Spo19370 (gene) | SpinachBase

Overview


Name	Spo19370
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	RING zinc finger family protein
Location	Super_scaffold_133 : 1340937 .. 1346923 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCTTTGTCACAACTAATTCGCACCGGGGGAAAAAAGAATTTACTCGAAGAAAGGGAGTTCTGTTGGGAAAAGCCATTGAAGCAAAGAGATGGAGCAGGAAGAAGCCATGAAAGACGACGAAGAAGGAGGCAGTCCCTGTATCCCGAACCTGAACCCGAACCCATGCCCGATCTGTCTCGGACTCCTTTCTCAAGACTCCTATCTAGATCAATGCTTCCGTATGCCTCTCCAACTCAATCTTCTCTTCAAATTCTGCATAATTTCGTAATTAAATTCGTTATATTACTGGTTAATTAACTTGGTGTTAGTTTTGTTGTGAATTTGCAGATACATTTTGCTACAAATGCATTGTTCGTTGGACTCAAGTGGTTTCAAGCAGGTCGTCTTCTTTGCGCCAATCATCCTCCGTCAAGTGTCCTTTATGCAAGGTACTTATTCATCAATTTATCTTCCTTCACTTTGCTATTATTATTTCTTAATTAAATTGGGGAAGATAATTATTTATTTGGGACTCGGTCTTTATGTTTTCATCTAGGGTTTTACTGCTTCAAAAAGTATCGCGCGCACTAGGTGTACAATAAATTTATTGTACACCAAAATAACTTTAACCCATTTTTTTGTAACTTTAACCTATTTTTGATTAACTTTTATATTAGTAAAAAAAGTTGATAGATAAACATTTTAAAGGATTAAATGATTAATTTTATACATTATTAGAGATTTTGAAGAAATAAGTTTTATTAAAATGAAAAAATTTATCACTAAAAAATAGATAACTTTTACCTATATAAGCATAACTTTTAAGCATTTTGAGTTAACTTTTACTCCGTTATACAATAATTATTGTACAACCATTGTAAATAAGAATTTGTGTTCCCACGGAACAAGCCCTTACCTTTCTTCAGTGTAATATCTCTTCCTGAATGCTCATACTTAGGAGATGCATGTTGCCATCGAAGTAGTTTGAGCTTTAAATTATCACCATTTCCAATCACAATCCTGTTTTCCTTTTGAGTAAGCCGTCTTGGATGCTAAAATTAGGCACAAGTACACTATCTTGTAATTGTTCCTAGATGTTATTAGTATTGACATCTAGTTGATAGCTATTTCTGATCATGTCTTTCAAATCTGAAGAGACCACAAAGATAGCCATAAACAGGATCTCTGAACCTTGAACACTAGAGAGGGCATCAACAACTACATTTTCTTCGCACTCTTGTACTGAATTTTATAGTCAACTCCCATGAGTTTTGACAACCAAAACTGTTGAAATGATGGAGTTGATATCTTCTGTTGTAGCAACCACTTTAAACTTTTCTGATTAGTTCTGACTATAAAGTAGTATTGTTCCCACTCTGAACAACAAAAACAATAGCTATCAGCTCCTTTTCATAGACTGACCATTTCTGCCATCTAGGACCTAGAGATCTGCTAATAAAAGCCAAGGGGTGGTTTCTTGCATTAGGACTGCACCTATTCCAAACTTAGATACATCAATTTCCAAAACAAAAGGTTTCGTAAAATCTGGAGCAGCTAGAACTGGTGCAGTAGTCAGGGCAGTATTCAGTGAAGGCCTCCTTGTGCTTTCTGATTCCAACAAATTCCCCTTATCTTGAGAAGGTTAGTTAACTCTTTACTAATAATGGTGTAGTTCCTTACAAACTTCCTGTAATACCAAACTTCTCAAATCTTTTAAGGTACTAGGAATATGCCAACTTAAAATTGCTAAAACTTGCTTTGGATCAGGCTTAACCCCTTTTGCTTATATGAAATCCCTTAAATATTCCACTTTTTCAGTAGTAAAAGTACATGTACCAGCGTTTGCATACATCTGATTCTTCTGCATAAGCTCAAACATCACAGGGGTGTTGTAAATGGTCTTCACTGTCTTTACTGTAAACCATAATATCATCAAAGAACACCAAGACACACTTTCTGAGTAAGGGTCTAAAAACATCATTCTTCCACCCTTGGAAAGATGCAGGTGCATTGGTAAGACAAAAAATGCATTACGAGAAACTCATATCCAGTGTGAGTATTAAATGCAATTTTTGAAAACATCGCCCTCGTGTACCCTTAACTGATATATCCAGCCCTCAAATCAAGTTTAGTAAAGACAGCCCCAACCAATTCATCAATGAAATCATCAATAACAGGAATGTGGAACTTAGAGTTTCCTCACTAGAATAACATGAGATGCAAAAGGGCTGCATTTCTGGATAATTCCTTTTCACCATCTCTTGTATCAATAGTTCTATGACATCCCTTTGTTTGACTGTATATCTGCAAGGTCTAATGTTAACAGGACCTTAACCCATCTCTAATGGAATTCTATGATCCAGCACACCTCTATGAGGGGGTAGATCTACAGGATCTTCAAAAACCTTACCATACTTCTGTTTAAGAGTCTCCATTGGAGTCTCTATTGGGACCTGCCCGGTAATGTACAAAGTTCACACAAGGCTCACAGGCGCAATTAAGACCAGTAATCAATGATGGACGGGGGTAAAAACTCTATATAAAGTGGATACATCAGATCCCAATTGGTGATTTTTTGTAAAACTTAGACCCCAATAATGGGCTTAACTCCATTTATATCAAACAGTTGGAATGCAACTCATTTGAAGCTCCAACATTTGTGGATTAAGAGATTCCTAGCAGCAGCTGCTTGGTTTTGCTCTGATACCACTGATACAGGGAAAGCAACCTTCCTGTATAGCTAAGATATGGGATAGAATTTCAAGAATTCTGACAACAGTAATATAGAAAGAGAGAGAGAACATGAGATGAGAAAGAATGATCTTTGGAGTTATTATTGAATGAATGATTACATCCTATACTTAGTCTATTTATAGCCTGCTTGCTAAGAACATATGCTGACAGAAATGGACAGCAGCTAAATGATCACAACTAAACTCTAACAGATTCCCTTCAAATCAGGAAGCTAACTAACAGCTAACTAACTAATTCTCCGGCCAAATGCAAGCAACTTCTGAATTGTAGCATGATTGAGGCTAATTAACACAATTACCCTTATCAGATTTGGGGATTAATTCTAGTATAAGATTGTGATTAAGAGTGATCAGTGTCTGTTTTATTGCGAAAAATAGCTTAGTTTTGAATACTGTATTACTAAAAACTGCTGGATTGATTTTTTGGGATGGGTGACGTAATCCCAATACTCCATGTAATTGTATCGGTGGTGAAAATTAATCCGTAACAAGTAAGTATGGTGGTTTACTTTAATTACATAAACCAACCCATGTCGACGTGGTCTTCGGAGATTCTTGATTCTGAATGATCCATGAGAAGATGTTTTCGAAAAGGGCGATTAATAGGAAGTTATGGACTTGAGTTTGAGTCTCTCTATGATTTCCACTCCCTTCTAAGAGCATGTTTGTTATAGCAGTTTGGAAAATTTGCCAATTACTACCTAGCTTGTTTGTTAGTTTGCGAATTACTACCTATATATTTAAAAGTTGTCAATTACTACCTACATCTTTAACAGTTGATGGCAATTACTACCTAGGTGTCATAAAATCTATTTTCTAACTAATTAATTAACTAATTATATATTAGTCACCCTAATTATATATATTAATCCTTTTAATTAATAAATTGAAACCTAAAACAAAAAAATCCCCACCCAAAACTTAAAAAAAGAAAAAAACCCGATTGTTCTGCTAATAGATCGAGTTCGGTGTTCGTCGTTCATCCTCTCTTCATACTCTTCATCGTCTCCTTCTTCCTCGAGACTTTGACGTTGCTCCACTCTTCAATTCTACTCGATTTCTTCCCTTCTGCTCAAGTTTTGCTATAAAGCCTAAAATTATCATCCCTTTTATTTTGCCTAGCCTCAGTCTTCTTGCTCCTTCTCCCTATCGAACGACCAAAATTCCATTCTTGTTCGTGCTACTGGTATTACCTTTCCAGTTCTCCGGAAAACAACATTTTGTGGACACCAATTTTGTTAAGGTGTGCCCGATTTTCTGCAACTGTTAATTTCGTAAATAAGGGTTCTTATTTCAATCAAATTGGGGGTTTTGGGGAAGTTTGGGGCTTTTAAGTATTTTGGTCAATTAAGGAGGTAATTAAACACTTTGGGTATATAGGGGTATGCTTAATTTAGGGGACCATTTTTTAGCCAATGTAGAAGAACTTAGCAGAAGGGAATTGAAGAGCAGACATTTTCCAGCTTCATTTTTTTCCAGCTTTGTTCGAGGAAGGAGGAGTACACGACAACAACAAGAATTTTTTGGGTGGGGTTAACTTTTTGGGTAATATGTGATATTATTTTTTTAAAATAATTATTAATTAAAATAATTAATATGTAATTAGCTTGATTAATATATAATTGGTTATAAAATATATTAAATGACAACTAGGTAGTAAATTGCATCAATTGTCAAAGATGTAGGTAGTAATTGACAACTTTTAAAGATGTAGGTAGTAATTCACAAACTCCCAAACAAGCAAGGTAGTAATTGGCAAATTTTCCTAGCAGTTTTAAGTGGTAATACAATGCATTTGTTACCCTTCCCAACTCTATGGTAACATAATTGTTACCCTCCTGTCCTTAATCCCCAAATTTACGCAAGTGATTTCTTTTCTAAGTTATACGGAACAACTAATAATGGTAACTGTTAATAATACCGTTTTCCTTCTTATTTGTTTCCCATTTTCTCATACGAAACATGCACTAAGTGTTTCAGGGAACACTTCCTCTTTTGAAGAGGCTATCATACTAATGTGCTCTGAAGTTGTCATGCGGTTTTACAATTTGAGTTTTGACTTTATAGTAATACGTAGTAGTTGTTTTATTTGCTCACATATTTGCTTGGTCATTCTTTATTAAATTTTCACTCCTGCTGATCATGTTTTCTTGACAATTGGTGGATAACTGGATATTATTGATTTTGCAGACTGAAAACTTTTCTATCATTTATGGGTATGATGGAATTACATTTCAACAGCATTTCATCAACCAAAATAATGGTAATAGGTATCAGAGACAGGTTGCTTTATATTGACTTTCTAATATGTCTGACTCTTTGAAGGAAGTAATTTGCTATTTATCTTTACTTATTCTAGTTTCTCAACGCATATGCAGTACTTTCTTTTCAAAGGATCACAAGTATAGATTACAATGTTACTACACCGAACCAGAATCAGGTCTTTTAAGTGATGCATTTAAAGTTGAGCGCTATTGGAAGTTGCACAAGTATCTTCAACCGAACAGCTGGCTTGAAAAGTGGTTGAAAAGGGAGTTACAAGCTCTGTTACAGGTCTCTTATTCTCGTCTTTCTTATGCGTTACAGAGTAGTTCTAAGCTGTCTGCTGGAATATTTATTTATTCCTGATATTTTGCTTTCTTTGCTGTTATGAAGTTTTTTTTGTGTGTGCATGTACTTGCATTCAGCTAAAAGTTATCCAATTGGCTGTTCCTTGTAGGAAGAAGATGTTGAAATCATTATGCATCACATACTTGGGGTGATTCACTCATTTTCAAGAAGGTAACTTATAGTAATCTTCAATAATTTTTCAGGTGCAATTCAGTAAATAAGGTGCATAATTTCTAGCTATAGCCGTCTTGCCAATATACGGAATAATACAGATTAGTTAACTGACTACTTATGCAACTAACATGCATATGTTTACTTGTTCAGCTATCACCTCAAAGGAAAAACACATCCCCTGCATCGAACACAGGAAGAATTTAAGGTTTTGGTTGCTGATGCTGCAATGCCTTTCCTTACGGCTAGAACCAAGCGGTTTGTGGACGAGGTTGAATTATTTCTCGCCTCAGGTTTAACTGTCGAGGCCTTTGATAAAGCTTATAGAAGGTGTTTAGGTTGGAAGAAATCTGAGGAAACCTCAGAGGATAATGAACGAACTAGCACGGAGTGTGAGCCAATAGCTCCTTGCCTATATTTTATTGATGATGACTCAGATGAGGTTGACTGGACAGAAGATAAACTTGCATAG

mRNA sequence

CACCTTTGTCACAACTAATTCGCACCGGGGGAAAAAAGAATTTACTCGAAGAAAGGGAGTTCTGTTGGGAAAAGCCATTGAAGCAAAGAGATGGAGCAGGAAGAAGCCATGAAAGACGACGAAGAAGGAGGCAGTCCCTGTATCCCGAACCTGAACCCGAACCCATGCCCGATCTGTCTCGGACTCCTTTCTCAAGACTCCTATCTAGATCAATGCTTCCATACATTTTGCTACAAATGCATTGTTCGTTGGACTCAAGTGGTTTCAAGCAGGTCGTCTTCTTTGCGCCAATCATCCTCCGTCAAGTGTCCTTTATGCAAGACTGAAAACTTTTCTATCATTTATGGGTATGATGGAATTACATTTCAACAGCATTTCATCAACCAAAATAATGGTAATAGTACTTTCTTTTCAAAGGATCACAAGTATAGATTACAATGTTACTACACCGAACCAGAATCAGGTCTTTTAAGTGATGCATTTAAAGTTGAGCGCTATTGGAAGTTGCACAAGTATCTTCAACCGAACAGCTGGCTTGAAAAGTGGTTGAAAAGGGAGTTACAAGCTCTGTTACAGGAAGAAGATGTTGAAATCATTATGCATCACATACTTGGGGTGATTCACTCATTTTCAAGAAGCTATCACCTCAAAGGAAAAACACATCCCCTGCATCGAACACAGGAAGAATTTAAGGTTTTGGTTGCTGATGCTGCAATGCCTTTCCTTACGGCTAGAACCAAGCGGTTTGTGGACGAGGTTGAATTATTTCTCGCCTCAGGTTTAACTGTCGAGGCCTTTGATAAAGCTTATAGAAGGTGTTTAGGTTGGAAGAAATCTGAGGAAACCTCAGAGGATAATGAACGAACTAGCACGGAGTGTGAGCCAATAGCTCCTTGCCTATATTTTATTGATGATGACTCAGATGAGGTTGACTGGACAGAAGATAAACTTGCATAG

Coding sequence (CDS)

ATGGAGCAGGAAGAAGCCATGAAAGACGACGAAGAAGGAGGCAGTCCCTGTATCCCGAACCTGAACCCGAACCCATGCCCGATCTGTCTCGGACTCCTTTCTCAAGACTCCTATCTAGATCAATGCTTCCATACATTTTGCTACAAATGCATTGTTCGTTGGACTCAAGTGGTTTCAAGCAGGTCGTCTTCTTTGCGCCAATCATCCTCCGTCAAGTGTCCTTTATGCAAGACTGAAAACTTTTCTATCATTTATGGGTATGATGGAATTACATTTCAACAGCATTTCATCAACCAAAATAATGGTAATAGTACTTTCTTTTCAAAGGATCACAAGTATAGATTACAATGTTACTACACCGAACCAGAATCAGGTCTTTTAAGTGATGCATTTAAAGTTGAGCGCTATTGGAAGTTGCACAAGTATCTTCAACCGAACAGCTGGCTTGAAAAGTGGTTGAAAAGGGAGTTACAAGCTCTGTTACAGGAAGAAGATGTTGAAATCATTATGCATCACATACTTGGGGTGATTCACTCATTTTCAAGAAGCTATCACCTCAAAGGAAAAACACATCCCCTGCATCGAACACAGGAAGAATTTAAGGTTTTGGTTGCTGATGCTGCAATGCCTTTCCTTACGGCTAGAACCAAGCGGTTTGTGGACGAGGTTGAATTATTTCTCGCCTCAGGTTTAACTGTCGAGGCCTTTGATAAAGCTTATAGAAGGTGTTTAGGTTGGAAGAAATCTGAGGAAACCTCAGAGGATAATGAACGAACTAGCACGGAGTGTGAGCCAATAGCTCCTTGCCTATATTTTATTGATGATGACTCAGATGAGGTTGACTGGACAGAAGATAAACTTGCATAG

Protein sequence

MEQEEAMKDDEEGGSPCIPNLNPNPCPICLGLLSQDSYLDQCFHTFCYKCIVRWTQVVSSRSSSLRQSSSVKCPLCKTENFSIIYGYDGITFQQHFINQNNGNSTFFSKDHKYRLQCYYTEPESGLLSDAFKVERYWKLHKYLQPNSWLEKWLKRELQALLQEEDVEIIMHHILGVIHSFSRSYHLKGKTHPLHRTQEEFKVLVADAAMPFLTARTKRFVDEVELFLASGLTVEAFDKAYRRCLGWKKSEETSEDNERTSTECEPIAPCLYFIDDDSDEVDWTEDKLA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo19370.1	Spo19370.1	mRNA

Homology

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BLAST of Spo19370.1 vs. NCBI nr
Match: gi|902232365|gb|KNA22583.1| (hypothetical protein SOVF_032840 [Spinacia oleracea])

HSP 1 Score: 602.8 bits (1553), Expect = 3.100e-169
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 1


		  
Query: 1   MEQEEAMKDDEEGGSPCIPNLNPNPCPICLGLLSQDSYLDQCFHTFCYKCIVRWTQVVSS 60
           MEQEEAMKDDEEGGSPCIPNLNPNPCPICLGLLSQDSYLDQCFHTFCYKCIVRWTQVVSS
Sbjct: 1   MEQEEAMKDDEEGGSPCIPNLNPNPCPICLGLLSQDSYLDQCFHTFCYKCIVRWTQVVSS 60

Query: 61  RSSSLRQSSSVKCPLCKTENFSIIYGYDGITFQQHFINQNNGNSTFFSKDHKYRLQCYYT 120
           RSSSLRQSSSVKCPLCKTENFSIIYGYDGITFQQHFINQNNGNSTFFSKDHKYRLQCYYT
Sbjct: 61  RSSSLRQSSSVKCPLCKTENFSIIYGYDGITFQQHFINQNNGNSTFFSKDHKYRLQCYYT 120

Query: 121 EPESGLLSDAFKVERYWKLHKYLQPNSWLEKWLKRELQALLQEEDVEIIMHHILGVIHSF 180
           EPESGLLSDAFKVERYWKLHKYLQPNSWLEKWLKRELQALLQEEDVEIIMHHILGVIHSF
Sbjct: 121 EPESGLLSDAFKVERYWKLHKYLQPNSWLEKWLKRELQALLQEEDVEIIMHHILGVIHSF 180

Query: 181 SRSYHLKGKTHPLHRTQEEFKVLVADAAMPFLTARTKRFVDEVELFLASGLTVEAFDKAY 240
           SRSYHLKGKTHPLHRTQEEFKVLVADAAMPFLTARTKRFVDEVELFLASGLTVEAFDKAY
Sbjct: 181 SRSYHLKGKTHPLHRTQEEFKVLVADAAMPFLTARTKRFVDEVELFLASGLTVEAFDKAY 240

Query: 241 RRCLGWKKSEETSEDNERTSTECEPIAPCLYFIDDDSDEVDWTEDKLA 289
           RRCLGWKKSEETSEDNERTSTECEPIAPCLYFIDDDSDEVDWTEDKLA
Sbjct: 241 RRCLGWKKSEETSEDNERTSTECEPIAPCLYFIDDDSDEVDWTEDKLA 288

[Close]

BLAST of Spo19370.1 vs. NCBI nr
Match: gi|731327914|ref|XP_010674771.1| (PREDICTED: uncharacterized protein LOC104890857 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 409.8 bits (1052), Expect = 3.800e-111
Identity = 199/286 (69.58%), Postives = 234/286 (81.82%), Query Frame = 1


		  
Query: 2   EQEEAMKDDEEGGSPCIPNLNPN------PCPICLGLLSQDSYLDQCFHTFCYKCIVRWT 61
           +QE+  K +++ G+   P LNPN      PCPICLG +SQ+S+LD+C+H +CY+CI+RWT
Sbjct: 4   QQEQPNKQNQKQGNISNPTLNPNQNPNLNPCPICLGPISQESFLDRCYHRYCYQCIIRWT 63

Query: 62  QVVSSRSSSLRQSSSVKCPLCKTENFSIIYGYDGITFQQHFINQNNGNSTFFSKDHKYRL 121
           QVV S SSSLRQ SS+KCPLCKTEN++I+YGYDG TFQ+HFI+QNNGNS FFSKDH+YRL
Sbjct: 64  QVVLSSSSSLRQPSSLKCPLCKTENYTIMYGYDGYTFQKHFIDQNNGNSHFFSKDHRYRL 123

Query: 122 QCYYTEPESGLLSDAFKVERYWKLHKYLQPNSWLEKWLKRELQALLQEEDVEIIMHHILG 181
           QCYYTEP+S   ++ FKVE YWK HKYLQ +SWLEKWL+RELQAL+QEEDVEIIMHHI+G
Sbjct: 124 QCYYTEPQSDPSTNLFKVEHYWKSHKYLQRSSWLEKWLRRELQALIQEEDVEIIMHHIVG 183

Query: 182 VIHSFSRSYHLKGKTHPLHRTQEEFKVLVADAAMPFLTARTKRFVDEVELFLASGLTVEA 241
           V+ SFSRSYH KGK+      +EEFK LV  AAMPFLTARTKRFVDE+ELFLASGLTVEA
Sbjct: 184 VVESFSRSYHRKGKSGSPKLKREEFKSLVTTAAMPFLTARTKRFVDEMELFLASGLTVEA 243

Query: 242 FDKAYRRCLGWKKSEETSEDNERTSTECEPIAPCLYFIDDDSDEVD 282
           +D AYRR L WKK EETSEDNE TS E E  A  LY  DD++DEVD
Sbjct: 244 YDGAYRRWLAWKKPEETSEDNEETSREREARASYLYVFDDETDEVD 289

[Close]

BLAST of Spo19370.1 vs. NCBI nr
Match: gi|296088311|emb|CBI36756.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 328.9 bits (842), Expect = 8.600e-87
Identity = 161/263 (61.22%), Postives = 194/263 (73.76%), Query Frame = 1


		  
Query: 19  PNLNPNPCPICLGLLSQDSYLDQCFHTFCYKCIVRWTQVVSSRSSSLRQSSSVKCPLCKT 78
           P+  PNPCPICLG + +DSYLDQCFH FCY CIVRWT+VV+S+   L  SS++KCP CKT
Sbjct: 42  PSEGPNPCPICLGPVVKDSYLDQCFHKFCYDCIVRWTKVVASKHCRL--SSTIKCPFCKT 101

Query: 79  ENFSIIYGYDGITFQQHFINQNNGNSTFFSKDHKYRLQCYYTEPESGLLSDAFKVERYWK 138
           ENFSI++GYDG +FQQH+INQ+ G S  FSK HKYRLQCYYTEP  G+L+D F V RYWK
Sbjct: 102 ENFSIVHGYDGSSFQQHYINQDFGKSFSFSKAHKYRLQCYYTEP--GILNDKFNVSRYWK 161

Query: 139 LHKYLQPNSWLEKWLKRELQALLQEEDVEIIMHHILGVIHSFSRSYHLKGKTHPLHRTQE 198
            HKY QPN WL+ WL+RE+QAL+QEEDV+II+HHILGV+ S  +    KG+T    R QE
Sbjct: 162 FHKYRQPNQWLQAWLRREIQALIQEEDVDIIVHHILGVLDSVIKRTEQKGQTITPERKQE 221

Query: 199 EFKVLVADAAMPFLTARTKRFVDEVELFLASGLTVEAFDKAYRRCLGWKKSEETSEDNER 258
           EFK  V+DAA PFLT RT RFV+EVELFLASGL +EA+D+ Y + LGW     T+E  E 
Sbjct: 222 EFKASVSDAARPFLTGRTDRFVNEVELFLASGLNIEAYDEVYLQQLGWTNPMATTEGVEE 281

Query: 259 TSTECEPIAPCLYFIDDDSDEVD 282
            +     + P LY  D DSD  D
Sbjct: 282 QNGHTH-VVPYLYLFDYDSDGTD 299

[Close]

BLAST of Spo19370.1 vs. NCBI nr
Match: gi|731416254|ref|XP_002280880.3| (PREDICTED: uncharacterized protein LOC100254480 [Vitis vinifera])

HSP 1 Score: 328.9 bits (842), Expect = 8.600e-87
Identity = 161/263 (61.22%), Postives = 194/263 (73.76%), Query Frame = 1


		  
Query: 19  PNLNPNPCPICLGLLSQDSYLDQCFHTFCYKCIVRWTQVVSSRSSSLRQSSSVKCPLCKT 78
           P+  PNPCPICLG + +DSYLDQCFH FCY CIVRWT+VV+S+   L  SS++KCP CKT
Sbjct: 23  PSEGPNPCPICLGPVVKDSYLDQCFHKFCYDCIVRWTKVVASKHCRL--SSTIKCPFCKT 82

Query: 79  ENFSIIYGYDGITFQQHFINQNNGNSTFFSKDHKYRLQCYYTEPESGLLSDAFKVERYWK 138
           ENFSI++GYDG +FQQH+INQ+ G S  FSK HKYRLQCYYTEP  G+L+D F V RYWK
Sbjct: 83  ENFSIVHGYDGSSFQQHYINQDFGKSFSFSKAHKYRLQCYYTEP--GILNDKFNVSRYWK 142

Query: 139 LHKYLQPNSWLEKWLKRELQALLQEEDVEIIMHHILGVIHSFSRSYHLKGKTHPLHRTQE 198
            HKY QPN WL+ WL+RE+QAL+QEEDV+II+HHILGV+ S  +    KG+T    R QE
Sbjct: 143 FHKYRQPNQWLQAWLRREIQALIQEEDVDIIVHHILGVLDSVIKRTEQKGQTITPERKQE 202

Query: 199 EFKVLVADAAMPFLTARTKRFVDEVELFLASGLTVEAFDKAYRRCLGWKKSEETSEDNER 258
           EFK  V+DAA PFLT RT RFV+EVELFLASGL +EA+D+ Y + LGW     T+E  E 
Sbjct: 203 EFKASVSDAARPFLTGRTDRFVNEVELFLASGLNIEAYDEVYLQQLGWTNPMATTEGVEE 262

Query: 259 TSTECEPIAPCLYFIDDDSDEVD 282
            +     + P LY  D DSD  D
Sbjct: 263 QNGHTH-VVPYLYLFDYDSDGTD 280

[Close]

BLAST of Spo19370.1 vs. NCBI nr
Match: gi|698551649|ref|XP_009769383.1| (PREDICTED: uncharacterized protein LOC104220251 [Nicotiana sylvestris])

HSP 1 Score: 320.1 bits (819), Expect = 4.000e-84
Identity = 160/269 (59.48%), Postives = 195/269 (72.49%), Query Frame = 1


		  
Query: 11  EEGGSPCI-PNLNPNPCPICLGLLSQDSYLDQCFHTFCYKCIVRWTQVVSSRSSSLRQSS 70
           E+GG+    P  +PNPCPICL  ++++SYLDQCFH FCY CI+RWT+VV+S  S  R  +
Sbjct: 3   EDGGNAAEQPASDPNPCPICLAPVTEESYLDQCFHKFCYNCILRWTKVVTSNQS--RAPA 62

Query: 71  SVKCPLCKTENFSIIYGYDGITFQQHFINQNNGNSTFFSKDHKYRLQCYYTEPESGLLSD 130
           SVKCPLCKTENFSII  Y G  FQQH++N+N  NS FF+K HKYRLQCYYT    G L D
Sbjct: 63  SVKCPLCKTENFSIIKSYGGRFFQQHYVNENLDNSVFFTKAHKYRLQCYYT--NEGGLFD 122

Query: 131 AFKVERYWKLHKYLQPNSWLEKWLKRELQALLQEEDVEIIMHHILGVIHSFSRSYHLKGK 190
            F V RYWKLHKYLQPN WL  WL+RE+QA+ QEEDV+II+HHILGVI SF R+   + K
Sbjct: 123 KFNVPRYWKLHKYLQPNPWLISWLRREIQAVTQEEDVDIIVHHILGVIDSFRRNEPKQIK 182

Query: 191 THPLHRTQEEFKVLVADAAMPFLTARTKRFVDEVELFLASGLTVEAFDKAYRRCLGWKKS 250
             P    QEEFK++V++AA PF+T RT RFV+E+ELFLAS LT++AFD  Y + LGWK  
Sbjct: 183 DTP-QAKQEEFKIMVSEAARPFITGRTDRFVNELELFLASSLTIDAFDSVYIQHLGWKIP 242

Query: 251 EETSEDNERTSTECEPIAPCLYFIDDDSD 279
           E+  E       E  P+ P LYF D+DSD
Sbjct: 243 EKIEEGGVGEPVEQGPLVPYLYFFDEDSD 266

[Close]

BLAST of Spo19370.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RSZ2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_032840 PE=4 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 2.200e-169
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 1


		  
Query: 1   MEQEEAMKDDEEGGSPCIPNLNPNPCPICLGLLSQDSYLDQCFHTFCYKCIVRWTQVVSS 60
           MEQEEAMKDDEEGGSPCIPNLNPNPCPICLGLLSQDSYLDQCFHTFCYKCIVRWTQVVSS
Sbjct: 1   MEQEEAMKDDEEGGSPCIPNLNPNPCPICLGLLSQDSYLDQCFHTFCYKCIVRWTQVVSS 60

Query: 61  RSSSLRQSSSVKCPLCKTENFSIIYGYDGITFQQHFINQNNGNSTFFSKDHKYRLQCYYT 120
           RSSSLRQSSSVKCPLCKTENFSIIYGYDGITFQQHFINQNNGNSTFFSKDHKYRLQCYYT
Sbjct: 61  RSSSLRQSSSVKCPLCKTENFSIIYGYDGITFQQHFINQNNGNSTFFSKDHKYRLQCYYT 120

Query: 121 EPESGLLSDAFKVERYWKLHKYLQPNSWLEKWLKRELQALLQEEDVEIIMHHILGVIHSF 180
           EPESGLLSDAFKVERYWKLHKYLQPNSWLEKWLKRELQALLQEEDVEIIMHHILGVIHSF
Sbjct: 121 EPESGLLSDAFKVERYWKLHKYLQPNSWLEKWLKRELQALLQEEDVEIIMHHILGVIHSF 180

Query: 181 SRSYHLKGKTHPLHRTQEEFKVLVADAAMPFLTARTKRFVDEVELFLASGLTVEAFDKAY 240
           SRSYHLKGKTHPLHRTQEEFKVLVADAAMPFLTARTKRFVDEVELFLASGLTVEAFDKAY
Sbjct: 181 SRSYHLKGKTHPLHRTQEEFKVLVADAAMPFLTARTKRFVDEVELFLASGLTVEAFDKAY 240

Query: 241 RRCLGWKKSEETSEDNERTSTECEPIAPCLYFIDDDSDEVDWTEDKLA 289
           RRCLGWKKSEETSEDNERTSTECEPIAPCLYFIDDDSDEVDWTEDKLA
Sbjct: 241 RRCLGWKKSEETSEDNERTSTECEPIAPCLYFIDDDSDEVDWTEDKLA 288

[Close]

BLAST of Spo19370.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CJR6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g081650 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 2.700e-111
Identity = 199/286 (69.58%), Postives = 234/286 (81.82%), Query Frame = 1


		  
Query: 2   EQEEAMKDDEEGGSPCIPNLNPN------PCPICLGLLSQDSYLDQCFHTFCYKCIVRWT 61
           +QE+  K +++ G+   P LNPN      PCPICLG +SQ+S+LD+C+H +CY+CI+RWT
Sbjct: 4   QQEQPNKQNQKQGNISNPTLNPNQNPNLNPCPICLGPISQESFLDRCYHRYCYQCIIRWT 63

Query: 62  QVVSSRSSSLRQSSSVKCPLCKTENFSIIYGYDGITFQQHFINQNNGNSTFFSKDHKYRL 121
           QVV S SSSLRQ SS+KCPLCKTEN++I+YGYDG TFQ+HFI+QNNGNS FFSKDH+YRL
Sbjct: 64  QVVLSSSSSLRQPSSLKCPLCKTENYTIMYGYDGYTFQKHFIDQNNGNSHFFSKDHRYRL 123

Query: 122 QCYYTEPESGLLSDAFKVERYWKLHKYLQPNSWLEKWLKRELQALLQEEDVEIIMHHILG 181
           QCYYTEP+S   ++ FKVE YWK HKYLQ +SWLEKWL+RELQAL+QEEDVEIIMHHI+G
Sbjct: 124 QCYYTEPQSDPSTNLFKVEHYWKSHKYLQRSSWLEKWLRRELQALIQEEDVEIIMHHIVG 183

Query: 182 VIHSFSRSYHLKGKTHPLHRTQEEFKVLVADAAMPFLTARTKRFVDEVELFLASGLTVEA 241
           V+ SFSRSYH KGK+      +EEFK LV  AAMPFLTARTKRFVDE+ELFLASGLTVEA
Sbjct: 184 VVESFSRSYHRKGKSGSPKLKREEFKSLVTTAAMPFLTARTKRFVDEMELFLASGLTVEA 243

Query: 242 FDKAYRRCLGWKKSEETSEDNERTSTECEPIAPCLYFIDDDSDEVD 282
           +D AYRR L WKK EETSEDNE TS E E  A  LY  DD++DEVD
Sbjct: 244 YDGAYRRWLAWKKPEETSEDNEETSREREARASYLYVFDDETDEVD 289

[Close]

BLAST of Spo19370.1 vs. UniProtKB/TrEMBL
Match: F6HYY8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0128g00310 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 6.000e-87
Identity = 161/263 (61.22%), Postives = 194/263 (73.76%), Query Frame = 1


		  
Query: 19  PNLNPNPCPICLGLLSQDSYLDQCFHTFCYKCIVRWTQVVSSRSSSLRQSSSVKCPLCKT 78
           P+  PNPCPICLG + +DSYLDQCFH FCY CIVRWT+VV+S+   L  SS++KCP CKT
Sbjct: 23  PSEGPNPCPICLGPVVKDSYLDQCFHKFCYDCIVRWTKVVASKHCRL--SSTIKCPFCKT 82

Query: 79  ENFSIIYGYDGITFQQHFINQNNGNSTFFSKDHKYRLQCYYTEPESGLLSDAFKVERYWK 138
           ENFSI++GYDG +FQQH+INQ+ G S  FSK HKYRLQCYYTEP  G+L+D F V RYWK
Sbjct: 83  ENFSIVHGYDGSSFQQHYINQDFGKSFSFSKAHKYRLQCYYTEP--GILNDKFNVSRYWK 142

Query: 139 LHKYLQPNSWLEKWLKRELQALLQEEDVEIIMHHILGVIHSFSRSYHLKGKTHPLHRTQE 198
            HKY QPN WL+ WL+RE+QAL+QEEDV+II+HHILGV+ S  +    KG+T    R QE
Sbjct: 143 FHKYRQPNQWLQAWLRREIQALIQEEDVDIIVHHILGVLDSVIKRTEQKGQTITPERKQE 202

Query: 199 EFKVLVADAAMPFLTARTKRFVDEVELFLASGLTVEAFDKAYRRCLGWKKSEETSEDNER 258
           EFK  V+DAA PFLT RT RFV+EVELFLASGL +EA+D+ Y + LGW     T+E  E 
Sbjct: 203 EFKASVSDAARPFLTGRTDRFVNEVELFLASGLNIEAYDEVYLQQLGWTNPMATTEGVEE 262

Query: 259 TSTECEPIAPCLYFIDDDSDEVD 282
            +     + P LY  D DSD  D
Sbjct: 263 QNGHTH-VVPYLYLFDYDSDGTD 280

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BLAST of Spo19370.1 vs. UniProtKB/TrEMBL
Match: A0A067F053_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g045854mg PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 4.000e-83
Identity = 154/272 (56.62%), Postives = 196/272 (72.06%), Query Frame = 1


		  
Query: 10  DEEGGSPCIPNLNPNPCPICLGLLSQDSYLDQCFHTFCYKCIVRWTQVVSSRSSSLRQSS 69
           D+ GGS    + NPNPCPICLG + +DSYLD+CFH FCY CIV WT+VV+S+ SSL   S
Sbjct: 5   DQSGGSSSCSSENPNPCPICLGPVVEDSYLDKCFHKFCYNCIVHWTKVVASKHSSLL--S 64

Query: 70  SVKCPLCKTENFSIIYGYDGITFQQHFINQNNGNSTFFSKDHKYRLQCYYTEPESGLLSD 129
           SVKCPLCKTEN SII+GYDG  FQ+++I+Q  G+S FFSK H+YRLQ YYTEP  G+L+D
Sbjct: 65  SVKCPLCKTENVSIIHGYDGTYFQRNYISQIFGDSFFFSKAHRYRLQSYYTEP--GILND 124

Query: 130 AFKVERYWKLHKYLQPNSWLEKWLKRELQALLQEEDVEIIMHHILGVIHSFSRSYHLKGK 189
            F V RYWK  KYLQ N WL+ WL+RE+QA++QEEDVEI++HHILGV+ SF +    + +
Sbjct: 125 VFNVSRYWKSRKYLQSNQWLQSWLRREIQAVMQEEDVEIVVHHILGVVDSFLKRNKQRCQ 184

Query: 190 THPLHRTQEEFKVLVADAAMPFLTARTKRFVDEVELFLASGLTVEAFDKAYRRCLGWKKS 249
                  +E+FK LV+DAA PFL ART RFV+E++LFLAS L +EA+D  Y + LGW   
Sbjct: 185 MGTPETKEEDFKALVSDAARPFLMARTDRFVNEMQLFLASALNIEAYDAVYMQRLGWNTP 244

Query: 250 EETSEDNERTSTECEPIAPCLYFIDDDSDEVD 282
             T E  E  ++   P+ P L+  D+DSD  D
Sbjct: 245 RVTMESGEGETSGQTPVIPYLHIFDEDSDGTD 272

[Close]

BLAST of Spo19370.1 vs. UniProtKB/TrEMBL
Match: V4V3R0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002145mg PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 4.000e-83
Identity = 154/272 (56.62%), Postives = 196/272 (72.06%), Query Frame = 1


		  
Query: 10  DEEGGSPCIPNLNPNPCPICLGLLSQDSYLDQCFHTFCYKCIVRWTQVVSSRSSSLRQSS 69
           D+ GGS    + NPNPCPICLG + +DSYLD+CFH FCY CIV WT+VV+S+ SSL   S
Sbjct: 5   DQSGGSSSCSSENPNPCPICLGPVVEDSYLDKCFHKFCYNCIVHWTKVVASKHSSLL--S 64

Query: 70  SVKCPLCKTENFSIIYGYDGITFQQHFINQNNGNSTFFSKDHKYRLQCYYTEPESGLLSD 129
           SVKCPLCKTEN SII+GYDG  FQ+++I+Q  G+S FFSK H+YRLQ YYTEP  G+L+D
Sbjct: 65  SVKCPLCKTENVSIIHGYDGTYFQRNYISQIFGDSFFFSKAHRYRLQSYYTEP--GILND 124

Query: 130 AFKVERYWKLHKYLQPNSWLEKWLKRELQALLQEEDVEIIMHHILGVIHSFSRSYHLKGK 189
            F V RYWK  KYLQ N WL+ WL+RE+QA++QEEDVEI++HHILGV+ SF +    + +
Sbjct: 125 VFNVSRYWKSRKYLQSNQWLQSWLRREIQAVMQEEDVEIVVHHILGVVDSFLKRNKQRCQ 184

Query: 190 THPLHRTQEEFKVLVADAAMPFLTARTKRFVDEVELFLASGLTVEAFDKAYRRCLGWKKS 249
                  +E+FK LV+DAA PFL ART RFV+E++LFLAS L +EA+D  Y + LGW   
Sbjct: 185 MGTPETKEEDFKALVSDAARPFLMARTDRFVNEMQLFLASALNIEAYDAVYMQRLGWNTP 244

Query: 250 EETSEDNERTSTECEPIAPCLYFIDDDSDEVD 282
             T E  E  ++   P+ P L+  D+DSD  D
Sbjct: 245 RVTMESGEGETSGQTPVIPYLHIFDEDSDGTD 272

[Close]

BLAST of Spo19370.1 vs. ExPASy Swiss-Prot
Match: TOPRS_HUMAN (E3 ubiquitin-protein ligase Topors OS=Homo sapiens GN=TOPORS PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 8.000e-8
Identity = 31/111 (27.93%), Postives = 53/111 (47.75%), Query Frame = 1


		  
Query: 26  CPICLGLLSQDSYLDQCFHTFCYKCIVRWTQVVSSRSSSLRQSSSVKCPLCKTENFSIIY 85
           CPICL      SYLD+C H FC++C+  W++            +  +CPLCK    SI +
Sbjct: 103 CPICLDRFDNVSYLDRCLHKFCFRCVQEWSK------------NKAECPLCKQPFDSIFH 162

Query: 86  GYDGITFQQHFINQNNGNSTFFSKDHKYRLQCYYT-EPESGLLSDAFKVER 136
                   + ++ + + N +F + D ++R +   T E  + + S +  V R
Sbjct: 163 SVRAEDDFKEYVLRPSYNGSFVTPDRRFRYRTTLTRERNASVYSPSGPVNR 201

[Close]

BLAST of Spo19370.1 vs. ExPASy Swiss-Prot
Match: TOPRS_MOUSE (E3 ubiquitin-protein ligase Topors OS=Mus musculus GN=Topors PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.300e-6
Identity = 28/103 (27.18%), Postives = 48/103 (46.60%), Query Frame = 1


		  
Query: 26  CPICLGLLSQDSYLDQCFHTFCYKCIVRWTQVVSSRSSSLRQSSSVKCPLCKTENFSIIY 85
           CPICL      SYLD+C H FC++C+  W++            +  +CPLCK    SI +
Sbjct: 104 CPICLDRFDNVSYLDRCLHKFCFRCVQEWSK------------NKAECPLCKQPFDSIFH 163

Query: 86  GYDGITFQQHFINQNNGNSTFFSKD-HKYRLQCYYTEPESGLL 128
                   + ++ + + N +F + +  ++R +   T   S  L
Sbjct: 164 SVRAEDDFKEYVLRPSYNGSFTNPEVRRFRYRTTMTRERSASL 194

[Close]

BLAST of Spo19370.1 vs. TAIR (Arabidopsis)
Match: AT3G05250.1 (RING/U-box superfamily protein)

HSP 1 Score: 266.2 bits (679), Expect = 2.400e-71
Identity = 140/280 (50.00%), Postives = 191/280 (68.21%), Query Frame = 1


		  
Query: 13  GGSPCIPNLNP-NPCPICLGLLSQDSYLDQCFHTFCYKCIVRWTQVVSSRSSSLRQSSSV 72
           GGS  I + +  +PCPICLG   ++SYLD CFH FC+ CI +W +VVSS++S  +Q SSV
Sbjct: 8   GGSGSIDDGSDFDPCPICLGQFLRESYLDTCFHKFCFNCIKQWIKVVSSKAS--KQRSSV 67

Query: 73  KCPLCKTENFSIIYGYDGITFQQHFINQNNGNSTFFSKDHKYRLQCYYTEPESGLLSDAF 132
            CPLCKTEN SII+ YDG +F++H+I+ N  +    +K+ +YRLQCYYTE  SG L+D F
Sbjct: 68  TCPLCKTENLSIIHNYDGCSFERHYIDPNIPDGFVLTKEQRYRLQCYYTE--SGFLADVF 127

Query: 133 KVERYWKLHKYLQPNSWLEKWLKRELQALLQEEDVEIIMHHILGVIHSFSR--SYHLKGK 192
            V R+WKL K+LQPN  LE WL+RELQAL+QEEDV+I++HH++GV+ SF +      K +
Sbjct: 128 DVARFWKLQKFLQPNRCLEAWLRRELQALMQEEDVDIVLHHLVGVMESFCKRIKQRRKQE 187

Query: 193 THPLHRT-QEEFKVLVADAAMPFLTARTKRFVDEVELFLASGLTVEAFDKAYRRCL---- 252
           T     T QE+FK +V++AA PF+ ART RFVDE+ELFLA+GL +EA+D  Y++ L    
Sbjct: 188 TRSAETTNQEQFKAVVSEAARPFVMARTDRFVDELELFLAAGLNLEAYDAIYKQGLEGNN 247

Query: 253 ------GWKKSEETSEDNERTSTECEPIAPCLYFIDDDSD 279
                   ++ EE  E N RT      + P L+  ++DSD
Sbjct: 248 RREIGAASEEREEVEEHNVRTR-----VTPYLFIFEEDSD 278

The following BLAST results are available for this feature:

BLAST of Spo19370.1 vs. NCBI nr
BLAST of Spo19370.1 vs. UniProtKB/TrEMBL
BLAST of Spo19370.1 vs. ExPASy Swiss-Prot
BLAST of Spo19370.1 vs. TAIR (Arabidopsis)

BLAST of Spo19370.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902232365\|gb\|KNA22583.1\|	3.1e-169	100.	hypothetical protein SOVF_0328...	[more]
gi\|731327914\|ref\|XP_010674771.1\|	3.8e-111	69.5	PREDICTED: uncharacterized pro...	[more]
gi\|296088311\|emb\|CBI36756.3\|	8.6e-87	61.2	unnamed protein product [Vitis...	[more]
gi\|731416254\|ref\|XP_002280880.3\|	8.6e-87	61.2	PREDICTED: uncharacterized pro...	[more]
gi\|698551649\|ref\|XP_009769383.1\|	4.0e-84	59.4	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo19370.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RSZ2_SPIOL	2.2e-169	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CJR6_BETVU	2.7e-111	69.5	Uncharacterized protein OS=Bet...	[more]
F6HYY8_VITVI	6.0e-87	61.2	Putative uncharacterized prote...	[more]
A0A067F053_CITSI	4.0e-83	56.6	Uncharacterized protein OS=Cit...	[more]
V4V3R0_9ROSI	4.0e-83	56.6	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo19370.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2


Match Name	E-value	Identity	Description
TOPRS_HUMAN	8.0e-8	27.9	E3 ubiquitin-protein ligase To...	[more]
TOPRS_MOUSE	3.3e-6	27.1	E3 ubiquitin-protein ligase To...	[more]

BLAST of Spo19370.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G05250.1	2.4e-71	50.0	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 26..76 score: 1.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 26..77 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 25..79 score: 6.5
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 42..51 scor
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 26..76 score: 7.6
None	No IPR available	PANTHER	PTHR22937	RING FINGER CONTAINING PROTEIN	coord: 17..256 score: 3.3
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 25..88 score: 2.05

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0046872	metal ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo09434	0.65	Barchart \| Table