Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTCTCAACCATATCTTTGTTTAACGATTACTTGTACTCTCCATAGAAGTTAACTGATTGATGATTCTACATAGTCAAACTATAAAATCTGATTCGGTCATCTATTCATCACCATCCACTCGATCAAACATTGCATACATTTTATTTTAATTTAATTTTCAAAATTCCAAAAACACATGAGAATTGTCTCCTGCCATATCTTTCATTCTCTCTCCTCAAACCTAAACACCGAATAACAGGAAACAAAGATCATAATCATAAAAAAGAAGGAATAATCCTATTAGCAGAATTAGAAACTCAAATTGCTATTTATTTTCATTCATTTTTTATTTTCTAAAACATTGACAATGTCATTTTAGCCAAACACTACTATTCATTGTTTTTCCTCACATGTTACCTACCTTGTACCTGTAATTTTTTTTATACAAGTTCACACAATTTTTGAGTTTCATACTCATAATATTACATTTTCACACCATTTTTAAGTTTCATCCTCAGAAAAAAAAAAAGAAAAAAAGAATTGAAGCTCCGTCTGTGAGAGAGGTCCAATGCCTAATTTTTTGAAGACTATTCTCAAATTCAAGTCGAAGCTCAAGTCTAAGTCCAAGAAGAAGATTCGAACCCCGGGCGATAAGGTTCGTCGTGTTCGTGAGCTCTTGATTCTTCTTAATGATAATAACAATGTTGATCATGGGCCTAATTGGGTTGAAGAGGTATGCTTTTTCACATTTTCCATAAAAAAAATTCTGTCTTTGAATTTATTTGAATGGGTTTTGTTTTTGTTATGTTTGGAATATAAATTTGATGATTGGTTTTTTTAATCAATGATTTGGTGTATGTAATCTTAATGAAATGGAGGCTATGATTCTTATGAGGGGTAAAAATGTGATCTTGATGACATTTTAGTTTTTTATTTTTGGGTAACTGGAAATGTGATCTCGATGACATTAATTTTTTTTTTTTGGGGTAATTATGGTTGATTTGTTGGTTTAAAATGATTGGAAAAAGGTTGATTTTATGTATTGATTTACGAATTTCCCAGAGTTGGATGATGGGGTTTGATTTCATGAATTGAGGTGATAATGTAAGAATTCAATTTTGTTTTCTGTGATATTGTCCCCTAAGCCTTGTTCTGTTTCCAAGAAAGAATGGTGAAGTTTGTAGATTTTCTGGGAATTGTAGATTATCAGATTATAAGGAAGCATATGAAAAGTTGATGACAAAAGGGCTTCATAGATGATGAGAAAGTGAAAAACATCAACTATATTTCACGTAATTAAAGAACGCAGAGATTTAACGTAGTTCACTAACAATGTGTTAGGTACGTCCACAGACAGAGGGGAGGAAAGTTTTATTGATCTTTGAGGATTACAGATTACAGAATACAACTAGGTTATGACCTAAAGAGTTTATATAGTACTCTCTAGACAGATGCGGGAAAGCCTAAAAAATAGGCCCAAAACAGATAACCCTAGTCTAGAATAGCGAGATCCCTGGCTGGGGCGTTGCAGTAAGGGGCTTGACCGATTCAAGACATTATTCTAACATTTCTGTTTTAGTGTATGAAATTGAAAATTTAACATAAATACTTCTTATATTGAGAATTCAACGACTGATCTATGCGCGTTGATTGATGAAAATTGCAACCTTATATGATCTTGAATAATGTTGGATTGCATTCAGTATCATGATTATTATTATTATTTATGTTAATTGTGTTCAGATGAAAGAACTAGGTAAATACTTTGCGGATATTAAATTCACCCTATATGGCACTAGTGAAGCTGAACCTGTCCCAGAAGCTTGTGCACAAGTAACTCAAGAATTCTTCCAAGAAAATACTTTTCGTCTCCTAATAATTTGTCTTTCGAAACTGGACTTGGAGGTCAGTTTTGTATTACCTTTTACAGTCATGCTTCCTTTTCTTTCTACCCAGAAGTTTTCTGACTTCTTTTTCAAATTTAATGCTTCATTTTTCTGGATTTATATACTTGAAGATGTGTAAGCAATATAAGTTTTGGCCAAACTCCTGTTTTCCTAATGTTGCTTATTATTAAAAAGATGATCTCTCTTAGGCCCGAAAAGATGCTACCCAAGTGGTCGCAAATCTGCAAAGACAACAGGTTCATTCACGTTTAATTGCGTGTGAGTACTTGGAAAACAACATTGATCTCATTGATGTATTGGTCTCAGGGTAAGTAATTACCAATTATGTAGGTCAAGTGCCTTCGTTAGCCTTTTTAATCGTGCTTGTTTAATGCTTAAGACTTGATTTTATCAACTAATTATGTTTAAGGTATGAAGACCACAGACTAGCCTTGCACTATGGTAATATGCTCAGGGAGTGTATTCGTCATCAAACCATTGCAAAGTAAGTGATTCAAAATCATGGTTTAGACTCCTGTTCTTTGCTTCATGACAAAATGATTGAAATTTCTGCATAATGATTACAAAATTATAATGTTTTTATTTCATCTGCTTTGTTCATAGGTATGCGCTGGAAACGCACTTGTTCAAGTTTTTTGATTATATACAGCTTCCAGATTTTGAAATATCATCAGATGCTGCCGCAACTTTCAAGGTTTTCATCCTCTTCCTTTATCTGTTTAGTTCATTTGCGGACTCTTGAATCTTCATTTGCTACACCAAACGTCAACTTCTTAGCAGATTTACGTCACTTTTGAACCTAGTTCTGAAAATTCTATGAGATTTCTGAAAAATCTTCCTTGTATGTGGTACTTGCAGGAGTTATTGACCAGGCATAAATCCACTGTTTCAGAGTTTTTGTCTAAAAACTATGATGGGGTAAGTTACCATCAACTATTTACTTTCAGAACTATCTATTTATATATACAATCAGCACTCAGCAAGTTGGTAACGGAAAAACATTTCATCCGTGACATAGTTTTTCAGAGAATTCAACACTAAGTTGCTGCAATCCGCAGTTTATATTACAAAGCGTCAAGCTATCAAGGTAGGGGTACTGTAATTTAATTTGCTACTATCTTTTAAGAGGAAAACTGTTCTTCCATGGTTAAATACAAATATTTCTGAAATGAATCTAAGTTACAAGCATTAATATTAAGTGAGAATTTTAATGTGATGGCATGATGATAAATGCTGATATATCAAAACTTGATTGCCTGTTTCCAGCTTTTGGGAGATATCTTGCTTGATCGTTCAAACTCTGCCACCATGGTGCGGTATGTGAGCTCAAAAGACAACTTGATGATTCTCATGAATCTCCTAAGGGTAATTATTTTTCTTTTATTTTCTATGAATTGGTATTATTATTAACTGTTTGACCTTCCAGAAATTAGTAGAAATTAATTGCGGGTGTTTGATTGTATTGGTACAGGAACCAAGCAGGCCCATACAACTCGAAGCATTTCATATCTTTAAGGTAAATTTGTGTTGTTTTTCCGTTCTTTCTTACTCACATTGTGTTCGTGTTATAACACTTTGTTATATATGACAGCTATGTGTAGCTAACAAAAACAAGCCGCATGAAATCACAGCCATATTGATAGCTAACAGAAGCAAACTTCTTCGCTTCTTTAGTAATTTTACGTTGGACAAAGGTAAATAGAAACCAACTGTAAATATTTGAGTTAAGAACATCTGTGTTGCTCATATTTGCGTTTTGTTAGCAGAGGATCAACAGTTTGAGGCTGACAAAGCTCAGGTGGTAAAGGAGATAGCGGAATTGGAGCCAAAAGAGATTCGATGA GTCTCAACCATATCTTTGTTTAACGATTACTTGTACTCTCCATAGAAGTTAACTGATTGATGATTCTACATAGTCAAACTATAAAATCTGATTCGGTCATCTATTCATCACCATCCACTCGATCAAACATTGCATACATTTTATTTTAATTTAATTTTCAAAATTCCAAAAACACATGAGAATTGTCTCCTGCCATATCTTTCATTCTCTCTCCTCAAACCTAAACACCGAATAACAGGAAACAAAGATCATAATCATAAAAAAGAAGGAATAATCCTATTAGCAGAATTAGAAACTCAAATTGCTATTTATTTTCATTCATTTTTTATTTTCTAAAACATTGACAATGTCATTTTAGCCAAACACTACTATTCATTGTTTTTCCTCACATGTTACCTACCTTGTACCTGTAATTTTTTTTATACAAGTTCACACAATTTTTGAGTTTCATACTCATAATATTACATTTTCACACCATTTTTAAGTTTCATCCTCAGAAAAAAAAAAAGAAAAAAAGAATTGAAGCTCCGTCTGTGAGAGAGGTCCAATGCCTAATTTTTTGAAGACTATTCTCAAATTCAAGTCGAAGCTCAAGTCTAAGTCCAAGAAGAAGATTCGAACCCCGGGCGATAAGGTTCGTCGTGTTCGTGAGCTCTTGATTCTTCTTAATGATAATAACAATGTTGATCATGGGCCTAATTGGGTTGAAGAGATGAAAGAACTAGGTAAATACTTTGCGGATATTAAATTCACCCTATATGGCACTAGTGAAGCTGAACCTGTCCCAGAAGCTTGTGCACAAGTAACTCAAGAATTCTTCCAAGAAAATACTTTTCGTCTCCTAATAATTTGTCTTTCGAAACTGGACTTGGAGGCCCGAAAAGATGCTACCCAAGTGGTCGCAAATCTGCAAAGACAACAGGTTCATTCACGTTTAATTGCGTGTGAGTACTTGGAAAACAACATTGATCTCATTGATGTATTGGTCTCAGGGTATGAAGACCACAGACTAGCCTTGCACTATGGTAATATGCTCAGGGAGTGTATTCGTCATCAAACCATTGCAAAGTATGCGCTGGAAACGCACTTGTTCAAGTTTTTTGATTATATACAGCTTCCAGATTTTGAAATATCATCAGATGCTGCCGCAACTTTCAAGGAGTTATTGACCAGGCATAAATCCACTGTTTCAGAGTTTTTGTCTAAAAACTATGATGGGTTTTTCAGAGAATTCAACACTAAGTTGCTGCAATCCGCAGTTTATATTACAAAGCGTCAAGCTATCAAGCTTTTGGGAGATATCTTGCTTGATCGTTCAAACTCTGCCACCATGGTGCGGTATGTGAGCTCAAAAGACAACTTGATGATTCTCATGAATCTCCTAAGGGAACCAAGCAGGCCCATACAACTCGAAGCATTTCATATCTTTAAGCTATGTGTAGCTAACAAAAACAAGCCGCATGAAATCACAGCCATATTGATAGCTAACAGAAGCAAACTTCTTCGCTTCTTTAGTAATTTTACGTTGGACAAAGAGGATCAACAGTTTGAGGCTGACAAAGCTCAGGTGGTAAAGGAGATAGCGGAATTGGAGCCAAAAGAGATTCGATGA ATGCCTAATTTTTTGAAGACTATTCTCAAATTCAAGTCGAAGCTCAAGTCTAAGTCCAAGAAGAAGATTCGAACCCCGGGCGATAAGGTTCGTCGTGTTCGTGAGCTCTTGATTCTTCTTAATGATAATAACAATGTTGATCATGGGCCTAATTGGGTTGAAGAGATGAAAGAACTAGGTAAATACTTTGCGGATATTAAATTCACCCTATATGGCACTAGTGAAGCTGAACCTGTCCCAGAAGCTTGTGCACAAGTAACTCAAGAATTCTTCCAAGAAAATACTTTTCGTCTCCTAATAATTTGTCTTTCGAAACTGGACTTGGAGGCCCGAAAAGATGCTACCCAAGTGGTCGCAAATCTGCAAAGACAACAGGTTCATTCACGTTTAATTGCGTGTGAGTACTTGGAAAACAACATTGATCTCATTGATGTATTGGTCTCAGGGTATGAAGACCACAGACTAGCCTTGCACTATGGTAATATGCTCAGGGAGTGTATTCGTCATCAAACCATTGCAAAGTATGCGCTGGAAACGCACTTGTTCAAGTTTTTTGATTATATACAGCTTCCAGATTTTGAAATATCATCAGATGCTGCCGCAACTTTCAAGGAGTTATTGACCAGGCATAAATCCACTGTTTCAGAGTTTTTGTCTAAAAACTATGATGGGTTTTTCAGAGAATTCAACACTAAGTTGCTGCAATCCGCAGTTTATATTACAAAGCGTCAAGCTATCAAGCTTTTGGGAGATATCTTGCTTGATCGTTCAAACTCTGCCACCATGGTGCGGTATGTGAGCTCAAAAGACAACTTGATGATTCTCATGAATCTCCTAAGGGAACCAAGCAGGCCCATACAACTCGAAGCATTTCATATCTTTAAGCTATGTGTAGCTAACAAAAACAAGCCGCATGAAATCACAGCCATATTGATAGCTAACAGAAGCAAACTTCTTCGCTTCTTTAGTAATTTTACGTTGGACAAAGAGGATCAACAGTTTGAGGCTGACAAAGCTCAGGTGGTAAAGGAGATAGCGGAATTGGAGCCAAAAGAGATTCGATGA MPNFLKTILKFKSKLKSKSKKKIRTPGDKVRRVRELLILLNDNNNVDHGPNWVEEMKELGKYFADIKFTLYGTSEAEPVPEACAQVTQEFFQENTFRLLIICLSKLDLEARKDATQVVANLQRQQVHSRLIACEYLENNIDLIDVLVSGYEDHRLALHYGNMLRECIRHQTIAKYALETHLFKFFDYIQLPDFEISSDAAATFKELLTRHKSTVSEFLSKNYDGFFREFNTKLLQSAVYITKRQAIKLLGDILLDRSNSATMVRYVSSKDNLMILMNLLREPSRPIQLEAFHIFKLCVANKNKPHEITAILIANRSKLLRFFSNFTLDKEDQQFEADKAQVVKEIAELEPKEIR Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo19668.1 vs. NCBI nr
Match: gi|902158269|gb|KNA06202.1| (hypothetical protein SOVF_183220 [Spinacia oleracea]) HSP 1 Score: 688.0 bits (1774), Expect = 9.000e-195 Identity = 353/354 (99.72%), Postives = 353/354 (99.72%), Query Frame = 1
BLAST of Spo19668.1 vs. NCBI nr
Match: gi|731329940|ref|XP_010675860.1| (PREDICTED: putative MO25-like protein At5g47540 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 565.1 bits (1455), Expect = 8.800e-158 Identity = 290/349 (83.09%), Postives = 313/349 (89.68%), Query Frame = 1
BLAST of Spo19668.1 vs. NCBI nr
Match: gi|1021026977|gb|KZM84764.1| (hypothetical protein DCAR_027814 [Daucus carota subsp. sativus]) HSP 1 Score: 457.6 bits (1176), Expect = 2.000e-125 Identity = 235/338 (69.53%), Postives = 283/338 (83.73%), Query Frame = 1
BLAST of Spo19668.1 vs. NCBI nr
Match: gi|661892264|emb|CDP04490.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 457.6 bits (1176), Expect = 2.000e-125 Identity = 234/339 (69.03%), Postives = 281/339 (82.89%), Query Frame = 1
BLAST of Spo19668.1 vs. NCBI nr
Match: gi|747096095|ref|XP_011095951.1| (PREDICTED: putative MO25-like protein At5g47540 [Sesamum indicum]) HSP 1 Score: 456.1 bits (1172), Expect = 5.700e-125 Identity = 235/339 (69.32%), Postives = 279/339 (82.30%), Query Frame = 1
BLAST of Spo19668.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QG07_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_183220 PE=4 SV=1) HSP 1 Score: 688.0 bits (1774), Expect = 6.300e-195 Identity = 353/354 (99.72%), Postives = 353/354 (99.72%), Query Frame = 1
BLAST of Spo19668.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CLG7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g089790 PE=4 SV=1) HSP 1 Score: 565.1 bits (1455), Expect = 6.100e-158 Identity = 290/349 (83.09%), Postives = 313/349 (89.68%), Query Frame = 1
BLAST of Spo19668.1 vs. UniProtKB/TrEMBL
Match: A0A068U7F7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00017905001 PE=4 SV=1) HSP 1 Score: 457.6 bits (1176), Expect = 1.400e-125 Identity = 234/339 (69.03%), Postives = 281/339 (82.89%), Query Frame = 1
BLAST of Spo19668.1 vs. UniProtKB/TrEMBL
Match: A0A0C9S729_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_9849_1799 transcribed RNA sequence OS=Wollemia nobilis PE=4 SV=1) HSP 1 Score: 452.6 bits (1163), Expect = 4.400e-124 Identity = 231/339 (68.14%), Postives = 286/339 (84.37%), Query Frame = 1
BLAST of Spo19668.1 vs. UniProtKB/TrEMBL
Match: A0A067KD13_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13694 PE=4 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 4.900e-123 Identity = 234/342 (68.42%), Postives = 281/342 (82.16%), Query Frame = 1
BLAST of Spo19668.1 vs. ExPASy Swiss-Prot
Match: MO25N_ARATH (Putative MO25-like protein At5g47540 OS=Arabidopsis thaliana GN=At5g47540 PE=2 SV=1) HSP 1 Score: 426.8 bits (1096), Expect = 2.300e-118 Identity = 222/342 (64.91%), Postives = 277/342 (80.99%), Query Frame = 1
BLAST of Spo19668.1 vs. ExPASy Swiss-Prot
Match: MO25M_ARATH (Putative MO25-like protein At4g17270 OS=Arabidopsis thaliana GN=At4g17270 PE=2 SV=1) HSP 1 Score: 411.4 bits (1056), Expect = 1.000e-113 Identity = 217/337 (64.39%), Postives = 268/337 (79.53%), Query Frame = 1
BLAST of Spo19668.1 vs. ExPASy Swiss-Prot
Match: MO25L_ARATH (MO25-like protein At2g03410 OS=Arabidopsis thaliana GN=At2g03410 PE=2 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 8.600e-105 Identity = 202/344 (58.72%), Postives = 256/344 (74.42%), Query Frame = 1
BLAST of Spo19668.1 vs. ExPASy Swiss-Prot
Match: CAB39_BOVIN (Calcium-binding protein 39 OS=Bos taurus GN=CAB39 PE=2 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 7.600e-69 Identity = 144/331 (43.50%), Postives = 210/331 (63.44%), Query Frame = 1
BLAST of Spo19668.1 vs. ExPASy Swiss-Prot
Match: CAB39_HUMAN (Calcium-binding protein 39 OS=Homo sapiens GN=CAB39 PE=1 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 7.600e-69 Identity = 144/331 (43.50%), Postives = 210/331 (63.44%), Query Frame = 1
BLAST of Spo19668.1 vs. TAIR (Arabidopsis)
Match: AT5G47540.1 (Mo25 family protein) HSP 1 Score: 426.8 bits (1096), Expect = 1.300e-119 Identity = 222/342 (64.91%), Postives = 277/342 (80.99%), Query Frame = 1
BLAST of Spo19668.1 vs. TAIR (Arabidopsis)
Match: AT4G17270.1 (Mo25 family protein) HSP 1 Score: 411.4 bits (1056), Expect = 5.700e-115 Identity = 217/337 (64.39%), Postives = 268/337 (79.53%), Query Frame = 1
BLAST of Spo19668.1 vs. TAIR (Arabidopsis)
Match: AT2G03410.1 (Mo25 family protein) HSP 1 Score: 381.7 bits (979), Expect = 4.900e-106 Identity = 202/344 (58.72%), Postives = 256/344 (74.42%), Query Frame = 1
BLAST of Spo19668.1 vs. TAIR (Arabidopsis)
Match: AT5G18940.1 (Mo25 family protein) HSP 1 Score: 230.3 bits (586), Expect = 1.800e-60 Identity = 130/328 (39.63%), Postives = 202/328 (61.59%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo19668.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo19668.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo19668.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo19668.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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