Spo19280 (gene) | SpinachBase

Overview


Name	Spo19280
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative
Location	chr3 : 27024628 .. 27026012 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAATTGATTAATCAATACAATAATCTTTCTTATTTCTGTTACTTAAAATTTGCAAGAAAATTAAGTCCTCATGGAAATGATGAAAGGTGTTCTAGTATTAGCAGCTTCTTTTATGGTACTAAATATTGTTGCTTATGCACAAATTCCTACTTCCCCTTGTACAGCCTCAATGCTATCAAGCTTTACTCCTTGCGTAAACTATCTTACCAACAGCAGTGGCACCGGATCATCACCAACAACCGATTGCTGTAACTCGTTAAGGAATCTTATGAGCAATGGTACTGACTGTGTTTGTCAAATTGTTACTGGAGGTGTTCCTTTCCGCCTTCCTATCAACCGCACCACTGCTATTTCTCTCCCCAGGGCTTGCAAACAACCTGGTGTTCCACTTCAATGCAAAGGTGATATTACTATAACCCCTCTACTTCCGTTTCTTACTAAAGGGATCCTGTTTACTTGCTTGCAATATTTGAGGCTAATTTTCGTAACTACTCCCTCTATTCCTAAATATGTGTCATATTTGGATGAATGCTGAGAAGGGTGTAAGAATGATTAGGAGTGTTTTTCTTTGGGGGAAAGCATAAAGTAGATAATTGTTTATTGATAAAGTACAAATAAAATTTGATGGGGGATTGGAAAGTGGGAAAATTGTAGAATGTGTAAGAAAAAATGGGAAAAGTGTATGTTCAAAAATAGAAACATAACACTTATAAGGGAACGTTATATTTAGAAACAGGACAAGTATTTAGGAACGGAGGGAGTATTATTGTGTTTGATCCTAATGAATTTCCCTATGATTTCAGCTTCTCCTGGTGCTCCAGTTCCAGCTCCAGGTACAATTACTTCTTATCCTTTCTCTTCTCATTTCATGAAACCTCACTATCAAATCAAATAACTAGAATATCTTTGTTTAAAGTTTCTGTCGTTGACTAATATATTAGTGACTAGTTAATTGGATAAATGTTTATTGATGCTTGCAGGTCCTGCTGCCTTCGGCCCATCTGCTTCCCCTGCATCTTCCATCTCTCCTAGTCCCGTGGGTTAGTATCTTTTATCATCAACTTAGTTTCAGTTCCATATATTATATGAGAAAAGTTAATCTGTAATACTAGCTAGCTAGTACAGTGTTTAGACTGATTCTGATCTGTTGTTTAACTATATAACAGGTACAGTTCCTACATCGGACACACCAGCCTTGGCTCCAGTCTCTGATGCAAATCCAACTCTAACTCCACCATCTACAGCAGATGGTTCTCTGCCACCAACATCCACAGCTACAGGAGCGGGTTCTTCTCTCAATCCTTCAGCAGCAATGCCTTCTCTGAGTATTTCACCTGCCGTCCTGCTTCTATCAGTTGCTGTCGCGATGATGAAGTACTACTAG

mRNA sequence

TTAATTGATTAATCAATACAATAATCTTTCTTATTTCTGTTACTTAAAATTTGCAAGAAAATTAAGTCCTCATGGAAATGATGAAAGGTGTTCTAGTATTAGCAGCTTCTTTTATGGTACTAAATATTGTTGCTTATGCACAAATTCCTACTTCCCCTTGTACAGCCTCAATGCTATCAAGCTTTACTCCTTGCGTAAACTATCTTACCAACAGCAGTGGCACCGGATCATCACCAACAACCGATTGCTGTAACTCGTTAAGGAATCTTATGAGCAATGGTACTGACTGTGTTTGTCAAATTGTTACTGGAGGTGTTCCTTTCCGCCTTCCTATCAACCGCACCACTGCTATTTCTCTCCCCAGGGCTTGCAAACAACCTGGTGTTCCACTTCAATGCAAAGCTTCTCCTGGTGCTCCAGTTCCAGCTCCAGGTCCTGCTGCCTTCGGCCCATCTGCTTCCCCTGCATCTTCCATCTCTCCTAGTCCCGTGGGTACAGTTCCTACATCGGACACACCAGCCTTGGCTCCAGTCTCTGATGCAAATCCAACTCTAACTCCACCATCTACAGCAGATGGTTCTCTGCCACCAACATCCACAGCTACAGGAGCGGGTTCTTCTCTCAATCCTTCAGCAGCAATGCCTTCTCTGAGTATTTCACCTGCCGTCCTGCTTCTATCAGTTGCTGTCGCGATGATGAAGTACTACTAG

Coding sequence (CDS)

ATGGAAATGATGAAAGGTGTTCTAGTATTAGCAGCTTCTTTTATGGTACTAAATATTGTTGCTTATGCACAAATTCCTACTTCCCCTTGTACAGCCTCAATGCTATCAAGCTTTACTCCTTGCGTAAACTATCTTACCAACAGCAGTGGCACCGGATCATCACCAACAACCGATTGCTGTAACTCGTTAAGGAATCTTATGAGCAATGGTACTGACTGTGTTTGTCAAATTGTTACTGGAGGTGTTCCTTTCCGCCTTCCTATCAACCGCACCACTGCTATTTCTCTCCCCAGGGCTTGCAAACAACCTGGTGTTCCACTTCAATGCAAAGCTTCTCCTGGTGCTCCAGTTCCAGCTCCAGGTCCTGCTGCCTTCGGCCCATCTGCTTCCCCTGCATCTTCCATCTCTCCTAGTCCCGTGGGTACAGTTCCTACATCGGACACACCAGCCTTGGCTCCAGTCTCTGATGCAAATCCAACTCTAACTCCACCATCTACAGCAGATGGTTCTCTGCCACCAACATCCACAGCTACAGGAGCGGGTTCTTCTCTCAATCCTTCAGCAGCAATGCCTTCTCTGAGTATTTCACCTGCCGTCCTGCTTCTATCAGTTGCTGTCGCGATGATGAAGTACTACTAG

Protein sequence

MEMMKGVLVLAASFMVLNIVAYAQIPTSPCTASMLSSFTPCVNYLTNSSGTGSSPTTDCCNSLRNLMSNGTDCVCQIVTGGVPFRLPINRTTAISLPRACKQPGVPLQCKASPGAPVPAPGPAAFGPSASPASSISPSPVGTVPTSDTPALAPVSDANPTLTPPSTADGSLPPTSTATGAGSSLNPSAAMPSLSISPAVLLLSVAVAMMKYY

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo19280.1	Spo19280.1	mRNA

Homology

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BLAST of Spo19280.1 vs. NCBI nr
Match: gi|902195721|gb|KNA12934.1| (hypothetical protein SOVF_121820 [Spinacia oleracea])

HSP 1 Score: 388.7 bits (997), Expect = 6.700e-105
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1


		  
Query: 1   MEMMKGVLVLAASFMVLNIVAYAQIPTSPCTASMLSSFTPCVNYLTNSSGTGSSPTTDCC 60
           MEMMKGVLVLAASFMVLNIVAYAQIPTSPCTASMLSSFTPCVNYLTNSSGTGSSPTTDCC
Sbjct: 1   MEMMKGVLVLAASFMVLNIVAYAQIPTSPCTASMLSSFTPCVNYLTNSSGTGSSPTTDCC 60

Query: 61  NSLRNLMSNGTDCVCQIVTGGVPFRLPINRTTAISLPRACKQPGVPLQCKASPGAPVPAP 120
           NSLRNLMSNGTDCVCQIVTGGVPFRLPINRTTAISLPRACKQPGVPLQCKASPGAPVPAP
Sbjct: 61  NSLRNLMSNGTDCVCQIVTGGVPFRLPINRTTAISLPRACKQPGVPLQCKASPGAPVPAP 120

Query: 121 GPAAFGPSASPASSISPSPVGTVPTSDTPALAPVSDANPTLTPPSTADGSLPPTSTATGA 180
           GPAAFGPSASPASSISPSPVGTVPTSDTPALAPVSDANPTLTPPSTADGSLPPTSTATGA
Sbjct: 121 GPAAFGPSASPASSISPSPVGTVPTSDTPALAPVSDANPTLTPPSTADGSLPPTSTATGA 180

Query: 181 GSSLNPSAAMPSLSISPAVLLLSVAVAMMKYY 213
           GSSLNPSAAMPSLSISPAVLLLSVAVAMMKYY
Sbjct: 181 GSSLNPSAAMPSLSISPAVLLLSVAVAMMKYY 212

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BLAST of Spo19280.1 vs. NCBI nr
Match: gi|731367231|ref|XP_010695497.1| (PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 295.8 bits (756), Expect = 5.900e-77
Identity = 160/207 (77.29%), Postives = 181/207 (87.44%), Query Frame = 1


		  
Query: 6   GVLVLAASFMVLNIVAYAQIPTSPCTASMLSSFTPCVNYLTNSSGTGSSPTTDCCNSLRN 65
           GVL LAA F+VL +  YAQIPTSPCT SM+SSFTPCVNYLTNSSG+GSSPT DCCN+LR+
Sbjct: 8   GVLALAACFIVLTLPGYAQIPTSPCTTSMISSFTPCVNYLTNSSGSGSSPTADCCNALRS 67

Query: 66  LMSNGTDCVCQIVTGGVPFRLPINRTTAISLPRACKQPGVPLQCKASPGAPVPAPGPAAF 125
           LMSNGTDC+CQIVTGGVPFRLPINRT AISLPRAC QPGVP+QC+A+PGAPVPAPGP AF
Sbjct: 68  LMSNGTDCLCQIVTGGVPFRLPINRTMAISLPRACNQPGVPVQCQAAPGAPVPAPGPVAF 127

Query: 126 GPSASPASSISPSPVGTVPTSDTPALAPVSDANPTLTPPSTADGSLPPTSTATGAGSSLN 185
           GPSASPA++ISP P GT+PTS+TPAL+PVSDANPTLTPPST       TST  GAGSSL+
Sbjct: 128 GPSASPAAAISPGPSGTIPTSETPALSPVSDANPTLTPPST-------TSTTPGAGSSLS 187

Query: 186 PSAAMPSLSISPAVLLLSVAVAMMKYY 213
           PSAA PSLS SPA+L+ SVA+ +MK +
Sbjct: 188 PSAARPSLSFSPALLIPSVALMIMKLF 207

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BLAST of Spo19280.1 vs. NCBI nr
Match: gi|731367229|ref|XP_010695496.1| (PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 292.0 bits (746), Expect = 8.600e-76
Identity = 160/208 (76.92%), Postives = 181/208 (87.02%), Query Frame = 1


		  
Query: 6   GVLVLAASFMVLNIVAYAQIPTSPCTASMLSSFTPCVNYLTNSSGTGSSPTTDCCNSLRN 65
           GVL LAA F+VL +  YAQIPTSPCT SM+SSFTPCVNYLTNSSG+GSSPT DCCN+LR+
Sbjct: 8   GVLALAACFIVLTLPGYAQIPTSPCTTSMISSFTPCVNYLTNSSGSGSSPTADCCNALRS 67

Query: 66  LMSNGTDCVCQIVTGGVPFRLPINRTTAISLPRACKQPGVPLQCKASPGAPVPAPGPAAF 125
           LMSNGTDC+CQIVTGGVPFRLPINRT AISLPRAC QPGVP+QC+A+PGAPVPAPGP AF
Sbjct: 68  LMSNGTDCLCQIVTGGVPFRLPINRTMAISLPRACNQPGVPVQCQAAPGAPVPAPGPVAF 127

Query: 126 GPSASPASSISPSP-VGTVPTSDTPALAPVSDANPTLTPPSTADGSLPPTSTATGAGSSL 185
           GPSASPA++ISP P  GT+PTS+TPAL+PVSDANPTLTPPST       TST  GAGSSL
Sbjct: 128 GPSASPAAAISPGPSAGTIPTSETPALSPVSDANPTLTPPST-------TSTTPGAGSSL 187

Query: 186 NPSAAMPSLSISPAVLLLSVAVAMMKYY 213
           +PSAA PSLS SPA+L+ SVA+ +MK +
Sbjct: 188 SPSAARPSLSFSPALLIPSVALMIMKLF 208

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BLAST of Spo19280.1 vs. NCBI nr
Match: gi|702261379|ref|XP_010034882.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 isoform X2 [Eucalyptus grandis])

HSP 1 Score: 194.5 bits (493), Expect = 1.900e-46
Identity = 117/206 (56.80%), Postives = 153/206 (74.27%), Query Frame = 1


		  
Query: 7   VLVLAASFMVLNIVAYAQIPTSPCTASMLSSFTPCVNYLTNSSGTGSSPTTDCCNSLRNL 66
           +L +A +  +  +    QI T+PCT SM+SSFTPC+N++TNSS  G+SPT+ CC+SL++L
Sbjct: 13  LLAMAIALSITTVPVRGQI-TTPCTPSMISSFTPCLNFVTNSSLNGTSPTSSCCSSLKSL 72

Query: 67  MSNGTDCVCQIVTGGVPFRLPINRTTAISLPRACKQPGVPLQCKASPGAPVPAPGPAAFG 126
            S G  C+C IV GG+PF++PINRT AISLPRAC  P VPLQCKA+ GAP+PAPGPA  G
Sbjct: 73  TSGGMGCLCLIVGGGIPFQMPINRTLAISLPRACNMPSVPLQCKAT-GAPLPAPGPATLG 132

Query: 127 PSASPASSISPSPVG-TVPTSDTPALAPVSDANPTLTPPSTADGSLPPTSTATGAGSSLN 186
           P+ SP+SS + SP+G T P  D+PALAP S+  P LTPPS    S+ PT+T TG+ S +N
Sbjct: 133 PTLSPSSSPAGSPLGSTDPQPDSPALAPESNTPPLLTPPSPGVTSVTPTTT-TGSRSGVN 192

Query: 187 PSAAMPSLSISPAVLLLSVAVAMMKY 212
           PSAA PS   SPA+LL+++A A +KY
Sbjct: 193 PSAASPSSVFSPALLLVTLASAFLKY 215

[Close]

BLAST of Spo19280.1 vs. NCBI nr
Match: gi|702261376|ref|XP_010034874.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 isoform X1 [Eucalyptus grandis])

HSP 1 Score: 191.8 bits (486), Expect = 1.200e-45
Identity = 116/207 (56.04%), Postives = 152/207 (73.43%), Query Frame = 1


		  
Query: 7   VLVLAASFMVLNIVAYAQIPTSPCTASMLSSFTPCVNYLTNSSGTGSSPTTDCCNSLRNL 66
           +L +A +  +  +    QI T+PCT SM+SSFTPC+N++TNSS  G+SPT+ CC+SL++L
Sbjct: 13  LLAMAIALSITTVPVRGQI-TTPCTPSMISSFTPCLNFVTNSSLNGTSPTSSCCSSLKSL 72

Query: 67  MSNGTDCVCQIVTGGVPFRLPINRTTAISLPRACKQPGVPLQCKASPGAPVPAPGPAAFG 126
            S G  C+C IV GG+PF++PINRT AISLPRAC  P VPLQCKA+ GAP+PAPGPA  G
Sbjct: 73  TSGGMGCLCLIVGGGIPFQMPINRTLAISLPRACNMPSVPLQCKAT-GAPLPAPGPATLG 132

Query: 127 PSASPASSISPSPV--GTVPTSDTPALAPVSDANPTLTPPSTADGSLPPTSTATGAGSSL 186
           P+ SP+SS + SP+   T P  D+PALAP S+  P LTPPS    S+ PT+T TG+ S +
Sbjct: 133 PTLSPSSSPAGSPLAGSTDPQPDSPALAPESNTPPLLTPPSPGVTSVTPTTT-TGSRSGV 192

Query: 187 NPSAAMPSLSISPAVLLLSVAVAMMKY 212
           NPSAA PS   SPA+LL+++A A +KY
Sbjct: 193 NPSAASPSSVFSPALLLVTLASAFLKY 216

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BLAST of Spo19280.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R1X3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_121820 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 4.700e-105
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1


		  
Query: 1   MEMMKGVLVLAASFMVLNIVAYAQIPTSPCTASMLSSFTPCVNYLTNSSGTGSSPTTDCC 60
           MEMMKGVLVLAASFMVLNIVAYAQIPTSPCTASMLSSFTPCVNYLTNSSGTGSSPTTDCC
Sbjct: 1   MEMMKGVLVLAASFMVLNIVAYAQIPTSPCTASMLSSFTPCVNYLTNSSGTGSSPTTDCC 60

Query: 61  NSLRNLMSNGTDCVCQIVTGGVPFRLPINRTTAISLPRACKQPGVPLQCKASPGAPVPAP 120
           NSLRNLMSNGTDCVCQIVTGGVPFRLPINRTTAISLPRACKQPGVPLQCKASPGAPVPAP
Sbjct: 61  NSLRNLMSNGTDCVCQIVTGGVPFRLPINRTTAISLPRACKQPGVPLQCKASPGAPVPAP 120

Query: 121 GPAAFGPSASPASSISPSPVGTVPTSDTPALAPVSDANPTLTPPSTADGSLPPTSTATGA 180
           GPAAFGPSASPASSISPSPVGTVPTSDTPALAPVSDANPTLTPPSTADGSLPPTSTATGA
Sbjct: 121 GPAAFGPSASPASSISPSPVGTVPTSDTPALAPVSDANPTLTPPSTADGSLPPTSTATGA 180

Query: 181 GSSLNPSAAMPSLSISPAVLLLSVAVAMMKYY 213
           GSSLNPSAAMPSLSISPAVLLLSVAVAMMKYY
Sbjct: 181 GSSLNPSAAMPSLSISPAVLLLSVAVAMMKYY 212

[Close]

BLAST of Spo19280.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BC54_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g125200 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 6.000e-76
Identity = 160/208 (76.92%), Postives = 181/208 (87.02%), Query Frame = 1


		  
Query: 6   GVLVLAASFMVLNIVAYAQIPTSPCTASMLSSFTPCVNYLTNSSGTGSSPTTDCCNSLRN 65
           GVL LAA F+VL +  YAQIPTSPCT SM+SSFTPCVNYLTNSSG+GSSPT DCCN+LR+
Sbjct: 8   GVLALAACFIVLTLPGYAQIPTSPCTTSMISSFTPCVNYLTNSSGSGSSPTADCCNALRS 67

Query: 66  LMSNGTDCVCQIVTGGVPFRLPINRTTAISLPRACKQPGVPLQCKASPGAPVPAPGPAAF 125
           LMSNGTDC+CQIVTGGVPFRLPINRT AISLPRAC QPGVP+QC+A+PGAPVPAPGP AF
Sbjct: 68  LMSNGTDCLCQIVTGGVPFRLPINRTMAISLPRACNQPGVPVQCQAAPGAPVPAPGPVAF 127

Query: 126 GPSASPASSISPSP-VGTVPTSDTPALAPVSDANPTLTPPSTADGSLPPTSTATGAGSSL 185
           GPSASPA++ISP P  GT+PTS+TPAL+PVSDANPTLTPPST       TST  GAGSSL
Sbjct: 128 GPSASPAAAISPGPSAGTIPTSETPALSPVSDANPTLTPPST-------TSTTPGAGSSL 187

Query: 186 NPSAAMPSLSISPAVLLLSVAVAMMKYY 213
           +PSAA PSLS SPA+L+ SVA+ +MK +
Sbjct: 188 SPSAARPSLSFSPALLIPSVALMIMKLF 208

[Close]

BLAST of Spo19280.1 vs. UniProtKB/TrEMBL
Match: A0A059D1U1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01055 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.300e-46
Identity = 117/206 (56.80%), Postives = 153/206 (74.27%), Query Frame = 1


		  
Query: 7   VLVLAASFMVLNIVAYAQIPTSPCTASMLSSFTPCVNYLTNSSGTGSSPTTDCCNSLRNL 66
           +L +A +  +  +    QI T+PCT SM+SSFTPC+N++TNSS  G+SPT+ CC+SL++L
Sbjct: 13  LLAMAIALSITTVPVRGQI-TTPCTPSMISSFTPCLNFVTNSSLNGTSPTSSCCSSLKSL 72

Query: 67  MSNGTDCVCQIVTGGVPFRLPINRTTAISLPRACKQPGVPLQCKASPGAPVPAPGPAAFG 126
            S G  C+C IV GG+PF++PINRT AISLPRAC  P VPLQCKA+ GAP+PAPGPA  G
Sbjct: 73  TSGGMGCLCLIVGGGIPFQMPINRTLAISLPRACNMPSVPLQCKAT-GAPLPAPGPATLG 132

Query: 127 PSASPASSISPSPVG-TVPTSDTPALAPVSDANPTLTPPSTADGSLPPTSTATGAGSSLN 186
           P+ SP+SS + SP+G T P  D+PALAP S+  P LTPPS    S+ PT+T TG+ S +N
Sbjct: 133 PTLSPSSSPAGSPLGSTDPQPDSPALAPESNTPPLLTPPSPGVTSVTPTTT-TGSRSGVN 192

Query: 187 PSAAMPSLSISPAVLLLSVAVAMMKY 212
           PSAA PS   SPA+LL+++A A +KY
Sbjct: 193 PSAASPSSVFSPALLLVTLASAFLKY 215

[Close]

BLAST of Spo19280.1 vs. UniProtKB/TrEMBL
Match: W9RZF9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002594 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.200e-45
Identity = 117/210 (55.71%), Postives = 148/210 (70.48%), Query Frame = 1


		  
Query: 7   VLVLAASFMVLNIVAYAQIPTSPCTASMLSSFTPCVNYLTNSSGTGSSPTTDCCNSLRNL 66
           V  L A   VL + A AQI T PC ASM+SSF PC+N++TNSS  G+SPT+DCCN+L+ +
Sbjct: 11  VTALLAVAAVLIMPACAQIST-PCNASMISSFRPCINFVTNSSANGTSPTSDCCNALKTM 70

Query: 67  MSNGTDCVCQIVTGGVPFRLPINRTTAISLPRACKQPGVPLQCKASPGAPVPAPGPAAFG 126
             +G DC+C I TG VPF++PINRT AISLPRAC  PGVP+QCK S GAP+PAPGPA  G
Sbjct: 71  TGSGMDCLCLIATGSVPFQVPINRTLAISLPRACNMPGVPVQCK-STGAPLPAPGPAFLG 130

Query: 127 PSASPASSISPSPVG----TVPTSDTPALAPVSDANPTLTPPSTADGSLPPTSTATGAGS 186
           P+ SP +S S +P       VP   +PAL+P SD  P LTPPST  G+  PT T TG+ S
Sbjct: 131 PTLSPGASPSATPTSPAASAVPDPISPALSPESDTTPLLTPPSTTGGTNTPTET-TGSRS 190

Query: 187 SLNPSAAMPSLSISPAVLLLSVAVAMMKYY 213
           SL PSAA PS  +S +VLLL++  +++ +Y
Sbjct: 191 SLTPSAAAPSYGLSASVLLLAMGGSVIMFY 217

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BLAST of Spo19280.1 vs. UniProtKB/TrEMBL
Match: A0A0B2RPF3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_038612 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 6.000e-44
Identity = 114/215 (53.02%), Postives = 149/215 (69.30%), Query Frame = 1


		  
Query: 1   MEMMKGVLVLAASFMVLNIVAYAQIPTSPCTASMLSS-FTPCVNYLTNSSGTGSSPTTDC 60
           ME    + V+ A  MV+   AYAQI ++PC+ SM++S F PC+N+LTNSS  G+SPT +C
Sbjct: 1   MERFVRLTVVLAMAMVMAAPAYAQISSTPCSTSMINSLFNPCMNFLTNSSANGTSPTAEC 60

Query: 61  CNSLRNLMSNGTDCVCQIVTGGVPFRLPINRTTAISLPRACKQPGVPLQCKASPGAPVPA 120
           CNS+++L S G DC+C I+TG VPFR+PINRT AISLPRAC  P +PLQCK S G+P+PA
Sbjct: 61  CNSIKSLTSGGMDCLCLIITGNVPFRIPINRTLAISLPRACNLPRLPLQCKTSGGSPLPA 120

Query: 121 PGPAAFGPSASP-ASSISPSPVGTVPTSDTPALAPVSDANPTLTPPSTADGSLPPTSTAT 180
           PGPAAFGPS SP A S+SP     +P   +P+LAPVSD  P L         L P+S  T
Sbjct: 121 PGPAAFGPSLSPSAPSLSPEASSVLP---SPSLAPVSDTTPPL---------LTPSSATT 180

Query: 181 GAG-SSLNPSAAMPSLSISPAVLLLSVAVAMMKYY 213
           G+G S L PS+AM S    P+V+L+ +  A++K+Y
Sbjct: 181 GSGRSDLTPSSAMSSYRFLPSVVLIVLGFAVLKHY 203

[Close]

BLAST of Spo19280.1 vs. TAIR (Arabidopsis)
Match: AT3G22620.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 140.2 bits (352), Expect = 1.500e-33
Identity = 98/213 (46.01%), Postives = 131/213 (61.50%), Query Frame = 1


		  
Query: 3   MMKGVLVLAASFMVLNI-VAYAQIPTSPCTASMLSSFTPCVNYLTNSSGTGSSPTTDCCN 62
           M K + ++ A   VL + +   Q P S CT SM+++ +PC+ ++TNSS  G+SP++DCCN
Sbjct: 1   MSKIISLVVAMIAVLALPIRGQQQPLSQCTPSMMTTVSPCMGFITNSSSNGTSPSSDCCN 60

Query: 63  SLRNLMSNGTDCVCQIVTGGVPFRLPINRTTAISLPRACKQPGVPLQCKASPGAPVPAPG 122
           SLR+L + G  C+C IVTG VPF +PINRTTA+SLPRAC  P VPLQC+A+  AP  APG
Sbjct: 61  SLRSLTTGGMGCLCLIVTGTVPFNIPINRTTAVSLPRACNMPRVPLQCQANI-APAAAPG 120

Query: 123 PAA-FGPSASPASSISPSPVGTVPTSDTPALAPVSDANPTLTPPSTADGSLPPTSTATGA 182
           PAA FGPS SP     P     VP     A  P SD     TP  + DG  P   T+   
Sbjct: 121 PAATFGPSMSPGPETDP----IVPEPTPAAQTPQSDTTRPFTP--SVDGGAP---TSDDG 180

Query: 183 GSSLNPSAAMPS-LSISPAVLLLSVAVAMMKYY 213
           GS+  PS    S  ++SP++L  S+A+  +K+Y
Sbjct: 181 GSTSRPSETPSSAYALSPSLLFFSIALVALKFY 203

[Close]

BLAST of Spo19280.1 vs. TAIR (Arabidopsis)
Match: AT1G05450.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 119.4 bits (298), Expect = 2.700e-27
Identity = 89/189 (47.09%), Postives = 115/189 (60.85%), Query Frame = 1


		  
Query: 23  AQIPTSPCTASMLSSFTPCVNYLTNSSGTGSSPTTDCCNSLRNLMSNGTDCVCQIVTGGV 82
           AQI T PC+ SMLSS T C ++LT   G GS PT+DCC +L++L   G DC+C IVT GV
Sbjct: 27  AQINT-PCSPSMLSSVTGCTSFLT---GGGSFPTSDCCGALKSLTGTGMDCLCLIVTAGV 86

Query: 83  PFRLPINRTTAISLPRACKQPGVPLQCKASPGAPVPAPGPAAFGPSASPASSISPSPVGT 142
           P  +PINRT AISLPRAC  PGVP+QCKAS  AP+P PGPA+FGP+ SP  S +  P G+
Sbjct: 87  PISIPINRTLAISLPRACGIPGVPVQCKAS-AAPLPTPGPASFGPTTSPTDSQTSDPEGS 146

Query: 143 VPTSDTPALAPVSDANPTLTPPSTADGSLPPTSTATGAGSSLNPSAAMPSLSISPAVLLL 202
              S  P  +P +   P     S +     P   A    SS +PS+   S S+  + LL 
Sbjct: 147 --ASFRPPTSPTTSQTPNDKDLSGSGNGGDPMGFAPPPPSS-SPSS---SHSLKLSYLLF 204

Query: 203 SVAVAMMKY 212
           + A  ++K+
Sbjct: 207 AFAFTIIKF 204

[Close]

BLAST of Spo19280.1 vs. TAIR (Arabidopsis)
Match: AT2G48140.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 104.0 bits (258), Expect = 1.200e-22
Identity = 90/219 (41.10%), Postives = 123/219 (56.16%), Query Frame = 1


		  
Query: 1   MEMMKGVLVLAASFMVLNIVAYAQIPTSPCTASMLSSFTPCVNYLTNSSGTGSSPTTDCC 60
           ME +  ++V+ +SFM   +    Q  ++PCT+SM+S+FTPC+N++T SSG   +PT  CC
Sbjct: 1   MEGLTLIVVMMSSFM---LGGQGQQISTPCTSSMISTFTPCLNFITGSSGGSVTPTAGCC 60

Query: 61  NSLRNLMSNGTDCVCQIVTGGVPFRLP---INRTTAISLPRACKQPGVPLQCKASPGAPV 120
           +SL+ L + G  C C I+T  VP  LP   INRT A++LPRACK  GVP+QC+A+ G P+
Sbjct: 61  DSLKTLTNTGMGCACLILTANVP--LPTGFINRTLALALPRACKMGGVPIQCQAA-GTPL 120

Query: 121 PAPGP-----------AAFGPSASPASSISPSPVGTVPTSDTPALAPVSDANPTLTPPST 180
           PAPG            +AF P AS A+  +P+     P  DTPA  P        T P+T
Sbjct: 121 PAPGQVPFLIAPPPQVSAFSPGASKAAGTTPT---QAPAPDTPADGP--------TGPTT 180

Query: 181 ADGSLP---PTSTATGAGSSLNPSAAMPSLSISPAVLLL 203
             G  P   P      A SS +P   +P L IS  +L L
Sbjct: 181 KSGIRPVDQPMQPTGLAQSSTSP--FLPLLFISLILLNL 200

[Close]

BLAST of Spo19280.1 vs. TAIR (Arabidopsis)
Match: AT3G22600.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 2.100e-8
Identity = 47/149 (31.54%), Postives = 76/149 (51.01%), Query Frame = 1


		  
Query: 1   MEMMKGVLVLAASFMVLNIVAYAQIPTSPCTASMLSSFTPCVNYLTNSSGTGSSPTTDCC 60
           M+M  G++ L     V++    +    S CT +++S  +PC+NY+T   G  +SP   CC
Sbjct: 1   MKMEMGLVFLTVFMAVMSSTMVSA--QSSCTNALIS-MSPCLNYIT---GNSTSPNQQCC 60

Query: 61  NSLRNLMSNGTDCVCQIVT-GGVPFRLPINRTTAISLPRACKQPGVPL-QCKASPGAPVP 120
           N L  ++ +  DC+CQ++  GG    + +N+T A+ LPRAC     P+ +C    G    
Sbjct: 61  NQLSRVVQSSPDCLCQVLNGGGSQLGINVNQTQALGLPRACNVQTPPVSRCNTGGG---- 120

Query: 121 APGPAAFGPSASPASSISPSPVGTVPTSD 148
             G  +  P+ SP SS   +   TVP  +
Sbjct: 121 GGGSTSDSPAESPNSSGPGNGSKTVPVGE 139

[Close]

BLAST of Spo19280.1 vs. TAIR (Arabidopsis)
Match: AT2G48130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 53.9 bits (128), Expect = 1.400e-7
Identity = 53/147 (36.05%), Postives = 73/147 (49.66%), Query Frame = 1


		  
Query: 26  PTSPCTASMLSSFTPCVNYLTNSSGTGSSPTTDCCNSLRNLMSNGTDCVCQIVTGGVP-F 85
           P+S C  S L++ +PC++Y+T +S T S P   CC+ L +++ +   C+C  V   +P  
Sbjct: 26  PSSSCV-STLTTLSPCLSYITGNSTTPSQP---CCSRLDSVIKSSPQCICSAVNSPIPNI 85

Query: 86  RLPINRTTAISLPRACKQPGVPL-QCKASPGAPVPAPGPAAFGPSASPASSISPSPVGTV 145
            L INRT A+ LP AC     PL QC A       A GP A  P+ SP        V   
Sbjct: 86  GLNINRTQALQLPNACNIQTPPLTQCNA-------ATGPTAQPPAPSPTE--KTPDVTLT 145

Query: 146 PTSDTPALAPVSDANPTLTPPSTADGS 171
           PTS   A + V   + T+  PS   GS
Sbjct: 146 PTSLPGARSGVGGGSKTV--PSVGTGS 157

The following BLAST results are available for this feature:

BLAST of Spo19280.1 vs. NCBI nr
BLAST of Spo19280.1 vs. UniProtKB/TrEMBL
BLAST of Spo19280.1 vs. ExPASy Swiss-Prot
BLAST of Spo19280.1 vs. TAIR (Arabidopsis)

BLAST of Spo19280.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902195721\|gb\|KNA12934.1\|	6.7e-105	100.	hypothetical protein SOVF_1218...	[more]
gi\|731367231\|ref\|XP_010695497.1\|	5.9e-77	77.2	PREDICTED: non-specific lipid-...	[more]
gi\|731367229\|ref\|XP_010695496.1\|	8.6e-76	76.9	PREDICTED: non-specific lipid-...	[more]
gi\|702261379\|ref\|XP_010034882.1\|	1.9e-46	56.8	PREDICTED: non-specific lipid-...	[more]
gi\|702261376\|ref\|XP_010034874.1\|	1.2e-45	56.0	PREDICTED: non-specific lipid-...	[more]

BLAST of Spo19280.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R1X3_SPIOL	4.7e-105	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BC54_BETVU	6.0e-76	76.9	Uncharacterized protein OS=Bet...	[more]
A0A059D1U1_EUCGR	1.3e-46	56.8	Uncharacterized protein OS=Euc...	[more]
W9RZF9_9ROSA	3.2e-45	55.7	Uncharacterized protein OS=Mor...	[more]
A0A0B2RPF3_GLYSO	6.0e-44	53.0	Uncharacterized protein OS=Gly...	[more]

BLAST of Spo19280.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo19280.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT3G22620.1	1.5e-33	46.0	Bifunctional inhibitor/lipid-t...	[more]
AT1G05450.2	2.7e-27	47.0	Bifunctional inhibitor/lipid-t...	[more]
AT2G48140.1	1.2e-22	41.1	Bifunctional inhibitor/lipid-t...	[more]
AT3G22600.1	2.1e-8	31.5	Bifunctional inhibitor/lipid-t...	[more]
AT2G48130.1	1.4e-7	36.0	Bifunctional inhibitor/lipid-t...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 16..109 score: 3.2
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 30..109 score: 1.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 34..108 score: 2.65
None	No IPR available	GENE3D	1.10.110.10		coord: 33..103 score: 9.0
None	No IPR available	PANTHER	PTHR33044	FAMILY NOT NAMED	coord: 1..166 score: 5.1
None	No IPR available	PANTHER	PTHR33044:SF13	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN-LIKE PROTEIN-RELATED	coord: 1..166 score: 5.1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046486	glycerolipid metabolic process
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0016042	lipid catabolic process
biological_process	GO:0008152	metabolic process
biological_process	GO:0015716	organic phosphonate transport
biological_process	GO:0015748	organophosphate ester transport
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane
molecular_function	GO:0004366	glycerol-3-phosphate O-acyltransferase activity
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds
molecular_function	GO:0015416	ATPase-coupled organic phosphonate transmembrane transporter activity
molecular_function	GO:0005524	ATP binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo24296	0.72	Barchart \| Table
Spo15589	0.72	Barchart \| Table
Spo21916	0.70	Barchart \| Table
Spo08107	0.69	Barchart \| Table
Spo00119	0.67	Barchart \| Table
Spo21915	0.67	Barchart \| Table
Spo00496	0.66	Barchart \| Table
Spo02094	0.65	Barchart \| Table