Spo19659 (gene) | SpinachBase

Overview


Name	Spo19659
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	RNA polymerase II elongation factor ELL3 isoform 1
Location	SpoScf_01277 : 181185 .. 182253 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGAATCAAAGGAAACACACATAGTAGAAATCCCAATTGTTGAAGAATTCCAAGACCAACAATCAAAAACAGCAATAATAATCCAACAACACCCAATGATGGAAATCTCGAAAAGTCCAGGACATCTCCTCCTCCTTAAACTTTGGCAGAGAGAAGAACACCTCTTCTCCCACCGCATCTCCGTCGCTGAAACCAAACTAGACACCCTCCGCCGCGAAATATTCCACCTCTGCTGCTCCTTCCTCGTCTTCCACGCCTTTGTCACCACCCTCCTCTTCACTTCCTCTGCCGCCGAAGCTCAATTGGGTGTCATCCGGTGTAATAAGTGGTGGGTACCTTCCTTCCTCGGGGCGTCCACCTCGGCCGCAATAGTGGTATTGGTGCAAGTGAAGTTGTGGAGGTACTGGAAGGTGACTGAGCGAGTGAAGAGAGAGAAAACAGATAGCCGGGCCCTCGGGCGGGCAGTTCAGGAGCTTAGAATGAAAGGGGCTAATTTTGATCTATCAAAGGAGATGAGCTTTTGTGACAGTAGCAAGAAGATTAAGAAAAGCTCAAGTGTTGAGATTAAGTGGAAACCTAAGATTTGGTGTTCTAATAATTTAGTAACTTTTTGCTTAATTTTGTTTGCAGGTCTTGCATTTCCTGCTCCCAAGTTGTTTCTCTGCATAATTTGATTAGATTAATTCTCTAATTACAACAATTGGGTATGTAATTTTATCATTCTTCTTATATCCTTATACCATTTTCTATTTATTTATTGGGTTTTAATATTTGCAGGGATCATGAAATGCTGGACATGGAAACACTTGAGATTGAGGGATGAAGCAATGTGGTCCGGTTGACTTTTAATTTTTTACACATATATTGGAATTTGATAATTTGTACAAACAAAAAGAAAGTGTTTGACAGAATATTGGTATTGTGGTCGTCAACTGGGAAAATCAGGGTTATAATACGAGCACCACTTCTTGTGTGCTTGAGAAGATCATCAATTTTTTGATTCTTTTATTCAATTGAAAATAATAATGACATATTTTATTTGATTCCTAGTTACTCAATTTCTCT

mRNA sequence

ATGGGAGAATCAAAGGAAACACACATAGTAGAAATCCCAATTGTTGAAGAATTCCAAGACCAACAATCAAAAACAGCAATAATAATCCAACAACACCCAATGATGGAAATCTCGAAAAGTCCAGGACATCTCCTCCTCCTTAAACTTTGGCAGAGAGAAGAACACCTCTTCTCCCACCGCATCTCCGTCGCTGAAACCAAACTAGACACCCTCCGCCGCGAAATATTCCACCTCTGCTGCTCCTTCCTCGTCTTCCACGCCTTTGTCACCACCCTCCTCTTCACTTCCTCTGCCGCCGAAGCTCAATTGGGTGTCATCCGGTGTAATAAGTGGTGGGTACCTTCCTTCCTCGGGGCGTCCACCTCGGCCGCAATAGTGGTATTGGTGCAAGTGAAGTTGTGGAGGTACTGGAAGGTGACTGAGCGAGTGAAGAGAGAGAAAACAGATAGCCGGGCCCTCGGGCGGGCAGTTCAGGAGCTTAGAATGAAAGGGGCTAATTTTGATCTATCAAAGGAGATGAGCTTTTGTGACAGTAGCAAGAAGATTAAGAAAAGCTCAAGTGTTGAGATTAAGTGGAAACCTAAGATTTGGTGTTCTAATAATTTAATTAATTCTCTAATTACAACAATTGGGGATCATGAAATGCTGGACATGGAAACACTTGAGATTGAGGGATGAAGCAATGTGGTCCGGTTGACTTTTAATTTTTTACACATATATTGGAATTTGATAATTTGTACAAACAAAAAGAAAGTGTTTGACAGAATATTGGTATTGTGGTCGTCAACTGGGAAAATCAGGGTTATAATACGAGCACCACTTCTTGTGTGCTTGAGAAGATCATCAATTTTTTGATTCTTTTATTCAATTGAAAATAATAATGACATATTTTATTTGATTCCTAGTTACTCAATTTCTCT

Coding sequence (CDS)

ATGGGAGAATCAAAGGAAACACACATAGTAGAAATCCCAATTGTTGAAGAATTCCAAGACCAACAATCAAAAACAGCAATAATAATCCAACAACACCCAATGATGGAAATCTCGAAAAGTCCAGGACATCTCCTCCTCCTTAAACTTTGGCAGAGAGAAGAACACCTCTTCTCCCACCGCATCTCCGTCGCTGAAACCAAACTAGACACCCTCCGCCGCGAAATATTCCACCTCTGCTGCTCCTTCCTCGTCTTCCACGCCTTTGTCACCACCCTCCTCTTCACTTCCTCTGCCGCCGAAGCTCAATTGGGTGTCATCCGGTGTAATAAGTGGTGGGTACCTTCCTTCCTCGGGGCGTCCACCTCGGCCGCAATAGTGGTATTGGTGCAAGTGAAGTTGTGGAGGTACTGGAAGGTGACTGAGCGAGTGAAGAGAGAGAAAACAGATAGCCGGGCCCTCGGGCGGGCAGTTCAGGAGCTTAGAATGAAAGGGGCTAATTTTGATCTATCAAAGGAGATGAGCTTTTGTGACAGTAGCAAGAAGATTAAGAAAAGCTCAAGTGTTGAGATTAAGTGGAAACCTAAGATTTGGTGTTCTAATAATTTAATTAATTCTCTAATTACAACAATTGGGGATCATGAAATGCTGGACATGGAAACACTTGAGATTGAGGGATGA

Protein sequence

MGESKETHIVEIPIVEEFQDQQSKTAIIIQQHPMMEISKSPGHLLLLKLWQREEHLFSHRISVAETKLDTLRREIFHLCCSFLVFHAFVTTLLFTSSAAEAQLGVIRCNKWWVPSFLGASTSAAIVVLVQVKLWRYWKVTERVKREKTDSRALGRAVQELRMKGANFDLSKEMSFCDSSKKIKKSSSVEIKWKPKIWCSNNLINSLITTIGDHEMLDMETLEIEG

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo19659.1	Spo19659.1	mRNA

Homology

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BLAST of Spo19659.1 vs. NCBI nr
Match: gi|902235848|gb|KNA24110.1| (hypothetical protein SOVF_018840 [Spinacia oleracea])

HSP 1 Score: 401.4 bits (1030), Expect = 1.100e-108
Identity = 202/203 (99.51%), Postives = 203/203 (100.00%), Query Frame = 1


		  
Query: 1   MGESKETHIVEIPIVEEFQDQQSKTAIIIQQHPMMEISKSPGHLLLLKLWQREEHLFSHR 60
           MGESKETHIVEIPIVEEFQDQQSKTAIIIQQHPMMEISKSPGHLLLLKLWQREEHLFSHR
Sbjct: 1   MGESKETHIVEIPIVEEFQDQQSKTAIIIQQHPMMEISKSPGHLLLLKLWQREEHLFSHR 60

Query: 61  ISVAETKLDTLRREIFHLCCSFLVFHAFVTTLLFTSSAAEAQLGVIRCNKWWVPSFLGAS 120
           ISVAETKLDTLRREIFHLCCSFLVFHAFVTTLLFTSSAAEAQLGVIRCNKWWVPSFLGAS
Sbjct: 61  ISVAETKLDTLRREIFHLCCSFLVFHAFVTTLLFTSSAAEAQLGVIRCNKWWVPSFLGAS 120

Query: 121 TSAAIVVLVQVKLWRYWKVTERVKREKTDSRALGRAVQELRMKGANFDLSKEMSFCDSSK 180
           TSAAIVVLVQVKLWRYWKVTERVKREKTDSRALGRAVQELRMKGANFDLSKEMSFCDSSK
Sbjct: 121 TSAAIVVLVQVKLWRYWKVTERVKREKTDSRALGRAVQELRMKGANFDLSKEMSFCDSSK 180

Query: 181 KIKKSSSVEIKWKPKIWCSNNLI 204
           KIKKSSSVEIKWKPKIWCSNNL+
Sbjct: 181 KIKKSSSVEIKWKPKIWCSNNLV 203

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BLAST of Spo19659.1 vs. NCBI nr
Match: gi|731320233|ref|XP_010670697.1| (PREDICTED: uncharacterized protein LOC104887689 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 305.1 bits (780), Expect = 1.000e-79
Identity = 156/205 (76.10%), Postives = 178/205 (86.83%), Query Frame = 1


		  
Query: 1   MGESKETHIVEIPIVEE-FQDQQSKTAIIIQQHPMMEISKSPGHLLLLKLWQREEHLFSH 60
           M  SKETHIVEIP+ +E +Q+QQSKTAIIIQQHPMMEIS+SPGHLLLLKLWQREEHLF+ 
Sbjct: 1   MPNSKETHIVEIPVHQENYQNQQSKTAIIIQQHPMMEISQSPGHLLLLKLWQREEHLFTR 60

Query: 61  RISVAETKLDTLRREIFHLCCSFLVFHAFVTTLLFTSSA-AEAQLGVIRCNKWWVPSFLG 120
           RI + ETKLD LRREIF LCC FLVFH+F+TTLLFTSS+  +A   V RC+KWWVPS   
Sbjct: 61  RILLNETKLDHLRREIFQLCCYFLVFHSFITTLLFTSSSTGDAHSSVTRCHKWWVPSIFV 120

Query: 121 ASTSAAIVVLVQVKLWRYWKVTERVKREKTDSRALGRAVQELRMKGANFDLSKEMSFCDS 180
           A++S AI  LVQVKLWRYWKVTER++REK DSR LGR++QELRMKGA+FDLSKEM+F  +
Sbjct: 121 AASSGAIAFLVQVKLWRYWKVTERLRREKNDSRTLGRSIQELRMKGASFDLSKEMNFV-N 180

Query: 181 SKKIKKSSSVEIKWKPKIWCSNNLI 204
           SKK KKSSSVEIKWKPKIWCSNNL+
Sbjct: 181 SKKAKKSSSVEIKWKPKIWCSNNLV 204

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BLAST of Spo19659.1 vs. NCBI nr
Match: gi|870865797|gb|KMT16835.1| (hypothetical protein BVRB_2g043160 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 260.4 bits (664), Expect = 2.900e-66
Identity = 130/171 (76.02%), Postives = 148/171 (86.55%), Query Frame = 1


		  
Query: 34  MMEISKSPGHLLLLKLWQREEHLFSHRISVAETKLDTLRREIFHLCCSFLVFHAFVTTLL 93
           MMEIS+SPGHLLLLKLWQREEHLF+ RI + ETKLD LRREIF LCC FLVFH+F+TTLL
Sbjct: 1   MMEISQSPGHLLLLKLWQREEHLFTRRILLNETKLDHLRREIFQLCCYFLVFHSFITTLL 60

Query: 94  FTSSAA-EAQLGVIRCNKWWVPSFLGASTSAAIVVLVQVKLWRYWKVTERVKREKTDSRA 153
           FTSS+  +A   V RC+KWWVPS   A++S AI  LVQVKLWRYWKVTER++REK DSR 
Sbjct: 61  FTSSSTGDAHSSVTRCHKWWVPSIFVAASSGAIAFLVQVKLWRYWKVTERLRREKNDSRT 120

Query: 154 LGRAVQELRMKGANFDLSKEMSFCDSSKKIKKSSSVEIKWKPKIWCSNNLI 204
           LGR++QELRMKGA+FDLSKEM+F  +SKK KKSSSVEIKWKPKIWCSNNL+
Sbjct: 121 LGRSIQELRMKGASFDLSKEMNFV-NSKKAKKSSSVEIKWKPKIWCSNNLV 170

[Close]

BLAST of Spo19659.1 vs. NCBI nr
Match: gi|568841661|ref|XP_006474776.1| (PREDICTED: uncharacterized protein LOC102626875 [Citrus sinensis])

HSP 1 Score: 232.3 bits (591), Expect = 8.600e-58
Identity = 123/206 (59.71%), Postives = 146/206 (70.87%), Query Frame = 1


		  
Query: 1   MGESKETHIVEIPIVEEFQDQQ---SKTAIIIQQHPMMEISKSPGHLLLLKLWQREEHLF 60
           M E K+ H+VEIP+ EE Q +      T   IQ HP+MEIS+SPGHLLLLKLWQREE LF
Sbjct: 1   MAEMKDAHVVEIPVDEEHQQKVLCCMNTTTAIQHHPLMEISQSPGHLLLLKLWQREEDLF 60

Query: 61  SHRISVAETKLDTLRREIFHLCCSFLVFHAFVTTLLFTSSAAEAQLGVIRCNKWWVPSFL 120
             RIS+ E+++D+++REIF LCC FLVFH F  TLLFTSS +        C KWW+PS L
Sbjct: 61  GRRISLKESRMDSIKREIFQLCCFFLVFHGFFLTLLFTSSVSPKYEHT--CRKWWIPSIL 120

Query: 121 GASTSAAIVVLVQVKLWRYWKVTERVKREKTDSRALGRAVQELRMKGANFDLSKEMSFCD 180
             STS   V LVQ KL+RYWKV  +++REK D+RAL R +QELRMKGA+FDLSKE     
Sbjct: 121 SLSTSLVFVFLVQFKLYRYWKVCRQLQREKNDNRALTRCIQELRMKGASFDLSKE----P 180

Query: 181 SSKKIKKSSSVEIKWKPKIWCSNNLI 204
            S K  KSSSVEIKWKP  WCS N+I
Sbjct: 181 LSGKRMKSSSVEIKWKPLTWCSQNVI 200

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BLAST of Spo19659.1 vs. NCBI nr
Match: gi|567921470|ref|XP_006452741.1| (hypothetical protein CICLE_v10009431mg [Citrus clementina])

HSP 1 Score: 230.7 bits (587), Expect = 2.500e-57
Identity = 123/206 (59.71%), Postives = 145/206 (70.39%), Query Frame = 1


		  
Query: 1   MGESKETHIVEIPIVEEFQDQQ---SKTAIIIQQHPMMEISKSPGHLLLLKLWQREEHLF 60
           M E K+ H+VEIP+ EE Q +      T   IQ HP+MEIS+SPGHLLLLKLWQREE LF
Sbjct: 1   MAEMKDAHVVEIPVDEEHQQKVLCCMNTTTAIQHHPLMEISQSPGHLLLLKLWQREEDLF 60

Query: 61  SHRISVAETKLDTLRREIFHLCCSFLVFHAFVTTLLFTSSAAEAQLGVIRCNKWWVPSFL 120
             RIS+ E+++D+ +REIF LCC FLVFH F  TLLFTSS +        C KWW+PS L
Sbjct: 61  GRRISLKESRMDSSKREIFQLCCFFLVFHGFFLTLLFTSSVSPKYEHT--CRKWWIPSIL 120

Query: 121 GASTSAAIVVLVQVKLWRYWKVTERVKREKTDSRALGRAVQELRMKGANFDLSKEMSFCD 180
             STS   V LVQ KL+RYWKV  +++REK D+RAL R +QELRMKGA+FDLSKE     
Sbjct: 121 SLSTSLVFVFLVQFKLYRYWKVCRQLQREKNDNRALTRCIQELRMKGASFDLSKE----P 180

Query: 181 SSKKIKKSSSVEIKWKPKIWCSNNLI 204
            S K  KSSSVEIKWKP  WCS N+I
Sbjct: 181 LSGKRMKSSSVEIKWKPLTWCSQNVI 200

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BLAST of Spo19659.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RX73_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_018840 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 7.400e-109
Identity = 202/203 (99.51%), Postives = 203/203 (100.00%), Query Frame = 1


		  
Query: 1   MGESKETHIVEIPIVEEFQDQQSKTAIIIQQHPMMEISKSPGHLLLLKLWQREEHLFSHR 60
           MGESKETHIVEIPIVEEFQDQQSKTAIIIQQHPMMEISKSPGHLLLLKLWQREEHLFSHR
Sbjct: 1   MGESKETHIVEIPIVEEFQDQQSKTAIIIQQHPMMEISKSPGHLLLLKLWQREEHLFSHR 60

Query: 61  ISVAETKLDTLRREIFHLCCSFLVFHAFVTTLLFTSSAAEAQLGVIRCNKWWVPSFLGAS 120
           ISVAETKLDTLRREIFHLCCSFLVFHAFVTTLLFTSSAAEAQLGVIRCNKWWVPSFLGAS
Sbjct: 61  ISVAETKLDTLRREIFHLCCSFLVFHAFVTTLLFTSSAAEAQLGVIRCNKWWVPSFLGAS 120

Query: 121 TSAAIVVLVQVKLWRYWKVTERVKREKTDSRALGRAVQELRMKGANFDLSKEMSFCDSSK 180
           TSAAIVVLVQVKLWRYWKVTERVKREKTDSRALGRAVQELRMKGANFDLSKEMSFCDSSK
Sbjct: 121 TSAAIVVLVQVKLWRYWKVTERVKREKTDSRALGRAVQELRMKGANFDLSKEMSFCDSSK 180

Query: 181 KIKKSSSVEIKWKPKIWCSNNLI 204
           KIKKSSSVEIKWKPKIWCSNNL+
Sbjct: 181 KIKKSSSVEIKWKPKIWCSNNLV 203

[Close]

BLAST of Spo19659.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CST7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g043160 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.000e-66
Identity = 130/171 (76.02%), Postives = 148/171 (86.55%), Query Frame = 1


		  
Query: 34  MMEISKSPGHLLLLKLWQREEHLFSHRISVAETKLDTLRREIFHLCCSFLVFHAFVTTLL 93
           MMEIS+SPGHLLLLKLWQREEHLF+ RI + ETKLD LRREIF LCC FLVFH+F+TTLL
Sbjct: 1   MMEISQSPGHLLLLKLWQREEHLFTRRILLNETKLDHLRREIFQLCCYFLVFHSFITTLL 60

Query: 94  FTSSAA-EAQLGVIRCNKWWVPSFLGASTSAAIVVLVQVKLWRYWKVTERVKREKTDSRA 153
           FTSS+  +A   V RC+KWWVPS   A++S AI  LVQVKLWRYWKVTER++REK DSR 
Sbjct: 61  FTSSSTGDAHSSVTRCHKWWVPSIFVAASSGAIAFLVQVKLWRYWKVTERLRREKNDSRT 120

Query: 154 LGRAVQELRMKGANFDLSKEMSFCDSSKKIKKSSSVEIKWKPKIWCSNNLI 204
           LGR++QELRMKGA+FDLSKEM+F  +SKK KKSSSVEIKWKPKIWCSNNL+
Sbjct: 121 LGRSIQELRMKGASFDLSKEMNFV-NSKKAKKSSSVEIKWKPKIWCSNNLV 170

[Close]

BLAST of Spo19659.1 vs. UniProtKB/TrEMBL
Match: V4UTR0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009431mg PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.700e-57
Identity = 123/206 (59.71%), Postives = 145/206 (70.39%), Query Frame = 1


		  
Query: 1   MGESKETHIVEIPIVEEFQDQQ---SKTAIIIQQHPMMEISKSPGHLLLLKLWQREEHLF 60
           M E K+ H+VEIP+ EE Q +      T   IQ HP+MEIS+SPGHLLLLKLWQREE LF
Sbjct: 1   MAEMKDAHVVEIPVDEEHQQKVLCCMNTTTAIQHHPLMEISQSPGHLLLLKLWQREEDLF 60

Query: 61  SHRISVAETKLDTLRREIFHLCCSFLVFHAFVTTLLFTSSAAEAQLGVIRCNKWWVPSFL 120
             RIS+ E+++D+ +REIF LCC FLVFH F  TLLFTSS +        C KWW+PS L
Sbjct: 61  GRRISLKESRMDSSKREIFQLCCFFLVFHGFFLTLLFTSSVSPKYEHT--CRKWWIPSIL 120

Query: 121 GASTSAAIVVLVQVKLWRYWKVTERVKREKTDSRALGRAVQELRMKGANFDLSKEMSFCD 180
             STS   V LVQ KL+RYWKV  +++REK D+RAL R +QELRMKGA+FDLSKE     
Sbjct: 121 SLSTSLVFVFLVQFKLYRYWKVCRQLQREKNDNRALTRCIQELRMKGASFDLSKE----P 180

Query: 181 SSKKIKKSSSVEIKWKPKIWCSNNLI 204
            S K  KSSSVEIKWKP  WCS N+I
Sbjct: 181 LSGKRMKSSSVEIKWKPLTWCSQNVI 200

[Close]

BLAST of Spo19659.1 vs. UniProtKB/TrEMBL
Match: M5WCP6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011160mg PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 8.600e-57
Identity = 123/207 (59.42%), Postives = 147/207 (71.01%), Query Frame = 1


		  
Query: 1   MGESKETHIVEIPIVEEFQDQQSKTAIII---QQHPMMEISKSPGHLLLLKLWQREEHLF 60
           M E K+ H+VEIP+ EE Q + S    II   Q HP+MEIS+SPGHLLLLKLW+REE LF
Sbjct: 1   MAEMKDAHVVEIPVDEEHQQKLSSAMTIISAIQHHPLMEISESPGHLLLLKLWRREEDLF 60

Query: 61  SHRISVAETKLDTLRREIFHLCCSFLVFHAFVTTLLFTSSA-AEAQLGVIRCNKWWVPSF 120
             RI+  E+++D++RREIF LCC FL+FH F  T+LFTSS  +E  +    C KWW+PS 
Sbjct: 61  GRRIARKESRMDSIRREIFQLCCFFLIFHGFFMTILFTSSVNSEEHI----CKKWWIPSI 120

Query: 121 LGASTSAAIVVLVQVKLWRYWKVTERVKREKTDSRALGRAVQELRMKGANFDLSKEMSFC 180
           L  STS   V LVQV L RYWKV  +++REKTD+RAL R +QELRMKGA+FDLSKE    
Sbjct: 121 LSVSTSFVFVFLVQVNLCRYWKVWNQLQREKTDNRALTRCIQELRMKGASFDLSKE---- 180

Query: 181 DSSKKIKKSSSVEIKWKPKIWCSNNLI 204
             S K  KSSSVEIKWKP  WCS  LI
Sbjct: 181 PQSGKRMKSSSVEIKWKPVTWCSQYLI 199

[Close]

BLAST of Spo19659.1 vs. UniProtKB/TrEMBL
Match: M1DZK2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400046514 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.100e-54
Identity = 119/207 (57.49%), Postives = 147/207 (71.01%), Query Frame = 1


		  
Query: 1   MGESKETH-IVEIPIVEEFQDQQSK---TAIIIQQHPMMEISKSPGHLLLLKLWQREEHL 60
           M ESK+ H IVEIP+ EE Q + S    T   IQ HP+MEISKSPGHLLLLKLWQREE L
Sbjct: 1   MAESKDCHVIVEIPVDEEHQLKLSSAITTITAIQNHPLMEISKSPGHLLLLKLWQREEDL 60

Query: 61  FSHRISVAETKLDTLRREIFHLCCSFLVFHAFVTTLLFTSSAAEAQLGVIRCNKWWVPSF 120
              RI+  ET++D++RREIF +CC F +FHA   T+LFTS + +   G + C KWW+PS 
Sbjct: 61  SGRRIAAKETRMDSIRREIFQICCFFFIFHALFFTILFTSVSEDHLDGNVMCQKWWIPSL 120

Query: 121 LGASTSAAIVVLVQVKLWRYWKVTERVKREKTDSRALGRAVQELRMKGANFDLSKEMSFC 180
           L   TS  IV LVQVKL+R+WKV+ +++RE+ D RAL R + ELRMKGA+FDLSKE    
Sbjct: 121 LSVCTSFCIVFLVQVKLYRFWKVSRQLQRERGDGRALTRCISELRMKGASFDLSKEPQI- 180

Query: 181 DSSKKIKKSSSVEIKWKPKIWCSNNLI 204
              KK+ KSSSVEIKWKP  W S N++
Sbjct: 181 --GKKM-KSSSVEIKWKPLTWLSQNVV 203

[Close]

BLAST of Spo19659.1 vs. TAIR (Arabidopsis)
Match: AT5G56120.1 (unknown protein)

HSP 1 Score: 203.4 bits (516), Expect = 1.500e-52
Identity = 110/223 (49.33%), Postives = 150/223 (67.26%), Query Frame = 1


		  
Query: 1   MGESKETHIVEIPIVEEFQDQQSKTAII------------IQQHPMMEISKSPGHLLLLK 60
           M  +K++H+VEIP+ EE +++Q +  ++            IQQHP+ EIS+SPGHLLLLK
Sbjct: 1   MAGTKDSHVVEIPVDEEHKERQQQQQLVAVSNPGMGILKVIQQHPLSEISESPGHLLLLK 60

Query: 61  LWQREEHLFSHRISVAETKLDTLRREIFHLCCSFLVFHAFVTTLLFTSSAAEAQLGVIR- 120
           LWQREE LF  R+ + E++L++++REIF LCC FLVFH F  TL+++SS ++    V++ 
Sbjct: 61  LWQREEDLFCRRVLLKESRLESIKREIFQLCCFFLVFHGFFFTLVYSSSCSD-DADVVKS 120

Query: 121 ---CNKWWVPSFLGASTSAAIVVLVQVKLWRYWKVTERVKREKTDSRALGRAVQELRMKG 180
              C KWW+PS +  +TS  +V LVQ KL+ +WKV   V RE+ D+R L R V ELRMKG
Sbjct: 121 NAVCKKWWIPSAVSLATSLVLVFLVQAKLFVFWKVYRGVNRERNDNRTLTRCVLELRMKG 180

Query: 181 ANFDLSKEMSFCDSSKKIKKSSSVEIKWKPKIWCSNNLINSLI 208
           ++FDLSKE      S K  KSSSVEIKWKP  W S  LI  ++
Sbjct: 181 SSFDLSKE----PMSGKRMKSSSVEIKWKPVTWFSQYLITIVL 218

[Close]

BLAST of Spo19659.1 vs. TAIR (Arabidopsis)
Match: AT3G12870.1 (unknown protein)

HSP 1 Score: 100.1 bits (248), Expect = 1.800e-21
Identity = 57/166 (34.34%), Postives = 93/166 (56.02%), Query Frame = 1


		  
Query: 31  QHPMMEISKSPGHLLLLKLWQREEHLFSHRISVAETKLDTLRREIFHLCCSFLVFHAFVT 90
           +HP+ +I+ +P H LLLK W +EE L   R+S  E+++D++RREI  L   F +FH+   
Sbjct: 17  RHPLHQIADTPTHKLLLKQWLKEEELILSRVSHKESQIDSVRREITQLYIFFFLFHSISL 76

Query: 91  TLLF-TSSAAEAQLGVIRCNKWWVPSFLGASTSAAIVVLVQVKLWRYWKVTERVKREKTD 150
            LLF  SS++ +      C + W+PS     +S  I+  V+ K      + + ++REK D
Sbjct: 77  LLLFHASSSSSSSASSSACKRSWIPSLCALLSSLGIIWAVRYKSEVESHLEKLLEREKED 136

Query: 151 SRALGRAVQELRMKGANFDLSKEMSFCDSSKKIKKSSSVEIKWKPK 196
           ++ L + V+EL+ KG  FDL KE+     +K ++  S    KW  +
Sbjct: 137 AKLLRKCVEELKKKGIEFDLLKEVDALRRAKSLRVESKPVKKWSAR 182

The following BLAST results are available for this feature:

BLAST of Spo19659.1 vs. NCBI nr
BLAST of Spo19659.1 vs. UniProtKB/TrEMBL
BLAST of Spo19659.1 vs. ExPASy Swiss-Prot
BLAST of Spo19659.1 vs. TAIR (Arabidopsis)

BLAST of Spo19659.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902235848\|gb\|KNA24110.1\|	1.1e-108	99.5	hypothetical protein SOVF_0188...	[more]
gi\|731320233\|ref\|XP_010670697.1\|	1.0e-79	76.1	PREDICTED: uncharacterized pro...	[more]
gi\|870865797\|gb\|KMT16835.1\|	2.9e-66	76.0	hypothetical protein BVRB_2g04...	[more]
gi\|568841661\|ref\|XP_006474776.1\|	8.6e-58	59.7	PREDICTED: uncharacterized pro...	[more]
gi\|567921470\|ref\|XP_006452741.1\|	2.5e-57	59.7	hypothetical protein CICLE_v10...	[more]

BLAST of Spo19659.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RX73_SPIOL	7.4e-109	99.5	Uncharacterized protein OS=Spi...	[more]
A0A0J8CST7_BETVU	2.0e-66	76.0	Uncharacterized protein OS=Bet...	[more]
V4UTR0_9ROSI	1.7e-57	59.7	Uncharacterized protein OS=Cit...	[more]
M5WCP6_PRUPE	8.6e-57	59.4	Uncharacterized protein OS=Pru...	[more]
M1DZK2_SOLTU	1.1e-54	57.4	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo19659.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo19659.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT5G56120.1	1.5e-52	49.3	unknown protein	[more]
AT3G12870.1	1.8e-21	34.3	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33287	FAMILY NOT NAMED	coord: 28..174 score: 2.8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006996	organelle organization
biological_process	GO:0016569	covalent chromatin modification
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0006384	transcription initiation from RNA polymerase III promoter
biological_process	GO:0009651	response to salt stress
biological_process	GO:0042127	regulation of cell proliferation
biological_process	GO:0000919	cell plate assembly
biological_process	GO:0009558	embryo sac cellularization
biological_process	GO:0009555	pollen development
biological_process	GO:0010583	response to cyclopentenone
biological_process	GO:0097502	mannosylation
biological_process	GO:0007018	microtubule-based movement
biological_process	GO:0009987	cellular process
biological_process	GO:0006260	DNA replication
biological_process	GO:0043414	macromolecule methylation
biological_process	GO:0050794	regulation of cellular process
biological_process	GO:0060255	regulation of macromolecule metabolic process
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0051301	cell division
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0006011	UDP-glucose metabolic process
biological_process	GO:0008152	metabolic process
biological_process	GO:0030244	cellulose biosynthetic process
biological_process	GO:0008283	cell proliferation
biological_process	GO:0016458	gene silencing
biological_process	GO:0090304	nucleic acid metabolic process
biological_process	GO:2000112	regulation of cellular macromolecule biosynthetic process
biological_process	GO:0019219	regulation of nucleobase-containing compound metabolic process
biological_process	GO:0000910	cytokinesis
biological_process	GO:0000226	microtubule cytoskeleton organization
biological_process	GO:0051726	regulation of cell cycle
biological_process	GO:0048453	sepal formation
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0042023	DNA endoreduplication
biological_process	GO:0016572	histone phosphorylation
biological_process	GO:0007094	mitotic spindle assembly checkpoint
biological_process	GO:0043248	proteasome assembly
biological_process	GO:0051510	regulation of unidimensional cell growth
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0048451	petal formation
biological_process	GO:0006346	methylation-dependent chromatin silencing
biological_process	GO:0051567	histone H3-K9 methylation
biological_process	GO:0031048	chromatin silencing by small RNA
biological_process	GO:0042546	cell wall biogenesis
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005828	kinetochore microtubule
cellular_component	GO:0045298	tubulin complex
cellular_component	GO:0009524	phragmoplast
cellular_component	GO:0000126	transcription factor TFIIIB complex
cellular_component	GO:0010369	chromocenter
cellular_component	GO:0000777	condensed chromosome kinetochore
cellular_component	GO:0005874	microtubule
cellular_component	GO:0005871	kinesin complex
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005635	nuclear envelope
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0005488	binding
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0051753	mannan synthase activity
molecular_function	GO:0016760	cellulose synthase (UDP-forming) activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003777	microtubule motor activity
molecular_function	GO:0017025	TBP-class protein binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0019901	protein kinase binding
molecular_function	GO:0016791	phosphatase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo21419	0.71	Barchart \| Table
Spo22069	0.71	Barchart \| Table
Spo20703	0.71	Barchart \| Table
Spo03241	0.71	Barchart \| Table
Spo05877	0.70	Barchart \| Table
Spo27209	0.70	Barchart \| Table
Spo12458	0.70	Barchart \| Table
Spo22270	0.70	Barchart \| Table
Spo06707	0.69	Barchart \| Table
Spo16579	0.68	Barchart \| Table
Spo27182	0.68	Barchart \| Table
Spo25072	0.68	Barchart \| Table
Spo10291	0.68	Barchart \| Table
Spo21288	0.68	Barchart \| Table
Spo23707	0.68	Barchart \| Table
Spo26332	0.67	Barchart \| Table
Spo30014	0.67	Barchart \| Table
Spo13004	0.67	Barchart \| Table
Spo14533	0.67	Barchart \| Table
Spo17771	0.67	Barchart \| Table
Spo19856	0.67	Barchart \| Table
Spo19869	0.67	Barchart \| Table
Spo20208	0.67	Barchart \| Table
Spo02886	0.66	Barchart \| Table
Spo03706	0.66	Barchart \| Table
Spo11736	0.66	Barchart \| Table
Spo12315	0.66	Barchart \| Table
Spo16366	0.66	Barchart \| Table
Spo18511	0.66	Barchart \| Table
Spo25616	0.65	Barchart \| Table
Spo20829	0.65	Barchart \| Table
Spo19212	0.65	Barchart \| Table
Spo05963	0.65	Barchart \| Table
Spo04216	0.65	Barchart \| Table