Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGAGCCCCAACAACATTTAACATTCACATTCATCCTTTTTATAAAAGGCCAATAACAAAATATTGGTCTCTTCTAAGTTCTGACTTTTTTTCTCCTCTCTAAATCTTACTGAAAACGATGGGGAGAATGGCGGTAACAACAAGAGCTCCCGGAAAAATCATTCTCGCCGGAGAACACGCCGTCGTTCATGGATCCACTGCCGTCGCCGCCTCCATCAATCTCTGCACCTCCGTCTCTATTCTTTTTTCTCCCGGTAATTAACTTACTCTCTCTGATTTCTGCATTTTGCTGAATTTAATTCTGTATTCTTTGCATAAATGCGCTTCTTTTTCCTCAAGTAAATTAAATTTATGTTTCTCACTTAGCTCAATTTCTTATCGGATAATGTTTATTATGGTGATTGATTGAGATTATGGAATTGCTTTTTAGAATTGTTTGATTGTTTCTAACTTTCTATGTTAATTTTACAACCCCGTTAAGGTTAGTGTAGATTTCCGAGTAACAAAGTGATTGATGCATTATGAATAGTATGATTGTAATGGTTAAAGTGTTAACAAGTGTTGTAATTTATTGAATAACAAGTAGAGATTTCATTTATTCGGTTATTGTTTTGGGAATTGGGAACCAATTTTTAGTGAAGAAATTTGGTAAATTGTATAAACATGAGAAAATTGCAATTGATAATTTGAAGTAATCTAAAAATATACCTAATTTATCATTATGAGACAAATTACTACTAATATTTCAACTGATTGGAATTCCACGGAATTGTGATTTCGGAATATATGGTCTCACACTCTCCCCTCCGTTGCTGGTGGCATGTATTGACTTACGCCAGGCCGTATTGAACTGTTTTTGATTCATTCTTTTGCAAAGCCCGAGGTAAAAGAGCCCATGACGCGCATCTACTGAAGTCCTGTATAGACCGGCTCTAAGGGGTCAATACCATTATTGTTTACACTTTACATTCTAGGACTTTTGTATAGGTCTCAAACATTCAAACGCTTCATCATTTAAAGAAGATTTTTGATGGAATCTCGCTTACTAGATTTTAAAATGTACTTTATTTGGTAATGAGCTCGCCCTGTGACAGAACCTTTGCTTTCCCAGTGTGTTACTTATGCCTTATGTTCAGTTTGTTGTTAATATTGAATGTAGCAGTCCTGTTTTTTTGTGTGCAAACATAGGTGATATGCTTAAGCTTGAGCTCAAGGACATGGAACTAGAATTTTCCTGGCCAATCGGGAAAATTAAAGAAGTAATTCCAGATTTTGATACCCCCTCACCTTCAACACCCTTACCTTGTTCATCAGAAACCCTTAAGTCAATAGCATCACTCTACGAAGAGCAAAATATTCCAGAGGCAAAAATAACGTTGGCTTCTGGAGTGTCAGCTTTTCTCTGGCTATACACGGCCACCCAAGGGTATGTTCATGATATTGTCCCTACTCCTCCAATCATGTTGCTGAAGGAAGATTTATTCTTAGATGCAACCAATACTGATGAATTTTTCCTTAGTTTATGTTCTGATATTGTCCATGGTCGGCCTCTATTAATGTTAAGCAGTTTATTTACCAATGGTTGGTTTTTCTCATATTTATTTTTTCAACTTATTCTTGTATGTTAGGTACAAACCTGCAACGGTAACTGTGACTTCTGAACTTCCTCTAGGTGCGGGATTGGGTTCATCTGCTGCATTCTGTGTGGCACTTTCAGGTGCCCTTCTTGCATTGTCAGAATGTTGTGAGCTTGACTACAGTCAACAAGGCTGGTTAACTTTGAGGAATAGCGAGCTTGATCTGGTAAACAAATGGGCTTTTGAAGGTGAAAAGATAATTCACGGAAGGCCATCTGGTATCGACAACACAGTAAGCACCTATGGTATGTCAGCCTATTCAATTGATTCTTGGAACGCAGGTCTTCCTTATATGTATACATATGTTTTTTCTGTTGGATCGTTCTTGCTATCACTTTCTTTTGAGGAAGGGGGAGAAGAACATAAGTCTTCAGGAATGAGGCAAAGCACGATTTATTTCTCCAATTGATAGTTTCCAAAGATAATCTTTATCTATTTTTCTTAACATAGTTTGAAATCGCAGTTGTATGGTCATGACATACAAAAGGTCTTGCGCGCACAAGGTTTACAATAAATTTATTGTACACCAAGATAACTTTTATGCAGTTTTTCATAACTTTAACCTATTTTTCTGTAACTTTTATATTATAAAATAAAAAAATTGATAGATAAACATTTTAAAGGGTTAAATGATTAATTTATACATTATTAGTGATTTTGAAGAAATAATATTTATTCAAATGAAAAAATTTATCATTAAAAAATAGATAACTTTTACATATATAAATGTAACTTTTAAGCATTTTGAGTCAACTTTTACTCCGGTGTACAATATTTATTGTACACCCATTATAAACAAGAATTTGTGCATGCCATAAAACATTCGAGTACAGATTTTGTTGTCTATTCCATTATTTTTAATGTTTTAAAGAATAGAGCATGGGCTGAAATATAAGTAGACGCTCCTTGCTAGTTTCCTAGTTGTTACAAGTTATGCCGTCATTGCTATATTTGATTTGTGAAAATAGAGAATTCATGTTAATTGGTAGCAGACAGACCTAGAACTCTAGAAGGCTAGAAGATATTAAGTGCTACAAAAGTTTTGAAGTTTTTTCTTGTCAAGAAGCCAATAACATACTGAAGCCAGATTTTAGACCCAATAGTTAATAGATTGTTTCTAGGACTTGAAGGATGTCCACTGAGGGAGTTAGTCGTATTTGAAATCATTTGAATGTTGGCCATTATGTCATTCGTTTTGTTCTTTTATTTTAGATTTAAACACTTGTTGCTTCTTGGCCTCAGAATCAATTGGGCATAATCTCTAAGAATAAGGCCTTGTAGGCTTGTATACTTGACTTCCTTGCCCTACCTAAGGAAAACATGTCATATTAGAGGCATTGGGTAACTTTAATATCGAGGTAACACGTTGCTTTCAAGAGGGATTGAGATAACTTTGACATTGATTTTAGGCAAAATATGTTTGAGACGGTTTCATAGTTAACTTATTGTAAGAACAAGATGACTTTTCTGTTTCCTTTGGGGTTACTTTTTACGTGTCAGAATAAGCTAGTGTATAACTGCCTCACCGAAGACTTGCTATTGATTTCTGTTTTCCTCATGTATTATAAAATTGTGTTTAATAGGCCAATGTTTTCTATAGAGGTACGGGGTAGTCCTATACGTGTTGTTGATGTTGTGCTATGGCCTGCTATTAGTTTTTGGGTTGTTAAAGGATAAGGTGGCTGATGTTTCATGAATCTTGGGAGTCTGAAGCATTACGTACTGAGACTGAAATCTCCTTTCTTTTTGATTCCTCTGTGTATTAAGTGTCCTTTTTGGAAAGAATTTGATGGTTATAATATTAGTTTATCACTTGTATTAGAGGAACTAAAATAAGCAAGAGTATTTCATGATCTAAATATGTAAAATTATGAGGGGTGTCTCATTTTCAATATGTCCTCAAATGTTCAGGAAATGACTGTCATTGTGATTCAATAGACAAAAAATAACAGTGTACAATCGTATAACATGGAAATATGGCATACATTGACATTGTATAAATGGAAAAGAAGTAGGATATCTGTTGAAGTTCTTGAGTAAAGTATCTGGAACATCAAGTTGAAGTTAGAAAACATAGAGGCACTACATATGACATCTTGGTTTCATTTTAAGCTCTCAGATTTTCATTGGCCTGTTTGATACATTAAAACCATACAATTTATCTGTGAGATGAACCACTTATGATGTATTACGCAGGAAATATGATACAGTTCAAGTCAGGTGAAATCACAAGGCTTAAGTCGAATACACCGTTGAAGATGCTAATCACAAATACTAAGGTGGGGAGAAACACAAAAGCATTAGTTGCTGGTGTGTCAGAGAGGACACTGCGGTACCCTGAGGCAATGACTTGTGTATTTAAAGCTGTTGACTCTATTAGCAAGGAGCTGTCTAATATCATACAAACATCAGCTTCAAATGATATTGCGGTCACTGAAAAGGAAGATAAGGTGGAAGAACTAATGGAGATGAACCAAGGCTTGCTTCAGTGTATGGGAGTAAGCCATGCTTCCATAGAGACTGTTCTCCGAACAACGCTTAAATACAAATTACGTTCCAAGCTGACAGGAGCTGGTGGTGGAGGTTGTGTACTGACACTATTGCCGACACGTATCCTTTTAAACATTTTAATATCTTGATTTGCATTTACAGTAAATATTCTATTAACTCCTGTATTAATTGTAATACCACCCAAATTGAGTCGAACTCTTGCCTGAAATTGTAACTCTTAAGTCTGTCCCTGCACGTAATTATTTGTCCTTTTTCCTTGACCATGTAATTCAGTTCTGTCCAGCATCGTGGTAGATAAAGTGGTTGCTGAGTTAGAATCCTGTGGCTTCCAATGCTTCACGGCCGGAATTGGTGGCAATGGTTTGGAGGTATGCTTCAGTGATAATGCCCAAATTTGAGCTGTCCATTCTCGTGAGCCATTGTGAGTCTTACCTTTGTTGTTGAATGATTCTGATTGTACCAATTTAAGTCATTGTTTCCCACTGTACAATATGTTGTACATTAGGTCCATTATTGTAGTTTCCTTGCTCATTCTTCTTCATTGCATCAGAAGCCTCTTTGATCCAACAAATTTGAGAACCTGATGTAGTTATCAAAAACTTTGAGTTACTTGAGAAATAAAATTATTTATAGTTCTCAG CGAGCCCCAACAACATTTAACATTCACATTCATCCTTTTTATAAAAGGCCAATAACAAAATATTGGTCTCTTCTAAGTTCTGACTTTTTTTCTCCTCTCTAAATCTTACTGAAAACGATGGGGAGAATGGCGGTAACAACAAGAGCTCCCGGAAAAATCATTCTCGCCGGAGAACACGCCGTCGTTCATGGATCCACTGCCGTCGCCGCCTCCATCAATCTCTGCACCTCCGTCTCTATTCTTTTTTCTCCCGGTGATATGCTTAAGCTTGAGCTCAAGGACATGGAACTAGAATTTTCCTGGCCAATCGGGAAAATTAAAGAAGTAATTCCAGATTTTGATACCCCCTCACCTTCAACACCCTTACCTTGTTCATCAGAAACCCTTAAGTCAATAGCATCACTCTACGAAGAGCAAAATATTCCAGAGGCAAAAATAACGTTGGCTTCTGGAGTGTCAGCTTTTCTCTGGCTATACACGGCCACCCAAGGGTACAAACCTGCAACGGTAACTGTGACTTCTGAACTTCCTCTAGGTGCGGGATTGGGTTCATCTGCTGCATTCTGTGTGGCACTTTCAGGTGCCCTTCTTGCATTGTCAGAATGTTGTGAGCTTGACTACAGTCAACAAGGCTGGTTAACTTTGAGGAATAGCGAGCTTGATCTGGTAAACAAATGGGCTTTTGAAGGTGAAAAGATAATTCACGGAAGGCCATCTGGTATCGACAACACAGTAAGCACCTATGGAAATATGATACAGTTCAAGTCAGGTGAAATCACAAGGCTTAAGTCGAATACACCGTTGAAGATGCTAATCACAAATACTAAGGTGGGGAGAAACACAAAAGCATTAGTTGCTGGTGTGTCAGAGAGGACACTGCGGTACCCTGAGGCAATGACTTGTGTATTTAAAGCTGTTGACTCTATTAGCAAGGAGCTGTCTAATATCATACAAACATCAGCTTCAAATGATATTGCGGTCACTGAAAAGGAAGATAAGGTGGAAGAACTAATGGAGATGAACCAAGGCTTGCTTCAGTGTATGGGAGTAAGCCATGCTTCCATAGAGACTGTTCTCCGAACAACGCTTAAATACAAATTACGTTCCAAGCTGACAGGAGCTGGTGGTGGAGGTTGTGTACTGACACTATTGCCGACACTTCTGTCCAGCATCGTGGTAGATAAAGTGGTTGCTGAGTTAGAATCCTGTGGCTTCCAATGCTTCACGGCCGGAATTGGTGGCAATGGTTTGGAGGTATGCTTCAGTGATAATGCCCAAATTTGAGCTGTCCATTCTCGTGAGCCATTGTGAGTCTTACCTTTGTTGTTGAATGATTCTGATTGTACCAATTTAAGTCATTGTTTCCCACTGTACAATATGTTGTACATTAGGTCCATTATTGTAGTTTCCTTGCTCATTCTTCTTCATTGCATCAGAAGCCTCTTTGATCCAACAAATTTGAGAACCTGATGTAGTTATCAAAAACTTTGAGTTACTTGAGAAATAAAATTATTTATAGTTCTCAG ATGGGGAGAATGGCGGTAACAACAAGAGCTCCCGGAAAAATCATTCTCGCCGGAGAACACGCCGTCGTTCATGGATCCACTGCCGTCGCCGCCTCCATCAATCTCTGCACCTCCGTCTCTATTCTTTTTTCTCCCGGTGATATGCTTAAGCTTGAGCTCAAGGACATGGAACTAGAATTTTCCTGGCCAATCGGGAAAATTAAAGAAGTAATTCCAGATTTTGATACCCCCTCACCTTCAACACCCTTACCTTGTTCATCAGAAACCCTTAAGTCAATAGCATCACTCTACGAAGAGCAAAATATTCCAGAGGCAAAAATAACGTTGGCTTCTGGAGTGTCAGCTTTTCTCTGGCTATACACGGCCACCCAAGGGTACAAACCTGCAACGGTAACTGTGACTTCTGAACTTCCTCTAGGTGCGGGATTGGGTTCATCTGCTGCATTCTGTGTGGCACTTTCAGGTGCCCTTCTTGCATTGTCAGAATGTTGTGAGCTTGACTACAGTCAACAAGGCTGGTTAACTTTGAGGAATAGCGAGCTTGATCTGGTAAACAAATGGGCTTTTGAAGGTGAAAAGATAATTCACGGAAGGCCATCTGGTATCGACAACACAGTAAGCACCTATGGAAATATGATACAGTTCAAGTCAGGTGAAATCACAAGGCTTAAGTCGAATACACCGTTGAAGATGCTAATCACAAATACTAAGGTGGGGAGAAACACAAAAGCATTAGTTGCTGGTGTGTCAGAGAGGACACTGCGGTACCCTGAGGCAATGACTTGTGTATTTAAAGCTGTTGACTCTATTAGCAAGGAGCTGTCTAATATCATACAAACATCAGCTTCAAATGATATTGCGGTCACTGAAAAGGAAGATAAGGTGGAAGAACTAATGGAGATGAACCAAGGCTTGCTTCAGTGTATGGGAGTAAGCCATGCTTCCATAGAGACTGTTCTCCGAACAACGCTTAAATACAAATTACGTTCCAAGCTGACAGGAGCTGGTGGTGGAGGTTGTGTACTGACACTATTGCCGACACTTCTGTCCAGCATCGTGGTAGATAAAGTGGTTGCTGAGTTAGAATCCTGTGGCTTCCAATGCTTCACGGCCGGAATTGGTGGCAATGGTTTGGAGGTATGCTTCAGTGATAATGCCCAAATTTGA MGRMAVTTRAPGKIILAGEHAVVHGSTAVAASINLCTSVSILFSPGDMLKLELKDMELEFSWPIGKIKEVIPDFDTPSPSTPLPCSSETLKSIASLYEEQNIPEAKITLASGVSAFLWLYTATQGYKPATVTVTSELPLGAGLGSSAAFCVALSGALLALSECCELDYSQQGWLTLRNSELDLVNKWAFEGEKIIHGRPSGIDNTVSTYGNMIQFKSGEITRLKSNTPLKMLITNTKVGRNTKALVAGVSERTLRYPEAMTCVFKAVDSISKELSNIIQTSASNDIAVTEKEDKVEELMEMNQGLLQCMGVSHASIETVLRTTLKYKLRSKLTGAGGGGCVLTLLPTLLSSIVVDKVVAELESCGFQCFTAGIGGNGLEVCFSDNAQI Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo19626.1 vs. NCBI nr
Match: gi|902218339|gb|KNA17997.1| (hypothetical protein SOVF_074730 [Spinacia oleracea]) HSP 1 Score: 747.3 bits (1928), Expect = 1.400e-212 Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 1
BLAST of Spo19626.1 vs. NCBI nr
Match: gi|731327906|ref|XP_010674767.1| (PREDICTED: mevalonate kinase isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 629.0 bits (1621), Expect = 5.400e-177 Identity = 321/387 (82.95%), Postives = 355/387 (91.73%), Query Frame = 1
BLAST of Spo19626.1 vs. NCBI nr
Match: gi|731327908|ref|XP_010674768.1| (PREDICTED: mevalonate kinase isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 575.1 bits (1481), Expect = 9.300e-161 Identity = 287/341 (84.16%), Postives = 318/341 (93.26%), Query Frame = 1
BLAST of Spo19626.1 vs. NCBI nr
Match: gi|470133157|ref|XP_004302439.1| (PREDICTED: mevalonate kinase [Fragaria vesca subsp. vesca]) HSP 1 Score: 561.6 bits (1446), Expect = 1.100e-156 Identity = 286/387 (73.90%), Postives = 329/387 (85.01%), Query Frame = 1
BLAST of Spo19626.1 vs. NCBI nr
Match: gi|802756811|ref|XP_012089078.1| (PREDICTED: mevalonate kinase [Jatropha curcas]) HSP 1 Score: 560.5 bits (1443), Expect = 2.400e-156 Identity = 286/386 (74.09%), Postives = 331/386 (85.75%), Query Frame = 1
BLAST of Spo19626.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RGK8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_074730 PE=3 SV=1) HSP 1 Score: 747.3 bits (1928), Expect = 9.500e-213 Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 1
BLAST of Spo19626.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CP34_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g081630 PE=3 SV=1) HSP 1 Score: 629.0 bits (1621), Expect = 3.800e-177 Identity = 321/387 (82.95%), Postives = 355/387 (91.73%), Query Frame = 1
BLAST of Spo19626.1 vs. UniProtKB/TrEMBL
Match: A0A067JVG6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23362 PE=3 SV=1) HSP 1 Score: 560.5 bits (1443), Expect = 1.700e-156 Identity = 286/386 (74.09%), Postives = 331/386 (85.75%), Query Frame = 1
BLAST of Spo19626.1 vs. UniProtKB/TrEMBL
Match: B9I7X0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s02490g PE=3 SV=2) HSP 1 Score: 557.4 bits (1435), Expect = 1.400e-155 Identity = 286/384 (74.48%), Postives = 323/384 (84.11%), Query Frame = 1
BLAST of Spo19626.1 vs. UniProtKB/TrEMBL
Match: A9PHY0_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 555.8 bits (1431), Expect = 4.100e-155 Identity = 286/384 (74.48%), Postives = 322/384 (83.85%), Query Frame = 1
BLAST of Spo19626.1 vs. ExPASy Swiss-Prot
Match: KIME_ARATH (Mevalonate kinase OS=Arabidopsis thaliana GN=At5g27450 PE=2 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 5.000e-130 Identity = 254/385 (65.97%), Postives = 301/385 (78.18%), Query Frame = 1
BLAST of Spo19626.1 vs. ExPASy Swiss-Prot
Match: KIME_HUMAN (Mevalonate kinase OS=Homo sapiens GN=MVK PE=1 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 4.000e-63 Identity = 147/377 (38.99%), Postives = 218/377 (57.82%), Query Frame = 1
BLAST of Spo19626.1 vs. ExPASy Swiss-Prot
Match: KIME_RAT (Mevalonate kinase OS=Rattus norvegicus GN=Mvk PE=1 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 6.400e-61 Identity = 150/380 (39.47%), Postives = 221/380 (58.16%), Query Frame = 1
BLAST of Spo19626.1 vs. ExPASy Swiss-Prot
Match: KIME_MOUSE (Mevalonate kinase OS=Mus musculus GN=Mvk PE=1 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.900e-60 Identity = 150/382 (39.27%), Postives = 221/382 (57.85%), Query Frame = 1
BLAST of Spo19626.1 vs. ExPASy Swiss-Prot
Match: KIME_BOVIN (Mevalonate kinase OS=Bos taurus GN=MVK PE=2 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.900e-60 Identity = 151/381 (39.63%), Postives = 219/381 (57.48%), Query Frame = 1
BLAST of Spo19626.1 vs. TAIR (Arabidopsis)
Match: AT5G27450.1 (mevalonate kinase) HSP 1 Score: 465.7 bits (1197), Expect = 2.800e-131 Identity = 254/385 (65.97%), Postives = 301/385 (78.18%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo19626.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo19626.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo19626.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo19626.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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