Spo19349 (gene) | SpinachBase

Overview


Name	Spo19349
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Late embryogenesis abundant hydroxyproline-rich glycoprotein
Location	chr6 : 18218986 .. 18219546 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACACCACTCAGCCACAAAAATGGAAGTGGTCTTCCGCCATAGTCGGGGCCACAACAGCAGCGGCTACGGCGGCGCTACTTACCGCGAGGCCACGGGACCCAGCTTTCGAGGTTATCTCCATCGACTTAACAGCCTTCAAGCTGAGCTTCCCCGCCTTAGACGCCGAGCTCATCCTCACCGTTCACGTGAACAACCCCAATATCGCCGCCATCCATTACGACTCCACCACAATGTCAATCTTCTACGACGGCGCACTCCTGGGGTCGGCTATAATGGAAGCAGGTTCTCAGCCGGCTCGGTCATGTCGGCTTATCAAACTCCCGGCTCGGCTGAGTGGGTTGGAGCTGATGGCTAACCACAAGAGCCAATTTATGTCTGACGTGGCGAAGAGAGAAATGGTTATAGATGCTGTTGTGGATGTGAACGGTGCAGCGAAGGTGTTGTGGTGGGAGCATAAGTTTAGGATACACGTGGAAAGCCGGGTGTCCGTTGATCCTGTTTTTCTTGATGTCATTGATCAAGATAATAAATCTCAGATGGATCTTTTTGTTTCTTGA

mRNA sequence

ATGAACACCACTCAGCCACAAAAATGGAAGTGGTCTTCCGCCATAGTCGGGGCCACAACAGCAGCGGCTACGGCGGCGCTACTTACCGCGAGGCCACGGGACCCAGCTTTCGAGGTTATCTCCATCGACTTAACAGCCTTCAAGCTGAGCTTCCCCGCCTTAGACGCCGAGCTCATCCTCACCGTTCACGTGAACAACCCCAATATCGCCGCCATCCATTACGACTCCACCACAATGTCAATCTTCTACGACGGCGCACTCCTGGGGTCGGCTATAATGGAAGCAGGTTCTCAGCCGGCTCGGTCATGTCGGCTTATCAAACTCCCGGCTCGGCTGAGTGGGTTGGAGCTGATGGCTAACCACAAGAGCCAATTTATGTCTGACGTGGCGAAGAGAGAAATGGTTATAGATGCTGTTGTGGATGTGAACGGTGCAGCGAAGGTGTTGTGGTGGGAGCATAAGTTTAGGATACACGTGGAAAGCCGGGTGTCCGTTGATCCTGTTTTTCTTGATGTCATTGATCAAGATAATAAATCTCAGATGGATCTTTTTGTTTCTTGA

Coding sequence (CDS)

ATGAACACCACTCAGCCACAAAAATGGAAGTGGTCTTCCGCCATAGTCGGGGCCACAACAGCAGCGGCTACGGCGGCGCTACTTACCGCGAGGCCACGGGACCCAGCTTTCGAGGTTATCTCCATCGACTTAACAGCCTTCAAGCTGAGCTTCCCCGCCTTAGACGCCGAGCTCATCCTCACCGTTCACGTGAACAACCCCAATATCGCCGCCATCCATTACGACTCCACCACAATGTCAATCTTCTACGACGGCGCACTCCTGGGGTCGGCTATAATGGAAGCAGGTTCTCAGCCGGCTCGGTCATGTCGGCTTATCAAACTCCCGGCTCGGCTGAGTGGGTTGGAGCTGATGGCTAACCACAAGAGCCAATTTATGTCTGACGTGGCGAAGAGAGAAATGGTTATAGATGCTGTTGTGGATGTGAACGGTGCAGCGAAGGTGTTGTGGTGGGAGCATAAGTTTAGGATACACGTGGAAAGCCGGGTGTCCGTTGATCCTGTTTTTCTTGATGTCATTGATCAAGATAATAAATCTCAGATGGATCTTTTTGTTTCTTGA

Protein sequence

MNTTQPQKWKWSSAIVGATTAAATAALLTARPRDPAFEVISIDLTAFKLSFPALDAELILTVHVNNPNIAAIHYDSTTMSIFYDGALLGSAIMEAGSQPARSCRLIKLPARLSGLELMANHKSQFMSDVAKREMVIDAVVDVNGAAKVLWWEHKFRIHVESRVSVDPVFLDVIDQDNKSQMDLFVS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo19349.1	Spo19349.1	mRNA

Homology

[Close]

BLAST of Spo19349.1 vs. NCBI nr
Match: gi|902163522|gb|KNA06838.1| (hypothetical protein SOVF_177290 [Spinacia oleracea])

HSP 1 Score: 363.6 bits (932), Expect = 2.000e-97
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1

		  
Query: 1   MNTTQPQKWKWSSAIVGATTAAATAALLTARPRDPAFEVISIDLTAFKLSFPALDAELIL 60
           MNTTQPQKWKWSSAIVGATTAAATAALLTARPRDPAFEVISIDLTAFKLSFPALDAELIL
Sbjct: 1   MNTTQPQKWKWSSAIVGATTAAATAALLTARPRDPAFEVISIDLTAFKLSFPALDAELIL 60

Query: 61  TVHVNNPNIAAIHYDSTTMSIFYDGALLGSAIMEAGSQPARSCRLIKLPARLSGLELMAN 120
           TVHVNNPNIAAIHYDSTTMSIFYDGALLGSAIMEAGSQPARSCRLIKLPARLSGLELMAN
Sbjct: 61  TVHVNNPNIAAIHYDSTTMSIFYDGALLGSAIMEAGSQPARSCRLIKLPARLSGLELMAN 120

Query: 121 HKSQFMSDVAKREMVIDAVVDVNGAAKVLWWEHKFRIHVESRVSVDPVFLDVIDQDNKSQ 180
           HKSQFMSDVAKREMVIDAVVDVNGAAKVLWWEHKFRIHVESRVSVDPVFLDVIDQDNKSQ
Sbjct: 121 HKSQFMSDVAKREMVIDAVVDVNGAAKVLWWEHKFRIHVESRVSVDPVFLDVIDQDNKSQ 180

Query: 181 MDLFVS 187
           MDLFVS
Sbjct: 181 MDLFVS 186

[Close]

BLAST of Spo19349.1 vs. NCBI nr
Match: gi|731349445|ref|XP_010685995.1| (PREDICTED: uncharacterized protein LOC104900302 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 321.6 bits (823), Expect = 8.900e-85
Identity = 157/186 (84.41%), Postives = 178/186 (95.70%), Query Frame = 1

		  
Query: 1   MNTTQPQKWKWSSAIVGATTAAATAALLTARPRDPAFEVISIDLTAFKLSFPALDAELIL 60
           M TT+PQKW WSSAI+GATTAA TAAL+TA+P+DPAFEVISIDLT+FKL+FPALDAELIL
Sbjct: 1   MTTTKPQKWSWSSAIIGATTAATTAALITAKPKDPAFEVISIDLTSFKLNFPALDAELIL 60

Query: 61  TVHVNNPNIAAIHYDSTTMSIFYDGALLGSAIMEAGSQPARSCRLIKLPARLSGLELMAN 120
           TVHVNNPNI AI+YD+TTMSIFYDG+LLG+A +EAGSQPARSCRL++LPARLSGLEL+A+
Sbjct: 61  TVHVNNPNIVAINYDTTTMSIFYDGSLLGTARLEAGSQPARSCRLVRLPARLSGLELVAH 120

Query: 121 HKSQFMSDVAKREMVIDAVVDVNGAAKVLWWEHKFRIHVESRVSVDPVFLDVIDQDNKSQ 180
           H S+FMSDVAKREMVIDAVVDV G AKVLWWEHKFR+HV+SRVSVDPVFLDVIDQDN+SQ
Sbjct: 121 HVSRFMSDVAKREMVIDAVVDVEGVAKVLWWEHKFRVHVDSRVSVDPVFLDVIDQDNRSQ 180

Query: 181 MDLFVS 187
           M+LFVS
Sbjct: 181 MELFVS 186

[Close]

BLAST of Spo19349.1 vs. NCBI nr
Match: gi|255565669|ref|XP_002523824.1| (PREDICTED: uncharacterized protein LOC8271936 [Ricinus communis])

HSP 1 Score: 259.2 bits (661), Expect = 5.400e-66
Identity = 122/184 (66.30%), Postives = 157/184 (85.33%), Query Frame = 1

		  
Query: 3   TTQPQKWKWSSAIVGATTAAATAALLTARPRDPAFEVISIDLTAFKLSFPALDAELILTV 62
           T++  KW WSSA++GA +A A  ALL A+P+DP F +ISI  T+FKL+ P LDA+L+LTV
Sbjct: 2   TSKKVKWSWSSALIGAASATAVTALLNAKPKDPTFHLISISFTSFKLNLPVLDADLLLTV 61

Query: 63  HVNNPNIAAIHYDSTTMSIFYDGALLGSAIMEAGSQPARSCRLIKLPARLSGLELMANHK 122
           HV NPNI +IHY ST+MSIFYDG+LLGSA +EAGSQPARSC+L++L ARL GL+L A+H 
Sbjct: 62  HVTNPNITSIHYSSTSMSIFYDGSLLGSAQVEAGSQPARSCKLLRLQARLDGLQL-AHHA 121

Query: 123 SQFMSDVAKREMVIDAVVDVNGAAKVLWWEHKFRIHVESRVSVDPVFLDVIDQDNKSQMD 182
           S+F SDVAKR+M++DA VD+ GAAKVLWW+HKF++HV+S  +VDPVFLDVIDQ+NKSQ+D
Sbjct: 122 SKFFSDVAKRQMLLDAKVDIEGAAKVLWWDHKFKVHVDSHTTVDPVFLDVIDQENKSQLD 181

Query: 183 LFVS 187
           +FV+
Sbjct: 182 VFVA 184

[Close]

BLAST of Spo19349.1 vs. NCBI nr
Match: gi|802621751|ref|XP_012076121.1| (PREDICTED: uncharacterized protein LOC105637298 [Jatropha curcas])

HSP 1 Score: 258.1 bits (658), Expect = 1.200e-65
Identity = 123/179 (68.72%), Postives = 155/179 (86.59%), Query Frame = 1

		  
Query: 8   KWKWSSAIVGATTAAATAALLTARPRDPAFEVISIDLTAFKLSFPALDAELILTVHVNNP 67
           KW WSSA +GA +A A  ALL A+P+DP F++ISI+LT+FK + P LDAEL+LTVHVNNP
Sbjct: 6   KWSWSSAFIGAASATAVTALLNAKPKDPVFQLISINLTSFKFNLPVLDAELVLTVHVNNP 65

Query: 68  NIAAIHYDSTTMSIFYDGALLGSAIMEAGSQPARSCRLIKLPARLSGLELMANHKSQFMS 127
           NIA+IHY STTMSI YDG+LLGSA +EA SQP RSC+L++L ARL GL+L A+H S+F  
Sbjct: 66  NIASIHYSSTTMSIHYDGSLLGSAQVEADSQPPRSCKLLRLQARLDGLQL-AHHASKFFY 125

Query: 128 DVAKREMVIDAVVDVNGAAKVLWWEHKFRIHVESRVSVDPVFLDVIDQDNKSQMDLFVS 187
           DVAKREMV+DA VD+ GAAKVLWW+HKF++HV+SRV+VDP+FLDVIDQ+NKSQ+++FV+
Sbjct: 126 DVAKREMVLDATVDIVGAAKVLWWDHKFKVHVDSRVTVDPLFLDVIDQENKSQLNVFVA 183

[Close]

BLAST of Spo19349.1 vs. NCBI nr
Match: gi|590586734|ref|XP_007015786.1| (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Theobroma cacao])

HSP 1 Score: 255.0 bits (650), Expect = 1.000e-64
Identity = 120/179 (67.04%), Postives = 153/179 (85.47%), Query Frame = 1

		  
Query: 8   KWKWSSAIVGATTAAATAALLTARPRDPAFEVISIDLTAFKLSFPALDAELILTVHVNNP 67
           KW W+SA +GA +A A AALL+A+P+DP F +ISI+LT+FKL  P +DAELILTVHV NP
Sbjct: 6   KWSWTSAFIGAASATAVAALLSAKPKDPTFHLISINLTSFKLKLPHIDAELILTVHVTNP 65

Query: 68  NIAAIHYDSTTMSIFYDGALLGSAIMEAGSQPARSCRLIKLPARLSGLELMANHKSQFMS 127
           NIA +HY STTMSIFY+G+LLG+A ++AGSQP RSC+L+KLP RL G+EL A+H  +F +
Sbjct: 66  NIAPVHYSSTTMSIFYEGSLLGAAQVKAGSQPPRSCQLLKLPTRLDGVEL-AHHAGKFFA 125

Query: 128 DVAKREMVIDAVVDVNGAAKVLWWEHKFRIHVESRVSVDPVFLDVIDQDNKSQMDLFVS 187
           DVAKREM++DA VD+ G AKVLWW+HKF +HV+S V+VDPVFLDVIDQ+NKSQ++LFV+
Sbjct: 126 DVAKREMLLDAKVDIGGKAKVLWWDHKFNVHVDSHVTVDPVFLDVIDQENKSQLELFVA 183

[Close]

BLAST of Spo19349.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJG7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_177290 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 1.400e-97
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1

		  
Query: 1   MNTTQPQKWKWSSAIVGATTAAATAALLTARPRDPAFEVISIDLTAFKLSFPALDAELIL 60
           MNTTQPQKWKWSSAIVGATTAAATAALLTARPRDPAFEVISIDLTAFKLSFPALDAELIL
Sbjct: 1   MNTTQPQKWKWSSAIVGATTAAATAALLTARPRDPAFEVISIDLTAFKLSFPALDAELIL 60

Query: 61  TVHVNNPNIAAIHYDSTTMSIFYDGALLGSAIMEAGSQPARSCRLIKLPARLSGLELMAN 120
           TVHVNNPNIAAIHYDSTTMSIFYDGALLGSAIMEAGSQPARSCRLIKLPARLSGLELMAN
Sbjct: 61  TVHVNNPNIAAIHYDSTTMSIFYDGALLGSAIMEAGSQPARSCRLIKLPARLSGLELMAN 120

Query: 121 HKSQFMSDVAKREMVIDAVVDVNGAAKVLWWEHKFRIHVESRVSVDPVFLDVIDQDNKSQ 180
           HKSQFMSDVAKREMVIDAVVDVNGAAKVLWWEHKFRIHVESRVSVDPVFLDVIDQDNKSQ
Sbjct: 121 HKSQFMSDVAKREMVIDAVVDVNGAAKVLWWEHKFRIHVESRVSVDPVFLDVIDQDNKSQ 180

Query: 181 MDLFVS 187
           MDLFVS
Sbjct: 181 MDLFVS 186

[Close]

BLAST of Spo19349.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BZL7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g175950 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 6.200e-85
Identity = 157/186 (84.41%), Postives = 178/186 (95.70%), Query Frame = 1

		  
Query: 1   MNTTQPQKWKWSSAIVGATTAAATAALLTARPRDPAFEVISIDLTAFKLSFPALDAELIL 60
           M TT+PQKW WSSAI+GATTAA TAAL+TA+P+DPAFEVISIDLT+FKL+FPALDAELIL
Sbjct: 1   MTTTKPQKWSWSSAIIGATTAATTAALITAKPKDPAFEVISIDLTSFKLNFPALDAELIL 60

Query: 61  TVHVNNPNIAAIHYDSTTMSIFYDGALLGSAIMEAGSQPARSCRLIKLPARLSGLELMAN 120
           TVHVNNPNI AI+YD+TTMSIFYDG+LLG+A +EAGSQPARSCRL++LPARLSGLEL+A+
Sbjct: 61  TVHVNNPNIVAINYDTTTMSIFYDGSLLGTARLEAGSQPARSCRLVRLPARLSGLELVAH 120

Query: 121 HKSQFMSDVAKREMVIDAVVDVNGAAKVLWWEHKFRIHVESRVSVDPVFLDVIDQDNKSQ 180
           H S+FMSDVAKREMVIDAVVDV G AKVLWWEHKFR+HV+SRVSVDPVFLDVIDQDN+SQ
Sbjct: 121 HVSRFMSDVAKREMVIDAVVDVEGVAKVLWWEHKFRVHVDSRVSVDPVFLDVIDQDNRSQ 180

Query: 181 MDLFVS 187
           M+LFVS
Sbjct: 181 MELFVS 186

[Close]

BLAST of Spo19349.1 vs. UniProtKB/TrEMBL
Match: B9SCV5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1281780 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 3.800e-66
Identity = 122/184 (66.30%), Postives = 157/184 (85.33%), Query Frame = 1

		  
Query: 3   TTQPQKWKWSSAIVGATTAAATAALLTARPRDPAFEVISIDLTAFKLSFPALDAELILTV 62
           T++  KW WSSA++GA +A A  ALL A+P+DP F +ISI  T+FKL+ P LDA+L+LTV
Sbjct: 2   TSKKVKWSWSSALIGAASATAVTALLNAKPKDPTFHLISISFTSFKLNLPVLDADLLLTV 61

Query: 63  HVNNPNIAAIHYDSTTMSIFYDGALLGSAIMEAGSQPARSCRLIKLPARLSGLELMANHK 122
           HV NPNI +IHY ST+MSIFYDG+LLGSA +EAGSQPARSC+L++L ARL GL+L A+H 
Sbjct: 62  HVTNPNITSIHYSSTSMSIFYDGSLLGSAQVEAGSQPARSCKLLRLQARLDGLQL-AHHA 121

Query: 123 SQFMSDVAKREMVIDAVVDVNGAAKVLWWEHKFRIHVESRVSVDPVFLDVIDQDNKSQMD 182
           S+F SDVAKR+M++DA VD+ GAAKVLWW+HKF++HV+S  +VDPVFLDVIDQ+NKSQ+D
Sbjct: 122 SKFFSDVAKRQMLLDAKVDIEGAAKVLWWDHKFKVHVDSHTTVDPVFLDVIDQENKSQLD 181

Query: 183 LFVS 187
           +FV+
Sbjct: 182 VFVA 184

[Close]

BLAST of Spo19349.1 vs. UniProtKB/TrEMBL
Match: A0A067KHC8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12694 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 8.400e-66
Identity = 123/179 (68.72%), Postives = 155/179 (86.59%), Query Frame = 1

		  
Query: 8   KWKWSSAIVGATTAAATAALLTARPRDPAFEVISIDLTAFKLSFPALDAELILTVHVNNP 67
           KW WSSA +GA +A A  ALL A+P+DP F++ISI+LT+FK + P LDAEL+LTVHVNNP
Sbjct: 6   KWSWSSAFIGAASATAVTALLNAKPKDPVFQLISINLTSFKFNLPVLDAELVLTVHVNNP 65

Query: 68  NIAAIHYDSTTMSIFYDGALLGSAIMEAGSQPARSCRLIKLPARLSGLELMANHKSQFMS 127
           NIA+IHY STTMSI YDG+LLGSA +EA SQP RSC+L++L ARL GL+L A+H S+F  
Sbjct: 66  NIASIHYSSTTMSIHYDGSLLGSAQVEADSQPPRSCKLLRLQARLDGLQL-AHHASKFFY 125

Query: 128 DVAKREMVIDAVVDVNGAAKVLWWEHKFRIHVESRVSVDPVFLDVIDQDNKSQMDLFVS 187
           DVAKREMV+DA VD+ GAAKVLWW+HKF++HV+SRV+VDP+FLDVIDQ+NKSQ+++FV+
Sbjct: 126 DVAKREMVLDATVDIVGAAKVLWWDHKFKVHVDSRVTVDPLFLDVIDQENKSQLNVFVA 183

[Close]

BLAST of Spo19349.1 vs. UniProtKB/TrEMBL
Match: A0A061GU68_THECC (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family OS=Theobroma cacao GN=TCM_041382 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 7.100e-65
Identity = 120/179 (67.04%), Postives = 153/179 (85.47%), Query Frame = 1

		  
Query: 8   KWKWSSAIVGATTAAATAALLTARPRDPAFEVISIDLTAFKLSFPALDAELILTVHVNNP 67
           KW W+SA +GA +A A AALL+A+P+DP F +ISI+LT+FKL  P +DAELILTVHV NP
Sbjct: 6   KWSWTSAFIGAASATAVAALLSAKPKDPTFHLISINLTSFKLKLPHIDAELILTVHVTNP 65

Query: 68  NIAAIHYDSTTMSIFYDGALLGSAIMEAGSQPARSCRLIKLPARLSGLELMANHKSQFMS 127
           NIA +HY STTMSIFY+G+LLG+A ++AGSQP RSC+L+KLP RL G+EL A+H  +F +
Sbjct: 66  NIAPVHYSSTTMSIFYEGSLLGAAQVKAGSQPPRSCQLLKLPTRLDGVEL-AHHAGKFFA 125

Query: 128 DVAKREMVIDAVVDVNGAAKVLWWEHKFRIHVESRVSVDPVFLDVIDQDNKSQMDLFVS 187
           DVAKREM++DA VD+ G AKVLWW+HKF +HV+S V+VDPVFLDVIDQ+NKSQ++LFV+
Sbjct: 126 DVAKREMLLDAKVDIGGKAKVLWWDHKFNVHVDSHVTVDPVFLDVIDQENKSQLELFVA 183

[Close]

BLAST of Spo19349.1 vs. TAIR (Arabidopsis)
Match: AT3G44380.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 250.4 bits (638), Expect = 8.900e-67
Identity = 121/182 (66.48%), Postives = 151/182 (82.97%), Query Frame = 1

		  
Query: 5   QPQKWKWSSAIVGATTAAATAALLTARPRDPAFEVISIDLTAFKLSFPALDAELILTVHV 64
           Q  KW WSSA++GA +A A A+LL+A+P+DP F +ISIDLT+ KL+ P LDAEL+LTVHV
Sbjct: 6   QKVKWSWSSALIGAASATAAASLLSAKPKDPTFHLISIDLTSLKLNLPVLDAELMLTVHV 65

Query: 65  NNPNIAAIHYDSTTMSIFYDGALLGSAIMEAGSQPARSCRLIKLPARLSGLELMANHKSQ 124
            NPNIAAIHY ST M+I YDG +LGSA ++AGSQPARSC+L++LPARL G+EL A H  Q
Sbjct: 66  TNPNIAAIHYSSTKMTILYDGTVLGSAEVKAGSQPARSCQLLRLPARLDGMEL-AQHARQ 125

Query: 125 FMSDVAKREMVIDAVVDVNGAAKVLWWEHKFRIHVESRVSVDPVFLDVIDQDNKSQMDLF 184
           F SDVA REM ++A + + GAAKVLWW+H FR+HV+S V+VDPVFLDVI Q+NKSQMDLF
Sbjct: 126 FFSDVANREMKLEAKLTIEGAAKVLWWDHSFRVHVDSFVTVDPVFLDVIGQENKSQMDLF 185

Query: 185 VS 187
           ++
Sbjct: 186 LT 186

The following BLAST results are available for this feature:

BLAST of Spo19349.1 vs. NCBI nr
BLAST of Spo19349.1 vs. UniProtKB/TrEMBL
BLAST of Spo19349.1 vs. ExPASy Swiss-Prot
BLAST of Spo19349.1 vs. TAIR (Arabidopsis)

BLAST of Spo19349.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902163522\|gb\|KNA06838.1\|	2.0e-97	100.	hypothetical protein SOVF_1772...	[more]
gi\|731349445\|ref\|XP_010685995.1\|	8.9e-85	84.4	PREDICTED: uncharacterized pro...	[more]
gi\|255565669\|ref\|XP_002523824.1\|	5.4e-66	66.3	PREDICTED: uncharacterized pro...	[more]
gi\|802621751\|ref\|XP_012076121.1\|	1.2e-65	68.7	PREDICTED: uncharacterized pro...	[more]
gi\|590586734\|ref\|XP_007015786.1\|	1.0e-64	67.0	Late embryogenesis abundant (L...	[more]

BLAST of Spo19349.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9QJG7_SPIOL	1.4e-97	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BZL7_BETVU	6.2e-85	84.4	Uncharacterized protein OS=Bet...	[more]
B9SCV5_RICCO	3.8e-66	66.3	Putative uncharacterized prote...	[more]
A0A067KHC8_JATCU	8.4e-66	68.7	Uncharacterized protein OS=Jat...	[more]
A0A061GU68_THECC	7.1e-65	67.0	Late embryogenesis abundant (L...	[more]

BLAST of Spo19349.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo19349.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

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x 1


Match Name	E-value	Identity	Description
AT3G44380.1	8.9e-67	66.4	Late embryogenesis abundant (L...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 61..162 score: 5.9
IPR013990	Water stress and hypersensitive response domain	SMART	SM00769	why	coord: 42..156 score: 1.
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 11..185 score: 2.7
None	No IPR available	PANTHER	PTHR31852:SF7	LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN	coord: 11..185 score: 2.7
None	No IPR available	unknown	SSF117070	LEA14-like	coord: 22..164 score: 1.44

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009269	response to desiccation
biological_process	GO:0009853	photorespiration
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0006744	ubiquinone biosynthetic process
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo16694	0.71	Barchart \| Table
Spo01546	0.67	Barchart \| Table
Spo21430	0.67	Barchart \| Table
Spo15902	0.66	Barchart \| Table
Spo16692	0.66	Barchart \| Table
Spo24867	0.66	Barchart \| Table
Spo26994	0.66	Barchart \| Table