Spo19620 (gene)

Overview
NameSpo19620
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionSolanesyl diphosphate synthase family protein
LocationSpoScf_14885 : 339 .. 801 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAATGAGTTACCAAAATGTGGATTTCGGTCGAATGAGATTTGATTTAATTGCGTGTAGTTGTTCGTCTAATGCTTCATTTGATCGTTTGTTTGCAAAGGGTAGTAATGTAAAGGGTGATGGTAGCAGGAAGAACTTGAGAAAACGTTATGGAGCGCGAAAATTGTTTTGTTTTCGCTCTGGTATCCCCAAATGTAAGGTGTACTCAACCAAGACACCTGAAACTTTACTTAATGGTATGTTCATTCGTTGTTTTATTTAATGTTTGTTGATTTCAAGTATGAATGTCTGATTAATGGTTTACTTTATTTGGTTGTGAATTTGGGTGTCTAATAGGGATTAGTGAAGGTACTTTACCTGTTTTGAATGTGAGGAACGAGTCTAATGACCCAATTTCAATTGCTGAGCTTTTCGAAGTTGTTGCTGATGATCTCCTGACTCTGAACAAGAATTTGCAAGCT

mRNA sequence

ATGTCAATGAGTTACCAAAATGTGGATTTCGGTCGAATGAGATTTGATTTAATTGCGTGTAGTTGTTCGTCTAATGCTTCATTTGATCGTTTGTTTGCAAAGGGTAGTAATGTAAAGGGTGATGGTAGCAGGAAGAACTTGAGAAAACGTTATGGAGCGCGAAAATTGTTTTGTTTTCGCTCTGGTATCCCCAAATGTAAGGTGTACTCAACCAAGACACCTGAAACTTTACTTAATGGGATTAGTGAAGGTACTTTACCTGTTTTGAATGTGAGGAACGAGTCTAATGACCCAATTTCAATTGCTGAGCTTTTCGAAGTTGTTGCTGATGATCTCCTGACTCTGAACAAGAATTTGCAAGCT

Coding sequence (CDS)

ATGTCAATGAGTTACCAAAATGTGGATTTCGGTCGAATGAGATTTGATTTAATTGCGTGTAGTTGTTCGTCTAATGCTTCATTTGATCGTTTGTTTGCAAAGGGTAGTAATGTAAAGGGTGATGGTAGCAGGAAGAACTTGAGAAAACGTTATGGAGCGCGAAAATTGTTTTGTTTTCGCTCTGGTATCCCCAAATGTAAGGTGTACTCAACCAAGACACCTGAAACTTTACTTAATGGGATTAGTGAAGGTACTTTACCTGTTTTGAATGTGAGGAACGAGTCTAATGACCCAATTTCAATTGCTGAGCTTTTCGAAGTTGTTGCTGATGATCTCCTGACTCTGAACAAGAATTTGCAAGCT

Protein sequence

MSMSYQNVDFGRMRFDLIACSCSSNASFDRLFAKGSNVKGDGSRKNLRKRYGARKLFCFRSGIPKCKVYSTKTPETLLNGISEGTLPVLNVRNESNDPISIAELFEVVADDLLTLNKNLQA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo19620.1Spo19620.1mRNA


Homology
[Close]
BLAST of Spo19620.1 vs. NCBI nr
Match: gi|902193840|gb|KNA12387.1| (hypothetical protein SOVF_125890 [Spinacia oleracea])

HSP 1 Score: 242.3 bits (617), Expect = 4.500e-61
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1 

		  

Query: 1   MSMSYQNVDFGRMRFDLIACSCSSNASFDRLFAKGSNVKGDGSRKNLRKRYGARKLFCFR 60
           MSMSYQNVDFGRMRFDLIACSCSSNASFDRLFAKGSNVKGDGSRKNLRKRYGARKLFCFR
Sbjct: 2   MSMSYQNVDFGRMRFDLIACSCSSNASFDRLFAKGSNVKGDGSRKNLRKRYGARKLFCFR 61

Query: 61  SGIPKCKVYSTKTPETLLNGISEGTLPVLNVRNESNDPISIAELFEVVADDLLTLNKNLQ 120
           SGIPKCKVYSTKTPETLLNGISEGTLPVLNVRNESNDPISIAELFEVVADDLLTLNKNLQ
Sbjct: 62  SGIPKCKVYSTKTPETLLNGISEGTLPVLNVRNESNDPISIAELFEVVADDLLTLNKNLQ 121

Query: 121 A 122
           A
Sbjct: 122 A 122
[Close]
BLAST of Spo19620.1 vs. NCBI nr
Match: gi|731346514|ref|XP_010684494.1| (PREDICTED: probable solanesyl-diphosphate synthase 3, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 164.5 bits (415), Expect = 1.200e-37
Identity = 85/120 (70.83%), Postives = 102/120 (85.00%), Query Frame = 1 

		  

Query: 1   MSMSYQNVDFGRMRFDLIACSCSSNASFDRLFAKGSNVKGDGSRKNLRKRYGARKLFCFR 60
           MSM+ QNVDFGRMRFDLIACSCSSNAS +RLFAK S+VK    R+NLRK YG RKLFCFR
Sbjct: 2   MSMTCQNVDFGRMRFDLIACSCSSNASSERLFAK-SDVKS--GRRNLRKGYGGRKLFCFR 61

Query: 61  SGIPKCKVYSTKTPETLLNGISEGTLPVLNVRNESNDPISIAELFEVVADDLLTLNKNLQ 120
           SG  K +VYSTK+PE+ LNG+S+G +PVL+V+ + ++PIS+  LFEVVADDLLTLNKNL+
Sbjct: 62  SGSSKRRVYSTKSPESFLNGMSQGAIPVLDVKEKLSNPISLTSLFEVVADDLLTLNKNLK 118
[Close]
BLAST of Spo19620.1 vs. NCBI nr
Match: gi|388329818|gb|AFK29285.1| (putative solanesyl diphosphate synthase [Salvia miltiorrhiza])

HSP 1 Score: 117.1 bits (292), Expect = 2.200e-23
Identity = 60/121 (49.59%), Postives = 84/121 (69.42%), Query Frame = 1 

		  

Query: 1   MSMSYQNVDFGRMRFDLIACSCSSNASFDRLFAKGSNVKGDGSRKNLRKRYGARKLFCFR 60
           MS++  N++FGR R+D  AC CSSNAS +R+ A+     G G  +N+ +R GAR+L C R
Sbjct: 2   MSLTCSNLEFGRTRWDFAACGCSSNASTNRVTARNC---GKGVLQNVNRRGGARRLRCCR 61

Query: 61  SGIPKCKVYSTKTPETLLNGISEGTLPVLNVRNESNDPISIAELFEVVADDLLTLNKNLQ 120
               +C+V+STKTPE  LNG++ G  PVL++  E     S++ +FEVVA+DLLTLNKNLQ
Sbjct: 62  RDAGRCRVFSTKTPEAFLNGVAAGPPPVLDLAEEEKGLPSMSNMFEVVAEDLLTLNKNLQ 119

Query: 121 A 122
           +
Sbjct: 122 S 119
[Close]
BLAST of Spo19620.1 vs. NCBI nr
Match: gi|661890576|emb|CDP06073.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 117.1 bits (292), Expect = 2.200e-23
Identity = 60/119 (50.42%), Postives = 79/119 (66.39%), Query Frame = 1 

		  

Query: 1   MSMSYQNVDFGRMRFDLIACSCSSNASFDRLFAKGSNVKGDGSRKNLRKRYGARKLFCFR 60
           MSM+  N++F R R D +AC C S++SFDRL  K S     G  +++ + Y ARKL C R
Sbjct: 1   MSMTCHNLEFVRTRLDFVACGCFSSSSFDRLHVKDSK---KGLLRSVHRGYKARKLQCCR 60

Query: 61  SGIPKCKVYSTKTPETLLNGISEGTLPVLNVRNESNDPISIAELFEVVADDLLTLNKNL 120
             + +C+V+STKTPE LL G+  G  P L+++ ES  PIS+  LFE VADDL TLNKNL
Sbjct: 61  RDVGRCRVFSTKTPEALLGGVVPGPPPALDLKRESTSPISLPHLFEAVADDLQTLNKNL 116
[Close]
BLAST of Spo19620.1 vs. NCBI nr
Match: gi|985447929|ref|XP_015385553.1| (PREDICTED: solanesyl diphosphate synthase 2, chloroplastic isoform X1 [Citrus sinensis])

HSP 1 Score: 116.3 bits (290), Expect = 3.700e-23
Identity = 62/121 (51.24%), Postives = 84/121 (69.42%), Query Frame = 1 

		  

Query: 1   MSMSYQNVDFGRMRFDLIACSCSSNASFDRLFAKGSNVKGDGSRKNLRKRYGARKLFCFR 60
           MSM+  N+DFGR   DL+AC CSS+AS  R   +   +   GSRK+ R   GAR+L C R
Sbjct: 5   MSMTSHNLDFGRSVLDLVACGCSSSASIHRSSVR--KIAMTGSRKSNRD-CGARRLVCCR 64

Query: 61  SGIPKCKVYSTKTPETLLNGISEGTLPVLNVRNESNDPISIAELFEVVADDLLTLNKNLQ 120
             + +C+VYSTKTPETLLN + +    VLN++ +S  PIS+A +FEVVA+DL TLN+NL+
Sbjct: 65  QNLARCRVYSTKTPETLLNEVGQIPPAVLNLKEKSRSPISLANIFEVVAEDLQTLNQNLK 122

Query: 121 A 122
           +
Sbjct: 125 S 122
[Close]
BLAST of Spo19620.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QYN9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_125890 PE=3 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 3.100e-61
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1 

		  

Query: 1   MSMSYQNVDFGRMRFDLIACSCSSNASFDRLFAKGSNVKGDGSRKNLRKRYGARKLFCFR 60
           MSMSYQNVDFGRMRFDLIACSCSSNASFDRLFAKGSNVKGDGSRKNLRKRYGARKLFCFR
Sbjct: 2   MSMSYQNVDFGRMRFDLIACSCSSNASFDRLFAKGSNVKGDGSRKNLRKRYGARKLFCFR 61

Query: 61  SGIPKCKVYSTKTPETLLNGISEGTLPVLNVRNESNDPISIAELFEVVADDLLTLNKNLQ 120
           SGIPKCKVYSTKTPETLLNGISEGTLPVLNVRNESNDPISIAELFEVVADDLLTLNKNLQ
Sbjct: 62  SGIPKCKVYSTKTPETLLNGISEGTLPVLNVRNESNDPISIAELFEVVADDLLTLNKNLQ 121

Query: 121 A 122
           A
Sbjct: 122 A 122
[Close]
BLAST of Spo19620.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BWM4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g164490 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 8.200e-38
Identity = 85/120 (70.83%), Postives = 102/120 (85.00%), Query Frame = 1 

		  

Query: 1   MSMSYQNVDFGRMRFDLIACSCSSNASFDRLFAKGSNVKGDGSRKNLRKRYGARKLFCFR 60
           MSM+ QNVDFGRMRFDLIACSCSSNAS +RLFAK S+VK    R+NLRK YG RKLFCFR
Sbjct: 2   MSMTCQNVDFGRMRFDLIACSCSSNASSERLFAK-SDVKS--GRRNLRKGYGGRKLFCFR 61

Query: 61  SGIPKCKVYSTKTPETLLNGISEGTLPVLNVRNESNDPISIAELFEVVADDLLTLNKNLQ 120
           SG  K +VYSTK+PE+ LNG+S+G +PVL+V+ + ++PIS+  LFEVVADDLLTLNKNL+
Sbjct: 62  SGSSKRRVYSTKSPESFLNGMSQGAIPVLDVKEKLSNPISLTSLFEVVADDLLTLNKNLK 118
[Close]
BLAST of Spo19620.1 vs. UniProtKB/TrEMBL
Match: M4H1W7_SALMI (Putative solanesyl diphosphate synthase OS=Salvia miltiorrhiza GN=SPS1 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.500e-23
Identity = 60/121 (49.59%), Postives = 84/121 (69.42%), Query Frame = 1 

		  

Query: 1   MSMSYQNVDFGRMRFDLIACSCSSNASFDRLFAKGSNVKGDGSRKNLRKRYGARKLFCFR 60
           MS++  N++FGR R+D  AC CSSNAS +R+ A+     G G  +N+ +R GAR+L C R
Sbjct: 2   MSLTCSNLEFGRTRWDFAACGCSSNASTNRVTARNC---GKGVLQNVNRRGGARRLRCCR 61

Query: 61  SGIPKCKVYSTKTPETLLNGISEGTLPVLNVRNESNDPISIAELFEVVADDLLTLNKNLQ 120
               +C+V+STKTPE  LNG++ G  PVL++  E     S++ +FEVVA+DLLTLNKNLQ
Sbjct: 62  RDAGRCRVFSTKTPEAFLNGVAAGPPPVLDLAEEEKGLPSMSNMFEVVAEDLLTLNKNLQ 119

Query: 121 A 122
           +
Sbjct: 122 S 119
[Close]
BLAST of Spo19620.1 vs. UniProtKB/TrEMBL
Match: A0A068UEL4_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021432001 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.500e-23
Identity = 60/119 (50.42%), Postives = 79/119 (66.39%), Query Frame = 1 

		  

Query: 1   MSMSYQNVDFGRMRFDLIACSCSSNASFDRLFAKGSNVKGDGSRKNLRKRYGARKLFCFR 60
           MSM+  N++F R R D +AC C S++SFDRL  K S     G  +++ + Y ARKL C R
Sbjct: 1   MSMTCHNLEFVRTRLDFVACGCFSSSSFDRLHVKDSK---KGLLRSVHRGYKARKLQCCR 60

Query: 61  SGIPKCKVYSTKTPETLLNGISEGTLPVLNVRNESNDPISIAELFEVVADDLLTLNKNL 120
             + +C+V+STKTPE LL G+  G  P L+++ ES  PIS+  LFE VADDL TLNKNL
Sbjct: 61  RDVGRCRVFSTKTPEALLGGVVPGPPPALDLKRESTSPISLPHLFEAVADDLQTLNKNL 116
[Close]
BLAST of Spo19620.1 vs. UniProtKB/TrEMBL
Match: B9GGY7_POPTR (Solanesyl diphosphate synthase family protein OS=Populus trichocarpa GN=POPTR_0001s38950g PE=3 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 2.600e-23
Identity = 60/121 (49.59%), Postives = 80/121 (66.12%), Query Frame = 1 

		  

Query: 1   MSMSYQNVDFGRMRFDLIACSCSSNASFDRLFAKGSNVKGDGSRKNLRKRYGARKLFCFR 60
           MSM+  N+DFGR + DL+AC CSSNAS DR   +          K+  + YG+R+L C R
Sbjct: 2   MSMTCHNLDFGRAKLDLVACGCSSNASIDRYSVRNY---AKSVSKSCNRDYGSRRLVCSR 61

Query: 61  SGIPKCKVYSTKTPETLLNGISEGTLPVLNVRNESNDPISIAELFEVVADDLLTLNKNLQ 120
             I +C+V  TKTPETL  G++EG   +L ++ +S + ISI  LFEVVADDL TLN+NLQ
Sbjct: 62  RDIARCRVSPTKTPETLPAGVAEGPAGLLKLKKDSRESISITNLFEVVADDLQTLNQNLQ 119

Query: 121 A 122
           +
Sbjct: 122 S 119
[Close]
BLAST of Spo19620.1 vs. ExPASy Swiss-Prot
Match: SPS2_ARATH (Solanesyl diphosphate synthase 2, chloroplastic OS=Arabidopsis thaliana GN=SPS2 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.500e-8
Identity = 46/120 (38.33%), Postives = 64/120 (53.33%), Query Frame = 1 

		  

Query: 1   MSMSYQNVDFGRMRFDLIACSCSSNASFDRLFAKGSNVKGDGSRKNLRKRYGARKLFCFR 60
           M MS +N+D G    D    SCSS+++  R F  G++ K   +   +  R     L   R
Sbjct: 1   MMMSCRNIDLGTSVLDH---SCSSSST-SRRFLFGNSSK---TVCMIGGRSCVGNLVFLR 60

Query: 61  SGIPKCKVYSTKTPE-TLLNGISEGTLPVLNVRNESNDPISIAELFEVVADDLLTLNKNL 120
             +  C+    K+ E +L+NGI +    +LN+R ES  PIS+  LFEVVADDL  LN NL
Sbjct: 61  RDLATCRAVPAKSKENSLVNGIGQDQTVMLNLRQESRKPISLETLFEVVADDLQRLNDNL 113
[Close]
BLAST of Spo19620.1 vs. ExPASy Swiss-Prot
Match: SPS1_ARATH (Solanesyl diphosphate synthase 1 OS=Arabidopsis thaliana GN=SPS1 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 9.100e-6
Identity = 41/120 (34.17%), Postives = 57/120 (47.50%), Query Frame = 1 

		  

Query: 1   MSMSYQNVDFGRMRFDLIACSCSSNASFDRLFAKGSNVKGDGSRKNLRKRYGARKLFCFR 60
           M  S +N+D G M   ++AC C       R F   +      +  N  + YG        
Sbjct: 1   MMTSCRNIDLGTM---MMACGCGR-----RQFPSLAKTVCKFTSSN--RSYGGL------ 60

Query: 61  SGIPKCKVYSTKTPE-TLLNGISEGTLPVLNVRNESNDPISIAELFEVVADDLLTLNKNL 120
             +  CK   TK+ E +LLNGI +      +++ ES  PIS+  LFE+VA DL TLN NL
Sbjct: 61  --VGSCKAVPTKSKEISLLNGIGQSQTVSFDLKQESKQPISLVTLFELVAVDLQTLNDNL 102
[Close]
BLAST of Spo19620.1 vs. TAIR (Arabidopsis)
Match: AT1G17050.1 (solanesyl diphosphate synthase 2)

HSP 1 Score: 60.5 bits (145), Expect = 8.500e-10
Identity = 46/120 (38.33%), Postives = 64/120 (53.33%), Query Frame = 1 

		  

Query: 1   MSMSYQNVDFGRMRFDLIACSCSSNASFDRLFAKGSNVKGDGSRKNLRKRYGARKLFCFR 60
           M MS +N+D G    D    SCSS+++  R F  G++ K   +   +  R     L   R
Sbjct: 1   MMMSCRNIDLGTSVLDH---SCSSSST-SRRFLFGNSSK---TVCMIGGRSCVGNLVFLR 60

Query: 61  SGIPKCKVYSTKTPE-TLLNGISEGTLPVLNVRNESNDPISIAELFEVVADDLLTLNKNL 120
             +  C+    K+ E +L+NGI +    +LN+R ES  PIS+  LFEVVADDL  LN NL
Sbjct: 61  RDLATCRAVPAKSKENSLVNGIGQDQTVMLNLRQESRKPISLETLFEVVADDLQRLNDNL 113
[Close]
BLAST of Spo19620.1 vs. TAIR (Arabidopsis)
Match: AT1G78510.1 (solanesyl diphosphate synthase 1)

HSP 1 Score: 51.2 bits (121), Expect = 5.100e-7
Identity = 41/120 (34.17%), Postives = 57/120 (47.50%), Query Frame = 1 

		  

Query: 1   MSMSYQNVDFGRMRFDLIACSCSSNASFDRLFAKGSNVKGDGSRKNLRKRYGARKLFCFR 60
           M  S +N+D G M   ++AC C       R F   +      +  N  + YG        
Sbjct: 1   MMTSCRNIDLGTM---MMACGCGR-----RQFPSLAKTVCKFTSSN--RSYGGL------ 60

Query: 61  SGIPKCKVYSTKTPE-TLLNGISEGTLPVLNVRNESNDPISIAELFEVVADDLLTLNKNL 120
             +  CK   TK+ E +LLNGI +      +++ ES  PIS+  LFE+VA DL TLN NL
Sbjct: 61  --VGSCKAVPTKSKEISLLNGIGQSQTVSFDLKQESKQPISLVTLFELVAVDLQTLNDNL 102
The following BLAST results are available for this feature:
BLAST of Spo19620.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902193840|gb|KNA12387.1|4.5e-61100.hypothetical protein SOVF_1258... [more]
gi|731346514|ref|XP_010684494.1|1.2e-3770.8PREDICTED: probable solanesyl-... [more]
gi|388329818|gb|AFK29285.1|2.2e-2349.5putative solanesyl diphosphate... [more]
gi|661890576|emb|CDP06073.1|2.2e-2350.4unnamed protein product [Coffe... [more]
gi|985447929|ref|XP_015385553.1|3.7e-2351.2PREDICTED: solanesyl diphospha... [more]
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BLAST of Spo19620.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QYN9_SPIOL3.1e-61100.Uncharacterized protein OS=Spi... [more]
A0A0J8BWM4_BETVU8.2e-3870.8Uncharacterized protein OS=Bet... [more]
M4H1W7_SALMI1.5e-2349.5Putative solanesyl diphosphate... [more]
A0A068UEL4_COFCA1.5e-2350.4Uncharacterized protein OS=Cof... [more]
B9GGY7_POPTR2.6e-2349.5Solanesyl diphosphate synthase... [more]
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BLAST of Spo19620.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
SPS2_ARATH1.5e-838.3Solanesyl diphosphate synthase... [more]
SPS1_ARATH9.1e-634.1Solanesyl diphosphate synthase... [more]
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BLAST of Spo19620.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G17050.18.5e-1038.3solanesyl diphosphate synthase... [more]
AT1G78510.15.1e-734.1solanesyl diphosphate synthase... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014120Solanesyl diphosphate synthasePANTHERPTHR12001:SF18SUBFAMILY NOT NAMEDcoord: 48..120
score: 1.4
IPR017446Polyprenyl synthetase-relatedPANTHERPTHR12001GERANYLGERANYL PYROPHOSPHATE SYNTHASEcoord: 48..120
score: 1.4

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006694 steroid biosynthetic process
biological_process GO:0008299 isoprenoid biosynthetic process
biological_process GO:0015979 photosynthesis
biological_process GO:0009816 defense response to bacterium, incompatible interaction
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0016120 carotene biosynthetic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0016102 diterpenoid biosynthetic process
biological_process GO:0070988 demethylation
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0006811 ion transport
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0006457 protein folding
biological_process GO:0046685 response to arsenic-containing substance
biological_process GO:0009408 response to heat
biological_process GO:0009644 response to high light intensity
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0006560 proline metabolic process
biological_process GO:0006525 arginine metabolic process
biological_process GO:0006557 S-adenosylmethioninamine biosynthetic process
biological_process GO:0008295 spermidine biosynthetic process
biological_process GO:0006597 spermine biosynthetic process
cellular_component GO:0010287 plastoglobule
cellular_component GO:0005829 cytosol
cellular_component GO:0005618 cell wall
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity
molecular_function GO:0046905 phytoene synthase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0018489 vanillate monooxygenase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0010277 chlorophyllide a oxygenase [overall] activity
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0008422 beta-glucosidase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0004715 non-membrane spanning protein tyrosine kinase activity
molecular_function GO:0015238 drug transmembrane transporter activity
molecular_function GO:0015297 antiporter activity
molecular_function GO:0004014 adenosylmethionine decarboxylase activity
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
RNA-Seq Expression