTAPSSVRRV+MS+PLS DLR+K+NVRSMP+RKDDEVQVVRG
Sbjct: 1   MKFNPRVSSSRRKNRKAHFTAPSSVRRVLMSSPLSKDLRNKHNVRSMPIRKDDEVQVVRG 60

Query: 61  TFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIHPSKCVITKLRLDKDRKLLLDR 120
           TFKGREGKV+QVYR+KWVIHIERITREKVNGSTVNVG++ S  +ITKLRLDKDRK LL+R
Sbjct: 61  TFKGREGKVMQVYRRKWVIHIERITREKVNGSTVNVGVNASNVMITKLRLDKDRKSLLER 120

Query: 121 KAKGKSAADKDKGTKFTAEDIMQTVD 147
           KA G++AADK+KGTKF+AED+M+ VD
Sbjct: 121 KANGRAAADKEKGTKFSAEDVMENVD 146

The following BLAST results are available for this feature:

BLAST of Spo19236.1 vs. NCBI nr
BLAST of Spo19236.1 vs. UniProtKB/TrEMBL
BLAST of Spo19236.1 vs. ExPASy Swiss-Prot
BLAST of Spo19236.1 vs. TAIR (Arabidopsis)

BLAST of Spo19236.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902224205\|gb\|KNA19721.1\|	1.4e-72	99.3	hypothetical protein SOVF_0591...	[more]
gi\|747054914\|ref\|XP_011073689.1\|	4.8e-70	95.2	PREDICTED: 60S ribosomal prote...	[more]
gi\|848855845\|ref\|XP_012853951.1\|	3.1e-69	93.8	PREDICTED: 60S ribosomal prote...	[more]
gi\|697190038\|ref\|XP_009604077.1\|	5.4e-69	93.8	PREDICTED: 60S ribosomal prote...	[more]
gi\|698447251\|ref\|XP_009770504.1\|	5.4e-69	93.8	PREDICTED: 60S ribosomal prote...	[more]

BLAST of Spo19236.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9RJN0_SPIOL	9.5e-73	99.3	Uncharacterized protein OS=Spi...	[more]
A0A022RX16_ERYGU	2.2e-69	93.8	Uncharacterized protein OS=Ery...	[more]
W9RS71_9ROSA	1.1e-68	93.8	60S ribosomal protein L26-1 OS...	[more]
A0A022QLP7_ERYGU	1.9e-68	92.4	Uncharacterized protein OS=Ery...	[more]
W9RUQ0_9ROSA	3.2e-68	93.1	60S ribosomal protein L26-1 OS...	[more]

BLAST of Spo19236.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
RL261_ARATH	1.0e-64	84.9	60S ribosomal protein L26-1 OS...	[more]
RL262_ARATH	4.4e-63	82.1	60S ribosomal protein L26-2 OS...	[more]
RL26_BRACM	5.0e-59	78.6	60S ribosomal protein L26 OS=B...	[more]
RL26_MOUSE	1.2e-44	67.6	60S ribosomal protein L26 OS=M...	[more]
RL26_MACFA	1.2e-44	67.6	60S ribosomal protein L26 OS=M...	[more]

BLAST of Spo19236.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2

Position :

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x 1


Match Name	E-value	Identity	Description
AT3G49910.1	5.9e-66	84.9	Translation protein SH3-like f...	[more]
AT5G67510.1	2.5e-64	82.1	Translation protein SH3-like f...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005756	Ribosomal protein L26/L24P, eukaryotic/archaeal	HAMAP	MF_01326_A	Ribosomal_L24_A	coord: 9..121 score: 20
IPR005756	Ribosomal protein L26/L24P, eukaryotic/archaeal	PANTHER	PTHR11143	60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER	coord: 2..146 score: 7.7E
IPR005756	Ribosomal protein L26/L24P, eukaryotic/archaeal	PFAM	PF16906	Ribosomal_L26	coord: 8..121 score: 1.1
IPR005756	Ribosomal protein L26/L24P, eukaryotic/archaeal	TIGRFAMs	TIGR01080	TIGR01080	coord: 8..122 score: 8.6
IPR005824	KOW	PFAM	PF00467	KOW	coord: 51..82 score: 7.2
IPR005824	KOW	SMART	SM00739	kow_9	coord: 48..75 score: 7.
IPR005825	Ribosomal protein L24/L26, conserved site	PROSITE	PS01108	RIBOSOMAL_L24	coord: 52..69 scor
IPR008991	Translation protein SH3-like domain	unknown	SSF50104	Translation proteins SH3-like domain	coord: 8..125 score: 2.71
IPR014722	Ribosomal protein L2 domain 2	GENE3D	2.30.30.30		coord: 7..125 score: 2.3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:1901575	organic substance catabolic process
biological_process	GO:0009750	response to fructose
biological_process	GO:0019521	D-gluconate metabolic process
biological_process	GO:0051301	cell division
biological_process	GO:0009790	embryo development
biological_process	GO:0008152	metabolic process
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0006457	protein folding
biological_process	GO:0042273	ribosomal large subunit biogenesis
biological_process	GO:0009085	lysine biosynthetic process
biological_process	GO:0006430	lysyl-tRNA aminoacylation
biological_process	GO:0042256	mature ribosome assembly
biological_process	GO:0044248	cellular catabolic process
biological_process	GO:0009987	cellular process
biological_process	GO:0016070	RNA metabolic process
biological_process	GO:0009749	response to glucose
biological_process	GO:0071215	cellular response to abscisic acid stimulus
biological_process	GO:0030001	metal ion transport
biological_process	GO:0006554	lysine catabolic process
biological_process	GO:0006099	tricarboxylic acid cycle
biological_process	GO:0006568	tryptophan metabolic process
biological_process	GO:0045037	protein import into chloroplast stroma
biological_process	GO:0048481	plant ovule development
biological_process	GO:0009409	response to cold
biological_process	GO:0048598	embryonic morphogenesis
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0006013	mannose metabolic process
biological_process	GO:0052546	cell wall pectin metabolic process
biological_process	GO:0019877	diaminopimelate biosynthetic process
biological_process	GO:0009744	response to sucrose
biological_process	GO:0009165	nucleotide biosynthetic process
biological_process	GO:0006364	rRNA processing
biological_process	GO:0006563	L-serine metabolic process
biological_process	GO:0006556	S-adenosylmethionine biosynthetic process
biological_process	GO:0009086	methionine biosynthetic process
biological_process	GO:0006164	purine nucleotide biosynthetic process
biological_process	GO:0009088	threonine biosynthetic process
biological_process	GO:0043086	negative regulation of catalytic activity
biological_process	GO:0048359	mucilage metabolic process involved in seed coat development
biological_process	GO:0080001	mucilage extrusion from seed coat
biological_process	GO:0007049	cell cycle
biological_process	GO:0006974	cellular response to DNA damage stimulus
biological_process	GO:0048478	replication fork protection
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0006396	RNA processing
biological_process	GO:0009863	salicylic acid mediated signaling pathway
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0007020	microtubule nucleation
biological_process	GO:0016246	RNA interference
biological_process	GO:0006884	cell volume homeostasis
biological_process	GO:0006821	chloride transport
biological_process	GO:0000387	spliceosomal snRNP assembly
biological_process	GO:0009611	response to wounding
biological_process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
biological_process	GO:0016571	histone methylation
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0016579	protein deubiquitination
biological_process	GO:0008033	tRNA processing
biological_process	GO:0048571	long-day photoperiodism
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0052541	plant-type cell wall cellulose metabolic process
biological_process	GO:0006414	translational elongation
biological_process	GO:0016570	histone modification
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006972	hyperosmotic response
biological_process	GO:0006108	malate metabolic process
biological_process	GO:0019643	reductive tricarboxylic acid cycle
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0009651	response to salt stress
biological_process	GO:0006833	water transport
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0009684	indoleacetic acid biosynthetic process
biological_process	GO:0006782	protoporphyrinogen IX biosynthetic process
biological_process	GO:0006569	tryptophan catabolic process
biological_process	GO:0048366	leaf development
biological_process	GO:0044262	cellular carbohydrate metabolic process
biological_process	GO:0009648	photoperiodism
biological_process	GO:0000302	response to reactive oxygen species
biological_process	GO:0006007	glucose catabolic process
biological_process	GO:0006310	DNA recombination
biological_process	GO:0032776	DNA methylation on cytosine
biological_process	GO:0015940	pantothenate biosynthetic process
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0006342	chromatin silencing
biological_process	GO:0051258	protein polymerization
biological_process	GO:0007017	microtubule-based process
biological_process	GO:0042545	cell wall modification
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0009809	lignin biosynthetic process
biological_process	GO:0006555	methionine metabolic process
biological_process	GO:0046487	glyoxylate metabolic process
biological_process	GO:0006086	acetyl-CoA biosynthetic process from pyruvate
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0045595	regulation of cell differentiation
biological_process	GO:0006020	inositol metabolic process
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0006000	fructose metabolic process
biological_process	GO:0006412	translation
biological_process	GO:0006531	aspartate metabolic process
biological_process	GO:0006421	asparaginyl-tRNA aminoacylation
biological_process	GO:0015976	carbon utilization
biological_process	GO:0048825	cotyledon development
biological_process	GO:0009880	embryonic pattern specification
biological_process	GO:0019915	lipid storage
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0010072	primary shoot apical meristem specification
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0010564	regulation of cell cycle process
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0050826	response to freezing
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0009845	seed germination
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0007062	sister chromatid cohesion
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0006522	alanine metabolic process
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0030154	cell differentiation
biological_process	GO:0008283	cell proliferation
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0006544	glycine metabolic process
biological_process	GO:0009089	lysine biosynthetic process via diaminopimelate
biological_process	GO:0006275	regulation of DNA replication
biological_process	GO:0009266	response to temperature stimulus
biological_process	GO:0048609	multicellular organismal reproductive process
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0006189	'de novo' IMP biosynthetic process
biological_process	GO:0016126	sterol biosynthetic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006096	glycolytic process
biological_process	GO:0009097	isoleucine biosynthetic process
biological_process	GO:0009098	leucine biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009099	valine biosynthetic process
biological_process	GO:0048767	root hair elongation
biological_process	GO:0000271	polysaccharide biosynthetic process
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0000028	ribosomal small subunit assembly
biological_process	GO:0030163	protein catabolic process
biological_process	GO:0006508	proteolysis
biological_process	GO:0009825	multidimensional cell growth
biological_process	GO:0007018	microtubule-based movement
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0043090	amino acid import
biological_process	GO:0015696	ammonium transport
biological_process	GO:0015802	basic amino acid transport
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0010351	lithium ion transport
biological_process	GO:0061025	membrane fusion
biological_process	GO:0071704	organic substance metabolic process
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0006862	nucleotide transport
biological_process	GO:0006536	glutamate metabolic process
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0006270	DNA replication initiation
biological_process	GO:0006268	DNA unwinding involved in DNA replication
biological_process	GO:0050687	negative regulation of defense response to virus
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0006949	syncytium formation
biological_process	GO:0007267	cell-cell signaling
biological_process	GO:0019722	calcium-mediated signaling
biological_process	GO:0010389	regulation of G2/M transition of mitotic cell cycle
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006306	DNA methylation
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0051567	histone H3-K9 methylation
biological_process	GO:0006526	arginine biosynthetic process
biological_process	GO:0050794	regulation of cellular process
biological_process	GO:0006783	heme biosynthetic process
biological_process	GO:0009116	nucleoside metabolic process
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0009263	deoxyribonucleotide biosynthetic process
biological_process	GO:0009202	deoxyribonucleoside triphosphate biosynthetic process
biological_process	GO:0009186	deoxyribonucleoside diphosphate metabolic process
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006448	regulation of translational elongation
biological_process	GO:0010033	response to organic substance
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0043069	negative regulation of programmed cell death
biological_process	GO:0006869	lipid transport
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0051604	protein maturation
biological_process	GO:0006626	protein targeting to mitochondrion
biological_process	GO:0016558	protein import into peroxisome matrix
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0006952	defense response
biological_process	GO:0008356	asymmetric cell division
biological_process	GO:0009926	auxin polar transport
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0007389	pattern specification process
biological_process	GO:0008361	regulation of cell size
biological_process	GO:0010075	regulation of meristem growth
biological_process	GO:0010015	root morphogenesis
biological_process	GO:0006241	CTP biosynthetic process
biological_process	GO:0000466	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006183	GTP biosynthetic process
biological_process	GO:0006165	nucleoside diphosphate phosphorylation
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0009585	red, far-red light phototransduction
biological_process	GO:0006228	UTP biosynthetic process
biological_process	GO:0006950	response to stress
biological_process	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process	GO:0043481	anthocyanin accumulation in tissues in response to UV light
biological_process	GO:0048440	carpel development
biological_process	GO:0031365	N-terminal protein amino acid modification
biological_process	GO:0070084	protein initiator methionine removal
biological_process	GO:0016485	protein processing
biological_process	GO:0010048	vernalization response
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006730	one-carbon metabolic process
biological_process	GO:0000478	endonucleolytic cleavage involved in rRNA processing
biological_process	GO:0001731	formation of translation preinitiation complex
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0043269	regulation of ion transport
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0071555	cell wall organization
biological_process	GO:0009932	cell tip growth
biological_process	GO:0030036	actin cytoskeleton organization
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0044070	regulation of anion transport
biological_process	GO:0006084	acetyl-CoA metabolic process
biological_process	GO:0044205	'de novo' UMP biosynthetic process
biological_process	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process
biological_process	GO:0016132	brassinosteroid biosynthetic process
biological_process	GO:0009853	photorespiration
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0034755	iron ion transmembrane transport
biological_process	GO:0006880	intracellular sequestering of iron ion
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006354	DNA-templated transcription, elongation
biological_process	GO:0001510	RNA methylation
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005622	intracellular
cellular_component	GO:0030880	RNA polymerase complex
cellular_component	GO:0005845	mRNA cap binding complex
cellular_component	GO:0031359	integral component of chloroplast outer membrane
cellular_component	GO:0042575	DNA polymerase complex
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0031429	box H/ACA snoRNP complex
cellular_component	GO:0000785	chromatin
cellular_component	GO:0046809	replication compartment
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0010006	Toc complex
cellular_component	GO:0000932	P-body
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005951	carbamoyl-phosphate synthase complex
cellular_component	GO:0005741	mitochondrial outer membrane
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0043229	intracellular organelle
cellular_component	GO:0005971	ribonucleoside-diphosphate reductase complex
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0005853	eukaryotic translation elongation factor 1 complex
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0030687	preribosome, large subunit precursor
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0005874	microtubule
cellular_component	GO:0005635	nuclear envelope
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016020	membrane
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0034715	pICln-Sm protein complex
cellular_component	GO:0034709	methylosome
cellular_component	GO:0009505	plant-type cell wall
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0045252	oxoglutarate dehydrogenase complex
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0045254	pyruvate dehydrogenase complex
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0000502	proteasome complex
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0005829	cytosol
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0030117	membrane coat
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005657	replication fork
cellular_component	GO:0016459	myosin complex
cellular_component	GO:0005773	vacuole
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0005618	cell wall
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component	GO:0005840	ribosome
cellular_component	GO:0044424	intracellular part
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0042555	MCM complex
molecular_function	GO:0004642	phosphoribosylformylglycinamidine synthase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005179	hormone activity
molecular_function	GO:0004871	obsolete signal transducer activity
molecular_function	GO:0016817	hydrolase activity, acting on acid anhydrides
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0000340	RNA 7-methylguanosine cap binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003678	DNA helicase activity
molecular_function	GO:0004739	pyruvate dehydrogenase (acetyl-transferring) activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0004088	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0009678	hydrogen-translocating pyrophosphatase activity
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0004749	ribose phosphate diphosphokinase activity
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups
molecular_function	GO:0004427	inorganic diphosphatase activity
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016779	nucleotidyltransferase activity
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003688	DNA replication origin binding
molecular_function	GO:0004478	methionine adenosyltransferase activity
molecular_function	GO:0042973	glucan endo-1,3-beta-D-glucosidase activity
molecular_function	GO:0008565	protein transporter activity
molecular_function	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity
molecular_function	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function	GO:0004591	oxoglutarate dehydrogenase (succinyl-transferring) activity
molecular_function	GO:0030976	thiamine pyrophosphate binding
molecular_function	GO:0004332	fructose-bisphosphate aldolase activity
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
molecular_function	GO:0008422	beta-glucosidase activity
molecular_function	GO:0004816	asparagine-tRNA ligase activity
molecular_function	GO:0008483	transaminase activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0042286	glutamate-1-semialdehyde 2,1-aminomutase activity
molecular_function	GO:0016905	myosin heavy chain kinase activity
molecular_function	GO:0005488	binding
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0042393	histone binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0030060	L-malate dehydrogenase activity
molecular_function	GO:0004853	uroporphyrinogen decarboxylase activity
molecular_function	GO:0030145	manganese ion binding
molecular_function	GO:0004619	phosphoglycerate mutase activity
molecular_function	GO:0016853	isomerase activity
molecular_function	GO:0004455	ketol-acid reductoisomerase activity
molecular_function	GO:0070402	NADPH binding
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0004824	lysine-tRNA ligase activity
molecular_function	GO:0043023	ribosomal large subunit binding
molecular_function	GO:0008536	Ran GTPase binding
molecular_function	GO:0070006	metalloaminopeptidase activity
molecular_function	GO:0004590	orotidine-5'-phosphate decarboxylase activity
molecular_function	GO:0004588	orotate phosphoribosyltransferase activity
molecular_function	GO:0005200	structural constituent of cytoskeleton
molecular_function	GO:0005381	iron ion transmembrane transporter activity
molecular_function	GO:0008308	voltage-gated anion channel activity
molecular_function	GO:0008097	5S rRNA binding
molecular_function	GO:0043021	ribonucleoprotein complex binding
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004550	nucleoside diphosphate kinase activity
molecular_function	GO:0030337	DNA polymerase processivity factor activity
molecular_function	GO:0004073	aspartate-semialdehyde dehydrogenase activity
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0003942	N-acetyl-gamma-glutamyl-phosphate reductase activity
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0050661	NADP binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0030515	snoRNA binding
molecular_function	GO:0008840	4-hydroxy-tetrahydrodipicolinate synthase
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo23220	0.93	Barchart \| Table
Spo17271	0.91	Barchart \| Table
Spo23498	0.90	Barchart \| Table
Spo12191	0.90	Barchart \| Table
Spo05064	0.90	Barchart \| Table
Spo23622	0.89	Barchart \| Table
Spo02397	0.89	Barchart \| Table
Spo03701	0.89	Barchart \| Table
Spo06904	0.88	Barchart \| Table
Spo25306	0.88	Barchart \| Table
Spo05909	0.87	Barchart \| Table
Spo07016	0.87	Barchart \| Table
Spo07017	0.87	Barchart \| Table
Spo08816	0.87	Barchart \| Table
Spo10147	0.87	Barchart \| Table
Spo05244	0.86	Barchart \| Table
Spo21922	0.86	Barchart \| Table
Spo22394	0.85	Barchart \| Table
Spo01999	0.85	Barchart \| Table
Spo13279	0.85	Barchart \| Table
Spo12304	0.85	Barchart \| Table
Spo08691	0.85	Barchart \| Table
Spo12311	0.85	Barchart \| Table
Spo19200	0.85	Barchart \| Table
Spo04667	0.85	Barchart \| Table
Spo20789	0.85	Barchart \| Table
Spo07668	0.85	Barchart \| Table
Spo18094	0.84	Barchart \| Table
Spo12759	0.84	Barchart \| Table
Spo20997	0.84	Barchart \| Table
Spo06318	0.84	Barchart \| Table
Spo25176	0.83	Barchart \| Table
Spo13481	0.83	Barchart \| Table
Spo20647	0.83	Barchart \| Table
Spo20460	0.83	Barchart \| Table
Spo05114	0.83	Barchart \| Table
Spo07145	0.83	Barchart \| Table
Spo23038	0.83	Barchart \| Table
Spo04390	0.83	Barchart \| Table
Spo23193	0.83	Barchart \| Table
Spo17662	0.82	Barchart \| Table
Spo18647	0.82	Barchart \| Table
Spo20519	0.82	Barchart \| Table
Spo19440	0.82	Barchart \| Table
Spo19413	0.82	Barchart \| Table
Spo19970	0.82	Barchart \| Table
Spo13288	0.82	Barchart \| Table
Spo27154	0.82	Barchart \| Table
Spo02928	0.82	Barchart \| Table
Spo02942	0.82	Barchart \| Table
Spo06706	0.81	Barchart \| Table
Spo01092	0.81	Barchart \| Table
Spo12681	0.81	Barchart \| Table
Spo05632	0.81	Barchart \| Table
Spo05783	0.81	Barchart \| Table
Spo22310	0.81	Barchart \| Table
Spo21186	0.81	Barchart \| Table
Spo05589	0.80	Barchart \| Table
Spo12516	0.80	Barchart \| Table
Spo19254	0.80	Barchart \| Table
Spo25635	0.80	Barchart \| Table
Spo02380	0.80	Barchart \| Table
Spo15751	0.80	Barchart \| Table
Spo15132	0.80	Barchart \| Table
Spo14875	0.80	Barchart \| Table
Spo02011	0.79	Barchart \| Table
Spo23001	0.79	Barchart \| Table
Spo06837	0.79	Barchart \| Table
Spo07821	0.79	Barchart \| Table
Spo18719	0.79	Barchart \| Table
Spo11943	0.79	Barchart \| Table
Spo12193	0.78	Barchart \| Table
Spo22505	0.78	Barchart \| Table
Spo20284	0.78	Barchart \| Table
Spo03527	0.78	Barchart \| Table
Spo03802	0.78	Barchart \| Table
Spo16033	0.78	Barchart \| Table
Spo18901	0.78	Barchart \| Table
Spo08082	0.77	Barchart \| Table
Spo04755	0.77	Barchart \| Table
Spo19207	0.77	Barchart \| Table
Spo11679	0.77	Barchart \| Table
Spo13561	0.77	Barchart \| Table
Spo03573	0.77	Barchart \| Table
Spo14404	0.77	Barchart \| Table
Spo24703	0.77	Barchart \| Table
Spo20376	0.77	Barchart \| Table
Spo15583	0.77	Barchart \| Table
Spo12048	0.76	Barchart \| Table
Spo20161	0.76	Barchart \| Table
Spo19873	0.76	Barchart \| Table
Spo14380	0.76	Barchart \| Table
Spo03979	0.76	Barchart \| Table
Spo15939	0.76	Barchart \| Table
Spo25669	0.76	Barchart \| Table
Spo14692	0.76	Barchart \| Table
Spo06840	0.76	Barchart \| Table
Spo17903	0.75	Barchart \| Table
Spo23241	0.75	Barchart \| Table
Spo17653	0.75	Barchart \| Table
Spo10553	0.75	Barchart \| Table
Spo25206	0.75	Barchart \| Table
Spo04381	0.75	Barchart \| Table
Spo10980	0.75	Barchart \| Table
Spo01535	0.75	Barchart \| Table
Spo04893	0.75	Barchart \| Table
Spo11850	0.75	Barchart \| Table
Spo06094	0.75	Barchart \| Table
Spo01056	0.75	Barchart \| Table
Spo00363	0.75	Barchart \| Table
Spo18221	0.75	Barchart \| Table
Spo09208	0.74	Barchart \| Table
Spo08950	0.74	Barchart \| Table
Spo03626	0.74	Barchart \| Table
Spo05275	0.74	Barchart \| Table
Spo10390	0.74	Barchart \| Table
Spo17495	0.74	Barchart \| Table
Spo03200	0.74	Barchart \| Table
Spo24902	0.74	Barchart \| Table
Spo22936	0.74	Barchart \| Table
Spo07423	0.74	Barchart \| Table
Spo07402	0.74	Barchart \| Table
Spo10599	0.74	Barchart \| Table
Spo05694	0.74	Barchart \| Table
Spo06317	0.74	Barchart \| Table
Spo04311	0.73	Barchart \| Table
Spo01061	0.73	Barchart \| Table
Spo02218	0.73	Barchart \| Table
Spo02838	0.73	Barchart \| Table
Spo06863	0.73	Barchart \| Table
Spo08961	0.73	Barchart \| Table
Spo10565	0.73	Barchart \| Table
Spo11026	0.73	Barchart \| Table
Spo15711	0.73	Barchart \| Table
Spo18370	0.73	Barchart \| Table
Spo24001	0.73	Barchart \| Table
Spo24918	0.73	Barchart \| Table
Spo26488	0.73	Barchart \| Table
Spo26884	0.73	Barchart \| Table
Spo27223	0.73	Barchart \| Table
Spo21068	0.72	Barchart \| Table
Spo17898	0.72	Barchart \| Table
Spo14874	0.72	Barchart \| Table
Spo03131	0.72	Barchart \| Table
Spo08503	0.72	Barchart \| Table
Spo06742	0.72	Barchart \| Table
Spo15961	0.72	Barchart \| Table
Spo10597	0.72	Barchart \| Table
Spo22939	0.72	Barchart \| Table
Spo15604	0.72	Barchart \| Table
Spo05461	0.72	Barchart \| Table
Spo24395	0.72	Barchart \| Table
Spo25349	0.72	Barchart \| Table
Spo20141	0.72	Barchart \| Table
Spo11288	0.71	Barchart \| Table
Spo07537	0.71	Barchart \| Table
Spo00525	0.71	Barchart \| Table
Spo19905	0.71	Barchart \| Table
Spo02534	0.71	Barchart \| Table
Spo06136	0.71	Barchart \| Table
Spo18505	0.71	Barchart \| Table
Spo13621	0.70	Barchart \| Table
Spo25954	0.70	Barchart \| Table
Spo22578	0.70	Barchart \| Table
Spo19441	0.70	Barchart \| Table
Spo07054	0.70	Barchart \| Table
Spo12817	0.70	Barchart \| Table
Spo24914	0.70	Barchart \| Table
Spo01086	0.70	Barchart \| Table
Spo23976	0.70	Barchart \| Table
Spo04242	0.70	Barchart \| Table
Spo13452	0.70	Barchart \| Table
Spo08488	0.70	Barchart \| Table
Spo05232	0.70	Barchart \| Table
Spo18774	0.70	Barchart \| Table
Spo00170	0.69	Barchart \| Table
Spo00055	0.69	Barchart \| Table
Spo25680	0.69	Barchart \| Table
Spo04454	0.69	Barchart \| Table
Spo05970	0.69	Barchart \| Table
Spo18532	0.69	Barchart \| Table
Spo17575	0.69	Barchart \| Table
Spo16749	0.69	Barchart \| Table
Spo05660	0.69	Barchart \| Table
Spo25101	0.69	Barchart \| Table
Spo22215	0.69	Barchart \| Table
Spo10516	0.68	Barchart \| Table
Spo13856	0.68	Barchart \| Table
Spo12598	0.68	Barchart \| Table
Spo15093	0.68	Barchart \| Table
Spo15546	0.68	Barchart \| Table
Spo11107	0.68	Barchart \| Table
Spo15641	0.68	Barchart \| Table
Spo16099	0.68	Barchart \| Table
Spo16367	0.68	Barchart \| Table
Spo17017	0.68	Barchart \| Table
Spo09833	0.68	Barchart \| Table
Spo17929	0.68	Barchart \| Table
Spo09563	0.68	Barchart \| Table
Spo18874	0.68	Barchart \| Table
Spo08258	0.68	Barchart \| Table
Spo08172	0.68	Barchart \| Table
Spo07432	0.68	Barchart \| Table
Spo07075	0.68	Barchart \| Table
Spo06501	0.68	Barchart \| Table
Spo06331	0.68	Barchart \| Table
Spo20846	0.68	Barchart \| Table
Spo22401	0.68	Barchart \| Table
Spo23070	0.68	Barchart \| Table
Spo23681	0.68	Barchart \| Table
Spo01398	0.68	Barchart \| Table
Spo25132	0.68	Barchart \| Table
Spo00780	0.67	Barchart \| Table
Spo16460	0.67	Barchart \| Table
Spo09855	0.67	Barchart \| Table
Spo19650	0.67	Barchart \| Table
Spo17109	0.67	Barchart \| Table
Spo14063	0.67	Barchart \| Table
Spo06282	0.67	Barchart \| Table
Spo06202	0.67	Barchart \| Table
Spo09353	0.67	Barchart \| Table
Spo13439	0.67	Barchart \| Table
Spo24775	0.67	Barchart \| Table
Spo10598	0.67	Barchart \| Table
Spo26442	0.67	Barchart \| Table
Spo07800	0.67	Barchart \| Table
Spo05210	0.66	Barchart \| Table
Spo12994	0.66	Barchart \| Table
Spo22520	0.66	Barchart \| Table
Spo22809	0.66	Barchart \| Table
Spo07962	0.66	Barchart \| Table
Spo09711	0.66	Barchart \| Table
Spo23510	0.66	Barchart \| Table
Spo13818	0.66	Barchart \| Table
Spo00082	0.66	Barchart \| Table
Spo10518	0.66	Barchart \| Table
Spo13781	0.66	Barchart \| Table
Spo16598	0.66	Barchart \| Table
Spo27234	0.66	Barchart \| Table
Spo13794	0.66	Barchart \| Table
Spo25266	0.66	Barchart \| Table
Spo00211	0.66	Barchart \| Table
Spo10999	0.66	Barchart \| Table
Spo15743	0.66	Barchart \| Table
Spo25841	0.66	Barchart \| Table
Spo06097	0.66	Barchart \| Table
Spo21764	0.66	Barchart \| Table
Spo00195	0.65	Barchart \| Table
Spo10322	0.65	Barchart \| Table
Spo21655	0.65	Barchart \| Table
Spo11379	0.65	Barchart \| Table
Spo23496	0.65	Barchart \| Table
Spo05721	0.65	Barchart \| Table
Spo17780	0.65	Barchart \| Table
Spo12901	0.65	Barchart \| Table
Spo05804	0.65	Barchart \| Table
Spo12816	0.65	Barchart \| Table
Spo08664	0.65	Barchart \| Table