Spo19453 (gene)

Overview
NameSpo19453
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr1 : 34017601 .. 34019857 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACAAAGAGAAGAGATTCTAGTTGCGGGCAAGGAAATAGAAGATTTAACGGTTAGTTGTGCACTTGTGCTTTTACTCTATTCGCCCCCCCTTCCCCTTAATTATTCTTCCTTCCAGTCTCACCTGTGACTCCAGCTGGGTGAGAGCTGAGACTTGGGACAGCCAGCAGTAACTCTTACTGTATTGTATTCTTATCAATTCTACAATAATTGCATGTATCTCTCCTTGTTTTTTGTGAAATATCTTCTGAAACTACCAGTTCTCGGAATTTTTTGCCGTTTGCACCTACAGTTTTATGGTTTATTGTTATATGTTTTACAATATTCTTATATGTTTTTCTGCCTTACTATATTCTTATATTTTTTTTTGCTAAACATGTCCATACTGTTGCATAGACTTTCCTTTCAAGTTTTAACTACCTGTTTAAGAAGGTTATACAAGAGTGATCTGTCTGTGTGTATATGGGTATGACAGTAGGTTGAGACTTTTTAGCTTTCCCCAAGAGTGATCTTTTATGCCATGATTTATGCAGTTGGCTTCATGTAGTTTGGAAAGATTTATGTGCATGCCTTGGTTAGGTTTTGAGAGCCATTGTGACAAAGAATGTTAAACTACAGAAAAACAAATGAGAAAATGTAGCATTGGTTGTACCTTGCAAGTTGCAAAGTACGACCTATTTTTGATGAAAATAACTCTATATATAGTTTGAATCAATGCAAATAGATTTTTTTTGCAAAATAACGATTAGTAGAATCACACACATTTACAACATCTTTAATTATTTTACTACAACAACTCGTGAGAGACTGAAAAGAAGCTAGAAAACATTATAGGTACTATATTGCTTGCTGACATACTTTCACTCTTTACACATTTTGTGCTCTCTAAGACTACCAAAGTAAGCAGCCTACATCTATATGCAGCTATGTGTTCAGAAAGTCCTAACATAATTTGGCACCTTATCTGACATATAAATTACATCACATCAGATTCACCATGACAACTAGTGATGTAAAATGTGCATTGTAAAATGTGAGAAATAGAAACTTGAATATCATTATGGAACAGAGAAGTATGTCATGAGTTGAAATACTATCCCTCATGACAGAAGGAAAGGTTAATATATGAAAATTGGGCTCATTTCAGAGTGCTGAAGGCCTAGAAATGTTGCACTTGTTTTATTCCATTGTTTTCTTGTTTGGAAAAGCTTCTTTGGATAGAGAATGCTGATTCCATCGGTCAAGTGTTGGAGGAGGTTAGAGCTCTTTATGGCCTTCTGATAAACCCCGCAATATCATCTTTTCTCCAAATGCAGCCTATGTTTAGATGTTTATTGCACGTAATTCCCATATTCTTGGGGCCACGAGTTTTGGGAAATATTTGGGGCAAGTATTGTTAAAATAAGGAAAAATGATTAGGTTGAGCTCTGAGAAAATACCAAGGACAGGATTAGAAGGTGTAAAACTGAATATATTCTAATCAATTCTGTCTTTAACACCTTTCTTATGTATGCTAAGAAACAAAGTTGCTTCCTTTGTCAACTTTGAAGGACATTGAAAAAACAGAACTTCTAATAAACCTTTCTTCTTCCTCTAGTGCTCTTTTATATCCGAATACCTTGTGGTAAAGCAACCTTCATATTCATCCACTGTAAGCCAATAACAAGAGTCAATCTATTCATATTTCTTACATTGTAGTCTTTATTTTCTGAAAATCTGAGTCGCTCCATATGATGAATATGACAATTAAATCCAATACTCATATTAAATTAGCAATTTGACCACAAATTGGTTGATAACTAAGATTTTCAATATGAACATACTTTCTTTTGTTTTTTATTTTTTTTTGCCTAAAAAGTACTTTCTTAAAAGTAGTTTGATAATTTGGCTATATTTGGTTACAGGAAACAATGTTCATGCTCAATCTTGGAGACCACAAAGAGTCGAGGAAATTTATTTCGGAACAAAGGGAATACCATGTGAACTTTCCTCCCCTTTTCTTATATGTGAATGCTATAATATTTTCCTTATCTCCAACAGAAAGAAAGGCATTTTTTGTTTGTAAAAGTTTTTTTTATCATTCCCGTAACTTTTTGTCTATTGTTTATAGTTGTGAGGGTTAGTGAGGCTATAAGTTGGAAGTGAAGGTCCTGGAGTAGAGGACAGAAGGTCAGAGGTTCTTGTCCATGCAACCTAAGAACAATATGTTCGCAACATTCGAGTACTACTTTGTACTTTTGAAGGCTCTGAAGTAG

mRNA sequence

ATGAAACAAAGAGAAGAGATTCTAGTTGCGGGCAAGGAAATAGAAGATTTAACGGAAACAATGTTCATGCTCAATCTTGGAGACCACAAAGAGTCGAGGAAATTTATTTCGGAACAAAGGGAATACCATGTGAACTTTCCTCCCCTTTTCTTATATGTGAATGCTATAATATTTTCCTTATCTCCAACAGAAAGAAAGGCATTTTTTAACAATATGTTCGCAACATTCGAGTACTACTTTGTACTTTTGAAGGCTCTGAAGTAG

Coding sequence (CDS)

ATGAAACAAAGAGAAGAGATTCTAGTTGCGGGCAAGGAAATAGAAGATTTAACGGAAACAATGTTCATGCTCAATCTTGGAGACCACAAAGAGTCGAGGAAATTTATTTCGGAACAAAGGGAATACCATGTGAACTTTCCTCCCCTTTTCTTATATGTGAATGCTATAATATTTTCCTTATCTCCAACAGAAAGAAAGGCATTTTTTAACAATATGTTCGCAACATTCGAGTACTACTTTGTACTTTTGAAGGCTCTGAAGTAG

Protein sequence

MKQREEILVAGKEIEDLTETMFMLNLGDHKESRKFISEQREYHVNFPPLFLYVNAIIFSLSPTERKAFFNNMFATFEYYFVLLKALK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo19453.1Spo19453.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo19453.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19453.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19453.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19453.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006364 rRNA processing
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0010155 regulation of proton transport
biological_process GO:0010218 response to far red light
biological_process GO:0009644 response to high light intensity
biological_process GO:0010114 response to red light
biological_process GO:0009744 response to sucrose
biological_process GO:0023014 signal transduction by protein phosphorylation
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0010118 stomatal movement
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006338 chromatin remodeling
biological_process GO:0048608 reproductive structure development
biological_process GO:0007064 mitotic sister chromatid cohesion
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006357 regulation of transcription by RNA polymerase II
biological_process GO:0009902 chloroplast relocation
biological_process GO:0006298 mismatch repair
biological_process GO:0046470 phosphatidylcholine metabolic process
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0016311 dephosphorylation
biological_process GO:0019497 hexachlorocyclohexane metabolic process
biological_process GO:0006771 riboflavin metabolic process
biological_process GO:0009785 blue light signaling pathway
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0000023 maltose metabolic process
biological_process GO:0016556 mRNA modification
biological_process GO:0010362 negative regulation of anion channel activity by blue light
biological_process GO:0050821 protein stabilization
biological_process GO:0010207 photosystem II assembly
biological_process GO:0009638 phototropism
biological_process GO:0042793 plastid transcription
biological_process GO:0016573 histone acetylation
biological_process GO:0006810 transport
biological_process GO:0006629 lipid metabolic process
biological_process GO:0030048 actin filament-based movement
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0071705 nitrogen compound transport
biological_process GO:0006869 lipid transport
biological_process GO:0015917 aminophospholipid transport
biological_process GO:0006812 cation transport
biological_process GO:0045332 phospholipid translocation
biological_process GO:0009827 plant-type cell wall modification
biological_process GO:0009306 protein secretion
biological_process GO:0009860 pollen tube growth
biological_process GO:0070988 demethylation
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0006525 arginine metabolic process
biological_process GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline
biological_process GO:0006560 proline metabolic process
biological_process GO:0046656 folic acid biosynthetic process
biological_process GO:0009626 plant-type hypersensitive response
biological_process GO:0030259 lipid glycosylation
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0048316 seed development
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0009904 chloroplast accumulation movement
biological_process GO:0007018 microtubule-based movement
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0000741 karyogamy
biological_process GO:0051510 regulation of unidimensional cell growth
biological_process GO:0009408 response to heat
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0016043 cellular component organization
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0016036 cellular response to phosphate starvation
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0019375 galactolipid biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006508 proteolysis
biological_process GO:0000160 phosphorelay signal transduction system
biological_process GO:0046856 phosphatidylinositol dephosphorylation
biological_process GO:0006281 DNA repair
biological_process GO:0008152 metabolic process
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0009641 shade avoidance
biological_process GO:0010119 regulation of stomatal movement
biological_process GO:0009585 red, far-red light phototransduction
biological_process GO:0016567 protein ubiquitination
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0010100 negative regulation of photomorphogenesis
biological_process GO:0009649 entrainment of circadian clock
biological_process GO:0046283 anthocyanin-containing compound metabolic process
biological_process GO:0006457 protein folding
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0009966 regulation of signal transduction
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0046488 phosphatidylinositol metabolic process
biological_process GO:0006996 organelle organization
biological_process GO:0007275 multicellular organism development
biological_process GO:0009987 cellular process
biological_process GO:0048856 anatomical structure development
biological_process GO:0007033 vacuole organization
biological_process GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process
biological_process GO:0071805 potassium ion transmembrane transport
biological_process GO:1902171 regulation of tocopherol cyclase activity
biological_process GO:0010286 heat acclimation
biological_process GO:0009647 skotomorphogenesis
biological_process GO:0046786 viral replication complex formation and maintenance
biological_process GO:0006886 intracellular protein transport
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0007264 small GTPase mediated signal transduction
cellular_component GO:0016020 membrane
cellular_component GO:0005737 cytoplasm
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005871 kinesin complex
cellular_component GO:0005874 microtubule
cellular_component GO:0045298 tubulin complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0000785 chromatin
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0005773 vacuole
cellular_component GO:0009536 plastid
cellular_component GO:0005829 cytosol
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0010287 plastoglobule
cellular_component GO:0008278 cohesin complex
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005840 ribosome
cellular_component GO:0009705 plant-type vacuole membrane
cellular_component GO:0009365 protein histidine kinase complex
cellular_component GO:0031011 Ino80 complex
cellular_component GO:0005622 intracellular
cellular_component GO:0000152 nuclear ubiquitin ligase complex
cellular_component GO:0005634 nucleus
cellular_component GO:0016604 nuclear body
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0004518 nuclease activity
molecular_function GO:0008375 acetylglucosaminyltransferase activity
molecular_function GO:0042578 phosphoric ester hydrolase activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0004012 phospholipid-translocating ATPase activity
molecular_function GO:0004326 tetrahydrofolylpolyglutamate synthase activity
molecular_function GO:0030983 mismatched DNA binding
molecular_function GO:0015079 potassium ion transmembrane transporter activity
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0005544 calcium-dependent phospholipid binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0010277 chlorophyllide a oxygenase [overall] activity
molecular_function GO:0018489 vanillate monooxygenase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0031418 L-ascorbic acid binding
molecular_function GO:0070290 N-acylphosphatidylethanolamine-specific phospholipase D activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008289 lipid binding
molecular_function GO:0003777 microtubule motor activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0016853 isomerase activity
molecular_function GO:0005215 transporter activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0051507 beta-sitosterol UDP-glucosyltransferase activity
molecular_function GO:0042802 identical protein binding
molecular_function GO:0004697 protein kinase C activity
molecular_function GO:0000155 phosphorelay sensor kinase activity
molecular_function GO:0010181 FMN binding
molecular_function GO:0009882 blue light photoreceptor activity
molecular_function GO:0008017 microtubule binding
molecular_function GO:0052826 inositol hexakisphosphate 2-phosphatase activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0003993 acid phosphatase activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0016836 hydro-lyase activity
molecular_function GO:0004713 protein tyrosine kinase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0004630 phospholipase D activity
molecular_function GO:0016307 phosphatidylinositol phosphate kinase activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0008194 UDP-glycosyltransferase activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0004656 procollagen-proline 4-dioxygenase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo158740.76Barchart | Table
Spo158750.75Barchart | Table
Spo124160.75Barchart | Table
Spo267950.74Barchart | Table
Spo263880.74Barchart | Table
Spo209600.73Barchart | Table
Spo257310.73Barchart | Table
Spo133140.73Barchart | Table
Spo234630.72Barchart | Table
Spo144450.72Barchart | Table
Spo221590.72Barchart | Table
Spo068650.72Barchart | Table
Spo269740.72Barchart | Table
Spo144460.71Barchart | Table
Spo094500.71Barchart | Table
Spo213450.70Barchart | Table
Spo191740.70Barchart | Table
Spo089820.70Barchart | Table
Spo030920.70Barchart | Table
Spo126570.70Barchart | Table
Spo028200.70Barchart | Table
Spo196680.70Barchart | Table
Spo193150.70Barchart | Table
Spo194520.70Barchart | Table
Spo214940.70Barchart | Table
Spo272680.69Barchart | Table
Spo037310.69Barchart | Table
Spo066630.69Barchart | Table
Spo133340.69Barchart | Table
Spo271980.69Barchart | Table
Spo190690.69Barchart | Table
Spo170110.69Barchart | Table
Spo109720.69Barchart | Table
Spo119720.68Barchart | Table
Spo036490.68Barchart | Table
Spo147520.68Barchart | Table
Spo008190.68Barchart | Table
Spo012890.68Barchart | Table
Spo248010.68Barchart | Table
Spo235640.68Barchart | Table
Spo077800.68Barchart | Table
Spo087530.68Barchart | Table
Spo226680.68Barchart | Table
Spo093050.68Barchart | Table
Spo102340.68Barchart | Table
Spo188730.68Barchart | Table
Spo121120.68Barchart | Table
Spo217910.68Barchart | Table
Spo136400.68Barchart | Table
Spo146550.68Barchart | Table
Spo207830.67Barchart | Table
Spo014710.67Barchart | Table
Spo060320.67Barchart | Table
Spo063580.67Barchart | Table
Spo069030.67Barchart | Table
Spo087900.67Barchart | Table
Spo091110.67Barchart | Table
Spo099160.67Barchart | Table
Spo126540.67Barchart | Table
Spo163450.67Barchart | Table
Spo168610.67Barchart | Table
Spo170440.67Barchart | Table
Spo186180.67Barchart | Table
Spo213160.67Barchart | Table
Spo219990.67Barchart | Table
Spo257960.67Barchart | Table
Spo267030.67Barchart | Table
Spo031910.66Barchart | Table
Spo162170.66Barchart | Table
Spo196130.66Barchart | Table
Spo155280.66Barchart | Table
Spo199400.66Barchart | Table
Spo003140.66Barchart | Table
Spo207880.66Barchart | Table
Spo024640.66Barchart | Table
Spo147510.66Barchart | Table
Spo137490.66Barchart | Table
Spo121340.66Barchart | Table
Spo219670.66Barchart | Table
Spo017220.66Barchart | Table
Spo229210.66Barchart | Table
Spo069340.66Barchart | Table
Spo054900.66Barchart | Table
Spo045140.66Barchart | Table
Spo176110.66Barchart | Table
Spo167000.65Barchart | Table
Spo162230.65Barchart | Table
Spo169190.65Barchart | Table
Spo160120.65Barchart | Table
Spo093030.65Barchart | Table
Spo091790.65Barchart | Table
Spo300180.65Barchart | Table
Spo201970.65Barchart | Table
Spo204180.65Barchart | Table
Spo088840.65Barchart | Table
Spo167690.65Barchart | Table
Spo153320.65Barchart | Table
Spo067830.65Barchart | Table
Spo255880.65Barchart | Table
Spo178560.65Barchart | Table
Spo005000.65Barchart | Table
Spo181150.65Barchart | Table