Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTR exon polypeptide CDS three_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAGCATGTACGAACCACAAATTGTATGGACAAAATGAATCATTCGGAGATAGGCCATTACTACAAGCTAGCCACAAGGTATTTCTCTCTCTTCCCTCTGAACCAGTAACCCCATCAACAACCAAACTTTGAGAGAGAAGATCGAATTAAGG ATGGCAGTGTCTTCGACATGCATGCCTCACAGGGAGTTGATGCCAACATTAGTTAAATCCACAAATACTTCAACCCTTTTTTGGTTGAATAACAATACTAATAATAATGTTAATGTTAATGTTATTACCACTAATAATTATGTTACTCTTACAAGAAAGGCCCCCTGTTCGAGGTTTCTAGCAAGGAGCACTGAGGATGCTTCGGAGATGACGGCAACATCAACGGACCAGTCATGGGAAGGAGAAGGAGAAAACAGTCCAATGGAAATGCCTAAAGGACCTCCTTCTATCATCTCTGCCCTTAACGTTGAAAAGGCTCTTCGTGGCATTG GTACACCTTCATTTTTTGTTTGTCAATTTAATTGTTTTCGGTATGTGTGTACTCCCTCTGTCCCTTAATACTTGACCCAATTTGACTTTTCACACTATTTACATAATTTACTTTGCCCCTATTTTATTTATAATATATGAAAACAAATGTTAGTATATACTATATTGTTGACTTCATCTTAATATATATTTTTAAAATATTAATATTTTATAAGTTTTTATAATATGTAGTTAAAGTAATTGGTGATCAAAGTTGTGCATTGACAAACATGTGCGGTCAAAACAGATCGAGTATTAAGAGACGGATGGAGTATTGTTAAACTCAGAGATTAACGACCACCTAATATTTCATAAATGTCACCTCGAATTGCACAACTCTTTAAATTAATTAGCTCTACCGATTAGAGCTAGGATCACAGAAATGTAGAAGAATATGCCTGATAATTTGATAAAACCTTGTTTTAGAGTGGTGCAGGAATTACGGATGTGGACCATTATGCTAGGCTGGGACTTCGAAGAGGATGCACCTATGATCAG GTAAATAAGATCCGCTTAAAAGCGGACTACATGAAATTTTCACCATATAACCAACTTTATACTGTTTAGGGACAATTTTATTTTGCTGATTTGCTAAAGGAAACCAAAAATAGTTTTGCTTGTTTTTTTTTTTTTGGTGCGAATGAGCCACAAGGGCAATATAAATTACAAATGGGGGCGGGGGGATTCGAACCTGAGACCTANTTTTTTTTTTTTGGTGCGAATGAGCCACAAGGGCAATATAAATTACAAATGGGGGCGGGGGGATTCGAACCTGAGACCTATTGTACACAGGCCCTCAGTCTTAACCACTAGGCCAAGACATCATTGGTAAAAATAGTTTTGCTTGTAACTGCAAGGAACATTACTGCATTTGGTTATATACATAAAATTACCACTAACTACATTTCTAAAAATATGTTGTTTTGTTCAAACTATTCAAAGTTTCTTAATTATAGCTAACTTAATTTTCAAAAATGTAATTTCCATGTATACTTGAGCAGGTTGGAGCTGCATACGAGATTCAAGTCAAGGAATTATCCAGCCAAGGGATGGACGAGGAACAATTTAACAAAGAGCGTGATCTTCTTAAG GTGACACAAAATTGTACTCCCTTTGTCATATATTCCAAAATAATACAAGTTCTTGTAATAATTAATTGTAGAAGTGTCTTAAAGTATTTATGGGGCGTTTTCTTTGCCTTTAAAGAAAAAAGTTTCGGGTCTATTAAGTCAAATAAGTTCCGATATGATAAAATAAGTTAAGATAAATTATAAATTGGTTCAATAACTTTAGTCTCTTATAGTTAATCAGATCTAAAAAGTTTCTATTAGATCAATCAGGTATTCAGGTCCAATAAGTTCCACACATAAGTTGAAAATTTAATAATTTTGCCATATGACAGGATAACAAGCAAACTAAAAATATAAGTCAATAAATTTACAGGAATCGTACAATATATTATCTTCTGAACAAGAAAGAAGGTTATATGATTGGAGCTTGGCGAGGAACAGCGCACCTGAGAGATATATGTGGCCGTTCGAGGCCGACATAACACAAACTCCTAGATGGGGTACTCCTCCTCCACAG GTAAAGTCGTTGCAATTTTTATTTTTGTGTATGTTAGACGTTTTAACAAATACTTGCATGTATAATTATCTATTTTTAATGATCCAGTTGATTTCTTAATTTTCTCCAAATTAAGCTACTAAAACTGAAGATAATTTGTTACAGGAACCTGAAGATGTCGGACCTACAACAGCTGTGGGATATTTCCTATTAGCCTGGTTTGTATTCTCTTTCATATTATCCATTGCTCTCAACCGATAG AGCATCGTTACGTTACGTTACGTTGCTGTGCCGCGTACTCGCAAATGTCGATCTCTCCATTCAAATTTTATTCATCATTGCTGGAGTAGTAGTTTTGTAAATATGCTTATAATGCTTTGTGGAATTCCTAAATATATTAATTGAATAAATAAATTAATACGGAGTAGTTTATACTACTTCATAAATTCCTTCACATTAAACCTTTTATATATCCAAACTTAAATACTTCCTCCGTCTTTTAATACTCGCAACGTTTGGACTTTTGTCACTATTCATATAATCTACTTTGACTATTCGTAGTGTTTTTTATATAAGATAAA mRNA sequence
CTAGCATGTACGAACCACAAATTGTATGGACAAAATGAATCATTCGGAGATAGGCCATTACTACAAGCTAGCCACAAGGTATTTCTCTCTCTTCCCTCTGAACCAGTAACCCCATCAACAACCAAACTTTGAGAGAGAAGATCGAATTAAGGATGGCAGTGTCTTCGACATGCATGCCTCACAGGGAGTTGATGCCAACATTAGTTAAATCCACAAATACTTCAACCCTTTTTTGGTTGAATAACAATACTAATAATAATGTTAATGTTAATGTTATTACCACTAATAATTATGTTACTCTTACAAGAAAGGCCCCCTGTTCGAGGTTTCTAGCAAGGAGCACTGAGGATGCTTCGGAGATGACGGCAACATCAACGGACCAGTCATGGGAAGGAGAAGGAGAAAACAGTCCAATGGAAATGCCTAAAGGACCTCCTTCTATCATCTCTGCCCTTAACGTTGAAAAGGCTCTTCGTGGCATTGGAATTACGGATGTGGACCATTATGCTAGGCTGGGACTTCGAAGAGGATGCACCTATGATCAGGTTGGAGCTGCATACGAGATTCAAGTCAAGGAATTATCCAGCCAAGGGATGGACGAGGAACAATTTAACAAAGAGCGTGATCTTCTTAAGGAATCGTACAATATATTATCTTCTGAACAAGAAAGAAGGTTATATGATTGGAGCTTGGCGAGGAACAGCGCACCTGAGAGATATATGTGGCCGTTCGAGGCCGACATAACACAAACTCCTAGATGGGGTACTCCTCCTCCACAGGAACCTGAAGATGTCGGACCTACAACAGCTGTGGGATATTTCCTATTAGCCTGGTTTGTATTCTCTTTCATATTATCCATTGCTCTCAACCGATAGAGCATCGTTACGTTACGTTACGTTGCTGTGCCGCGTACTCGCAAATGTCGATCTCTCCATTCAAATTTTATTCATCATTGCTGGAGTAGTAGTTTTGTAAATATGCTTATAATGCTTTGTGGAATTCCTAAATATATTAATTGAATAAATAAATTAATACGGAGTAGTTTATACTACTTCATAAATTCCTTCACATTAAACCTTTTATATATCCAAACTTAAATACTTCCTCCGTCTTTTAATACTCGCAACGTTTGGACTTTTGTCACTATTCATATAATCTACTTTGACTATTCGTAGTGTTTTTTATATAAGATAAA Coding sequence (CDS)
ATGGCAGTGTCTTCGACATGCATGCCTCACAGGGAGTTGATGCCAACATTAGTTAAATCCACAAATACTTCAACCCTTTTTTGGTTGAATAACAATACTAATAATAATGTTAATGTTAATGTTATTACCACTAATAATTATGTTACTCTTACAAGAAAGGCCCCCTGTTCGAGGTTTCTAGCAAGGAGCACTGAGGATGCTTCGGAGATGACGGCAACATCAACGGACCAGTCATGGGAAGGAGAAGGAGAAAACAGTCCAATGGAAATGCCTAAAGGACCTCCTTCTATCATCTCTGCCCTTAACGTTGAAAAGGCTCTTCGTGGCATTGGAATTACGGATGTGGACCATTATGCTAGGCTGGGACTTCGAAGAGGATGCACCTATGATCAGGTTGGAGCTGCATACGAGATTCAAGTCAAGGAATTATCCAGCCAAGGGATGGACGAGGAACAATTTAACAAAGAGCGTGATCTTCTTAAGGAATCGTACAATATATTATCTTCTGAACAAGAAAGAAGGTTATATGATTGGAGCTTGGCGAGGAACAGCGCACCTGAGAGATATATGTGGCCGTTCGAGGCCGACATAACACAAACTCCTAGATGGGGTACTCCTCCTCCACAGGAACCTGAAGATGTCGGACCTACAACAGCTGTGGGATATTTCCTATTAGCCTGGTTTGTATTCTCTTTCATATTATCCATTGCTCTCAACCGATAG Protein sequence
MAVSSTCMPHRELMPTLVKSTNTSTLFWLNNNTNNNVNVNVITTNNYVTLTRKAPCSRFLARSTEDASEMTATSTDQSWEGEGENSPMEMPKGPPSIISALNVEKALRGIGITDVDHYARLGLRRGCTYDQVGAAYEIQVKELSSQGMDEEQFNKERDLLKESYNILSSEQERRLYDWSLARNSAPERYMWPFEADITQTPRWGTPPPQEPEDVGPTTAVGYFLLAWFVFSFILSIALNR
Homology
BLAST of Spo19438.1 vs. NCBI nr
Match:
gi|902197564|gb|KNA13470.1| (hypothetical protein SOVF_116780 [Spinacia oleracea])
HSP 1 Score: 475.7 bits (1223), Expect = 4.700e-131
Identity = 239/240 (99.58%), Postives = 240/240 (100.00%), Query Frame = 1
Query: 1 MAVSSTCMPHRELMPTLVKSTNTSTLFWLNNNTNNNVNVNVITTNNYVTLTRKAPCSRFL 60 MAVSSTCMPHRELMPTLVKSTNTSTLFWLNNNTNNNVNVNVITTNNYVTLTRKAPCSRFL Sbjct: 1 MAVSSTCMPHRELMPTLVKSTNTSTLFWLNNNTNNNVNVNVITTNNYVTLTRKAPCSRFL 60 Query: 61 ARSTEDASEMTATSTDQSWEGEGENSPMEMPKGPPSIISALNVEKALRGIGITDVDHYAR 120 ARSTEDASEMTAT+TDQSWEGEGENSPMEMPKGPPSIISALNVEKALRGIGITDVDHYAR Sbjct: 61 ARSTEDASEMTATATDQSWEGEGENSPMEMPKGPPSIISALNVEKALRGIGITDVDHYAR 120 Query: 121 LGLRRGCTYDQVGAAYEIQVKELSSQGMDEEQFNKERDLLKESYNILSSEQERRLYDWSL 180 LGLRRGCTYDQVGAAYEIQVKELSSQGMDEEQFNKERDLLKESYNILSSEQERRLYDWSL Sbjct: 121 LGLRRGCTYDQVGAAYEIQVKELSSQGMDEEQFNKERDLLKESYNILSSEQERRLYDWSL 180 Query: 181 ARNSAPERYMWPFEADITQTPRWGTPPPQEPEDVGPTTAVGYFLLAWFVFSFILSIALNR 240 ARNSAPERYMWPFEADITQTPRWGTPPPQEPEDVGPTTAVGYFLLAWFVFSFILSIALNR Sbjct: 181 ARNSAPERYMWPFEADITQTPRWGTPPPQEPEDVGPTTAVGYFLLAWFVFSFILSIALNR 240
BLAST of Spo19438.1 vs. NCBI nr
Match:
gi|731317702|ref|XP_010669327.1| (PREDICTED: uncharacterized protein LOC104886572 [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 355.5 bits (911), Expect = 7.200e-95
Identity = 186/245 (75.92%), Postives = 210/245 (85.71%), Query Frame = 1
Query: 1 MAVSST--CMPHRELMPTLVKSTNTSTLFWLNNNTNNNVNVNVITTNNYVTLTRKAPCSR 60 MAVSST CMPHRELMP+LVK TNT+ LF NN N N N+I+TNNYVTLTRK C R Sbjct: 1 MAVSSTTACMPHRELMPSLVKPTNTTILF--NNLKNTNNTSNIISTNNYVTLTRKVTCGR 60 Query: 61 FLARSTEDASEMTATST----DQSWEGEGENSPMEMPKGPPSIISALNVEKALRGIGITD 120 F+A+S+EDASE TAT+T D+SWEG+GE+SPMEMPKGPPS+ISALNVEKALRGI ITD Sbjct: 61 FVAKSSEDASETTATTTTTTTDESWEGDGESSPMEMPKGPPSLISALNVEKALRGIAITD 120 Query: 121 VDHYARLGLRRGCTYDQVGAAYEIQVKELSSQGMDEEQFNKERDLLKESYNILSSEQERR 180 VDHYAR+GLRRGC+YDQVG AY+I+V+ELSSQG+DEE+ NKER+LLKESYNILSSE ERR Sbjct: 121 VDHYARMGLRRGCSYDQVGPAYQIKVQELSSQGLDEEELNKERELLKESYNILSSEVERR 180 Query: 181 LYDWSLARNSAPERYMWPFEADITQTPRWGTPPPQEPEDVGPTTAVGYFLLAWFVFSFIL 240 LYDWSLAR+ AP+RY WPFEADITQTP G PPP+EPEDVGPT AVGYF L W V +F L Sbjct: 181 LYDWSLARSGAPDRYAWPFEADITQTPT-GIPPPREPEDVGPTIAVGYFFLGWLVLAFTL 240
BLAST of Spo19438.1 vs. NCBI nr
Match:
gi|720018892|ref|XP_010261937.1| (PREDICTED: uncharacterized protein LOC104600594 [Nelumbo nucifera])
HSP 1 Score: 226.1 bits (575), Expect = 6.500e-56
Identity = 119/183 (65.03%), Postives = 137/183 (74.86%), Query Frame = 1
Query: 58 RFLARSTEDASEMTATSTDQSWEGEGENSPMEMPKGPPSIISALNVEKALRGIGITDVDH 117 R L RS+ DAS T+T E E E S +E K P S+ISALNVE+ LRGI ITD DH Sbjct: 43 RCLIRSSSDASPEAETAT----ETESEESSVEASKVPYSLISALNVERVLRGIAITDADH 102 Query: 118 YARLGLRRGCTYDQVGAAYEIQVKELSSQGMDEEQFNKERDLLKESYNILSSEQERRLYD 177 Y RLGL+RGC YDQV AY+ + +EL +QG+DEE+ K+ +LLKESY ILSSE+ERRLYD Sbjct: 103 YGRLGLQRGCPYDQVAIAYKAKSEELMNQGLDEEELGKKLELLKESYLILSSEEERRLYD 162 Query: 178 WSLARNSAPERYMWPFEADITQTPRWGTPPPQEPEDVGPTTAVGYFLLAWFVFSFILSIA 237 WSLAR+ PERY+WPFE DITQTP PPPQEPEDVGPT VGYFLL W + SF LSIA Sbjct: 163 WSLARSEKPERYVWPFEVDITQTPT-QPPPPQEPEDVGPTRVVGYFLLGWLILSFTLSIA 220 Query: 238 LNR 241 LNR Sbjct: 223 LNR 220
BLAST of Spo19438.1 vs. NCBI nr
Match:
gi|823221345|ref|XP_012443363.1| (PREDICTED: NAD(P)H-quinone oxidoreductase subunit U, chloroplastic [Gossypium raimondii])
HSP 1 Score: 222.2 bits (565), Expect = 9.500e-55
Identity = 124/223 (55.61%), Postives = 150/223 (67.26%), Query Frame = 1
Query: 18 VKSTNTSTLFWLNNNTNNNVNVNVITTNNYVTLTRKAPCSRFLARSTEDASEMTATSTDQ 77 + +T +TL+ NN + + N +N R RS+ D S T T+ Sbjct: 3 LSTTAATTLYISGNNIHASTPKNASLFSNSTISFSAKQRRRLSIRSSGDVSSETPTT--- 62 Query: 78 SWEGEGENSPMEMPKGPPSIISALNVEKALRGIGITDVDHYARLGLRRGCTYDQVGAAYE 137 E E E S E PKGPPS+ISALNVE+ALRGI ITD DHY RLGL+RGC+Y+QV AY Sbjct: 63 --ETESEKSIDEAPKGPPSLISALNVERALRGIAITDADHYGRLGLQRGCSYEQVTVAYR 122 Query: 138 IQVKELSSQGMDEEQFNKERDLLKESYNILSSEQERRLYDWSLARNSAPERYMWPFEADI 197 +V EL +QG+DEE+ +K+ DLLKESY+ILSS +ERRLYDWSLAR P+RY WPFE DI Sbjct: 123 NKVDELLNQGLDEEELSKKMDLLKESYSILSSVEERRLYDWSLARTEQPDRYAWPFEVDI 182 Query: 198 TQTPRWGTPPPQEPEDVGPTTAVGYFLLAWFVFSFILSIALNR 241 TQTP PPP EPEDVGPT AVGYF+L W + SF+LSIA R Sbjct: 183 TQTPT-EEPPPGEPEDVGPTRAVGYFMLGWLILSFVLSIAFAR 219
BLAST of Spo19438.1 vs. NCBI nr
Match:
gi|976915549|gb|KVI01473.1| (DnaJ domain-containing protein [Cynara cardunculus var. scolymus])
HSP 1 Score: 218.4 bits (555), Expect = 1.400e-53
Identity = 123/228 (53.95%), Postives = 161/228 (70.61%), Query Frame = 1
Query: 14 MPTLVKSTNTSTLFWLNNNTNNNVNVNVITTNNYVTLTRKAPCSRFLARSTEDASEMTAT 73 M T +T+ + +L ++++V + NYV+ RK P R+ RS+ D ++ Sbjct: 1 MATSATTTSAAASTYL---CRHHLSVGRNCSRNYVSFARK-PTGRYSVRSSADEVPSSSA 60 Query: 74 STDQSWEGEGENSPMEMPKGPPSIISALNVEKALRGIGITDVDHYARLGLRRGCTYDQVG 133 +T + EG E S +E+PK P S+ISALNVEKALRGI ITD DHY LGL++GC+YDQV Sbjct: 61 ATTEV-EGTTE-SQIEVPKEPSSLISALNVEKALRGIAITDADHYGILGLKKGCSYDQVK 120 Query: 134 AAYEIQVKELSSQGMDEEQFNKERDLLKESYNILSSEQERRLYDWSLARNSAPERYMWPF 193 +AY+ +++EL +QG+++E+ +K+ DLLKESY+ILSS QERRLYDWSLARN P+RY WPF Sbjct: 121 SAYDQKLEELMNQGLEQEELSKKLDLLKESYSILSSVQERRLYDWSLARNENPDRYAWPF 180 Query: 194 EADITQTPRW-GTPPPQEPEDVGPTTAVGYFLLAWFVFSFILSIALNR 241 E DITQTP TPPPQEPEDV PT VGYF L W + S LS+ALNR Sbjct: 181 EVDITQTPNSPDTPPPQEPEDVEPTRLVGYFFLTWIILSITLSVALNR 222
BLAST of Spo19438.1 vs. UniProtKB/TrEMBL
Match:
A0A0K9R1T8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_116780 PE=4 SV=1)
HSP 1 Score: 475.7 bits (1223), Expect = 3.300e-131
Identity = 239/240 (99.58%), Postives = 240/240 (100.00%), Query Frame = 1
Query: 1 MAVSSTCMPHRELMPTLVKSTNTSTLFWLNNNTNNNVNVNVITTNNYVTLTRKAPCSRFL 60 MAVSSTCMPHRELMPTLVKSTNTSTLFWLNNNTNNNVNVNVITTNNYVTLTRKAPCSRFL Sbjct: 1 MAVSSTCMPHRELMPTLVKSTNTSTLFWLNNNTNNNVNVNVITTNNYVTLTRKAPCSRFL 60 Query: 61 ARSTEDASEMTATSTDQSWEGEGENSPMEMPKGPPSIISALNVEKALRGIGITDVDHYAR 120 ARSTEDASEMTAT+TDQSWEGEGENSPMEMPKGPPSIISALNVEKALRGIGITDVDHYAR Sbjct: 61 ARSTEDASEMTATATDQSWEGEGENSPMEMPKGPPSIISALNVEKALRGIGITDVDHYAR 120 Query: 121 LGLRRGCTYDQVGAAYEIQVKELSSQGMDEEQFNKERDLLKESYNILSSEQERRLYDWSL 180 LGLRRGCTYDQVGAAYEIQVKELSSQGMDEEQFNKERDLLKESYNILSSEQERRLYDWSL Sbjct: 121 LGLRRGCTYDQVGAAYEIQVKELSSQGMDEEQFNKERDLLKESYNILSSEQERRLYDWSL 180 Query: 181 ARNSAPERYMWPFEADITQTPRWGTPPPQEPEDVGPTTAVGYFLLAWFVFSFILSIALNR 240 ARNSAPERYMWPFEADITQTPRWGTPPPQEPEDVGPTTAVGYFLLAWFVFSFILSIALNR Sbjct: 181 ARNSAPERYMWPFEADITQTPRWGTPPPQEPEDVGPTTAVGYFLLAWFVFSFILSIALNR 240
BLAST of Spo19438.1 vs. UniProtKB/TrEMBL
Match:
A0A0J8CVW6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g033980 PE=4 SV=1)
HSP 1 Score: 355.5 bits (911), Expect = 5.000e-95
Identity = 186/245 (75.92%), Postives = 210/245 (85.71%), Query Frame = 1
Query: 1 MAVSST--CMPHRELMPTLVKSTNTSTLFWLNNNTNNNVNVNVITTNNYVTLTRKAPCSR 60 MAVSST CMPHRELMP+LVK TNT+ LF NN N N N+I+TNNYVTLTRK C R Sbjct: 1 MAVSSTTACMPHRELMPSLVKPTNTTILF--NNLKNTNNTSNIISTNNYVTLTRKVTCGR 60 Query: 61 FLARSTEDASEMTATST----DQSWEGEGENSPMEMPKGPPSIISALNVEKALRGIGITD 120 F+A+S+EDASE TAT+T D+SWEG+GE+SPMEMPKGPPS+ISALNVEKALRGI ITD Sbjct: 61 FVAKSSEDASETTATTTTTTTDESWEGDGESSPMEMPKGPPSLISALNVEKALRGIAITD 120 Query: 121 VDHYARLGLRRGCTYDQVGAAYEIQVKELSSQGMDEEQFNKERDLLKESYNILSSEQERR 180 VDHYAR+GLRRGC+YDQVG AY+I+V+ELSSQG+DEE+ NKER+LLKESYNILSSE ERR Sbjct: 121 VDHYARMGLRRGCSYDQVGPAYQIKVQELSSQGLDEEELNKERELLKESYNILSSEVERR 180 Query: 181 LYDWSLARNSAPERYMWPFEADITQTPRWGTPPPQEPEDVGPTTAVGYFLLAWFVFSFIL 240 LYDWSLAR+ AP+RY WPFEADITQTP G PPP+EPEDVGPT AVGYF L W V +F L Sbjct: 181 LYDWSLARSGAPDRYAWPFEADITQTPT-GIPPPREPEDVGPTIAVGYFFLGWLVLAFTL 240
BLAST of Spo19438.1 vs. UniProtKB/TrEMBL
Match:
A0A0D2RTT7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G041100 PE=4 SV=1)
HSP 1 Score: 222.2 bits (565), Expect = 6.600e-55
Identity = 124/223 (55.61%), Postives = 150/223 (67.26%), Query Frame = 1
Query: 18 VKSTNTSTLFWLNNNTNNNVNVNVITTNNYVTLTRKAPCSRFLARSTEDASEMTATSTDQ 77 + +T +TL+ NN + + N +N R RS+ D S T T+ Sbjct: 3 LSTTAATTLYISGNNIHASTPKNASLFSNSTISFSAKQRRRLSIRSSGDVSSETPTT--- 62 Query: 78 SWEGEGENSPMEMPKGPPSIISALNVEKALRGIGITDVDHYARLGLRRGCTYDQVGAAYE 137 E E E S E PKGPPS+ISALNVE+ALRGI ITD DHY RLGL+RGC+Y+QV AY Sbjct: 63 --ETESEKSIDEAPKGPPSLISALNVERALRGIAITDADHYGRLGLQRGCSYEQVTVAYR 122 Query: 138 IQVKELSSQGMDEEQFNKERDLLKESYNILSSEQERRLYDWSLARNSAPERYMWPFEADI 197 +V EL +QG+DEE+ +K+ DLLKESY+ILSS +ERRLYDWSLAR P+RY WPFE DI Sbjct: 123 NKVDELLNQGLDEEELSKKMDLLKESYSILSSVEERRLYDWSLARTEQPDRYAWPFEVDI 182 Query: 198 TQTPRWGTPPPQEPEDVGPTTAVGYFLLAWFVFSFILSIALNR 241 TQTP PPP EPEDVGPT AVGYF+L W + SF+LSIA R Sbjct: 183 TQTPT-EEPPPGEPEDVGPTRAVGYFMLGWLILSFVLSIAFAR 219
BLAST of Spo19438.1 vs. UniProtKB/TrEMBL
Match:
A0A118K0K6_CYNCS (DnaJ domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_020255 PE=4 SV=1)
HSP 1 Score: 218.4 bits (555), Expect = 9.500e-54
Identity = 123/228 (53.95%), Postives = 161/228 (70.61%), Query Frame = 1
Query: 14 MPTLVKSTNTSTLFWLNNNTNNNVNVNVITTNNYVTLTRKAPCSRFLARSTEDASEMTAT 73 M T +T+ + +L ++++V + NYV+ RK P R+ RS+ D ++ Sbjct: 1 MATSATTTSAAASTYL---CRHHLSVGRNCSRNYVSFARK-PTGRYSVRSSADEVPSSSA 60 Query: 74 STDQSWEGEGENSPMEMPKGPPSIISALNVEKALRGIGITDVDHYARLGLRRGCTYDQVG 133 +T + EG E S +E+PK P S+ISALNVEKALRGI ITD DHY LGL++GC+YDQV Sbjct: 61 ATTEV-EGTTE-SQIEVPKEPSSLISALNVEKALRGIAITDADHYGILGLKKGCSYDQVK 120 Query: 134 AAYEIQVKELSSQGMDEEQFNKERDLLKESYNILSSEQERRLYDWSLARNSAPERYMWPF 193 +AY+ +++EL +QG+++E+ +K+ DLLKESY+ILSS QERRLYDWSLARN P+RY WPF Sbjct: 121 SAYDQKLEELMNQGLEQEELSKKLDLLKESYSILSSVQERRLYDWSLARNENPDRYAWPF 180 Query: 194 EADITQTPRW-GTPPPQEPEDVGPTTAVGYFLLAWFVFSFILSIALNR 241 E DITQTP TPPPQEPEDV PT VGYF L W + S LS+ALNR Sbjct: 181 EVDITQTPNSPDTPPPQEPEDVEPTRLVGYFFLTWIILSITLSVALNR 222
BLAST of Spo19438.1 vs. UniProtKB/TrEMBL
Match:
A0A061GKF9_THECC (Chaperone DnaJ-domain superfamily protein OS=Theobroma cacao GN=TCM_037372 PE=4 SV=1)
HSP 1 Score: 218.0 bits (554), Expect = 1.200e-53
Identity = 115/183 (62.84%), Postives = 135/183 (73.77%), Query Frame = 1
Query: 58 RFLARSTEDASEMTATSTDQSWEGEGENSPMEMPKGPPSIISALNVEKALRGIGITDVDH 117 R RS+ D S T + E E E S +E PKGPPS+ISALNVE+ALRGI ITD DH Sbjct: 40 RLSIRSSGDVSSETPAT-----EAESEQS-IEAPKGPPSLISALNVERALRGIAITDADH 99 Query: 118 YARLGLRRGCTYDQVGAAYEIQVKELSSQGMDEEQFNKERDLLKESYNILSSEQERRLYD 177 Y RLGL+R C+Y+QV AY+ +V EL QG+DEE+ +K+ DLLKESY+ILSS +ERR+YD Sbjct: 100 YGRLGLQRKCSYEQVTVAYKNKVDELPKQGLDEEELSKKMDLLKESYSILSSVKERRMYD 159 Query: 178 WSLARNSAPERYMWPFEADITQTPRWGTPPPQEPEDVGPTTAVGYFLLAWFVFSFILSIA 237 WSLAR P RY WPFE DITQTP PPPQEPEDVGPT VGYF+L WF+ S +LSIA Sbjct: 160 WSLARTEEPGRYAWPFEEDITQTPT-QEPPPQEPEDVGPTRLVGYFILGWFILSVVLSIA 215 Query: 238 LNR 241 L R Sbjct: 220 LAR 215
BLAST of Spo19438.1 vs. ExPASy Swiss-Prot
Match:
NDHU_ARATH (NAD(P)H-quinone oxidoreductase subunit U, chloroplastic OS=Arabidopsis thaliana GN=ndhU PE=1 SV=1)
HSP 1 Score: 195.7 bits (496), Expect = 5.900e-49
Identity = 101/183 (55.19%), Postives = 127/183 (69.40%), Query Frame = 1
Query: 58 RFLARSTEDASEMTATSTDQSWEGEGENSPMEMPKGPPSIISALNVEKALRGIGITDVDH 117 R + ++SE++A + EG + E PK PS+ISALNVE+ALRG+ ITDVDH Sbjct: 40 RIICSPARNSSEVSA---EAETEGGSSTAVDEAPKESPSLISALNVERALRGLPITDVDH 99 Query: 118 YARLGLRRGCTYDQVGAAYEIQVKELSSQGMDEEQFNKERDLLKESYNILSSEQERRLYD 177 Y RLG+ R C+YDQV Y+ +VKEL QG+DEEQ + DL+KESY ILS+ +ERR+YD Sbjct: 100 YGRLGIFRNCSYDQVTIGYKERVKELKEQGLDEEQLKTKMDLIKESYTILSTVEERRMYD 159 Query: 178 WSLARNSAPERYMWPFEADITQTPRWGTPPPQEPEDVGPTTAVGYFLLAWFVFSFILSIA 237 WSLAR+ ERY+WPFE DI + P PPPQEPEDVGPT +GYF+ AW V LS+A Sbjct: 160 WSLARSEKAERYVWPFEVDIME-PSREEPPPQEPEDVGPTRILGYFIGAWLVLGVALSVA 218 Query: 238 LNR 241 NR Sbjct: 220 FNR 218
BLAST of Spo19438.1 vs. TAIR (Arabidopsis)
Match:
AT5G21430.1 (Chaperone DnaJ-domain superfamily protein)
HSP 1 Score: 195.7 bits (496), Expect = 3.300e-50
Identity = 101/183 (55.19%), Postives = 127/183 (69.40%), Query Frame = 1
Query: 58 RFLARSTEDASEMTATSTDQSWEGEGENSPMEMPKGPPSIISALNVEKALRGIGITDVDH 117 R + ++SE++A + EG + E PK PS+ISALNVE+ALRG+ ITDVDH Sbjct: 40 RIICSPARNSSEVSA---EAETEGGSSTAVDEAPKESPSLISALNVERALRGLPITDVDH 99 Query: 118 YARLGLRRGCTYDQVGAAYEIQVKELSSQGMDEEQFNKERDLLKESYNILSSEQERRLYD 177 Y RLG+ R C+YDQV Y+ +VKEL QG+DEEQ + DL+KESY ILS+ +ERR+YD Sbjct: 100 YGRLGIFRNCSYDQVTIGYKERVKELKEQGLDEEQLKTKMDLIKESYTILSTVEERRMYD 159 Query: 178 WSLARNSAPERYMWPFEADITQTPRWGTPPPQEPEDVGPTTAVGYFLLAWFVFSFILSIA 237 WSLAR+ ERY+WPFE DI + P PPPQEPEDVGPT +GYF+ AW V LS+A Sbjct: 160 WSLARSEKAERYVWPFEVDIME-PSREEPPPQEPEDVGPTRILGYFIGAWLVLGVALSVA 218 Query: 238 LNR 241 NR Sbjct: 220 FNR 218
The following BLAST results are available for this feature:
BLAST of Spo19438.1 vs. NCBI nr
Analysis Date: 2018-06-29 (
blastp Spinacia oleracea peptides vs. NCBI nr )
Total hits: 5
C T A G C A T G T A C G A A C C A C A A A T T G T A T G G A C A A A A T G A A T C A T T C G G A G A T A G G C C A T T A C T A C A A G C T A G C C A C A A G G T A T T T C T C T C T C T T C C C T C T G A A C C A G T A A C C C C A T C A A C A A C C A A A C T T T G A G A G A G A A G A T C G A A T T A A G G A T G G C A G T G T C T T C G A C A T G C A T G C C T C A C A G G G A G T T G A T G C C A A C A T T A G T T A A A T C C A C A A A T A C T T C A A C C C T T T T T T G G T T G A A T A A C A A T A C T A A T A A T A A T G T T A A T G T T A A T G T T A T T A C C A C T A A T A A T T A T G T T A C T C T T A C A A G A A A G G C C C C C T G T T C G A G G T T T C T A G C A A G G A G C A C T G A G G A T G C T T C G G A G A T G A C G G C A A C A T C A A C G G A C C A G T C A T G G G A A G G A G A A G G A G A A A A C A G T C C A A T G G A A A T G C C T A A A G G A C C T C C T T C T A T C A T C T C T G C C C T T A A C G T T G A A A A G G C T C T T C G T G G C A T T G G A A T T A C G G A T G T G G A C C A T T A T G C T A G G C T G G G A C T T C G A A G A G G A T G C A C C T A T G A T C A G G T T G G A G C T G C A T A C G A G A T T C A A G T C A A G G A A T T A T C C A G C C A A G G G A T G G A C G A G G A A C A A T T T A A C A A A G A G C G T G A T C T T C T T A A G G A A T C G T A C A A T A T A T T A T C T T C T G A A C A A G A A A G A A G G T T A T A T G A T T G G A G C T T G G C G A G G A A C A G C G C A C C T G A G A G A T A T A T G T G G C C G T T C G A G G C C G A C A T A A C A C A A A C T C C T A G A T G G G G T A C T C C T C C T C C A C A G G A A C C T G A A G A T G T C G G A C C T A C A A C A G C T G T G G G A T A T T T C C T A T T A G C C T G G T T T G T A T T C T C T T T C A T A T T A T C C A T T G C T C T C A A C C G A T A G A G C A T C G T T A C G T T A C G T T A C G T T G C T G T G C C G C G T A C T C G C A A A T G T C G A T C T C T C C A T T C A A A T T T T A T T C A T C A T T G C T G G A G T A G T A G T T T T G T A A A T A T G C T T A T A A T G C T T T G T G G A A T T C C T A A A T A T A T T A A T T G A A T A A A T A A A T T A A T A C G G A G T A G T T T A T A C T A C T T C A T A A A T T C C T T C A C A T T A A A C C T T T T A T A T A T C C A A A C T T A A A T A C T T C C T C C G T C T T T T A A T A C T C G C A A C G T T T G G A C T T T T G T C A C T A T T C A T A T A A T C T A C T T T G A C T A T T C G T A G T G T T T T T T A T A T A A G A T A A A 100 200 300 400 500 600 700 800 900 1000 1100 Expect = 4.70e-131 / Id = 99.58 Expect = 7.20e-95 / Id = 75.92 Expect = 6.50e-56 / Id = 65.03 Expect = 9.50e-55 / Id = 55.61 Expect = 1.40e-53 / Id = 53.95 Sequence KNA13470.1 XP_010669327.1 XP_010261937.1 XP_012443363.1 KVI01473.1
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BLAST of Spo19438.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (
blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL )
Total hits: 5
C T A G C A T G T A C G A A C C A C A A A T T G T A T G G A C A A A A T G A A T C A T T C G G A G A T A G G C C A T T A C T A C A A G C T A G C C A C A A G G T A T T T C T C T C T C T T C C C T C T G A A C C A G T A A C C C C A T C A A C A A C C A A A C T T T G A G A G A G A A G A T C G A A T T A A G G A T G G C A G T G T C T T C G A C A T G C A T G C C T C A C A G G G A G T T G A T G C C A A C A T T A G T T A A A T C C A C A A A T A C T T C A A C C C T T T T T T G G T T G A A T A A C A A T A C T A A T A A T A A T G T T A A T G T T A A T G T T A T T A C C A C T A A T A A T T A T G T T A C T C T T A C A A G A A A G G C C C C C T G T T C G A G G T T T C T A G C A A G G A G C A C T G A G G A T G C T T C G G A G A T G A C G G C A A C A T C A A C G G A C C A G T C A T G G G A A G G A G A A G G A G A A A A C A G T C C A A T G G A A A T G C C T A A A G G A C C T C C T T C T A T C A T C T C T G C C C T T A A C G T T G A A A A G G C T C T T C G T G G C A T T G G A A T T A C G G A T G T G G A C C A T T A T G C T A G G C T G G G A C T T C G A A G A G G A T G C A C C T A T G A T C A G G T T G G A G C T G C A T A C G A G A T T C A A G T C A A G G A A T T A T C C A G C C A A G G G A T G G A C G A G G A A C A A T T T A A C A A A G A G C G T G A T C T T C T T A A G G A A T C G T A C A A T A T A T T A T C T T C T G A A C A A G A A A G A A G G T T A T A T G A T T G G A G C T T G G C G A G G A A C A G C G C A C C T G A G A G A T A T A T G T G G C C G T T C G A G G C C G A C A T A A C A C A A A C T C C T A G A T G G G G T A C T C C T C C T C C A C A G G A A C C T G A A G A T G T C G G A C C T A C A A C A G C T G T G G G A T A T T T C C T A T T A G C C T G G T T T G T A T T C T C T T T C A T A T T A T C C A T T G C T C T C A A C C G A T A G A G C A T C G T T A C G T T A C G T T A C G T T G C T G T G C C G C G T A C T C G C A A A T G T C G A T C T C T C C A T T C A A A T T T T A T T C A T C A T T G C T G G A G T A G T A G T T T T G T A A A T A T G C T T A T A A T G C T T T G T G G A A T T C C T A A A T A T A T T A A T T G A A T A A A T A A A T T A A T A C G G A G T A G T T T A T A C T A C T T C A T A A A T T C C T T C A C A T T A A A C C T T T T A T A T A T C C A A A C T T A A A T A C T T C C T C C G T C T T T T A A T A C T C G C A A C G T T T G G A C T T T T G T C A C T A T T C A T A T A A T C T A C T T T G A C T A T T C G T A G T G T T T T T T A T A T A A G A T A A A 100 200 300 400 500 600 700 800 900 1000 1100 Expect = 3.30e-131 / Id = 99.58 Expect = 5.00e-95 / Id = 75.92 Expect = 6.60e-55 / Id = 55.61 Expect = 9.50e-54 / Id = 53.95 Expect = 1.20e-53 / Id = 62.84 Sequence A0A0K9R1T8_SPIOL A0A0J8CVW6_BETVU A0A0D2RTT7_GOSRA A0A118K0K6_CYNCS A0A061GKF9_THECC
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BLAST of Spo19438.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (
blastp Spinacia oleracea peptides vs. ExPASy SwissProt )
Total hits: 1
C T A G C A T G T A C G A A C C A C A A A T T G T A T G G A C A A A A T G A A T C A T T C G G A G A T A G G C C A T T A C T A C A A G C T A G C C A C A A G G T A T T T C T C T C T C T T C C C T C T G A A C C A G T A A C C C C A T C A A C A A C C A A A C T T T G A G A G A G A A G A T C G A A T T A A G G A T G G C A G T G T C T T C G A C A T G C A T G C C T C A C A G G G A G T T G A T G C C A A C A T T A G T T A A A T C C A C A A A T A C T T C A A C C C T T T T T T G G T T G A A T A A C A A T A C T A A T A A T A A T G T T A A T G T T A A T G T T A T T A C C A C T A A T A A T T A T G T T A C T C T T A C A A G A A A G G C C C C C T G T T C G A G G T T T C T A G C A A G G A G C A C T G A G G A T G C T T C G G A G A T G A C G G C A A C A T C A A C G G A C C A G T C A T G G G A A G G A G A A G G A G A A A A C A G T C C A A T G G A A A T G C C T A A A G G A C C T C C T T C T A T C A T C T C T G C C C T T A A C G T T G A A A A G G C T C T T C G T G G C A T T G G A A T T A C G G A T G T G G A C C A T T A T G C T A G G C T G G G A C T T C G A A G A G G A T G C A C C T A T G A T C A G G T T G G A G C T G C A T A C G A G A T T C A A G T C A A G G A A T T A T C C A G C C A A G G G A T G G A C G A G G A A C A A T T T A A C A A A G A G C G T G A T C T T C T T A A G G A A T C G T A C A A T A T A T T A T C T T C T G A A C A A G A A A G A A G G T T A T A T G A T T G G A G C T T G G C G A G G A A C A G C G C A C C T G A G A G A T A T A T G T G G C C G T T C G A G G C C G A C A T A A C A C A A A C T C C T A G A T G G G G T A C T C C T C C T C C A C A G G A A C C T G A A G A T G T C G G A C C T A C A A C A G C T G T G G G A T A T T T C C T A T T A G C C T G G T T T G T A T T C T C T T T C A T A T T A T C C A T T G C T C T C A A C C G A T A G A G C A T C G T T A C G T T A C G T T A C G T T G C T G T G C C G C G T A C T C G C A A A T G T C G A T C T C T C C A T T C A A A T T T T A T T C A T C A T T G C T G G A G T A G T A G T T T T G T A A A T A T G C T T A T A A T G C T T T G T G G A A T T C C T A A A T A T A T T A A T T G A A T A A A T A A A T T A A T A C G G A G T A G T T T A T A C T A C T T C A T A A A T T C C T T C A C A T T A A A C C T T T T A T A T A T C C A A A C T T A A A T A C T T C C T C C G T C T T T T A A T A C T C G C A A C G T T T G G A C T T T T G T C A C T A T T C A T A T A A T C T A C T T T G A C T A T T C G T A G T G T T T T T T A T A T A A G A T A A A 100 200 300 400 500 600 700 800 900 1000 1100 Expect = 5.90e-49 / Id = 55.19 Sequence NDHU_ARATH
Match Name E-value Identity Description
NDHU_ARATH 5.9e-49 55.1 NAD(P)H-quinone oxidoreductase... [more]
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BLAST of Spo19438.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (
blastp Spinacia oleracea peptides vs. TAIR )
Total hits: 1
C T A G C A T G T A C G A A C C A C A A A T T G T A T G G A C A A A A T G A A T C A T T C G G A G A T A G G C C A T T A C T A C A A G C T A G C C A C A A G G T A T T T C T C T C T C T T C C C T C T G A A C C A G T A A C C C C A T C A A C A A C C A A A C T T T G A G A G A G A A G A T C G A A T T A A G G A T G G C A G T G T C T T C G A C A T G C A T G C C T C A C A G G G A G T T G A T G C C A A C A T T A G T T A A A T C C A C A A A T A C T T C A A C C C T T T T T T G G T T G A A T A A C A A T A C T A A T A A T A A T G T T A A T G T T A A T G T T A T T A C C A C T A A T A A T T A T G T T A C T C T T A C A A G A A A G G C C C C C T G T T C G A G G T T T C T A G C A A G G A G C A C T G A G G A T G C T T C G G A G A T G A C G G C A A C A T C A A C G G A C C A G T C A T G G G A A G G A G A A G G A G A A A A C A G T C C A A T G G A A A T G C C T A A A G G A C C T C C T T C T A T C A T C T C T G C C C T T A A C G T T G A A A A G G C T C T T C G T G G C A T T G G A A T T A C G G A T G T G G A C C A T T A T G C T A G G C T G G G A C T T C G A A G A G G A T G C A C C T A T G A T C A G G T T G G A G C T G C A T A C G A G A T T C A A G T C A A G G A A T T A T C C A G C C A A G G G A T G G A C G A G G A A C A A T T T A A C A A A G A G C G T G A T C T T C T T A A G G A A T C G T A C A A T A T A T T A T C T T C T G A A C A A G A A A G A A G G T T A T A T G A T T G G A G C T T G G C G A G G A A C A G C G C A C C T G A G A G A T A T A T G T G G C C G T T C G A G G C C G A C A T A A C A C A A A C T C C T A G A T G G G G T A C T C C T C C T C C A C A G G A A C C T G A A G A T G T C G G A C C T A C A A C A G C T G T G G G A T A T T T C C T A T T A G C C T G G T T T G T A T T C T C T T T C A T A T T A T C C A T T G C T C T C A A C C G A T A G A G C A T C G T T A C G T T A C G T T A C G T T G C T G T G C C G C G T A C T C G C A A A T G T C G A T C T C T C C A T T C A A A T T T T A T T C A T C A T T G C T G G A G T A G T A G T T T T G T A A A T A T G C T T A T A A T G C T T T G T G G A A T T C C T A A A T A T A T T A A T T G A A T A A A T A A A T T A A T A C G G A G T A G T T T A T A C T A C T T C A T A A A T T C C T T C A C A T T A A A C C T T T T A T A T A T C C A A A C T T A A A T A C T T C C T C C G T C T T T T A A T A C T C G C A A C G T T T G G A C T T T T G T C A C T A T T C A T A T A A T C T A C T T T G A C T A T T C G T A G T G T T T T T T A T A T A A G A T A A A 100 200 300 400 500 600 700 800 900 1000 1100 Expect = 3.30e-50 / Id = 55.19 Sequence AT5G21430.1
Match Name E-value Identity Description
AT5G21430.1 3.3e-50 55.1 Chaperone DnaJ-domain superfam... [more]
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