Spo19532 (gene)

Overview
NameSpo19532
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPentatricopeptide repeat-containing family protein
LocationSpoScf_02989 : 18236 .. 30296 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCTACTTTTCTTGAAGGATAGACTCCACAACTCTAGGTCTGATGTCTGAGGTTTTGAAACTGATATAAGTTGAAAATAGCACCTGTTACTCTTCTATCTTATTACAACTTTTTTTTGAGGGATATAAGTTTTACATCGGGTTTATCATACACTGTGTCTGCATGTTTGGATAGGCCTACATGAGCCTATTTCTGATTTTACAGTAAAACACTAAACAGTCCCCACCCCATGTCCTCATAAACTATCAGAACGCAAAACGTAGTGAATGTAATGTCTTCGTCACACTTTCTGTTAACTTCGATCTATCTCTATGTCTACACTATGTGTTAACTTGTTGATCTATGTCTATGTCCAGGCATATAGGACAGTTGGAATATACAGGTTAGAATATACAGGTTAGATATACCAGGTCATAGTGCATATCTTACCGGGCTTAGCATTATTGGGGGTATGACATTGTTCCCATCTGCTGTTGAGGTAAAACTGAATTTGGGGTTGAATACTCCATTCTCCATTAATTTAGATATTTCCATATGAGTCACAAGGCCCACATCTGTAACAAATGAGGCGGACCTTGTGGCTCATGTGAGTTTGGTTCTGCTCTCTATACAAACCTGCATGTATACCCCTTCCATCCTAAATCGCGTGAGACTTCTAAGAGCTAATGATATTATGACTTAAGCTGAGCCAGTTTTCTATGAAGTTTGAAATCTTTGTCCATGGGAGTATTGAGAGAATTAATCATATTTCCTGTGAGAGTGTGAGTTATAAACTATAATATGATAATACTCAAACATTTTTGCAATTTGCACATGACCCTGCTTGGAGCATTATTAGCCATTGTTTATAATGAATGTTGAATTGAATTTCTGTGGGGTTGAACTGACATGGGATGATTCTTTTGGTGGTGGGGTTGAAGAAGGTCGATTTTTGGTTACTGTGTTTCAGCAAATTATGTGGAGAATAATTATTGGTTAATTTTGTTCAAAATTTTCAAGGGATATTTTTTTAGGGTTGTTTGATAGCTTTGTTATGCTGAAATCATCAGAAATTTCTGAGATTATGTATTTTAATTGATAGTTTGACTGATTTGGTTGGGATTCGAAACTGAAATTCTTGGTTTGGGGGATTTTTTTTCTATTGATAATTTGTTGACTGGAAGTTGTTGGGAATTCCTGGTGTTTAAGATTTTGATTATGGATTTGGTGCTATGCTTTCTGTGGGGAGAATCGTATGGAGTTACATTGATTCTGCAACCAATTTTGGTTGCTGATCATTATGTTGGTCTTGCCTGAAACTACTGGTGATTGCTGCAAGTAAAACTGTACCGATGAGGACAAACTTTCATGTTATTCTACAATTCGATCCAGCATACACTGCTCCACCATGGGTTGTTCTTATTGCAAGCGCCTTTGTGATTTTGACCCTTTGAGCACCGACGCCTATTAGGTTTAGGTACTTTTATAACTGTTCGATCTGTACCTTGGTTTACATGTTATTTATGAAAACATTGTGGTAAATGGTGAAAATTCTGTTTTCAAAATGAAGAATCTGCATTGCCATTATTGCTTTATTTGTACTTTGTTTACCTTGGTTTCTTTAGGTACTTGATAGCCTGAAATGCCTAATTATGATGTAGTTTTTGTTGTCATGGTATTATTGTTTCTATTGATCCCTAATTATTTGTTACACTGAACTAGAATAGAGGGAAATGCGGGACCATTGTTACTGCAGAGTTTGCTGTGGTTGTATTGTTTGCTATGATCATAGTCGTAAATGGTTGTCTGCTTCAAAGGCGGGTCCTGAAAAGTGGATGAAGGTTTGTTTCCTTGATCTTTTATTTGGAATATATAAAGAAGAGAATCGCTTGCTTATTGATTTTCTCTGGGTTTTGCACTTGTGCAATATGAATTTGAGCTAATGTGTTCCGAGTAATTTGAGTAACTGATCATAGTTTCAGCAACAAAGAGTGAAATGTTATGACCTTGAAGTGGTGGATTTAGAACCTTATTAATGGGGGTTTAAATTAATATCAAACTGATTTATTTTACTTATAGTCGTTTCTTTGGCTTTTTTTATTCCTTGATTTTGGGAGTCTCAAGAACTTATAGCAGCAGCTTGCATTATAGTTCCATTCTTGGTGACCTTGTTGAACTTCGTTATATTATGTCTGATCACTACCATTTGAGCTTGGAAACAAATATTTGACATTTTCATTGGAGTCATTACACTGGTTTGTGTATTAACAGGATAAATATGATTGCATGAACAGGCACCACGCAGGGGAGTGCTGCGAGATTAGAAATAGCCCGACTGTGTATATAGTAACCTGCGAATAACGATTAGAAGTTGTAAGCCGAGGGAATCCATCACGATATGAAGGTCAGCTCATATTCTCTTTTTTATTTTTATTTTTATTTTTATATATGTTAGCCATTATTTTCTTTAGTGTGCTCTGATCAGGAACCACCCTACATTGTGGATGAATTAGAATTGGATAGAAAAGAAGTAGCAGTTTGACAAAAGTTTTTAATCTAGGACTTGACTTTGCAAGGTTGGGTTTGTTCACATTTACAAGTTGTATGTGAAAAACAATAATGCCATATGAACAGAGACATTTATATCAAAACTCGATGACTGCCTTCCTATAGTAGTCAGGTGAGGATCCATCATGCCATAGGCTCTCACCGTCAGACCCCTATGTCTTGTCGTCTTAATGTTGTGCCGTTTTCAGTGTGAAGTCTTGGATCTGTAAATGAAAGATTGATTGTCTGCGCCTTAACTCGACAGAAAACTGATGCCAGTTGATGAAGAGAACGCATGGGCAGGAACTGGACAGTGCGATATGTTGATAAGTGTGATAACATCAGCTACATTTGGGTCAGGTTAGGGGGTTGGAGAAGGTAATGGATGAGTCAAAACCTGAAGAAATTGCCGTTAGTACAACTTTCAGTTAGTATCTTTGACTTTTGATGTCACTTCCTGTTATTCAGAATTCAGATCAGCCACCCTTCTGCCCTTGGGCATTAGATCGAATCTTTTGAGGTTCCCGTGTTAGAAAACAAAGGGATCACTGCCACGATAACTACATACTTATCAATATGCAACTGTAATCTCATGGCCGGGATAGTGGGAAAAACTACTAAGGTCAATCTGATGATTACTGTTTGAATTTTCAGGTAAAGTGGAGATTTGGCGCTATTGAAGGTTGTACCAAAATTTATGTAAATAGAACCAGAAAAGGAAAGGAGCACTCCTAGATAATTTTCTTTTCCTTTTAGAAGGAGTAGATTAGAAAATAGAGATAGTTCATGTACACTAATACTCCACGAAGATTACTAAGCATCTAAGCTATTTTTTCTCTTCTTAGATGATCGTCTTTGAAGCTGTGAAGGTATATAAACGTGAACCTTTATGTTCGCCTTCAATGACGTCTGCCTGCAATGAACTATACCGAACACGTCCTTGACTGTTGACAACTTCACATCTTTGTAATAGTTTTCATCCGAATTAATAATAGTGTTTTTTTACATATATTCCAGTAGACCCTAGAGGCTTGGCTTTCTGATTTGATTGATGCATATAAAGTTGTTTAAGGTTTATATTTGCCTTAATAGTAGTTTGCATTTGTTTTCTGTCATCAGCTTGACGTTAGAGGAGACATCTATGGTATTCTAGCTGCACATCCCGTGGCTCTCTTGGTGTCACACTGTCACTGCACCATCTTGTTGGTGCAAGGCCATTGTTTCCAGGTGAAATCAGGTGGACTCTTTAAGAAGGCTGTTGCACACATACAAGGCTGACCCAGGCTTCACCATCCAGCAGAGTTTTTGCTACGGTCATAGTCGTAAATGGTTAGTGAGTCTTCCTCGTAAAGTCTTTTCTTATAGTTCTATGCAATTTTTCTATGCTATTTTATTAGTTGGTTATTGCGTGTTTAGTTAATCATGTCTCATTATCCATGTTGTTGTCATGAATTTAGAGTTCTAATGTATCTATGACATGAACTAAAAACCACTTCAAGTCTGTTGGCTGTGGAACTTGTACATTAGTGGTTGGAAAAGAAGCCAGTAAATAGCCTATTACTTTTCTAGATCGATTATCACATATACTTTATCCAGCAAATAATATACCACCATCTGTTGTATAAGGTTAGATATCGCTTGGTAAGTAAAAGTAGATTTAGTAATTCGGGTATATACCGTATATGCATTGGTTTAGTGGTAGAGCATGCTAAAAAAAAGGTATCTTTGGTAAAAGCATAATATAATGATATGATAAAAGGCTTGGTTATATGTGTTAGGATTGGGTTGGTTACTCTCAATAAATTGAATCAGATTAAATTTTGCTAGCTTAAAGTGTGAGTTGTTCCAGATTCTTTCCTCTGTTTTGTGGTTCTACTAATTGGGATATTGTAGATAGGAAGAAAACTGGGACTGAAGGAAATTTGTATCTGTCTATTCTGTTTCGATTCCATCTCCACGTGGAAATATAATTTAGTTATACGAAGTATTAGTTATTGTGTTTTGGTCTTTGGTAGGTATATTTGTTGATATAATTGATGTTATGGTCTTATCAACCATAGCTCGTTAGTAGCCTATACTAACCTTGGACTTCTTTGTAGCTCCTACTTCTTAAATCTCAATACACTGTAGAATTGTAGCACGTTAGTCTATAATACAGAGGGACCTAAAAGAGAATGACAACAACTGGGGTCTATGCGTCTATCCAAATGAATGGGCCACGATAAAACACATTATTGAAGCTCTTGTGGAGTCTGGCTCCAGGAAGCCTATCTCATGCTAGAATATATATATATATATATATATATATATATATATATATATATATATATACCACTGAACTTGTTACTTGTCAACTGGTTGGTGTTTATACCAAAACCAAGTTGCTAGATTATGGTACGTGACATAAAATTATGTTGCATAGTGATATTCAACTGTTTTCCAGTAAAGGGGTCGGTCTTAGGGAAATTAGAATAGACTCTATGCGGCCACAGGTTTACAGTTATTACCGTAGTATTCTATCAGAAATAAAAGAAACAGTTGAAAGTGTATCGTTTCCTTTTTTCTGCGCTCGTGTTTTAGCTGCTGAGCTAGATAATGCCTTATCAGTTTATCGTCTCCCAATCCTGCCCTTGTAGAGCAAAGTAAGTGCACCAGGTTTTGTGATTTACTGCCCTTACTATGGCAGACCCGGAAGGTGCAACTGTGCAAGTGAAACGAGATGCCATCACTTATTTTACCTTTGGAAAATATCACTTTAATTTAATAGGTGAGAATTAATAATGATAGAAGCAGTTCAAAAACCAGGCTGTCTTTCCTCGAGTCTGATGGTAATAATCTATTAGTTTCACTTCCCTTACACAAGGGAGACTGCCCTATCCAGCCTGCACAGTGATAATTGTGTGAAGAAAACCCCATGGTTGTTCTTGCAGCCGTTAAAATCTCCATTCTTCAGTAGAGAAGGTCGACATTATAAACATTCAGACCTCGAACTCTACTCGTTATCTACATGTCATTGCCTTTAGTTAGTTCACTCCTTTGGCCTTTGTCCCTTTTATGATTGTCTTTTTGGTTAATTTCTATGCAAGTGTTTGTTGTTCTTGTTAATTTGTGGCAATTGTTTGATTCTTCTCTTGTTATAAATGAAAGACCTTTTAGGCTTGAATGTTGATTTGTATGACAATTTGATGTTTGAATAATGAGAAGAAATAATTAAAGAAATTAAAAACACACACAAAGATTTAAGGTGGTTCACTCTTCAATGAGCTACATCCACCATGGGGGAGGGTTTGGAGCTTGTATTACTCTTCAATGGAGAAAGGATTACAAAGAGGAATTCTCAAAGGTGAAGAAGAGAGAATTCTATGTATGCTTAGATCTAGAGTTTCAACCTCACTTGTGTTTCTCTCTCTTAATTCTGAAAATCTCATTACATTTGTTATTTATAGTGTTAGACATCAAACCAATCTAAGGGACAAGAAAAGGCCACGTCGATTGTACTGTGCGGAGAAGAAAACAGATTACCCGCAGAGTTCGGTCGAACCTTCAAAGGGTTCGGCCGAACCAAGGTCAGGTTCGGCCGAACTTACCAAAAAGTTCGGACGAACCTCCAAAAACATAGTTCCTGATTCTCTTCAGGTTCGGCCGAACTTCCAGTAGGTTCGGCCGAACTTATCCAAAGTTCGGGCGAACCTCCAAAATCACAGCTACTGACTTCAGGTTTGGCCGAACCACCTAATAGTTCGGCCGAACTTCCAGCAGGTTCGGCCGAACTTCCAGCAGGTTCGGCCGAACTTCCCCTGCTGCATGACAGCTTCTCGTAAAACAGTCATAACTCCCTCATTTCTCATCCAAAATGAGCTTATGACCAGGCGTTGGAAAGCTATTGCGCCAAGCTTTCACCTCCAACTTGAATCAACTCAATCTAATGAGTAGATCATGAGATATGTCCATTTGAAGTCAGACCTTCCACTATAACACCCTAACATCCTTCAAGGAAGATTCGAGGCACACATAACAATTCTCCACCTTGACTTGAATCCTCCACACTTCCTCATAATGTAATACCAAACTATACTCCAAACACACTCCCAACAAGCCCTTATGGGCTTACATCGACCATGGAGAAAGACCAACTAAGTCCACACACAAAGTGAACTTAGTTGTCGGCAAAGGCTTTGTCAACATGTCGGCGGGATTCTCCTCGGTACCAATCTTCTTCAAGAGCAATTCTTTCTTAGCTATCACATCTCGAACGAAGTTGTACTTGATGTCATTGTAGAATGTGTTTTGATTCTTAGCCAAATGTATGGCACTTTGACTATCACAAAACACGGACACCAAGCTTGAACATGGACTAAACTCTCCCACTAGACCCTTGAGCCACTTTGCTTCTTTGAATGCTTCGGTAATGGCCATAAACTCGGCCTCCGTAGTTGAAAGAGCTACAACATCTTGTAGCGTTGATTGCCAACTCACGGCCGTACCACCTAAAGTAAAGACATAGCCGGAAGTAGATTTCCGGTCATCCAAATCACCTCCATAATCCGAATCACAAAACCCCTCAAGCCCGTTTGCATTTCTACCAAACTCAAGGCAAACGTTTGAGGTACCCTTCAAGTACCTCAACAACCACTTCACGGCTTCCCAATGGACCTTTCCCGGTCTTGACATATACCGACTAACCATACTCACCGCATGCGCTATATCCGGTCTTGAACACACCATGGCATACATCACACTTCCAACCGCACTAGTGTATGGAATGTGAGCCATGGACTTTTCTTCTTCCTTGGATTGAGGACTAAGCTCCTTTGAGAGCTTAAAGTGAGAACTCAATGGAGTGGAAACGGGTTTTGCATGCACCATGGAGAAGCGCTCAAGCACCTTCTCAATGTATCTCTTTTGACTAAGATACAAAACACCCGCATTCCTATCACGAATAATCTCCATACCAAGAATCTTCTTGGCTTCACCAAGATCTTTCATATCAAACTCATTTGCCAACAACTTTTTCAAGTTGTCAATCTCAATCATATTCTTGCAAGCCACCAATATATCATCTACATATAAGAGCAAGTAGATGAAGGAACCACTCACAAGTTCTTTGTAATAGGCACAACTATCATAAGAGCTCCTTGTGAAATCATGTGCCAACATGAACGAATCAAATCGTTTATACCATTGCCTTGGAGATTGCTTCAAGCCATACAAGGACTTTAAAAGATGACACACATGATTTTCCTTCCCTTTCTCCTCAAAACCTTCCGGTTGCTTCATGTAGATCTCCTCCTCCAAATCCCCATGGAGGAATGCGGTCTTCACATCAAGTTGGTGTAACTCCAAGTCTTCCATAGCTACCAAGGCAAGCAACACCCTTATGGATGAGTGTTTCACAACCGGAGAAAATACTTCATGAAAGTCAACGCCTTCAATTTGTGTGAAACCTCTTGCAACAACTCTTGCCTTGTAGACGGGACCGCCCGATTCCGGTGTACCTTCCTTCTTCTTGTACACCCACTTGCACCCAACAATTCTTTTGCCTTTCGGTGCAAGCATAAGCTCCAAGTATTGTTCTTGTGCAAGGACTCCATTTCTTGCTCCATGGCCATCAACCACTTGCCGGCATCATTTATTGACATTGCTTCCTTGAATGAACAAGGATCATCATTATCGGTCTCCACTTGACTTGCAACGGAGAGAGCATATTGAACATAATCACACTCCTCAATGTATCTACTTGGAGGCTTGATTGGTCTCTTTGCTCTTTCTTCGGCAATAGATTTCTTTTGAGCTTGTGGTGTCGCTTCACGAGGTCTCCTTGATGAGGGACCATCTTCATGTGAATGCTCATCTAGCTCCACCTCCTCCTCGGTATCATGGTGTGAACCTACATCATTGCAAATAGAAAGCTTCTTTCCCGGAGTGATCATACAATTTTCATCAAAAACAATATCTCTAGAAGTTATGACTCTTCTAGATTGGTTACACCATACTCTATAACCTTTAACTCCTAAACCATAGCCAACAAAAATACATTTTTTAGCTCTAGGTTCAAGTTTACCATCACTAATATGAATATAAGCCGGACAACCAAATACTCTCAAACTAGAATAATCAACGGGTTTTCCGTACCATACCTCAAGAGGTGACTTGAAGTCAAGAGCCGAGTGAGGAGAGCGATTCACCAAGTAACAAGCCGTTACGTTGAAACGGCTTCCGCCCAAAAAGATTTCCCCAAATTTGCTTGTGAAAGCATATATCTAGCCCTCTCTAAGAGAGTTCTATTCATTCGCTCCACAACCCCATTTTGTTGAGGTCTACCCGCACAAGTTCGATGCCGCACAATGCCATGCTTGAGACAATACTTCAAGAACTTCTTCTCTACAAACTCTAGACCATTATCGGTACTCAAGGTTTTGATCTTTTTTTCGGTCTTCTTTTCAATCATGGTCTTCCAATCATGGAACACATCAAAGACATCATCTTTATGCTTTATAAAGAACACCCAAACCTTCCTAGAGAAGTCATCAATTATAGTGAGCAAATAATTACAACCACCAATCGAAGGAACTCTAGAGGGTCCCCACAAATCCGAATGGATGTATTCAAGTATCCCTTTGGTGTTGTGTACCGCGGGTTTGAAGCTAACCCTCTTGTGTTTACCAAACACACAATGCTCACAAAAGCCAAGGCTTCCAAGCTTCAAGCTTCCAAAACAACCTTGCTTGCTAAGCTCCGACATACCATGCTCCCCCATATGACCAAGTCTCAAATGCCATAACTTGGTTTCACTATCACTCATAGTACTTGTGGAAACATTTGCCGAGCCTACCATGGTGGATCCTTGCAATGAGTACAAGCTACCCACTTTGGCACCCTTCATCAACACAAGAGCACCTTTCACAACCTTCATTACTCCACCTTCCGCTATGCACTTACAACCGTTAGTGTCAAGAGTGCCAAGAGAGATCAAATTCTTCTTTAGCTCCGGAACATGACGAACTTTAGTTAAGGTTCTCACAATACCATCAAACATTTTGATGGCTACCGTCCCAATTCCAATCACCTTGCACGTTGCATTGTTTCCCATGGTGACATTACCTCCATTATACTCCTCATAGGAGCTAAAGAGATCCTTGTTGGGGGTCATATGAAACGAGCAACCCGAATCCAAAATCCATTCATCCTTACCCTTGATTCTTCCATGAGTGGCAACCAATGCACCACTATCACTATCGGTATCTACATAGCTAGCCTCGGCGGTAGCATGAGGTTCTTTGCCCTTTCCGGACTTACCATCACCTCCCGATTGTTTCTTTTGCCACTTCCAACATTCCGACTTAATGTGGCCTTTAATGTGACAATAATTGCAAGACTTGTTACGGTTAGGATTCGGTTTCTTTGACTTGGACCGACCCCTATTCTTTCCCCCATTGCCACCATTACTAGTAGAAGTCTTCTCATGATTTCTACCCCTCACAAACAAGCCATCATTGGAGTTATTTGATGATTTAGAAATTAATTGATTATCAATTAAGTCCCTTTGGGTCAAAGCATCTCTAACATCATCAATACTCAAATCATCTCTACCATACAAGATAGTTTGACGAAAATGTTTATAGGATGGTGGTAATGAACATAACAAGTAAATTGCAAGATCCTCATCATCTAAAACAACATCAATATTTTGAAGATCCATAACAATCGAAAAGAACTCATCTAAATGAGACTTAAGAGAATTACCTTCCTCAAGCCGAAGATCATAGAGTCTACTCTTGAGTAGTAGACGATTGGTGACACTTTTAGCCATATAAAGAGCCTCCAACTTCGACCATAGATCATTGGCGGTTTCCTCCTTGGCAACTTCCCTCAATACTTCATTCGAGAGGCAAAGTTGTATAGCCGACAAAGCCTTCAAATCAATCTCCTCCCACTTCTCTTCCGTAATGGTAGTGGGTTTCTTATCCTTCCCTTCAAGAGCCTTGTGCACACCATTTTGTATCAAAATAGCTTTCATTTTCAATTGCCAAAGGCCAAAGTTAATTGACCTATCAAACTTCTCAATATCCAACTTCATTGTTGACATGAGTATTCAATACTCTCAAGAAATCAAATAAACAACCCAAACACAACCTTAGCTCTGATACCAATTGTTATAAATGAAGGACCTTTTAGGCTTGAATGTTGATTTGTATGACAATTTGATGTTTGAATAATGAGAAGAAATAATTAAAGAAATTAAAAACACACACAAAGATTTAAGGTGGTTCACTCTTCAATGAGCTATATCCACCATGGGGGAGGGTTTGGAGCTTGTATTACTCTTCAATGGAGAAAGGATTACAAAGAGGAATTCTCAAAGGTGAAGAAGAGAGAATTCTATGTATGCTTAGATCTAGGGTTTCAACCTCACTTGTGTTTCTCTCTCTTAATTCTGAAAATCTCATTACATTTGTTATTTATAGTGTTAGACAACAAACCAATCTAAGGGACAAGAAAAGGCCACGTCGATTGTACTGTGCGGAGAAGAAAACAGATTACCCGCAGAGTTCGGTCGAACCTTCAAAGGGTTCGGCCGAACTTACCAAAAAGTTCGGACGAACCTCCAAAAACATAGTTCCTGATTCTCTTCAGGTTCGGCCGAACTTCCAGTAGGTTCGGCCGAACTTATCCAAAGTTCGGGCGAACCTCCAAAATCACAGCTACTGACTTCAGGTTTGGCCGAACCACCTAATAGTTCGGCCGAACTTCCAGCAGGTTCGGCCGAACTTCCCCTGCTGCATGACAGCTTCTCGTAAAACAGTCATAACTCCCTCATTTCTCATCCAAAATGAGCTTATGACCAGGCGTTGGAAAGCTATTGCGCCAAGCTTTCACCTCCAACTTGAATCAACTCAATCTAATGAGTAGATCATGAGATATGTCCATTTGAAATCAGACCTTCCACTATAACACCCTAGATTCGAGGCACACATAACATCTCTGATTGAAATTCATGTTCTTTTATGATAAATACTAAAAAAAAATACACATGTGCATCTTTTTCTTTTGATTGCATACATTGACTTAGCTGTGATATTCATCGGAACGAAATCAGAGTATGTCTTTTGGTCTACAACCTTCTGTTGTTACCTTTAATTCTTTGATAAAAAAAAGGTTGGGTGAATCAGGTCAGAAAAATGGTTGGAAAGGATGAGAGAGAAGGGAGTTGCTCCCACAGTTGAAACATATAACATTCTTATTGATAATGGTTATGGCAGGAATCAAGTGATTGGTCGTAGTTTCGAGATGCTGGAAAAGTATGGAGAACTATGGTTTGAATTCGCTCTCTTATAAATTGTCTTTGTCTCTACAAATTAAGAAGGTAATCCTGTTGAAGCCGAGGTTTCTTTGGGGGATATGTTGGGAATGGGGGTTCTACCAAATGCACATCTATACAAGTTGATTTCCGCTAACATAGTGCCAACATTGGTTACTTATAATACTCTTATTATCGGGTTATGCAAGAATGGGGAATTACAGGAAAGCTGA

mRNA sequence

ATGGCCCTACTTTTCTTGAAGGATAGACTCCACAACTCTAGGTTAGATATACCAGGTCATAGTGCATATCTTACCGGGCTTAGCATTATTGGGGGTATGACATTGTTCCCATCTGCTGTTGAGCCATTATTTTCTTTAGTGTGCTCTGATCAGGAACCACCCTACATTGTGGATGAATTAGAATTGGATAGAAAAGAAGTAGCAGTAAAGTGGAGATTTGGCGCTATTGAAGGTTGTACCAAAATTTATATGATCGTCTTTGAAGCTGTGAAGCTTGACGTTAGAGGAGACATCTATGGTATTCTAGCTGCACATCCCGTGGCTCTCTTGGTGTCACACTGTCACTGCACCATCTTGTTGGTGCAAGGCCATTGTTTCCAGGTGAGAATTAATAATGATAGAAGCAGTTCAAAAACCAGGCTGTCTTTCCTCGAGTCTGATGGTAATCCTGTTGAAGCCGAGGTTTCTTTGGGGGATATGTTGGGAATGGGGGTTCTACCAAATGCACATCTATACAAGTTGATTTCCGCTAACATAGTGCCAACATTGGTTACTTATAATACTCTTATTATCGGGTTATGCAAGAATGGGGAATTACAGGAAAGCTGA

Coding sequence (CDS)

ATGGCCCTACTTTTCTTGAAGGATAGACTCCACAACTCTAGGTTAGATATACCAGGTCATAGTGCATATCTTACCGGGCTTAGCATTATTGGGGGTATGACATTGTTCCCATCTGCTGTTGAGCCATTATTTTCTTTAGTGTGCTCTGATCAGGAACCACCCTACATTGTGGATGAATTAGAATTGGATAGAAAAGAAGTAGCAGTAAAGTGGAGATTTGGCGCTATTGAAGGTTGTACCAAAATTTATATGATCGTCTTTGAAGCTGTGAAGCTTGACGTTAGAGGAGACATCTATGGTATTCTAGCTGCACATCCCGTGGCTCTCTTGGTGTCACACTGTCACTGCACCATCTTGTTGGTGCAAGGCCATTGTTTCCAGGTGAGAATTAATAATGATAGAAGCAGTTCAAAAACCAGGCTGTCTTTCCTCGAGTCTGATGGTAATCCTGTTGAAGCCGAGGTTTCTTTGGGGGATATGTTGGGAATGGGGGTTCTACCAAATGCACATCTATACAAGTTGATTTCCGCTAACATAGTGCCAACATTGGTTACTTATAATACTCTTATTATCGGGTTATGCAAGAATGGGGAATTACAGGAAAGCTGA

Protein sequence

MALLFLKDRLHNSRLDIPGHSAYLTGLSIIGGMTLFPSAVEPLFSLVCSDQEPPYIVDELELDRKEVAVKWRFGAIEGCTKIYMIVFEAVKLDVRGDIYGILAAHPVALLVSHCHCTILLVQGHCFQVRINNDRSSSKTRLSFLESDGNPVEAEVSLGDMLGMGVLPNAHLYKLISANIVPTLVTYNTLIIGLCKNGELQES
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo19532.1Spo19532.1mRNA


Homology
[Close]
BLAST of Spo19532.1 vs. NCBI nr
Match: gi|902221717|gb|KNA18980.1| (hypothetical protein SOVF_065810 [Spinacia oleracea])

HSP 1 Score: 84.7 bits (208), Expect = 2.000e-13
Identity = 38/40 (95.00%), Postives = 40/40 (100.00%), Query Frame = 1 

		  

Query: 90  VKLDVRGDIYGILAAHPVALLVSHCHCTILLVQGHCFQVR 130
           +KLDVRGDIYGILAAHPVALLVSHCHCTILLVQGHCFQV+
Sbjct: 1   MKLDVRGDIYGILAAHPVALLVSHCHCTILLVQGHCFQVK 40
[Close]
BLAST of Spo19532.1 vs. NCBI nr
Match: gi|902091485|gb|KNA03342.1| (hypothetical protein SOVF_210080 [Spinacia oleracea])

HSP 1 Score: 75.5 bits (184), Expect = 1.200e-10
Identity = 41/83 (49.40%), Postives = 51/83 (61.45%), Query Frame = 1 

		  

Query: 141 LSFLESDGNPVEAEVSLGDMLGMGVLPNAHLYKLISA---------------------NI 200
           ++ L  +G  VEAEV  GDM+G GVLPNAH+Y +I A                     N+
Sbjct: 430 INSLCKEGKLVEAEVCFGDMVGRGVLPNAHIYNMIIAGQFDAGNLPAALGLFDEMLRNNV 489

Query: 201 VPTLVTYNTLIIGLCKNGELQES 203
           VPTLVTYNTLI GLCKNG+LQ++
Sbjct: 490 VPTLVTYNTLISGLCKNGKLQKA 512
[Close]
BLAST of Spo19532.1 vs. NCBI nr
Match: gi|731361153|ref|XP_010692200.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g12100, mitochondrial isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 71.2 bits (173), Expect = 2.300e-9
Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = 1 

		  

Query: 141 LSFLESDGNPVEAEVSLGDMLGMGVLPNAHLYKLISA---------------------NI 200
           ++ L  DG  +EA+++LGDM+G GVLPNA +Y +I A                     N+
Sbjct: 496 INSLCKDGKLLEAQIALGDMVGRGVLPNAQIYNMIIAGQCNAGKFQAAFGLYHEMLRNNV 555

Query: 201 VPTLVTYNTLIIGLCKNGELQES 203
           VPTLVTYN+LI GLCK G+LQE+
Sbjct: 556 VPTLVTYNSLISGLCKKGKLQEA 578
[Close]
BLAST of Spo19532.1 vs. NCBI nr
Match: gi|731361155|ref|XP_010692201.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g12100, mitochondrial isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 71.2 bits (173), Expect = 2.300e-9
Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = 1 

		  

Query: 141 LSFLESDGNPVEAEVSLGDMLGMGVLPNAHLYKLISA---------------------NI 200
           ++ L  DG  +EA+++LGDM+G GVLPNA +Y +I A                     N+
Sbjct: 496 INSLCKDGKLLEAQIALGDMVGRGVLPNAQIYNMIIAGQCNAGKFQAAFGLYHEMLRNNV 555

Query: 201 VPTLVTYNTLIIGLCKNGELQES 203
           VPTLVTYN+LI GLCK G+LQE+
Sbjct: 556 VPTLVTYNSLISGLCKKGKLQEA 578
[Close]
BLAST of Spo19532.1 vs. NCBI nr
Match: gi|902163658|gb|KNA06866.1| (hypothetical protein SOVF_177140 [Spinacia oleracea])

HSP 1 Score: 70.5 bits (171), Expect = 3.900e-9
Identity = 40/85 (47.06%), Postives = 51/85 (60.00%), Query Frame = 1 

		  

Query: 139 TRLSFLESDGNPVEAEVSLGDMLGMGVLPNAHLYKLISA--------------------- 198
           T ++ L  +G  +EAEV L DM+G GVLPNA +Y +I A                     
Sbjct: 423 TLINSLCKEGKLLEAEVCLRDMVGRGVLPNAQIYNMIIAGQFDAGNLPAALGLFDEMLRN 482

Query: 199 NIVPTLVTYNTLIIGLCKNGELQES 203
           N+VPTLVTYN+LI GLCKNG+LQE+
Sbjct: 483 NVVPTLVTYNSLINGLCKNGKLQEA 507
[Close]
BLAST of Spo19532.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RHM5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_065810 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.400e-13
Identity = 38/40 (95.00%), Postives = 40/40 (100.00%), Query Frame = 1 

		  

Query: 90  VKLDVRGDIYGILAAHPVALLVSHCHCTILLVQGHCFQVR 130
           +KLDVRGDIYGILAAHPVALLVSHCHCTILLVQGHCFQV+
Sbjct: 1   MKLDVRGDIYGILAAHPVALLVSHCHCTILLVQGHCFQVK 40
[Close]
BLAST of Spo19532.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q7U5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_210080 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.400e-11
Identity = 41/83 (49.40%), Postives = 51/83 (61.45%), Query Frame = 1 

		  

Query: 141 LSFLESDGNPVEAEVSLGDMLGMGVLPNAHLYKLISA---------------------NI 200
           ++ L  +G  VEAEV  GDM+G GVLPNAH+Y +I A                     N+
Sbjct: 430 INSLCKEGKLVEAEVCFGDMVGRGVLPNAHIYNMIIAGQFDAGNLPAALGLFDEMLRNNV 489

Query: 201 VPTLVTYNTLIIGLCKNGELQES 203
           VPTLVTYNTLI GLCKNG+LQ++
Sbjct: 490 VPTLVTYNTLISGLCKNGKLQKA 512
[Close]
BLAST of Spo19532.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BFC0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g018830 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.600e-9
Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = 1 

		  

Query: 141 LSFLESDGNPVEAEVSLGDMLGMGVLPNAHLYKLISA---------------------NI 200
           ++ L  DG  +EA+++LGDM+G GVLPNA +Y +I A                     N+
Sbjct: 496 INSLCKDGKLLEAQIALGDMVGRGVLPNAQIYNMIIAGQCNAGKFQAAFGLYHEMLRNNV 555

Query: 201 VPTLVTYNTLIIGLCKNGELQES 203
           VPTLVTYN+LI GLCK G+LQE+
Sbjct: 556 VPTLVTYNSLISGLCKKGKLQEA 578
[Close]
BLAST of Spo19532.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJW9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_177140 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.700e-9
Identity = 40/85 (47.06%), Postives = 51/85 (60.00%), Query Frame = 1 

		  

Query: 139 TRLSFLESDGNPVEAEVSLGDMLGMGVLPNAHLYKLISA--------------------- 198
           T ++ L  +G  +EAEV L DM+G GVLPNA +Y +I A                     
Sbjct: 423 TLINSLCKEGKLLEAEVCLRDMVGRGVLPNAQIYNMIIAGQFDAGNLPAALGLFDEMLRN 482

Query: 199 NIVPTLVTYNTLIIGLCKNGELQES 203
           N+VPTLVTYN+LI GLCKNG+LQE+
Sbjct: 483 NVVPTLVTYNSLINGLCKNGKLQEA 507
[Close]
BLAST of Spo19532.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QEA9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_194190 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.300e-8
Identity = 37/83 (44.58%), Postives = 52/83 (62.65%), Query Frame = 1 

		  

Query: 141 LSFLESDGNPVEAEVSLGDMLGMGVLPNAHLYKLISA---------------------NI 200
           ++ L  +G  +EAEVSL DM+G GVLPNAH+Y +I A                     ++
Sbjct: 302 INSLCKEGKLLEAEVSLRDMVGRGVLPNAHVYNMIIAGQCNAGNLPAALGLFDEMLRNSV 361

Query: 201 VPTLVTYNTLIIGLCKNGELQES 203
           +PTLVTYN+LI GLCK+G++QE+
Sbjct: 362 LPTLVTYNSLINGLCKHGKIQEA 384
[Close]
BLAST of Spo19532.1 vs. TAIR (Arabidopsis)
Match: AT5G55960.1 (unknown protein)

HSP 1 Score: 48.9 bits (115), Expect = 4.300e-6
Identity = 22/26 (84.62%), Postives = 25/26 (96.15%), Query Frame = 1 

		  

Query: 16  DIPGHSAYLTGLSIIGGMTLFPSAVE 42
           DIPG +AYLTGLSIIGG+TLFPSA+E
Sbjct: 592 DIPGSNAYLTGLSIIGGVTLFPSALE 617
The following BLAST results are available for this feature:
BLAST of Spo19532.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902221717|gb|KNA18980.1|2.0e-1395.0hypothetical protein SOVF_0658... [more]
gi|902091485|gb|KNA03342.1|1.2e-1049.4hypothetical protein SOVF_2100... [more]
gi|731361153|ref|XP_010692200.1|2.3e-945.7PREDICTED: pentatricopeptide r... [more]
gi|731361155|ref|XP_010692201.1|2.3e-945.7PREDICTED: pentatricopeptide r... [more]
gi|902163658|gb|KNA06866.1|3.9e-947.0hypothetical protein SOVF_1771... [more]
back to top
BLAST of Spo19532.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RHM5_SPIOL1.4e-1395.0Uncharacterized protein OS=Spi... [more]
A0A0K9Q7U5_SPIOL8.4e-1149.4Uncharacterized protein OS=Spi... [more]
A0A0J8BFC0_BETVU1.6e-945.7Uncharacterized protein OS=Bet... [more]
A0A0K9QJW9_SPIOL2.7e-947.0Uncharacterized protein OS=Spi... [more]
A0A0K9QEA9_SPIOL1.3e-844.5Uncharacterized protein OS=Spi... [more]
back to top
BLAST of Spo19532.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo19532.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G55960.14.3e-684.6unknown protein[more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 178..201
score: 5.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 184..201
score: 6.

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0009736 cytokinin-activated signaling pathway
biological_process GO:0006352 DNA-templated transcription, initiation
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0007165 signal transduction
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0006366 transcription by RNA polymerase II
biological_process GO:0006810 transport
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0051301 cell division
biological_process GO:0048825 cotyledon development
biological_process GO:0006281 DNA repair
biological_process GO:0009880 embryonic pattern specification
biological_process GO:0019915 lipid storage
biological_process GO:0010100 negative regulation of photomorphogenesis
biological_process GO:0006487 protein N-linked glycosylation
biological_process GO:0009845 seed germination
biological_process GO:0016567 protein ubiquitination
biological_process GO:0008152 metabolic process
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0007062 sister chromatid cohesion
biological_process GO:0048575 short-day photoperiodism, flowering
biological_process GO:0010162 seed dormancy process
biological_process GO:0010072 primary shoot apical meristem specification
biological_process GO:0006396 RNA processing
biological_process GO:0050826 response to freezing
biological_process GO:0009909 regulation of flower development
biological_process GO:0045595 regulation of cell differentiation
biological_process GO:0010564 regulation of cell cycle process
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0045492 xylan biosynthetic process
biological_process GO:0010104 regulation of ethylene-activated signaling pathway
biological_process GO:0010413 glucuronoxylan metabolic process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006334 nucleosome assembly
biological_process GO:0009816 defense response to bacterium, incompatible interaction
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0046686 response to cadmium ion
biological_process GO:0000186 activation of MAPKK activity
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process GO:0030001 metal ion transport
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0000124 SAGA complex
cellular_component GO:0016592 mediator complex
cellular_component GO:0005634 nucleus
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0005829 cytosol
cellular_component GO:0030127 COPII vesicle coat
cellular_component GO:0000786 nucleosome
cellular_component GO:0000785 chromatin
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016020 membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0000159 protein phosphatase type 2A complex
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
cellular_component GO:0005669 transcription factor TFIID complex
molecular_function GO:0003682 chromatin binding
molecular_function GO:0005515 protein binding
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0019888 protein phosphatase regulator activity
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003712 transcription coregulator activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004709 MAP kinase kinase kinase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0070290 N-acylphosphatidylethanolamine-specific phospholipase D activity
molecular_function GO:0005546 phosphatidylinositol-4,5-bisphosphate binding
molecular_function GO:0004630 phospholipase D activity
molecular_function GO:0005215 transporter activity
molecular_function GO:0000166 nucleotide binding
RNA-Seq Expression