Spo19276 (gene)

Overview
NameSpo19276
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionMediator of RNA polymerase II transcription subunit 30, putative
Locationchr3 : 27043609 .. 27053048 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGTGTGATTTACAGAGTAACTGAGATCTTCTTCAACCTAATTTCAGTTTTCTGGCGGAAAAACTTTGATACAGTCAGCAAGTTTGCTTGGGAAACGTGAATATTAGATTGAAATCTCGTTTCCCATTCGTTTCCGGGATGAATTCAGTTTCAAACACGTCTCCATTTTTCTGAAACGGTTTCGCGCGTTCCGAAACGCGTTTCCCGGTTTCCGGTAAGTCGTGATTTTTTGGCGTTTCCGTGCTTCGTAGATGATACACCTTAGTTTATGTGCATTTTATTTTAAAAATGTTTACCGTTCATCCAGTTAGGACTTAGGAATAAAAATCCTGGTTCCGTCATTGTGTGTCTACATTGCACTGATATTTTCAGCTTTTAGAAATTGTCAGTTGTTCTTTTAAGTTATATATGTAATTACTAATCGGAATTGTGTCCCTATAATGGACGAGCTTTGCTGGCGGTTCCGTGGTTATGAAGTCATATTTGGAAAACGTTGAATCTACGATTAATTACTTAAAGATTTGCCTAGGGTTCCCATTTCTTTTGCGTTTCCAGGGTCTTCTATCATGTAATAATGACAACTCCTATATGGAAACGGGAAACCCATTCTGATTTCTGATGGATAGGTTGATAATCCTGATATGATGATATCTAATAGTAAGTTGTAATTCTATTGGAAATTAAGTATGTTTATGTTTTGTGGTTTATCTTGTTTTGTTGAGGCTTTGACATACATAAAAGTAGATGACAATGCTTGATATGTCTTGTTGATGGCTCCTATATTCAATGTTCTGGGGTTGGAATTTTATGTTATAGACAGGAAATTACCCTTCAGCTTATAACTTAACAAGAACTTGTAGTTTTTAGCTGCCTTTATTTTCTGAGGTTACATTACAAAAAAGTTTCCAGCTGTCAAGGGCATAACTAAAAGGAAAGTAATAGAGTTAGGGGTCAGTAGGGATTCCTGGCTTTTCAATTCTTTTGTTATCATTTCTTATATCAGCTGGACTTGTAATTTCGCCTCAACTACCCTGGTAGAATCCTTGACACTTCAGTAGGGGTATGGAGTATGGACATTTTAACACTTCAATTTGGGTCAAAATCATGGGAATTGTAACTGGCAAATCAATTTAACCTAGACGTGACTTGTTGTTTTGTTAATTATCATAGTAAATTCTCAATTTTGGAACATTCCACTTTGATTTTCGTTTAAATTCTGTTTGATTTTAACTCACTAATTTATAAACTGACATTGGCCTCGTGAACTAATAGATTATTTCTTTGCTTTAGCTTAGGCAGGAAGTTTGTTTGAACTGGTGTATGTCTCGGTCTTTCTTTAGAAAGGGAGTTTTGCTTTGATTATTGAAATAATTTCTCAATGTTGGTTCTTGAATCCATCAACTTCTTCTTCTGTGCTTTTTGTGTCACTAGTCATATCTCCTTTTTGTTGGGCATCTTTAATTTTAATTTTCTTTTTAGTTTTGTTGTAGTAAATGTGATAGCCTTGGTGGCAAATAAAGGTAAAAATCTCATTTGTGCAGATTGCAGAAAAGTTAAAATTATCAATTTACAGCTTTTATACTAATATAGCCAGGGCCAAACCTTGGGAAGGCCTATCGAGACCATGCCCCTACCACAATTAGTAGAATAGTGTTTCTCAAAAGTACTTTAGGATAAAATCTTAGTGGCGATCCGAAAATACATTTTTTGATTCGAGGTAGTTTAGTGGCTTAGTGCTTGCATAAAGGAACGAAGTCGCTAAAGTGAGTCGATTTATCCTACTATCGAAAACTCGCTTAGAGGTTCCTGGGCATGCTGACGAAGGGTAAAGCTCAAGAAGATGAGTTTTGTACTCGATTAATTTCTCAGTCCCTTGCACCGGCGCCTCAAAAAGACGGTTTGTGGTAGTTTTGCGTTGACTATCGGGCTTTGGACAGAGAAACAATTCCGGACAAGTACTCAATTTCCATAATTGATGAGCTTTTAGATGAGTTACACGACGCCAATTTTTTTTTCCAAACTCGATTTAAAAGCAAGGTATCATCAGATTAGAGTAGTTAGAGTAGTAAAGGCTGCATTTCGCACACACGAGGGGCATTACGAGTTCTTGGTGATGCCATTTGGGTTGTCAAATGCTCCAACAATATTTCAATCCCTCGTGAATGAGGTATTTAAATCTTTCCTTTGTTAATTTGTCTTAGTATTTTTCTATAATATTCTAGTCTATAGCTCTACTCTTGAAGAGCACACGAGTTATCTGGAAAAAAAATTGAGTGCCCTGGTAGCACATGAGCTTTATGAGAATTAAGAAGTGTGAGTTTGGAAAGGGGAGATTGGCATATTTAGGTCACGTAGTGTTCGGAGAGGGAGTTTCAGTTGACATGGAGAAGGTCCGAGCCATGGTTGAGTGGACAATCCCAAATAATTTGAGAGAGTTACGAGGATTTTTGGGTCTTACTTGATACTATAGAAAGTTTGTATCTCGTTATCCTTGCACACCCTTTATCCGATCAGTTGAAGAAAGATGCGTTTGGGTGGTCTGAAAATGCTACTGAGGCTTTTGAGAAGCTGAAACGGGCAATGTGTGGGGCGCCGGTGTTGGCAATGCCCAACTTTAACAAGATATTCGTAGATGCCTCGGCTTCGGCCTTGGTGCGGTGTTGATGCAAGAGGGTAAACCAATTGCTTTCTACAGCAGGTTGCTCGGTCTTAGGGCTCAATGCAAGTCATTCGAGAAGGAGCTTATGGCGGTTTGTCTTTCGGTTCTTAAATGGAAACATTACTCGCTTGGTAGGAGGTTTGTGGTGCGGTCTGATCAGCAGAGTTTGAGGTTTATAACGCAACAAACAGAAATAGGGCCGACTACATAAAATGGGTGAGTAAACTAATGGGCTTTGATTTTGAAGTCCACTACAAACCGGGCTCTTCCAATCGTGTTGTTGGTGTGTTGTCCAATAGAAGGAGAAGTGGAGTTTGGGGCTGTTGAAACCACGCACGTAGTAGCGTGGGAAGGGTGGAAAAGGAGATTGCAGTGGATTCGTGGATTGAGGAAATTAAACTAGAGATATTAGGTTGGGTAATACCCAAACGAGCCATTGTGATACCATCTCTCTTACATGAATACCACGACAGCCCTATGGGAGGTAACTTAAGGGATGTAAAAACATACCTATAGATAGCTCGTCGGGGATGCACAAGGAAATAACTGAGTATGCGTGAAGGTGTGCGGTACATCAAAGAAATAAATTGTCTCAATAGAATCCCTCTGAATTGCTCCAACCGCTGCCTATTCCAACACGGGTTTGAGACGATATTTCAATGAATTTTTTAGAAGGGTTGCCAATTTCCAAAGGGGTGGACACTATATTCGTAGTGGTTGATCCTCTGTCAAATTAATGTGCATTTTATTGGCCTACTACACCCTTTTACATCTATGTGGTTGAGGGATTCACGAAGGAGGTAGTACGCCTTCACGGTTTCCCCTCTTCAATTGTCTCAAATCGTGACCGTGTGTTCTTGAGCGTTTTTTGGAAGGAGATGTTTAAGCTTTACGGAACCATATTAAAAGGGAGCACGGCCTACCATCCTCAAATGGATGGGCAGACCGAGGTATTAAACAAGAAGTTTGAAACGTATTTGAATGTTTTGCTTCCGGCAACCCAAGGCCTGGGAAAGGTGGCGAGCAAGGCCTACCATCCTCAAATGGATAGGCAGACCGAGGTATTAAACAAAAATCTTGAAACGTATTTGAGTCTTTTGCTTCCGGGCAACCCAAGGCGTGGGCAAGGTGGCTCCATTGGGCAGAGTACTCGGATAATTCTGATCCCCACAACTCAACAAAAATGACTCCGCTCAAAGTAGTCTATGGGAGAGACCCACCACCCATCATTAAGGTTGGGCACGGCCAAACCACAGTGGGCAGCTTGGAGGAATCATTGTTGGAGCGTGACTTCATGTCGGATGAACTCCGCATAAACTTGTTAAGAGCGCAACAACGAATGAAGGACCTCGCTGATCGCAAAAGGAGGGATGAAGAGTTTAATGTGGGTGACATTGTTTACTTGAAATTGCAACCATATCGGCATAAATCACTAGCAAGGAGACCTTTTGAGAAGCTAGCCGCTCGTTTCTATGGCCCTTTTGAGATCACTCAACGCATGGGAAAGGTTGCATACCAACTGAAGTTCCGGAAAGTAAAATTCACCCGGTTTTCATATTTCTCAACTCAAAAGGGTTGTTGGTCACACCATAACACCACTCAATCTACCCGCACAGCTCACTCATGAGTTAGAGCTACCTGTGTAACCGAAAGAATTAAGAGATGTGCGCACAACACAGAGGAAATGCATGGCAGTGAGGTATTGGAAGTGTTGATCAAGTGGAAAGGCTTATCGAAGTTTGAAGCAACATGGGAAGAAGCCAACATACTCCAATTGCGTTTTCCAGCCTTCCACCTTGAGGACAAGGTGAGTGTTTGGGGGAGGGCCATTGCAATGAACTCAACTATCCCACCTGCTACCCGTACTTTTATGTGAGGAGAAGACACAAACAGCTACATGACAACGGTGGGGCAGCAACCTAAGTACAAGGGGAACCACTAAGCAAGCAGGCAGCGGCTACAACTCTTGGGAGCTCATTAAAAGAATTTGTCTTGCTGCAAGTACTTTTGTCTTTTTTACTTTTTGTTAATTGCATTTGTCTTATATCATGGTTTGTAATTAAAAGGGAGAGGGAAGAGAACAGAAATCATCTTGGGAATTATTGGGTAGTAAAGGGAGAGAAGAGAACCTCTCGAATGTTCTCAACTTTTGTAGTTACAAGCTTCAAGCTTTCTTAATCAAATATACAATCTTCCCCTACATAGTTGTGTTTGCTTGCTGTGAGTGTTGGTAGCAGGTGCATAGCCTATCTTGTTTTGTTCCATCCCTCTGATATTTATCTTAGGTGGTCTCCCTTAGTCCCTTGTACTCTAAACATTTGCTTAGTACAATTCAGGTGATATTTCTAGATATTAGTATACAGTCTACTGCTGCTCATTTGTTTTCTTGACACCCCACCCCACCCTTCCCTAAACAAATCAAAGGAAGAAACTGAAAACAAGACTAGAGAAAGTCTGTCCCGTATCTCTGTAAAGCGGCATCTAACATGGACCTTAAAGGGGGTGTGGTTGTAGCCATTGTAGCTTTTCTTAGAACCAAAGTCTTTTTGATATAAATTATTTCTCATCACGGGCCGAGCCAAACTGCATGCTGAACAGATGGAATGCTAAATCAGATATTCGTATTTAGCAACTTATATTGCTCATCTTACCTTCATGGTGCTCCTATCTTCCCCTTCTATTTCTGTGTTGGTTGTTCTTGTTGGAAATAATGCAAAGAAAGTATTTTACCATTTGTGAAAATGTCCCACATTGATAGAAATTAAATGTATGGTTTTCAAGGGAAGTATTTAAAGTAAAGGGGATTGTCCCACATGGGAAGAAAATGAACTCTTCCTTTTGTTTAAATATAGGGAATGAATGTTTATACTTTGAAGTGCTTCCCCTAGTGGTTTGGGCTAGAAAGGGAATCCCCACACGCGCGCCGCCGCCGTCCGGCCGGTTCGTGGCACGTGCGCGGTGTGGTGGGGCCTCCTTTTTGGGCCATGTCGTAACTGACGGTCCAGTTATTATGAGACCGTTCAGTTACGTAGCCCATTCCGTTCCTTGATTTTCGCTTCCGTTTTAATTCCCAAATCAATTCTGATTTTCAGTTTAATTGGCAGTTAATTGCATGATCAATTCTAATTGGCAGTTACAAGTGTTTAATTGCCCAATTTAATTCTAAATTCGGTTACAAACCCTTGCTTGCTTTATAATCAGTTTTGGGGAATCAGTTTTTTATACACCGAAAAATTCCAACTCTCTTCTCCTATTCTTCTGAGCATATTATGAGTTCCTAGTTCGTTTTATTCGAGTGCACGTTAAAACGAATTGCTGTGTAAAATCTTGGGGGGCAACGCCTATTACGATTGCACCATAGTCGGGGCGAATTTTGCTTCTAAGACAGTGTTTGCATAACACGTCACAGCTTTATATACATCAAATATTCGGCCCACATTTCATTTACATTTTCGGATTTTACAGTATTCTTTCCTACAGTTCTATCTCGTGATCTTACCACTTTAGGAAGACATGAAAAGGAGCTGGATGATTGAGCTTGACTTCTTTAGGTAGGCTCTAGAGTCTGAAAACCTGAACTTATGCAGATTACAAGGTATGTCTTGATAGGAGACCTTAGTTGGCAGATAGCTCTTATTTTTATCCTTTGTAATGTCAGTTTTATGAAACCCTATTTGACATCTCGATGTGGCCAAAAGTTGTTATTGGAGCACCTACATTTGTAGTCTTCTTTCCAGAATTACAATTGGTTTGTTCGAGTACCCAAACAGACGTGGGCCACTTTTTAAGTGCTTTTGTATCGTTTGAAGTGGCTGATTTAGTCACTTTTGTTACTATTGCTCGCTGCATTGTATTATAGTGCGGGATCTCGGTAGTTCCTACAATATATGCAGGATATTAGTTCTATTATTATCTATGCAACAGGAGGAGCAACAAATTTTTGTTATGGTTCCTACAGAAGTAGGAACACCGTGTTTTCCACTTATTCTATATAATTGTTCTTTTCTTCGAGGACCTGAAGAAGATGGTCACGTGTTTCTTGTTCCCCGTTACAACAAGCCCTTTTTTGCCCGTTATGAATGACGTGTTTTATAATCTATAAGTTGTTAGAAACCTTCCATGTTCCTCTGAAATTCCCATTTATATCCCACCAACGGGGGTTTAACTTGAATGTTATAAAGCTTTTAATTTAAGACATTTATCGTTGAATTCATGGGTAGTGTGTTACTCCCATTTGAGATTGCTAGTCACAACTATATGGTTGTGAGACTTATGACTTTTGATCAGTGACGAACAAAATTTACTGCCTTGTAAGTTAACAGGAAGTCCATAAAATATTACATACGTCGTATTAGGTTTTTTTTATTCCCAGAACATCTTGATACACTCTGTTTCATAATCATCAGCAGTACAACATTGGGAGACAAGGTAATGGCAATTGAAACCCTAAAATCAACAAAGGAGCTAGCAGCAGAAGGTCAGAAGCATTTAGAAGAGACAGTTGAGGCCGCATTTCGGATCTTATATGCAATGAATGATGAGCTCTGCAGCCCAACCTTGTGGTCTACAACTACCTCTTCTCCTTCTGTCATTCCTGATACTAGTACTCCCACTACTATCACCGGCAATGGGCATAGTGAGGGTTCAAATGGTGATGTTTCGTTAGATTCAACCCACCAATTTGATATGGGTGGTGGCACTCTTGAACAAGCTCGTCTTCGTTATAAATCTTCTGTGGCTTCTCTTCGTGTTGTTCTCAATGCCATGCCTCAGAACCACAAGGTAAGTTTCTCTAATTCTCTTTTTTTATTGCAAGAATTTAAACTTGATAATTGAACTTTGTGACATTGTTCTTTCTTAAAATTGAATGACATTTGTTTAATAGAATCATAGGGCTTTAGAAATTTTACATCAAGTGTTCTCAAGATATGAGAGTTATAGAGGGATCCCTCAAGATATTCGAACTCATGCTGATTAACATTCTATTTTGTACAGGAAAATGGCTAATTGTAGTTGAAAGGAAAAACAATCCCTGGAAACCAAGTCTCAAATTTCCCTCAGTTTTATTTTTGAAAACAGAAATAATGCAAGTTCAAATTAGTTTCCAAAGATGGAAAAGACTAATCCTCCTTTGAAGAAGGGTGCCTTACCTTTCATTTCTCCTCCCTTAAACCAAATACATCCTAAAGGAGTGGTTTTGTTGTCAGCATTTACTCCGTATTTAAAAAAGAGATACACTATCCTTAAACGACCGTATTTTTAAAAGAGATACACTATCCTTTTTGACATGTTTTGGTCCCCACTTCCAATATACGGAGTATTAATATTTCTCTCTTTCTTGTGGTCCCCACACTTACTCACATAATCTTTTAACTATAATAAATAATTTACCCATTACCCTACTTTCATATTATTTTAATAAATTCAACTCACTCTCCTAAAAACTGTGTGCCGGTCAAAGTGTATCTCTTTTTAAAATACAGAGGGTGTACTTTACATGCAAAATACAGGCCATAGGCGATCGGCCATATGGGTCGACTATGATCATAGTTTTCTTGTTTGCTCAACGTTTTTCCTCTTCAATCAATATTCAATTATTAGATTTTCAAACAATAGGGTTGCTGCTGCTGTGTTTGTAGGCATCTGACAGACTTGTGCAATTGTTTTCCTTTTGGTCAGGAAGATGTGGATGGTTCTGTCTCTAAAGAAGATGAAGCTGAAATCGGAAAGTTAGAAGATCAAGTATCTAGTTTGAGGATGGTAAAGTTAAAACTTAATAACTGTTGGTTGTTCTTATCTCGAGAAAAATTTACTGTTTATAAGTCCAGCTCCTGTGAACTATTTCCGTTTTCATGGAAGCATGATGTTGAGTACTTATGTGAGGTCATGTACATCAAACTTATTAGCTGGAAATAATAGCTTTAAGATCAAATGTTCCTCGTGATTGTTGTTTAATTGCTACTGACCAATGTGACTGATTGAATGGGTTTTATTTAAAGGATATACCGATATATTAAGTTATTTGGATTAAATACTCCGTATAAGATCGTGTCATTTTAGATAGAGGGAAAATCTCTACTGAGTATTTATTTTTCTGGTTTTGTAATTGCAGGATCTTGCAAATAAGAACAAGCACCTCAAGCATCTCATAGATCAGTTTCGAGATCTTATTACAGATATATCAACTTGGCAAAGTCCTTGTTCTGTTGCAAGATAGCTTGTTTTGAAGCAAAATGCATCAGCAAGTCCCGTACTTGTTTTTCTCGAAAGGGAGCTTCCATCACAATCTTTGCAATAGTTGGAAGAAATTGACTCCTCCTGTCAACTTCGAAACATTTATTGACAGGAATTGTGAATGCTGCAACTCATATTGGTATGTTTTGTCAGCAATAATTTTGATTGAAGAAATCCCTTGTCATGTACTAGGAGTAAACCAAACAATGTCTTAGACCTATTGAAAATGATTCTACTTTCAAACCAAAATGTTGGAGGCTCCCCTTACCATTCTCCCCCACTTTTAAAGTGTCTGACCCGCTTAAACGAGTTTGGGGTATCGGAGAGGTGTTCCGTCCCGAAAGGGTTTTTCATCTTACCTATATCAGAAAGTGTACTAGCAGTTGATACTAGCCTAGAACTTAACCTGGAAAACTCAGTCTAAGTAATTTTTATTTTTATTGAAAGAAAAGATACATGAAAAATAGGATAGTCTTTACTCAAGATTATTTCCTAACTTATCTAAAGAACTGAAATAAGAAAATTTACTATCTAATGGTTAAA

mRNA sequence

ATGCAAATTGAAATCTCGTTTCCCATTCGTTTCCGGGATGAATTCAGTTTCAAACACGTCTCCATTTTTCTGAAACGGTTTCGCGCGTTCCGAAACGCGTTTCCCGGTTTCCGCAGTACAACATTGGGAGACAAGGTAATGGCAATTGAAACCCTAAAATCAACAAAGGAGCTAGCAGCAGAAGGTCAGAAGCATTTAGAAGAGACAGTTGAGGCCGCATTTCGGATCTTATATGCAATGAATGATGAGCTCTGCAGCCCAACCTTGTGGTCTACAACTACCTCTTCTCCTTCTGTCATTCCTGATACTAGTACTCCCACTACTATCACCGGCAATGGGCATAGTGAGGGTTCAAATGGTGATGTTTCGTTAGATTCAACCCACCAATTTGATATGGGTGGTGGCACTCTTGAACAAGCTCGTCTTCGTTATAAATCTTCTGTGGCTTCTCTTCGTGTTGTTCTCAATGCCATGCCTCAGAACCACAAGGAAGATGTGGATGGTTCTGTCTCTAAAGAAGATGAAGCTGAAATCGGAAAGTTAGAAGATCAAGTATCTAGTTTGAGGATGGATCTTGCAAATAAGAACAAGCACCTCAAGCATCTCATAGATCAGTTTCGAGATCTTATTACAGATATATCAACTTGGCAAAGTCCTTGTTCTGTTGCAAGATAGCTTGTTTTGAAGCAAAATGCATCAGCAAGTCCCGTACTTGTTTTTCTCGAAAGGGAGCTTCCATCACAATCTTTGCAATAGTTGGAAGAAATTGACTCCTCCTGTCAACTTCGAAACATTTATTGACAGGAATTGTGAATGCTGCAACTCATATTGGTATGTTTTGTCAGCAATAATTTTGATTGAAGAAATCCCTTGTCATGTACTAGGAGTAAACCAAACAATGTCTTAGACCTATTGAAAATGATTCTACTTTCAAACCAAAATGTTGGAGGCTCCCCTTACCATTCTCCCCCACTTTTAAAGTGTCTGACCCGCTTAAACGAGTTTGGGGTATCGGAGAGGTGTTCCGTCCCGAAAGGGTTTTTCATCTTACCTATATCAGAAAGTGTACTAGCAGTTGATACTAGCCTAGAACTTAACCTGGAAAACTCAGTCTAAGTAATTTTTATTTTTATTGAAAGAAAAGATACATGAAAAATAGGATAGTCTTTACTCAAGATTATTTCCTAACTTATCTAAAGAACTGAAATAAGAAAATTTACTATCTAATGGTTAAA

Coding sequence (CDS)

ATGCAAATTGAAATCTCGTTTCCCATTCGTTTCCGGGATGAATTCAGTTTCAAACACGTCTCCATTTTTCTGAAACGGTTTCGCGCGTTCCGAAACGCGTTTCCCGGTTTCCGCAGTACAACATTGGGAGACAAGGTAATGGCAATTGAAACCCTAAAATCAACAAAGGAGCTAGCAGCAGAAGGTCAGAAGCATTTAGAAGAGACAGTTGAGGCCGCATTTCGGATCTTATATGCAATGAATGATGAGCTCTGCAGCCCAACCTTGTGGTCTACAACTACCTCTTCTCCTTCTGTCATTCCTGATACTAGTACTCCCACTACTATCACCGGCAATGGGCATAGTGAGGGTTCAAATGGTGATGTTTCGTTAGATTCAACCCACCAATTTGATATGGGTGGTGGCACTCTTGAACAAGCTCGTCTTCGTTATAAATCTTCTGTGGCTTCTCTTCGTGTTGTTCTCAATGCCATGCCTCAGAACCACAAGGAAGATGTGGATGGTTCTGTCTCTAAAGAAGATGAAGCTGAAATCGGAAAGTTAGAAGATCAAGTATCTAGTTTGAGGATGGATCTTGCAAATAAGAACAAGCACCTCAAGCATCTCATAGATCAGTTTCGAGATCTTATTACAGATATATCAACTTGGCAAAGTCCTTGTTCTGTTGCAAGATAG

Protein sequence

MQIEISFPIRFRDEFSFKHVSIFLKRFRAFRNAFPGFRSTTLGDKVMAIETLKSTKELAAEGQKHLEETVEAAFRILYAMNDELCSPTLWSTTTSSPSVIPDTSTPTTITGNGHSEGSNGDVSLDSTHQFDMGGGTLEQARLRYKSSVASLRVVLNAMPQNHKEDVDGSVSKEDEAEIGKLEDQVSSLRMDLANKNKHLKHLIDQFRDLITDISTWQSPCSVAR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo19276.1Spo19276.1mRNA


Homology
BLAST of Spo19276.1 vs. NCBI nr
Match: gi|902194467|gb|KNA12562.1| (hypothetical protein SOVF_124810 [Spinacia oleracea])

HSP 1 Score: 345.5 bits (885), Expect = 6.900e-92
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1

		  

Query: 47  MAIETLKSTKELAAEGQKHLEETVEAAFRILYAMNDELCSPTLWSTTTSSPSVIPDTSTP 106
           MAIETLKSTKELAAEGQKHLEETVEAAFRILYAMNDELCSPTLWSTTTSSPSVIPDTSTP
Sbjct: 1   MAIETLKSTKELAAEGQKHLEETVEAAFRILYAMNDELCSPTLWSTTTSSPSVIPDTSTP 60

Query: 107 TTITGNGHSEGSNGDVSLDSTHQFDMGGGTLEQARLRYKSSVASLRVVLNAMPQNHKEDV 166
           TTITGNGHSEGSNGDVSLDSTHQFDMGGGTLEQARLRYKSSVASLRVVLNAMPQNHKEDV
Sbjct: 61  TTITGNGHSEGSNGDVSLDSTHQFDMGGGTLEQARLRYKSSVASLRVVLNAMPQNHKEDV 120

Query: 167 DGSVSKEDEAEIGKLEDQVSSLRMDLANKNKHLKHLIDQFRDLITDISTWQSPCSVAR 225
           DGSVSKEDEAEIGKLEDQVSSLRMDLANKNKHLKHLIDQFRDLITDISTWQSPCSVAR
Sbjct: 121 DGSVSKEDEAEIGKLEDQVSSLRMDLANKNKHLKHLIDQFRDLITDISTWQSPCSVAR 178

BLAST of Spo19276.1 vs. NCBI nr
Match: gi|902217123|gb|KNA17618.1| (hypothetical protein SOVF_078550 [Spinacia oleracea])

HSP 1 Score: 316.2 bits (809), Expect = 4.500e-83
Identity = 165/181 (91.16%), Postives = 169/181 (93.37%), Query Frame = 1

		  

Query: 44  DKVMAIETLKSTKELAAEGQKHLEETVEAAFRILYAMNDELCSPTLWSTTTSSPSVIPDT 103
           DKVM  +TLKSTKELAAEG+KHLEETVEAAFRIL AMNDELCSPTLWSTTTSSPSVIPDT
Sbjct: 3   DKVMTTDTLKSTKELAAEGRKHLEETVEAAFRILSAMNDELCSPTLWSTTTSSPSVIPDT 62

Query: 104 STPTTITGNGHSEGSNGDVSLDSTHQFDMGGGTLEQARLRYKSSVASLRVVLNAMPQNHK 163
           ST TTITGNGHSEGSN DVSLDSTH FDMGGGTLEQARLRYKSSVASLRVVLNAMPQ HK
Sbjct: 63  STATTITGNGHSEGSNSDVSLDSTHHFDMGGGTLEQARLRYKSSVASLRVVLNAMPQYHK 122

Query: 164 EDVDGSVSKEDEAEIGKLEDQVSSLRMDLANKNKHLKHLIDQFRDLITDISTWQSPCSVA 223
           E+VDGS SK D AEIG LE Q+SSLRMDLANKNKHLKHLIDQFRDLITDISTWQSPCSVA
Sbjct: 123 EEVDGSASKGDGAEIGNLEYQLSSLRMDLANKNKHLKHLIDQFRDLITDISTWQSPCSVA 182

Query: 224 R 225
           R
Sbjct: 183 R 183

BLAST of Spo19276.1 vs. NCBI nr
Match: gi|731338898|ref|XP_010680563.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 30 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 274.6 bits (701), Expect = 1.500e-70
Identity = 142/181 (78.45%), Postives = 157/181 (86.74%), Query Frame = 1

		  

Query: 44  DKVMAIETLKSTKELAAEGQKHLEETVEAAFRILYAMNDELCSPTLWSTTTSSPSVIPDT 103
           DK MA E  KSTKELAAEGQKHLEETV+AAF+IL AMNDELCSP LW TTTSS ++I D+
Sbjct: 3   DKEMATENQKSTKELAAEGQKHLEETVDAAFQILSAMNDELCSPALWCTTTSSSALITDS 62

Query: 104 STPTTITGNGHSEGSNGDVSLDSTHQFDMGGGTLEQARLRYKSSVASLRVVLNAMPQNHK 163
           ST T IT NGHSEGSNGDV  DS +  DMGGG LE+ARL+YKSSVASLR VLN+MPQ HK
Sbjct: 63  STATAITANGHSEGSNGDVLSDSNNHLDMGGGALEEARLQYKSSVASLRAVLNSMPQYHK 122

Query: 164 EDVDGSVSKEDEAEIGKLEDQVSSLRMDLANKNKHLKHLIDQFRDLITDISTWQSPCSVA 223
           EDV  S S++DEAEIGKLE+QVS LRM+LANKNKHLKHLIDQFRDLITD+STWQSPC+VA
Sbjct: 123 EDVGASGSQDDEAEIGKLEEQVSKLRMELANKNKHLKHLIDQFRDLITDLSTWQSPCAVA 182

Query: 224 R 225
           R
Sbjct: 183 R 183

BLAST of Spo19276.1 vs. NCBI nr
Match: gi|902142133|gb|KNA04745.1| (hypothetical protein SOVF_196430 [Spinacia oleracea])

HSP 1 Score: 196.8 bits (499), Expect = 4.000e-47
Identity = 105/113 (92.92%), Postives = 106/113 (93.81%), Query Frame = 1

		  

Query: 80  MNDELCSPTLWSTTTSSPSVIPDTSTPTTITGNGHSEGSNGDVSLDSTHQFDMGGGTLEQ 139
           MNDELCSPTLWSTTTS PSVIP TSTP TITGNGHSEGSNGDVSLDSTHQF MGGGTLEQ
Sbjct: 1   MNDELCSPTLWSTTTSYPSVIPGTSTPITITGNGHSEGSNGDVSLDSTHQFYMGGGTLEQ 60

Query: 140 ARLRYKSSVASLRVVLNAMPQNHKEDVDGSVSKEDEAEIGKLEDQVSSLRMDL 193
           ARLRYKSSVASLRVVLNAM QNHKEDVDGSVSKEDEAEI KLEDQVSSLRM +
Sbjct: 61  ARLRYKSSVASLRVVLNAMLQNHKEDVDGSVSKEDEAEIEKLEDQVSSLRMHM 113

BLAST of Spo19276.1 vs. NCBI nr
Match: gi|590670226|ref|XP_007037996.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 185.7 bits (470), Expect = 9.200e-44
Identity = 107/182 (58.79%), Postives = 131/182 (71.98%), Query Frame = 1

		  

Query: 53  KSTKELAAEGQKHLEETVEAAFRILYAMNDELCSPTLWST--TTSSPSVIPDTSTPTTIT 112
           K+T+ELAAEG KHLEET+EAAF+IL +MNDELC+P LWST  ++S+ +    T+T  T  
Sbjct: 17  KTTQELAAEGLKHLEETIEAAFQILSSMNDELCNPALWSTIPSSSNSTTASSTTTANTAA 76

Query: 113 GNGHSEGSNGDVSLDSTHQFDMGG------GTLEQARLRYKSSVASLRVVLNAMPQNHK- 172
            NG S  SNGD + D  H  +MGG      G L++ARLRYK+SVASLR VL A+P + K 
Sbjct: 77  PNGPSSLSNGDSASDGGHHLEMGGIGGSGNGALDEARLRYKNSVASLRAVLAAIPNSQKA 136

Query: 173 ---EDVDGSVSKEDEAEIGKLEDQVSSLRMDLANKNKHLKHLIDQFRDLITDISTWQSPC 223
              E    + S  DEAEI KLEDQ S+LR +LANKN++LK LIDQ RDLITDISTWQSPC
Sbjct: 137 KAFETGSTASSPADEAEIDKLEDQASNLRKELANKNEYLKLLIDQLRDLITDISTWQSPC 196

BLAST of Spo19276.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QZ72_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_124810 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 4.800e-92
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1

		  

Query: 47  MAIETLKSTKELAAEGQKHLEETVEAAFRILYAMNDELCSPTLWSTTTSSPSVIPDTSTP 106
           MAIETLKSTKELAAEGQKHLEETVEAAFRILYAMNDELCSPTLWSTTTSSPSVIPDTSTP
Sbjct: 1   MAIETLKSTKELAAEGQKHLEETVEAAFRILYAMNDELCSPTLWSTTTSSPSVIPDTSTP 60

Query: 107 TTITGNGHSEGSNGDVSLDSTHQFDMGGGTLEQARLRYKSSVASLRVVLNAMPQNHKEDV 166
           TTITGNGHSEGSNGDVSLDSTHQFDMGGGTLEQARLRYKSSVASLRVVLNAMPQNHKEDV
Sbjct: 61  TTITGNGHSEGSNGDVSLDSTHQFDMGGGTLEQARLRYKSSVASLRVVLNAMPQNHKEDV 120

Query: 167 DGSVSKEDEAEIGKLEDQVSSLRMDLANKNKHLKHLIDQFRDLITDISTWQSPCSVAR 225
           DGSVSKEDEAEIGKLEDQVSSLRMDLANKNKHLKHLIDQFRDLITDISTWQSPCSVAR
Sbjct: 121 DGSVSKEDEAEIGKLEDQVSSLRMDLANKNKHLKHLIDQFRDLITDISTWQSPCSVAR 178

BLAST of Spo19276.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RDV9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_078550 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 3.100e-83
Identity = 165/181 (91.16%), Postives = 169/181 (93.37%), Query Frame = 1

		  

Query: 44  DKVMAIETLKSTKELAAEGQKHLEETVEAAFRILYAMNDELCSPTLWSTTTSSPSVIPDT 103
           DKVM  +TLKSTKELAAEG+KHLEETVEAAFRIL AMNDELCSPTLWSTTTSSPSVIPDT
Sbjct: 3   DKVMTTDTLKSTKELAAEGRKHLEETVEAAFRILSAMNDELCSPTLWSTTTSSPSVIPDT 62

Query: 104 STPTTITGNGHSEGSNGDVSLDSTHQFDMGGGTLEQARLRYKSSVASLRVVLNAMPQNHK 163
           ST TTITGNGHSEGSN DVSLDSTH FDMGGGTLEQARLRYKSSVASLRVVLNAMPQ HK
Sbjct: 63  STATTITGNGHSEGSNSDVSLDSTHHFDMGGGTLEQARLRYKSSVASLRVVLNAMPQYHK 122

Query: 164 EDVDGSVSKEDEAEIGKLEDQVSSLRMDLANKNKHLKHLIDQFRDLITDISTWQSPCSVA 223
           E+VDGS SK D AEIG LE Q+SSLRMDLANKNKHLKHLIDQFRDLITDISTWQSPCSVA
Sbjct: 123 EEVDGSASKGDGAEIGNLEYQLSSLRMDLANKNKHLKHLIDQFRDLITDISTWQSPCSVA 182

Query: 224 R 225
           R
Sbjct: 183 R 183

BLAST of Spo19276.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C5H4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g135260 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.000e-70
Identity = 142/181 (78.45%), Postives = 157/181 (86.74%), Query Frame = 1

		  

Query: 44  DKVMAIETLKSTKELAAEGQKHLEETVEAAFRILYAMNDELCSPTLWSTTTSSPSVIPDT 103
           DK MA E  KSTKELAAEGQKHLEETV+AAF+IL AMNDELCSP LW TTTSS ++I D+
Sbjct: 3   DKEMATENQKSTKELAAEGQKHLEETVDAAFQILSAMNDELCSPALWCTTTSSSALITDS 62

Query: 104 STPTTITGNGHSEGSNGDVSLDSTHQFDMGGGTLEQARLRYKSSVASLRVVLNAMPQNHK 163
           ST T IT NGHSEGSNGDV  DS +  DMGGG LE+ARL+YKSSVASLR VLN+MPQ HK
Sbjct: 63  STATAITANGHSEGSNGDVLSDSNNHLDMGGGALEEARLQYKSSVASLRAVLNSMPQYHK 122

Query: 164 EDVDGSVSKEDEAEIGKLEDQVSSLRMDLANKNKHLKHLIDQFRDLITDISTWQSPCSVA 223
           EDV  S S++DEAEIGKLE+QVS LRM+LANKNKHLKHLIDQFRDLITD+STWQSPC+VA
Sbjct: 123 EDVGASGSQDDEAEIGKLEEQVSKLRMELANKNKHLKHLIDQFRDLITDLSTWQSPCAVA 182

Query: 224 R 225
           R
Sbjct: 183 R 183

BLAST of Spo19276.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QBW2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_196430 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.800e-47
Identity = 105/113 (92.92%), Postives = 106/113 (93.81%), Query Frame = 1

		  

Query: 80  MNDELCSPTLWSTTTSSPSVIPDTSTPTTITGNGHSEGSNGDVSLDSTHQFDMGGGTLEQ 139
           MNDELCSPTLWSTTTS PSVIP TSTP TITGNGHSEGSNGDVSLDSTHQF MGGGTLEQ
Sbjct: 1   MNDELCSPTLWSTTTSYPSVIPGTSTPITITGNGHSEGSNGDVSLDSTHQFYMGGGTLEQ 60

Query: 140 ARLRYKSSVASLRVVLNAMPQNHKEDVDGSVSKEDEAEIGKLEDQVSSLRMDL 193
           ARLRYKSSVASLRVVLNAM QNHKEDVDGSVSKEDEAEI KLEDQVSSLRM +
Sbjct: 61  ARLRYKSSVASLRVVLNAMLQNHKEDVDGSVSKEDEAEIEKLEDQVSSLRMHM 113

BLAST of Spo19276.1 vs. UniProtKB/TrEMBL
Match: A0A061FZZ9_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_014655 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 6.400e-44
Identity = 107/182 (58.79%), Postives = 131/182 (71.98%), Query Frame = 1

		  

Query: 53  KSTKELAAEGQKHLEETVEAAFRILYAMNDELCSPTLWST--TTSSPSVIPDTSTPTTIT 112
           K+T+ELAAEG KHLEET+EAAF+IL +MNDELC+P LWST  ++S+ +    T+T  T  
Sbjct: 17  KTTQELAAEGLKHLEETIEAAFQILSSMNDELCNPALWSTIPSSSNSTTASSTTTANTAA 76

Query: 113 GNGHSEGSNGDVSLDSTHQFDMGG------GTLEQARLRYKSSVASLRVVLNAMPQNHK- 172
            NG S  SNGD + D  H  +MGG      G L++ARLRYK+SVASLR VL A+P + K 
Sbjct: 77  PNGPSSLSNGDSASDGGHHLEMGGIGGSGNGALDEARLRYKNSVASLRAVLAAIPNSQKA 136

Query: 173 ---EDVDGSVSKEDEAEIGKLEDQVSSLRMDLANKNKHLKHLIDQFRDLITDISTWQSPC 223
              E    + S  DEAEI KLEDQ S+LR +LANKN++LK LIDQ RDLITDISTWQSPC
Sbjct: 137 KAFETGSTASSPADEAEIDKLEDQASNLRKELANKNEYLKLLIDQLRDLITDISTWQSPC 196

BLAST of Spo19276.1 vs. ExPASy Swiss-Prot
Match: MED30_ARATH (Mediator of RNA polymerase II transcription subunit 30 OS=Arabidopsis thaliana GN=MED30 PE=1 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.400e-36
Identity = 97/192 (50.52%), Postives = 125/192 (65.10%), Query Frame = 1

		  

Query: 45  KVMAIETLKSTKELAAEGQKHLEETVEAAFRILYAMNDELCSPTLWSTTTSSPSVIPDTS 104
           K ++  T  +T+ELA EG+K LEET+EAAF+I+ AMNDELC+P+LWST+ ++PS     S
Sbjct: 4   KQVSTTTTMTTQELAMEGEKQLEETIEAAFQIISAMNDELCNPSLWSTS-ATPS-----S 63

Query: 105 TPTTITGNGHSEGSNGDVSLDST--HQFDMGGG--------TLEQARLRYKSSVASLRVV 164
             TT   NG +  S    ++D T  H    GGG         L++A LRYK+SV SLR V
Sbjct: 64  AATTTGSNGSALVSADAAAIDGTSHHSESAGGGGGGGSGNSVLDEASLRYKNSVTSLRAV 123

Query: 165 LNAMPQNHK----EDVDGSVSKEDEAEIGKLEDQVSSLRMDLANKNKHLKHLIDQFRDLI 223
           L A+P + K    E  +G  S E E EI KLE+Q  SLRM++A KN H+K LID+ R+LI
Sbjct: 124 LAAIPNSQKAKASEMQNGLGSPESEDEIEKLEEQALSLRMEIAKKNVHVKELIDKLRELI 183

BLAST of Spo19276.1 vs. TAIR (Arabidopsis)
Match: AT5G63480.1 (unknown protein)

HSP 1 Score: 153.7 bits (387), Expect = 1.400e-37
Identity = 97/192 (50.52%), Postives = 125/192 (65.10%), Query Frame = 1

		  

Query: 45  KVMAIETLKSTKELAAEGQKHLEETVEAAFRILYAMNDELCSPTLWSTTTSSPSVIPDTS 104
           K ++  T  +T+ELA EG+K LEET+EAAF+I+ AMNDELC+P+LWST+ ++PS     S
Sbjct: 4   KQVSTTTTMTTQELAMEGEKQLEETIEAAFQIISAMNDELCNPSLWSTS-ATPS-----S 63

Query: 105 TPTTITGNGHSEGSNGDVSLDST--HQFDMGGG--------TLEQARLRYKSSVASLRVV 164
             TT   NG +  S    ++D T  H    GGG         L++A LRYK+SV SLR V
Sbjct: 64  AATTTGSNGSALVSADAAAIDGTSHHSESAGGGGGGGSGNSVLDEASLRYKNSVTSLRAV 123

Query: 165 LNAMPQNHK----EDVDGSVSKEDEAEIGKLEDQVSSLRMDLANKNKHLKHLIDQFRDLI 223
           L A+P + K    E  +G  S E E EI KLE+Q  SLRM++A KN H+K LID+ R+LI
Sbjct: 124 LAAIPNSQKAKASEMQNGLGSPESEDEIEKLEEQALSLRMEIAKKNVHVKELIDKLRELI 183

The following BLAST results are available for this feature:
BLAST of Spo19276.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902194467|gb|KNA12562.1|6.9e-92100.hypothetical protein SOVF_1248... [more]
gi|902217123|gb|KNA17618.1|4.5e-8391.1hypothetical protein SOVF_0785... [more]
gi|731338898|ref|XP_010680563.1|1.5e-7078.4PREDICTED: mediator of RNA pol... [more]
gi|902142133|gb|KNA04745.1|4.0e-4792.9hypothetical protein SOVF_1964... [more]
gi|590670226|ref|XP_007037996.1|9.2e-4458.7Uncharacterized protein isofor... [more]
back to top
BLAST of Spo19276.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QZ72_SPIOL4.8e-92100.Uncharacterized protein OS=Spi... [more]
A0A0K9RDV9_SPIOL3.1e-8391.1Uncharacterized protein OS=Spi... [more]
A0A0J8C5H4_BETVU1.0e-7078.4Uncharacterized protein OS=Bet... [more]
A0A0K9QBW2_SPIOL2.8e-4792.9Uncharacterized protein OS=Spi... [more]
A0A061FZZ9_THECC6.4e-4458.7Uncharacterized protein isofor... [more]
back to top
BLAST of Spo19276.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MED30_ARATH2.4e-3650.5Mediator of RNA polymerase II ... [more]
back to top
BLAST of Spo19276.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G63480.11.4e-3750.5unknown protein[more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 171..191
scor
NoneNo IPR availablePANTHERPTHR36406FAMILY NOT NAMEDcoord: 43..222
score: 5.7
NoneNo IPR availablePANTHERPTHR36406:SF1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 30coord: 43..222
score: 5.7

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000160 phosphorelay signal transduction system
biological_process GO:0023014 signal transduction by protein phosphorylation
biological_process GO:0052325 cell wall pectin biosynthetic process
biological_process GO:0006486 protein glycosylation
biological_process GO:0080147 root hair cell development
cellular_component GO:0005669 transcription factor TFIID complex
cellular_component GO:0016020 membrane
cellular_component GO:0009365 protein histidine kinase complex
cellular_component GO:0005768 endosome
cellular_component GO:0005802 trans-Golgi network
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0000155 phosphorelay sensor kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0042393 histone binding
molecular_function GO:0052636 arabinosyltransferase activity
RNA-Seq Expression