Spo19674 (gene)

Overview
NameSpo19674
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionCRS1/YhbY (CRM) domain protein
LocationSpoScf_02187 : 66028 .. 68656 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATTGCTAATACTCAATTGTTCTCTTCACTTTTGTGTATCAATCATTATGTCAATCTTGATGCAAATTAAGGTTTTTTTTTGTTATGAAAGTCATATTCTGTATGAAAATGAGACTCTGGTATTAGTTCTTAAACAAGTGATTGCTCTATACTACAATTGCTGATATCCTTCTTCATGATTAGATAATCTAGTCAAATTCAGTTTCTTACAATTGCAATTGCCTGTAATTAGATACAGATTGTTTTTAGGAAGTATGATCACATGAAAAGCTTGAGAAGACAGCTATGCTTTGGAACATGACTATGCAGTAGATGAATGATACAGTTTTGAGGATGAGAAGATTACGTGATTAGGACGTGTCCTTTATTTTTGTAGGTCTCCCATGGCTAGTTCTTGCTTTCATTGCCTCAGACGGGCTGCTAGGTTCTCTGTGTCACTATTCAATACTTCCCAATTGGATTTTCTTTCTCCTAGGTACTCTCTCCTTCTTTACGCCCTTATTTTTAAAAGGCATCACTCACTAATATCCTTATTTTCTAACCTCTTTCTTTTCCTTCCAGGTTGACTTCGTATAATCCTGGAACCCTTTGGGGAATTTGCAGACCATTGTGTTTTCCATACACATCAGAACCCTGTTTAGTGTCCCGGAATTTCAGTTATGGCACAGTGAACTTGGTTATTTCTCAGGGGAAACCCAAATTTGAAGTCCAAGAAGTTGATCCTCCAAAGAAAGACAAGTGGAAGACGAAGAAGAGGCTCAAGATGCAGAGGTTGAGAGAGAAAAAAGAGAGGAAAGCAGCAAATAGAAGAGATCCACGGCGTCTCACTGTTAAGAGGAAGAAGCAAAAGTTTGCTAGTGTTGAGGATAGGATCAAAGACAAGCTCGAAAGGGTATCTTTTTTATCCTTGAGTATTGCATACTAAGTTCTGCGAATGTCTTTCTAGTTCTTTTTCTGTATGATTTTGTTGAATGTGCATCTTTTGTATAAAAAAATTCTGTCTTTCCTGATTCATTCATTTTTAGGTGTCTAATATCCTACAGTGGCTACAGATTATTGGTTGAATTGCCGATGCTTACTTTACATAGATTTGTAAGTTCAACCACTAACTAATGGCCTATATTCTATATCCACTAACTGTTGTTTAGGAAATTTACAAAAAGTTTGAGCCCTCATCTAGAGATTCCACCTTAGATAGGGAAGCCAGAGCCATTCCATCCAGATTGGTACCACTGCTCTAATGCTTAGGAACTTTTTGTTCTATTATTCTCGTGATTGTGAATTTTAGGTTGATTCCTTTTGTTTAATTTCATGGAATGATTTACAAAGATGATTGATTCTTTCAATTGAGCTTTGTTATATAAAAATTCCCCTTATCTTGCACCAAGCAAAGTCCCACATATACTTTTCTATATTTAAAGACACATTATTTACTTCCTCCACCCTAAAATTAAGTTCCTCTGGACCTTTTGCATGGAATGATTACCCATATGAGAACATTATTCCCGTATACCTAGACTATAAGCATGTATTAATGTATTATTCCAAACTACTCTGTACTAATTATTGAAGGAACGGATTTAAAAATGCATATATACCCAGGCCTTACTGCCTTCAGAAAGAAAGTAGTACCTTATTTGATGTTTAGGCAGGACAAGCTAATATTGGGCATTGACAGTTATTTTTCGCCATACCTTACAGGCAAGAATCAAAGAGGCTTTATTGGTTGAGCGCCTCAAAAAGTATGAAGTTCCAAAGGTTCAGGGTCCTGTTGTTCGACCACACAAGATAAATGGTGAGGAGAAGTTTTATTTCAAGAAGATGGCCCAGAAAAGGTCTAATTATGTTCCAGTTGGAAGAAGAGGTGTTTTTGGTGGTGTCATTCTCAACATGCATATGCACTGGAAGAAACATGAAACCGTGAAAGTCTTCTTTAAGCCTTGTAAACCAGGCCAAATACATGAATATGTGCAAGAAATAGAACGATTGAGTGGTGGTATAGCAATACAAATAATCGGAGATGACACCTCTATATTCTATAGAGGAAAGAACTATGTGCAACCGGAAATCATGTCACCCATTGATACACTGTCCAAGAAAAGGGTATGTTATCTCAAACGCACATATTTTACGTGTTCTCAAAAATCAAATTCATAGAAAGAAGTATCTTTTTCTAGGTATGTCCCTTTTATGCCATTTAATTCGGTAGGTTCAATTTTTCTGTGTTTTTCTGTTGCTAGGCCTTGGAGAAATCCAAGTATGAGCAATCACTGGAAACTGTGAGGCATTTCATTGCTGTTGCTGAAAAGGAATTGGAGCTTTATTACAGGCATATAGCACTGTATGGTATTTCAAACAAGCAGACATGTAGTACAATTGCTCAAAATTCAATAGAAGACTCAAATGATACTGTAAATCGTCATTTCACAAAAAGCAAAATTCTTGAGTCAACCCTCTATTCTACATGCGATCCTCAAATGGATTATGATTCCTCGGATCAAGAATTAAATGGTACTGGAAATGTGTCTTCCAGTGAGACAGAGCTAGATGGTGACTGCATGTCTGATGATGAAGACGATCTGGATTCTGAAGGGAGAGAGGAAGCTTTACCAAAATTAACGTAA

mRNA sequence

ATGGGAATTGCTAATACTCAATTGTTCTCTTCACTTTTGTTGACTTCGTATAATCCTGGAACCCTTTGGGGAATTTGCAGACCATTGTGTTTTCCATACACATCAGAACCCTGTTTAGTGTCCCGGAATTTCAGTTATGGCACAGTGAACTTGGTTATTTCTCAGGGGAAACCCAAATTTGAAGTCCAAGAAGTTGATCCTCCAAAGAAAGACAAGTGGAAGACGAAGAAGAGGCTCAAGATGCAGAGGTTGAGAGAGAAAAAAGAGAGGAAAGCAGCAAATAGAAGAGATCCACGGCGTCTCACTGTTAAGAGGAAGAAGCAAAAGTTTGCTAGTGTTGAGGATAGGATCAAAGACAAGCTCGAAAGGGCAAGAATCAAAGAGGCTTTATTGGTTGAGCGCCTCAAAAAGTATGAAGTTCCAAAGGTTCAGGGTCCTGTTGTTCGACCACACAAGATAAATGGTGAGGAGAAGTTTTATTTCAAGAAGATGGCCCAGAAAAGGTCTAATTATGTTCCAGTTGGAAGAAGAGGTGTTTTTGGTGGTGTCATTCTCAACATGCATATGCACTGGAAGAAACATGAAACCGTGAAAGTCTTCTTTAAGCCTTGTAAACCAGGCCAAATACATGAATATGTGCAAGAAATAGAACGATTGAGTGGTGGTATAGCAATACAAATAATCGGAGATGACACCTCTATATTCTATAGAGGAAAGAACTATGTGCAACCGGAAATCATGTCACCCATTGATACACTGTCCAAGAAAAGGGCCTTGGAGAAATCCAAGTATGAGCAATCACTGGAAACTGTGAGGCATTTCATTGCTGTTGCTGAAAAGGAATTGGAGCTTTATTACAGGCATATAGCACTGTATGGTATTTCAAACAAGCAGACATGTAGTACAATTGCTCAAAATTCAATAGAAGACTCAAATGATACTGTAAATCGTCATTTCACAAAAAGCAAAATTCTTGAGTCAACCCTCTATTCTACATGCGATCCTCAAATGGATTATGATTCCTCGGATCAAGAATTAAATGGTACTGGAAATGTGTCTTCCAGTGAGACAGAGCTAGATGGTGACTGCATGTCTGATGATGAAGACGATCTGGATTCTGAAGGGAGAGAGGAAGCTTTACCAAAATTAACGTAA

Coding sequence (CDS)

ATGGGAATTGCTAATACTCAATTGTTCTCTTCACTTTTGTTGACTTCGTATAATCCTGGAACCCTTTGGGGAATTTGCAGACCATTGTGTTTTCCATACACATCAGAACCCTGTTTAGTGTCCCGGAATTTCAGTTATGGCACAGTGAACTTGGTTATTTCTCAGGGGAAACCCAAATTTGAAGTCCAAGAAGTTGATCCTCCAAAGAAAGACAAGTGGAAGACGAAGAAGAGGCTCAAGATGCAGAGGTTGAGAGAGAAAAAAGAGAGGAAAGCAGCAAATAGAAGAGATCCACGGCGTCTCACTGTTAAGAGGAAGAAGCAAAAGTTTGCTAGTGTTGAGGATAGGATCAAAGACAAGCTCGAAAGGGCAAGAATCAAAGAGGCTTTATTGGTTGAGCGCCTCAAAAAGTATGAAGTTCCAAAGGTTCAGGGTCCTGTTGTTCGACCACACAAGATAAATGGTGAGGAGAAGTTTTATTTCAAGAAGATGGCCCAGAAAAGGTCTAATTATGTTCCAGTTGGAAGAAGAGGTGTTTTTGGTGGTGTCATTCTCAACATGCATATGCACTGGAAGAAACATGAAACCGTGAAAGTCTTCTTTAAGCCTTGTAAACCAGGCCAAATACATGAATATGTGCAAGAAATAGAACGATTGAGTGGTGGTATAGCAATACAAATAATCGGAGATGACACCTCTATATTCTATAGAGGAAAGAACTATGTGCAACCGGAAATCATGTCACCCATTGATACACTGTCCAAGAAAAGGGCCTTGGAGAAATCCAAGTATGAGCAATCACTGGAAACTGTGAGGCATTTCATTGCTGTTGCTGAAAAGGAATTGGAGCTTTATTACAGGCATATAGCACTGTATGGTATTTCAAACAAGCAGACATGTAGTACAATTGCTCAAAATTCAATAGAAGACTCAAATGATACTGTAAATCGTCATTTCACAAAAAGCAAAATTCTTGAGTCAACCCTCTATTCTACATGCGATCCTCAAATGGATTATGATTCCTCGGATCAAGAATTAAATGGTACTGGAAATGTGTCTTCCAGTGAGACAGAGCTAGATGGTGACTGCATGTCTGATGATGAAGACGATCTGGATTCTGAAGGGAGAGAGGAAGCTTTACCAAAATTAACGTAA

Protein sequence

MGIANTQLFSSLLLTSYNPGTLWGICRPLCFPYTSEPCLVSRNFSYGTVNLVISQGKPKFEVQEVDPPKKDKWKTKKRLKMQRLREKKERKAANRRDPRRLTVKRKKQKFASVEDRIKDKLERARIKEALLVERLKKYEVPKVQGPVVRPHKINGEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVFFKPCKPGQIHEYVQEIERLSGGIAIQIIGDDTSIFYRGKNYVQPEIMSPIDTLSKKRALEKSKYEQSLETVRHFIAVAEKELELYYRHIALYGISNKQTCSTIAQNSIEDSNDTVNRHFTKSKILESTLYSTCDPQMDYDSSDQELNGTGNVSSSETELDGDCMSDDEDDLDSEGREEALPKLT
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo19674.1Spo19674.1mRNA


Homology
BLAST of Spo19674.1 vs. NCBI nr
Match: gi|902222580|gb|KNA19210.1| (hypothetical protein SOVF_063670 [Spinacia oleracea])

HSP 1 Score: 730.3 bits (1884), Expect = 1.700e-207
Identity = 373/376 (99.20%), Postives = 373/376 (99.20%), Query Frame = 1

		  

Query: 9   FSSLLLTSYNPGTLWGICRPLCFPYTSEPCLVSRNFSYGTVNLVISQGKPKFEVQEVDPP 68
           F S  LTSYNPGTLWGICRPLCFPYTSEPCLVSRNFSYGTVNLVISQGKPKFEVQEVDPP
Sbjct: 27  FLSPRLTSYNPGTLWGICRPLCFPYTSEPCLVSRNFSYGTVNLVISQGKPKFEVQEVDPP 86

Query: 69  KKDKWKTKKRLKMQRLREKKERKAANRRDPRRLTVKRKKQKFASVEDRIKDKLERARIKE 128
           KKDKWKTKKRLKMQRLREKKERKAANRRDPRRLTVKRKKQKFASVEDRIKDKLERARIKE
Sbjct: 87  KKDKWKTKKRLKMQRLREKKERKAANRRDPRRLTVKRKKQKFASVEDRIKDKLERARIKE 146

Query: 129 ALLVERLKKYEVPKVQGPVVRPHKINGEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMH 188
           ALLVERLKKYEVPKVQGPVVRPHKINGEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMH
Sbjct: 147 ALLVERLKKYEVPKVQGPVVRPHKINGEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMH 206

Query: 189 MHWKKHETVKVFFKPCKPGQIHEYVQEIERLSGGIAIQIIGDDTSIFYRGKNYVQPEIMS 248
           MHWKKHETVKVFFKPCKPGQIHEYVQEIERLSGGIAIQIIGDDTSIFYRGKNYVQPEIMS
Sbjct: 207 MHWKKHETVKVFFKPCKPGQIHEYVQEIERLSGGIAIQIIGDDTSIFYRGKNYVQPEIMS 266

Query: 249 PIDTLSKKRALEKSKYEQSLETVRHFIAVAEKELELYYRHIALYGISNKQTCSTIAQNSI 308
           PIDTLSKKRALEKSKYEQSLETVRHFIAVAEKELELYYRHIALYGISNKQTCSTIAQNSI
Sbjct: 267 PIDTLSKKRALEKSKYEQSLETVRHFIAVAEKELELYYRHIALYGISNKQTCSTIAQNSI 326

Query: 309 EDSNDTVNRHFTKSKILESTLYSTCDPQMDYDSSDQELNGTGNVSSSETELDGDCMSDDE 368
           EDSNDTVNRHFTKSKILESTLYSTCDPQMDYDSSDQELNGTGNVSSSETELDGDCMSDDE
Sbjct: 327 EDSNDTVNRHFTKSKILESTLYSTCDPQMDYDSSDQELNGTGNVSSSETELDGDCMSDDE 386

Query: 369 DDLDSEGREEALPKLT 385
           DDLDSEGREEALPKLT
Sbjct: 387 DDLDSEGREEALPKLT 402

BLAST of Spo19674.1 vs. NCBI nr
Match: gi|731323048|ref|XP_010672222.1| (PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 547.0 bits (1408), Expect = 2.700e-152
Identity = 292/363 (80.44%), Postives = 314/363 (86.50%), Query Frame = 1

		  

Query: 10  SSLLLTSYNPGTLWGICRPLCFPYTSEPCLVSRNFSYGTVNLVISQGKPKFEVQEVDPPK 69
           SS  LTS+NPG +W  CR L F    +P LVSRNFS GTVNLVISQGKPKFEVQEVD PK
Sbjct: 58  SSSRLTSHNPGLIWKTCRSLGFANPLKPFLVSRNFSNGTVNLVISQGKPKFEVQEVDHPK 117

Query: 70  KDKWKTKKRLKMQRLREKKERKAANRRDPRRLTVKRKKQKFASVEDRIKDKLERARIKEA 129
           K+KW TKKRLKMQRLREK++RKAANRRDPRRLTVKRKKQKFASVE+RIKDKL +ARIKEA
Sbjct: 118 KEKWMTKKRLKMQRLREKQKRKAANRRDPRRLTVKRKKQKFASVEERIKDKLVKARIKEA 177

Query: 130 LLVERLKKYEVPKVQGPVVRPHKINGEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMHM 189
           LLVERLKKYEVPKVQGPVV+PH ++GEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMHM
Sbjct: 178 LLVERLKKYEVPKVQGPVVQPHILSGEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMHM 237

Query: 190 HWKKHETVKVFFKPCKPGQIHEYVQEIERLSGGIAIQIIGDDTSIFYRGKNYVQPEIMSP 249
           HWKKHETVKVFFKPCKPGQI EYVQEIERLSGGIAIQII DDT+IFYRGKNYVQP++MSP
Sbjct: 238 HWKKHETVKVFFKPCKPGQIQEYVQEIERLSGGIAIQIIEDDTAIFYRGKNYVQPKVMSP 297

Query: 250 IDTLSKKRALEKSKYEQSLETVRHFIAVAEKELELYYRHIALYGISNKQTCSTIAQNSIE 309
           IDTLSKKRALEKSKYEQSLET+RHFIAVAEKE ELYYRHIALY  SNKQ C  +AQN  +
Sbjct: 298 IDTLSKKRALEKSKYEQSLETLRHFIAVAEKESELYYRHIALYSNSNKQNCDVVAQNPSK 357

Query: 310 DSNDTVNRHFTKSKILESTLYSTCDPQMDYDSSDQELNGTGNVSSSETELDGDCMSDDED 369
           D+NDTVN HFTKS+ILE  L ST   +M  D       GT ++SSSE   D D MSDDED
Sbjct: 358 DANDTVNLHFTKSEILEPALNSTYHFEMVVD-------GTEDLSSSELVQDDDSMSDDED 413

Query: 370 DLD 373
           DLD
Sbjct: 418 DLD 413

BLAST of Spo19674.1 vs. NCBI nr
Match: gi|731323050|ref|XP_010672223.1| (PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 545.8 bits (1405), Expect = 6.000e-152
Identity = 290/359 (80.78%), Postives = 312/359 (86.91%), Query Frame = 1

		  

Query: 14  LTSYNPGTLWGICRPLCFPYTSEPCLVSRNFSYGTVNLVISQGKPKFEVQEVDPPKKDKW 73
           LTS+NPG +W  CR L F    +P LVSRNFS GTVNLVISQGKPKFEVQEVD PKK+KW
Sbjct: 34  LTSHNPGLIWKTCRSLGFANPLKPFLVSRNFSNGTVNLVISQGKPKFEVQEVDHPKKEKW 93

Query: 74  KTKKRLKMQRLREKKERKAANRRDPRRLTVKRKKQKFASVEDRIKDKLERARIKEALLVE 133
            TKKRLKMQRLREK++RKAANRRDPRRLTVKRKKQKFASVE+RIKDKL +ARIKEALLVE
Sbjct: 94  MTKKRLKMQRLREKQKRKAANRRDPRRLTVKRKKQKFASVEERIKDKLVKARIKEALLVE 153

Query: 134 RLKKYEVPKVQGPVVRPHKINGEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKK 193
           RLKKYEVPKVQGPVV+PH ++GEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKK
Sbjct: 154 RLKKYEVPKVQGPVVQPHILSGEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKK 213

Query: 194 HETVKVFFKPCKPGQIHEYVQEIERLSGGIAIQIIGDDTSIFYRGKNYVQPEIMSPIDTL 253
           HETVKVFFKPCKPGQI EYVQEIERLSGGIAIQII DDT+IFYRGKNYVQP++MSPIDTL
Sbjct: 214 HETVKVFFKPCKPGQIQEYVQEIERLSGGIAIQIIEDDTAIFYRGKNYVQPKVMSPIDTL 273

Query: 254 SKKRALEKSKYEQSLETVRHFIAVAEKELELYYRHIALYGISNKQTCSTIAQNSIEDSND 313
           SKKRALEKSKYEQSLET+RHFIAVAEKE ELYYRHIALY  SNKQ C  +AQN  +D+ND
Sbjct: 274 SKKRALEKSKYEQSLETLRHFIAVAEKESELYYRHIALYSNSNKQNCDVVAQNPSKDAND 333

Query: 314 TVNRHFTKSKILESTLYSTCDPQMDYDSSDQELNGTGNVSSSETELDGDCMSDDEDDLD 373
           TVN HFTKS+ILE  L ST   +M  D       GT ++SSSE   D D MSDDEDDLD
Sbjct: 334 TVNLHFTKSEILEPALNSTYHFEMVVD-------GTEDLSSSELVQDDDSMSDDEDDLD 385

BLAST of Spo19674.1 vs. NCBI nr
Match: gi|645231621|ref|XP_008222482.1| (PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Prunus mume])

HSP 1 Score: 427.6 bits (1098), Expect = 2.400e-116
Identity = 224/339 (66.08%), Postives = 276/339 (81.42%), Query Frame = 1

		  

Query: 40  VSRNFSYGTVNLVISQGKPKFEVQEVDPPKKDKWKTKKRLKMQRLREKKERKAANRRDPR 99
           V RN S+GTVNLVISQGKPKFE+ E+DPPKK+KWKTKKR K+QR+REK+ERKAANR+DPR
Sbjct: 55  VFRNLSHGTVNLVISQGKPKFEMHEIDPPKKEKWKTKKRFKLQRMREKQERKAANRKDPR 114

Query: 100 RLTVKRKK-QKFASVEDRIKDKLERARIKEALLVERLKKYEVPKVQGPVVRPHKINGEEK 159
           RL +KRKK QKFA+ E+RIK KLE+ARIKEALL+ERLK+YEVPKVQGP V+P  + GEE+
Sbjct: 115 RLGIKRKKRQKFATAEERIKYKLEKARIKEALLIERLKRYEVPKVQGPEVKPDDLTGEER 174

Query: 160 FYFKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVFFKPCKPGQIHEYVQEIER 219
           FY KKMAQK+SNY P+G+RG+FGGVILNMHMHWKKHETVKV  KPCKPGQ+HEY QEI R
Sbjct: 175 FYMKKMAQKKSNYAPIGKRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHEYAQEIAR 234

Query: 220 LSGGIAIQIIGDDTSIFYRGKNYVQPEIMSPIDTLSKKRALEKSKYEQSLETVRHFIAVA 279
           LSGGI IQI+GDDT +FYRGKNYVQP++MSP++TLSKK+ALEK KYEQSLE+VRHFIA+A
Sbjct: 235 LSGGIPIQIVGDDTIVFYRGKNYVQPKVMSPVNTLSKKKALEKFKYEQSLESVRHFIAIA 294

Query: 280 EKELELYYRHIALYGISNKQTCSTIAQNSIEDSNDTVNRHFTKSKILEST--LYSTCDPQ 339
           EKELELYYRHIALYG  N +   +I  +  E + ++ NR   + + L+ST   +S+    
Sbjct: 295 EKELELYYRHIALYGDPNDRNPLSILDSPTEKTKESGNRKILRKQKLDSTSDFFSSGLSG 354

Query: 340 MDYDSSDQELNGT-----GNVSSSETELDGDCMSDDEDD 371
            + DSS+ EL+ T      N+S SE++ + D +   +D+
Sbjct: 355 TEADSSNSELSETDGSEHDNLSLSESDSEDDKIYSSDDE 393

BLAST of Spo19674.1 vs. NCBI nr
Match: gi|567901040|ref|XP_006443008.1| (hypothetical protein CICLE_v10020228mg [Citrus clementina])

HSP 1 Score: 424.9 bits (1091), Expect = 1.500e-115
Identity = 231/349 (66.19%), Postives = 273/349 (78.22%), Query Frame = 1

		  

Query: 32  PYTSEPCLVSRNFSYGTVNLVISQGKPKFEVQEVDPPKKDKWKTKKRLKMQRLREKKERK 91
           P    P  V RN S+GTVNLVIS+GKPKFE  EV PPKK+KW+TKKR K+++ REK++RK
Sbjct: 42  PKPINPSWVWRNVSHGTVNLVISEGKPKFETHEVHPPKKEKWQTKKRFKLKKKREKQKRK 101

Query: 92  AANRRDPRRLTVK--RKKQKFASVEDRIKDKLERARIKEALLVERLKKYEVPKVQGPVVR 151
            AN+RDPRRLTVK  +KKQKFA+ EDRIK KLE+A+IKEALL+ERLK+YEVPKVQGPVV+
Sbjct: 102 DANKRDPRRLTVKGKKKKQKFANAEDRIKYKLEKAKIKEALLIERLKRYEVPKVQGPVVK 161

Query: 152 PHKINGEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVFFKPCKPGQI 211
           PH++ GEE+FYFKKMAQKRSNYVP+GRRGVFGGVILNMHMHWKKHETVKVF KP KPGQI
Sbjct: 162 PHELTGEERFYFKKMAQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPSKPGQI 221

Query: 212 HEYVQEIERLSGGIAIQIIGDDTSIFYRGKNYVQPEIMSPIDTLSKKRALEKSKYEQSLE 271
           HE+ +EI RLSGGI IQIIGDDT IFYRGKNYVQPEIMSPIDTLSKK+ALEKSKYEQSLE
Sbjct: 222 HEFAEEIARLSGGIPIQIIGDDTVIFYRGKNYVQPEIMSPIDTLSKKKALEKSKYEQSLE 281

Query: 272 TVRHFIAVAEKELELYYRHIALYGISNKQTCSTIAQNSIEDSNDTVNRHFTKSKILESTL 331
           +VR FIA+AEKELELYYRHIALYG  N +   +I  N  + + ++      + K L+ST 
Sbjct: 282 SVRRFIAMAEKELELYYRHIALYGDPNNRNPMSIMDNPSKVTQESWKFKMVERKSLDST- 341

Query: 332 YSTCDP---QMDYDSSDQELNGTGNVSSSE-TELDGDCMSDDEDDLDSE 375
           Y    P   + + DS+DQ L+    +     +  + D   D   D DS+
Sbjct: 342 YDALSPGASEAESDSTDQTLSELDYIEDEGLSTSESDSQDDSSSDFDSK 389

BLAST of Spo19674.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RIA4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_063670 PE=4 SV=1)

HSP 1 Score: 730.3 bits (1884), Expect = 1.200e-207
Identity = 373/376 (99.20%), Postives = 373/376 (99.20%), Query Frame = 1

		  

Query: 9   FSSLLLTSYNPGTLWGICRPLCFPYTSEPCLVSRNFSYGTVNLVISQGKPKFEVQEVDPP 68
           F S  LTSYNPGTLWGICRPLCFPYTSEPCLVSRNFSYGTVNLVISQGKPKFEVQEVDPP
Sbjct: 27  FLSPRLTSYNPGTLWGICRPLCFPYTSEPCLVSRNFSYGTVNLVISQGKPKFEVQEVDPP 86

Query: 69  KKDKWKTKKRLKMQRLREKKERKAANRRDPRRLTVKRKKQKFASVEDRIKDKLERARIKE 128
           KKDKWKTKKRLKMQRLREKKERKAANRRDPRRLTVKRKKQKFASVEDRIKDKLERARIKE
Sbjct: 87  KKDKWKTKKRLKMQRLREKKERKAANRRDPRRLTVKRKKQKFASVEDRIKDKLERARIKE 146

Query: 129 ALLVERLKKYEVPKVQGPVVRPHKINGEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMH 188
           ALLVERLKKYEVPKVQGPVVRPHKINGEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMH
Sbjct: 147 ALLVERLKKYEVPKVQGPVVRPHKINGEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMH 206

Query: 189 MHWKKHETVKVFFKPCKPGQIHEYVQEIERLSGGIAIQIIGDDTSIFYRGKNYVQPEIMS 248
           MHWKKHETVKVFFKPCKPGQIHEYVQEIERLSGGIAIQIIGDDTSIFYRGKNYVQPEIMS
Sbjct: 207 MHWKKHETVKVFFKPCKPGQIHEYVQEIERLSGGIAIQIIGDDTSIFYRGKNYVQPEIMS 266

Query: 249 PIDTLSKKRALEKSKYEQSLETVRHFIAVAEKELELYYRHIALYGISNKQTCSTIAQNSI 308
           PIDTLSKKRALEKSKYEQSLETVRHFIAVAEKELELYYRHIALYGISNKQTCSTIAQNSI
Sbjct: 267 PIDTLSKKRALEKSKYEQSLETVRHFIAVAEKELELYYRHIALYGISNKQTCSTIAQNSI 326

Query: 309 EDSNDTVNRHFTKSKILESTLYSTCDPQMDYDSSDQELNGTGNVSSSETELDGDCMSDDE 368
           EDSNDTVNRHFTKSKILESTLYSTCDPQMDYDSSDQELNGTGNVSSSETELDGDCMSDDE
Sbjct: 327 EDSNDTVNRHFTKSKILESTLYSTCDPQMDYDSSDQELNGTGNVSSSETELDGDCMSDDE 386

Query: 369 DDLDSEGREEALPKLT 385
           DDLDSEGREEALPKLT
Sbjct: 387 DDLDSEGREEALPKLT 402

BLAST of Spo19674.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CUP4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g057450 PE=4 SV=1)

HSP 1 Score: 547.0 bits (1408), Expect = 1.900e-152
Identity = 292/363 (80.44%), Postives = 314/363 (86.50%), Query Frame = 1

		  

Query: 10  SSLLLTSYNPGTLWGICRPLCFPYTSEPCLVSRNFSYGTVNLVISQGKPKFEVQEVDPPK 69
           SS  LTS+NPG +W  CR L F    +P LVSRNFS GTVNLVISQGKPKFEVQEVD PK
Sbjct: 58  SSSRLTSHNPGLIWKTCRSLGFANPLKPFLVSRNFSNGTVNLVISQGKPKFEVQEVDHPK 117

Query: 70  KDKWKTKKRLKMQRLREKKERKAANRRDPRRLTVKRKKQKFASVEDRIKDKLERARIKEA 129
           K+KW TKKRLKMQRLREK++RKAANRRDPRRLTVKRKKQKFASVE+RIKDKL +ARIKEA
Sbjct: 118 KEKWMTKKRLKMQRLREKQKRKAANRRDPRRLTVKRKKQKFASVEERIKDKLVKARIKEA 177

Query: 130 LLVERLKKYEVPKVQGPVVRPHKINGEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMHM 189
           LLVERLKKYEVPKVQGPVV+PH ++GEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMHM
Sbjct: 178 LLVERLKKYEVPKVQGPVVQPHILSGEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMHM 237

Query: 190 HWKKHETVKVFFKPCKPGQIHEYVQEIERLSGGIAIQIIGDDTSIFYRGKNYVQPEIMSP 249
           HWKKHETVKVFFKPCKPGQI EYVQEIERLSGGIAIQII DDT+IFYRGKNYVQP++MSP
Sbjct: 238 HWKKHETVKVFFKPCKPGQIQEYVQEIERLSGGIAIQIIEDDTAIFYRGKNYVQPKVMSP 297

Query: 250 IDTLSKKRALEKSKYEQSLETVRHFIAVAEKELELYYRHIALYGISNKQTCSTIAQNSIE 309
           IDTLSKKRALEKSKYEQSLET+RHFIAVAEKE ELYYRHIALY  SNKQ C  +AQN  +
Sbjct: 298 IDTLSKKRALEKSKYEQSLETLRHFIAVAEKESELYYRHIALYSNSNKQNCDVVAQNPSK 357

Query: 310 DSNDTVNRHFTKSKILESTLYSTCDPQMDYDSSDQELNGTGNVSSSETELDGDCMSDDED 369
           D+NDTVN HFTKS+ILE  L ST   +M  D       GT ++SSSE   D D MSDDED
Sbjct: 358 DANDTVNLHFTKSEILEPALNSTYHFEMVVD-------GTEDLSSSELVQDDDSMSDDED 413

Query: 370 DLD 373
           DLD
Sbjct: 418 DLD 413

BLAST of Spo19674.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CUX2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g057450 PE=4 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 4.200e-152
Identity = 290/359 (80.78%), Postives = 312/359 (86.91%), Query Frame = 1

		  

Query: 14  LTSYNPGTLWGICRPLCFPYTSEPCLVSRNFSYGTVNLVISQGKPKFEVQEVDPPKKDKW 73
           LTS+NPG +W  CR L F    +P LVSRNFS GTVNLVISQGKPKFEVQEVD PKK+KW
Sbjct: 34  LTSHNPGLIWKTCRSLGFANPLKPFLVSRNFSNGTVNLVISQGKPKFEVQEVDHPKKEKW 93

Query: 74  KTKKRLKMQRLREKKERKAANRRDPRRLTVKRKKQKFASVEDRIKDKLERARIKEALLVE 133
            TKKRLKMQRLREK++RKAANRRDPRRLTVKRKKQKFASVE+RIKDKL +ARIKEALLVE
Sbjct: 94  MTKKRLKMQRLREKQKRKAANRRDPRRLTVKRKKQKFASVEERIKDKLVKARIKEALLVE 153

Query: 134 RLKKYEVPKVQGPVVRPHKINGEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKK 193
           RLKKYEVPKVQGPVV+PH ++GEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKK
Sbjct: 154 RLKKYEVPKVQGPVVQPHILSGEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKK 213

Query: 194 HETVKVFFKPCKPGQIHEYVQEIERLSGGIAIQIIGDDTSIFYRGKNYVQPEIMSPIDTL 253
           HETVKVFFKPCKPGQI EYVQEIERLSGGIAIQII DDT+IFYRGKNYVQP++MSPIDTL
Sbjct: 214 HETVKVFFKPCKPGQIQEYVQEIERLSGGIAIQIIEDDTAIFYRGKNYVQPKVMSPIDTL 273

Query: 254 SKKRALEKSKYEQSLETVRHFIAVAEKELELYYRHIALYGISNKQTCSTIAQNSIEDSND 313
           SKKRALEKSKYEQSLET+RHFIAVAEKE ELYYRHIALY  SNKQ C  +AQN  +D+ND
Sbjct: 274 SKKRALEKSKYEQSLETLRHFIAVAEKESELYYRHIALYSNSNKQNCDVVAQNPSKDAND 333

Query: 314 TVNRHFTKSKILESTLYSTCDPQMDYDSSDQELNGTGNVSSSETELDGDCMSDDEDDLD 373
           TVN HFTKS+ILE  L ST   +M  D       GT ++SSSE   D D MSDDEDDLD
Sbjct: 334 TVNLHFTKSEILEPALNSTYHFEMVVD-------GTEDLSSSELVQDDDSMSDDEDDLD 385

BLAST of Spo19674.1 vs. UniProtKB/TrEMBL
Match: V4T7K8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020228mg PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 1.100e-115
Identity = 231/349 (66.19%), Postives = 273/349 (78.22%), Query Frame = 1

		  

Query: 32  PYTSEPCLVSRNFSYGTVNLVISQGKPKFEVQEVDPPKKDKWKTKKRLKMQRLREKKERK 91
           P    P  V RN S+GTVNLVIS+GKPKFE  EV PPKK+KW+TKKR K+++ REK++RK
Sbjct: 42  PKPINPSWVWRNVSHGTVNLVISEGKPKFETHEVHPPKKEKWQTKKRFKLKKKREKQKRK 101

Query: 92  AANRRDPRRLTVK--RKKQKFASVEDRIKDKLERARIKEALLVERLKKYEVPKVQGPVVR 151
            AN+RDPRRLTVK  +KKQKFA+ EDRIK KLE+A+IKEALL+ERLK+YEVPKVQGPVV+
Sbjct: 102 DANKRDPRRLTVKGKKKKQKFANAEDRIKYKLEKAKIKEALLIERLKRYEVPKVQGPVVK 161

Query: 152 PHKINGEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVFFKPCKPGQI 211
           PH++ GEE+FYFKKMAQKRSNYVP+GRRGVFGGVILNMHMHWKKHETVKVF KP KPGQI
Sbjct: 162 PHELTGEERFYFKKMAQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPSKPGQI 221

Query: 212 HEYVQEIERLSGGIAIQIIGDDTSIFYRGKNYVQPEIMSPIDTLSKKRALEKSKYEQSLE 271
           HE+ +EI RLSGGI IQIIGDDT IFYRGKNYVQPEIMSPIDTLSKK+ALEKSKYEQSLE
Sbjct: 222 HEFAEEIARLSGGIPIQIIGDDTVIFYRGKNYVQPEIMSPIDTLSKKKALEKSKYEQSLE 281

Query: 272 TVRHFIAVAEKELELYYRHIALYGISNKQTCSTIAQNSIEDSNDTVNRHFTKSKILESTL 331
           +VR FIA+AEKELELYYRHIALYG  N +   +I  N  + + ++      + K L+ST 
Sbjct: 282 SVRRFIAMAEKELELYYRHIALYGDPNNRNPMSIMDNPSKVTQESWKFKMVERKSLDST- 341

Query: 332 YSTCDP---QMDYDSSDQELNGTGNVSSSE-TELDGDCMSDDEDDLDSE 375
           Y    P   + + DS+DQ L+    +     +  + D   D   D DS+
Sbjct: 342 YDALSPGASEAESDSTDQTLSELDYIEDEGLSTSESDSQDDSSSDFDSK 389

BLAST of Spo19674.1 vs. UniProtKB/TrEMBL
Match: A0A061EJ15_THECC (RNA-binding CRS1 / YhbY domain protein OS=Theobroma cacao GN=TCM_020019 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 1.400e-115
Identity = 226/346 (65.32%), Postives = 267/346 (77.17%), Query Frame = 1

		  

Query: 32  PYTSEPCLVSRNFSYGTVNLVISQGKPKFEVQEVDPPKKDKWKTKKRLKMQRLREKKERK 91
           P    P  V RN S+GTV+LVISQGKPKFE  +VDPPKK+KWKTKKRLK+QR REK  RK
Sbjct: 98  PNARTPSWVLRNLSHGTVSLVISQGKPKFETHQVDPPKKEKWKTKKRLKLQRKREKANRK 157

Query: 92  AANRRDPRRLTVKRKKQKFASVEDRIKDKLERARIKEALLVERLKKYEVPKVQGPVVRPH 151
           AAN+RDPRRL +  KK+KFA+ E+RIK KLE+A+IKEALL+ERLK+YEVPK QGPVV PH
Sbjct: 158 AANKRDPRRLGLTGKKKKFANAEERIKYKLEKAKIKEALLLERLKRYEVPKAQGPVVEPH 217

Query: 152 KINGEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVFFKPCKPGQIHE 211
            + GEE+FY +KMAQKRSNYVPVGRRG+FGGVILNMHMHWKKHETVKV  KPCKPGQ+HE
Sbjct: 218 HLTGEEQFYMRKMAQKRSNYVPVGRRGIFGGVILNMHMHWKKHETVKVICKPCKPGQVHE 277

Query: 212 YVQEIERLSGGIAIQIIGDDTSIFYRGKNYVQPEIMSPIDTLSKKRALEKSKYEQSLETV 271
           Y  EI RLSGGI +QIIGDDT +FYRGKNYVQPE+MSPIDTLSKKRALEKSKYEQSLE+V
Sbjct: 278 YADEIARLSGGIPVQIIGDDTIVFYRGKNYVQPEVMSPIDTLSKKRALEKSKYEQSLESV 337

Query: 272 RHFIAVAEKELELYYRHIALYGISNKQTCSTIAQNSIEDSNDTVNRHFTKSKILESTL-- 331
           RHFIA+AEKELELYYRHIALYG  N +   +I     +D+ ++      + +  + T   
Sbjct: 338 RHFIAIAEKELELYYRHIALYGDPNNRNPISILDTPTKDTRESRKLKMLERESHDLTCEG 397

Query: 332 YSTCDPQMDYDSSDQELNGTGNVSSSETELDGDCMSDDEDDLDSEG 376
           +S+C    + DS  +EL      S +E +L G  +S  E D +  G
Sbjct: 398 FSSCTSVAEADSLGEEL------SETEDDLKGGDLSMRESDSEDNG 437

BLAST of Spo19674.1 vs. ExPASy Swiss-Prot
Match: Y3544_ARATH (Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana GN=At3g25440 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.800e-38
Identity = 87/183 (47.54%), Postives = 120/183 (65.57%), Query Frame = 1

		  

Query: 104 KRKKQKFASVEDRIKDKLERARIKEALLVERLKKYEVPKVQGPVVRPHKINGEEKFYFKK 163
           K+K+ +  + E++I +KL +AR KE  L+E +KK E  +       P  +  EE FY+ K
Sbjct: 128 KKKEFERMTSEEKILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLK 187

Query: 164 MAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVFFKPCKPGQIHEYVQEIERLSGGI 223
           M  K  NYVPVGRRG++ GVILNMH+HWKKH+T++V  K   P ++ E   E+ RL+GGI
Sbjct: 188 MGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGI 247

Query: 224 AIQIIGDDTSIFYRGKNYVQP--EIMSPIDTLSKKRALEKSKYEQSLETVRHFIAVAEKE 283
            + +   +T I YRGKNYVQP  EIMSP  TL +K+AL+KSK   +L  VR +I   E+E
Sbjct: 248 VLDVHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQE 307

Query: 284 LEL 285
           L+L
Sbjct: 308 LQL 310

BLAST of Spo19674.1 vs. ExPASy Swiss-Prot
Match: CFM3_ORYSJ (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=CFM3 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.100e-17
Identity = 83/296 (28.04%), Postives = 139/296 (46.96%), Query Frame = 1

		  

Query: 100 RLTVKRKKQKFASVEDRIKDKLERARIKEALLVERLKKYEVP-KVQGPVVRPHKINGEEK 159
           ++T   +  + A +  +++ KL+ A+ K       L K E   K    +  P  I  EE+
Sbjct: 538 KMTRTVEAARHADLVRKLEWKLQLAQKKIEKAERVLGKVETALKPTEGIQPPETITDEER 597

Query: 160 FYFKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVFFKPCKPGQIHEYVQEIER 219
           F F+K+  +   ++ +GRRGVF G I NMH+HWK  E VK+  K    G + +    +E 
Sbjct: 598 FMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKKIALSLEA 657

Query: 220 LSGGIAIQIIGDDTS-----IFYRGKNYVQPEIMSPIDTLSKKRALEKSKYEQSLETVRH 279
            SGGI + +  D  S     + +RGK+Y +P  + P + LSK++AL +S   Q  E + H
Sbjct: 658 ESGGILVSV--DKVSKGYAIVVFRGKDYARPSKLRPRNLLSKRKALARSIEIQRREALSH 717

Query: 280 FIAVAEKEL-ELYYRHIALYGISNKQTCSTIA---------QNSIEDSNDTVN-RHFTKS 339
            IA   + + +L    + + G+  +      A         +  +ED +D    R F  S
Sbjct: 718 HIATLNRRVKKLKAELLQMEGVKEEGDVELYAKLDSAYSSDEEDVEDEDDEAYLRSFDNS 777

Query: 340 KILESTLYSTCDPQMDYDSSDQELNGTGNVSSSETELDGDCMSDDEDDLDSEGREE 379
             +++      D +   D SD   +  G+ S  + + D D  +D+ED  D E  +E
Sbjct: 778 VAVQNG-----DDRTSLDGSDANSDDEGDYSDEDDDEDDD--NDEEDGFDYENDDE 824

BLAST of Spo19674.1 vs. ExPASy Swiss-Prot
Match: CRS1_ORYSJ (Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0360100 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 4.000e-15
Identity = 51/137 (37.23%), Postives = 75/137 (54.74%), Query Frame = 1

		  

Query: 156 EEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVFFKPCKPGQIHEYVQE 215
           EE+  F+K+  K   +V +GRRGVF GVI  +H HWK  E VKV  K  +  QI      
Sbjct: 569 EERRIFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQASQITYTSMM 628

Query: 216 IERLSGGIAIQIIGDDTS---IFYRGKNYVQPEIMSPIDTLSKKRALEKSKYEQSLETVR 275
           +E  +GG  I I    TS   I YRGKNY +P   +P + L+K+ AL++S   Q   +++
Sbjct: 629 LEVETGGTLIAIERFTTSHAIILYRGKNYRRPTKSAPSNLLTKREALQRSIEVQRRGSMK 688

Query: 276 HFIAVAEKELELYYRHI 290
           +F    +K ++   R +
Sbjct: 689 YFAQERKKSIDELKREL 705

BLAST of Spo19674.1 vs. ExPASy Swiss-Prot
Match: CFM3_MAIZE (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays GN=CFM3 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 5.300e-15
Identity = 64/233 (27.47%), Postives = 106/233 (45.49%), Query Frame = 1

		  

Query: 150 PHKINGEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVFFKPCKPGQI 209
           P  I  EE+F F+K+  +   ++ +GRRGVF G I NMH+HWK  E VK+  K      +
Sbjct: 581 PETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFADV 640

Query: 210 HEYVQEIERLSGGIAIQIIGDDTS-----IFYRGKNYVQPEIMSPIDTLSKKRALEKS-K 269
                 +E  SGGI + +  D  S     + +RGKNY +P  + P + LSK++AL +S +
Sbjct: 641 KRIALSLEAESGGILVSV--DKVSKGYAIVVFRGKNYRRPSSLRPRNLLSKRKALARSIE 700

Query: 270 YEQSLETVRHFIAVAEKELELYYRHIALYGISNKQTCSTIAQ-NSIEDSNDTVNRHFTKS 329
            ++     RHF  +  K   L    + +  +  +      A+ ++   S+D         
Sbjct: 701 LQRHQALSRHFAKLNRKVERLKAELVQMEDVKEQGDEELYAKLDAAYSSDDEDMEDEDDE 760

Query: 330 KILESTLYSTCDPQMDYDSSDQELNGTGNVSSSETELD-GDCMSDDEDDLDSE 375
             L+           D D SD   +        +++ + GDC  D+ +D + E
Sbjct: 761 AYLKRFDNEVAGATADDDGSDDYTSAADEADYPDSDDEAGDCSEDEGEDDEDE 811

BLAST of Spo19674.1 vs. ExPASy Swiss-Prot
Match: CRS1_MAIZE (Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 5.300e-15
Identity = 49/130 (37.69%), Postives = 72/130 (55.38%), Query Frame = 1

		  

Query: 156 EEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVFFKPCKPGQIHEYVQE 215
           EEK  F+++ +K    V +GRRG+F GVI  +H HWK  E VKV  K  +  QI      
Sbjct: 567 EEKIMFRRIGRKMDGLVLLGRRGIFDGVIEEIHQHWKHKEVVKVITKQNQTRQIMYAASL 626

Query: 216 IERLSGGIAIQIIGDDTS---IFYRGKNYVQPEIMSPIDTLSKKRALEKSKYEQSLETVR 275
           +E  +GGI I +    TS   I YRGKNY +P   S  + L+K+ AL +S   Q   +++
Sbjct: 627 LEVETGGILIAVEKLTTSHAIILYRGKNYRRPAKSSFSNLLTKREALRRSIEVQRRGSMK 686

Query: 276 HFIAVAEKEL 283
           +F+   +K +
Sbjct: 687 YFVRERQKSI 696

BLAST of Spo19674.1 vs. TAIR (Arabidopsis)
Match: AT2G28480.1 (RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 394.0 bits (1011), Expect = 1.000e-109
Identity = 209/326 (64.11%), Postives = 253/326 (77.61%), Query Frame = 1

		  

Query: 40  VSRNFS--YGTVNLVISQGKPKFEVQEVDPPKKDKWKTKKRLKMQRLREKKERKAANRRD 99
           + RNFS  YGTVNLVIS+GKPKFE +E+DPPKK KW TKKRLK++R +E++ER AANR+D
Sbjct: 49  ICRNFSHGYGTVNLVISEGKPKFETRELDPPKKYKWLTKKRLKLKRKKEREERNAANRKD 108

Query: 100 PRRLTVKRKKQKFASVEDRIKDKLERARIKEALLVERLKKYEVPKVQGPVVRPHKINGEE 159
           PRRLTVK KK+KF + E+RIK KLE+A+IKEALL+ERLK+YEV KVQGP VRPH+I GEE
Sbjct: 109 PRRLTVKGKKKKFVNAEERIKYKLEKAKIKEALLIERLKRYEVAKVQGPEVRPHEITGEE 168

Query: 160 KFYFKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVFFKPCKPGQIHEYVQEIE 219
           +FY KKM QKRSNYVP+GRRGVFGGVILNMH+HWKKHETVKV     KPGQ+ +Y +E+ 
Sbjct: 169 RFYLKKMGQKRSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICNNSKPGQVQQYAEELA 228

Query: 220 RLSGGIAIQIIGDDTSIFYRGKNYVQPEIMSPIDTLSKKRALEKSKYEQSLETVRHFIAV 279
           +LSGG+ + IIGDDT IFYRGK YVQP++MSPIDTLSKKRA EKSKYEQSLE+VRHFIA+
Sbjct: 229 KLSGGVPVNIIGDDTIIFYRGKGYVQPQVMSPIDTLSKKRAYEKSKYEQSLESVRHFIAI 288

Query: 280 AEKELELYYRHIALYGISNKQTCSTIAQNSIEDSNDTVNRHFTKSKILESTLYSTCDPQM 339
           AEKELELYYRH+ALY   N +   +I  +S  +S       F  S        S  D   
Sbjct: 289 AEKELELYYRHVALYDDPNNRNPLSILDDSPSESRQHHENEFFLS-------CSDTDSSS 348

Query: 340 DYDSSDQEL----NGTGNVSSSETEL 360
           + +  D+EL    NG+ + SS++ EL
Sbjct: 349 EDEDEDEELCELDNGSSSSSSAKEEL 367

BLAST of Spo19674.1 vs. TAIR (Arabidopsis)
Match: AT4G13070.1 (RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 209.9 bits (533), Expect = 2.700e-54
Identity = 118/250 (47.20%), Postives = 159/250 (63.60%), Query Frame = 1

		  

Query: 42  RNFSYGTVNLVISQGKPKFEVQEVDPPKKDKWKTKKRLKMQRLREKKERKAANRRDPRRL 101
           R  S  T+ L       +F    V     +   T+K  K +R +  ++ K    R  R  
Sbjct: 73  RYLSNSTIELRTDDNVVRFAFNNVSSSGNNVVPTRKEKKWKRAKLSRKAKVNELRFYRLK 132

Query: 102 TVKRKKQKFASVEDRIKDKLERARIKEALLVERLKKYEVPKVQGPVVRPHKINGEEKFYF 161
              +KK    + E RI+ KLE+A+ KE  L+E+L+KY+VPK       P  +  EE+ Y 
Sbjct: 133 A--KKKMNSPNPEVRIRYKLEKAKRKEEWLIEKLRKYDVPKSPAEPYDPESLTEEEQHYL 192

Query: 162 KKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVFFKPC-KPGQIHEYVQEIERLS 221
           K+  +KR N+V VGRRGVFGGV+LN+H+HWKKHETVKV  KPC KPGQ+HEY +E+ RLS
Sbjct: 193 KRTGEKRKNFVLVGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELARLS 252

Query: 222 GGIAIQIIGDDTSIFYRGKNYVQPEIMSPIDTLSKKRALEKSKYEQSLETVRHFIAVAEK 281
            GI I +  ++T + YRGKNYV+PE+MSP+DTLSK +ALEK +YEQSLE    FI   EK
Sbjct: 253 KGIVIDVKPNNTIVLYRGKNYVRPEVMSPVDTLSKDKALEKYRYEQSLEHTSEFIEKLEK 312

Query: 282 ELELYYRHIA 291
           ELE Y++++A
Sbjct: 313 ELEEYHKYVA 320

BLAST of Spo19674.1 vs. TAIR (Arabidopsis)
Match: AT3G25440.1 (RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 148.3 bits (373), Expect = 9.800e-36
Identity = 98/231 (42.42%), Postives = 139/231 (60.17%), Query Frame = 1

		  

Query: 58  PKFEVQEVDPPKKDKWKTKKRLKMQRLREKKER-KAANRRDPRRLTVKRKKQ-KFASVED 117
           P  E  + D  K +   ++      +L+ KK + K A  R  +    K+KK+ +  + E+
Sbjct: 80  PARETGDDDISKSENSSSQDGDSCTKLKRKKLKGKRAVVRWLKFFRWKKKKEFERMTSEE 139

Query: 118 RIKDKLERARIKEALLVERLKKYEVPKVQGPVVRPHKINGEEKFYFKKMAQKRSNYVPVG 177
           +I +KL +AR KE  L+E +KK E  +       P  +  EE FY+ KM  K  NYVPVG
Sbjct: 140 KILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVG 199

Query: 178 RRGVFGGVILNMHMHWKKHETVKVFFKPCKPGQIHEYVQEIERLSGGIAIQIIGDDTSIF 237
           RRG++ GVILNMH+HWKKH+T++V  K   P ++ E   E+ RL+GGI + +   +T I 
Sbjct: 200 RRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIM 259

Query: 238 YRGKNYVQP--EIMSPIDTLSKKRALEKSKYEQSLETVRHFIAVAEKELEL 285
           YRGKNYVQP  EIMSP  TL +K+AL+KSK   +L  VR +I   E+EL+L
Sbjct: 260 YRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQL 310

BLAST of Spo19674.1 vs. TAIR (Arabidopsis)
Match: AT3G27550.1 (RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 138.3 bits (347), Expect = 1.000e-32
Identity = 107/306 (34.97%), Postives = 166/306 (54.25%), Query Frame = 1

		  

Query: 75  TKKRLKMQRLREKKERKAANR--RDPRRLTVKRKKQKFASVEDRIKDKLERARIKEALLV 134
           T +   M+   E + RK + +  R+ RR   K+ K+K  + E+R+   L+RA+ K ALL+
Sbjct: 14  TSRGRSMRSKVESRMRKESGKTLREIRR--AKKLKKKLMTDEERLIYNLKRAKKKVALLL 73

Query: 135 ERLKKYEVPKVQGPVVRPHKINGEEKFYFKKMAQKRSNYVPVGRRGVFGGVILNMHMHWK 194
           ++LKKY++P++  PV  P     E+   FKK+  K  NYVPVG RGVFGGV+ NMHMHWK
Sbjct: 74  QKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMHMHWK 133

Query: 195 KHETVKVFFKPCKPGQIHEYVQEIERLSGGIAIQIIGDDTSIFYRGKNYVQPEIMSPIDT 254
            HETV+V        +I E    I RLSGG+ I I    T I +RG+NY QP+ + P++T
Sbjct: 134 FHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVKTIIMFRGRNYRQPKNLIPVNT 193

Query: 255 LSKKRALEKSKYEQSLETVRHFIAVAEKELELYYRHIALYGISNKQTCSTIAQNSIEDSN 314
           L+K++AL K+++EQ+LE+ +  I   E++L          G++ +     +A  SI    
Sbjct: 194 LTKRKALFKARFEQALESQKLNIKKTEQQLR-------RMGVNPE---DPVAMASIHRVA 253

Query: 315 DTVNRHFTKSKILESTLYSTCDPQMDYDSSDQELNGTGNVSSSETELDGDCMSDDEDDLD 374
            T      K +      +     +      ++E +  G+  S + ELD   +++ E+  D
Sbjct: 254 STFFNAIDKKEGTPYVFHGDKQSERGTSVDNREESEPGDEDSDQEELD-RFIAEIEEAAD 306

Query: 375 SEGREE 379
            E  EE
Sbjct: 314 KEWEEE 306

BLAST of Spo19674.1 vs. TAIR (Arabidopsis)
Match: AT3G18390.1 (CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 97.4 bits (241), Expect = 2.000e-20
Identity = 63/177 (35.59%), Postives = 94/177 (53.11%), Query Frame = 1

		  

Query: 111 ASVEDRIKDKLERARIKEALLVERLKKYEVPKV-QGPVVRPHKINGEEKFYFKKMAQKRS 170
           A V  RI+ KL  A+ K     + L K E   +  GP      I+ EE+  F+K+  K  
Sbjct: 610 ARVVKRIQHKLNLAQSKFQRAEKLLSKIEASMIPNGPDYDQEVISEEERAMFRKVGLKMK 669

Query: 171 NYVPVGRRGVFGGVILNMHMHWKKHETVKVFFKPCKPGQIHEYVQEIERLSGGIAI---Q 230
            Y+P+G RGVF GVI NMH+HWK  E VK+  K      + E  + +E  SGG+ +   +
Sbjct: 670 AYLPIGIRGVFDGVIENMHLHWKHRELVKLISKQKNQAFVEETARLLEYESGGVLVAIEK 729

Query: 231 IIGDDTSIFYRGKNYVQPEIMSPIDTLSKKRALEKSKYEQSLETVRHFIAVAEKELE 284
           +      I+YRGKNY +P  + P + L+K +AL++S   Q  E +   I+  E+ +E
Sbjct: 730 VPKGFALIYYRGKNYRRPISLRPRNLLTKAKALKRSIAMQRHEALSQHISELERTIE 786

The following BLAST results are available for this feature:
BLAST of Spo19674.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902222580|gb|KNA19210.1|1.7e-20799.2hypothetical protein SOVF_0636... [more]
gi|731323048|ref|XP_010672222.1|2.7e-15280.4PREDICTED: uncharacterized CRM... [more]
gi|731323050|ref|XP_010672223.1|6.0e-15280.7PREDICTED: uncharacterized CRM... [more]
gi|645231621|ref|XP_008222482.1|2.4e-11666.0PREDICTED: uncharacterized CRM... [more]
gi|567901040|ref|XP_006443008.1|1.5e-11566.1hypothetical protein CICLE_v10... [more]
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BLAST of Spo19674.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RIA4_SPIOL1.2e-20799.2Uncharacterized protein OS=Spi... [more]
A0A0J8CUP4_BETVU1.9e-15280.4Uncharacterized protein OS=Bet... [more]
A0A0J8CUX2_BETVU4.2e-15280.7Uncharacterized protein OS=Bet... [more]
V4T7K8_9ROSI1.1e-11566.1Uncharacterized protein OS=Cit... [more]
A0A061EJ15_THECC1.4e-11565.3RNA-binding CRS1 / YhbY domain... [more]
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BLAST of Spo19674.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
Y3544_ARATH5.8e-3847.5Uncharacterized CRM domain-con... [more]
CFM3_ORYSJ1.1e-1728.0CRM-domain containing factor C... [more]
CRS1_ORYSJ4.0e-1537.2Chloroplastic group IIA intron... [more]
CFM3_MAIZE5.3e-1527.4CRM-domain containing factor C... [more]
CRS1_MAIZE5.3e-1537.6Chloroplastic group IIA intron... [more]
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BLAST of Spo19674.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT2G28480.11.0e-10964.1RNA-binding CRS1 / YhbY (CRM) ... [more]
AT4G13070.12.7e-5447.2RNA-binding CRS1 / YhbY (CRM) ... [more]
AT3G25440.19.8e-3642.4RNA-binding CRS1 / YhbY (CRM) ... [more]
AT3G27550.11.0e-3234.9RNA-binding CRS1 / YhbY (CRM) ... [more]
AT3G18390.12.0e-2035.5CRS1 / YhbY (CRM) domain-conta... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001890RNA-binding, CRM domainGENE3D3.30.110.60coord: 153..246
score: 8.3
IPR001890RNA-binding, CRM domainPFAMPF01985CRS1_YhbYcoord: 154..237
score: 8.7
IPR001890RNA-binding, CRM domainSMARTSM01103CRS1_YhbY_2coord: 153..237
score: 1.3
IPR001890RNA-binding, CRM domainPROFILEPS51295CRMcoord: 151..248
score: 16
IPR001890RNA-binding, CRM domainunknownSSF75471YhbY-likecoord: 153..246
score: 5.89
NoneNo IPR availableunknownCoilCoilcoord: 103..123
score: -coord: 76..96
scor
NoneNo IPR availablePANTHERPTHR31426FAMILY NOT NAMEDcoord: 33..379
score: 3.0E
NoneNo IPR availablePANTHERPTHR31426:SF2SUBFAMILY NOT NAMEDcoord: 33..379
score: 3.0E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044238 primary metabolic process
biological_process GO:0009887 animal organ morphogenesis
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006346 methylation-dependent chromatin silencing
biological_process GO:0010073 meristem maintenance
biological_process GO:0006306 DNA methylation
biological_process GO:0007267 cell-cell signaling
biological_process GO:0019985 translesion synthesis
biological_process GO:0006366 transcription by RNA polymerase II
biological_process GO:0010224 response to UV-B
biological_process GO:0010212 response to ionizing radiation
biological_process GO:0043687 post-translational protein modification
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0000724 double-strand break repair via homologous recombination
biological_process GO:0051301 cell division
biological_process GO:0071494 cellular response to UV-C
biological_process GO:0006397 mRNA processing
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0010050 vegetative phase change
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0002679 respiratory burst involved in defense response
biological_process GO:0006396 RNA processing
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0016070 RNA metabolic process
biological_process GO:0006312 mitotic recombination
biological_process GO:0006569 tryptophan catabolic process
biological_process GO:0048829 root cap development
biological_process GO:0010200 response to chitin
biological_process GO:0009737 response to abscisic acid
biological_process GO:0009252 peptidoglycan biosynthetic process
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0010311 lateral root formation
biological_process GO:0009684 indoleacetic acid biosynthetic process
biological_process GO:0006542 glutamine biosynthetic process
biological_process GO:0006570 tyrosine metabolic process
biological_process GO:0098507 polynucleotide 5' dephosphorylation
biological_process GO:0035335 peptidyl-tyrosine dephosphorylation
biological_process GO:0006266 DNA ligation
biological_process GO:0006370 7-methylguanosine mRNA capping
biological_process GO:0009616 virus induced gene silencing
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0006260 DNA replication
biological_process GO:0071555 cell wall organization
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0033044 regulation of chromosome organization
biological_process GO:0045595 regulation of cell differentiation
biological_process GO:0043547 positive regulation of GTPase activity
biological_process GO:0009944 polarity specification of adaxial/abaxial axis
biological_process GO:0048519 negative regulation of biological process
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0010014 meristem initiation
biological_process GO:0048439 flower morphogenesis
biological_process GO:0009733 response to auxin
biological_process GO:0048449 floral organ formation
biological_process GO:0006897 endocytosis
biological_process GO:0048589 developmental growth
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0007064 mitotic sister chromatid cohesion
biological_process GO:0016049 cell growth
biological_process GO:0007155 cell adhesion
biological_process GO:0045010 actin nucleation
biological_process GO:0043087 regulation of GTPase activity
biological_process GO:0006468 protein phosphorylation
biological_process GO:0048765 root hair cell differentiation
biological_process GO:0051321 meiotic cell cycle
biological_process GO:0010090 trichome morphogenesis
biological_process GO:0030261 chromosome condensation
biological_process GO:0006310 DNA recombination
biological_process GO:0006281 DNA repair
biological_process GO:0008152 metabolic process
biological_process GO:0010051 xylem and phloem pattern formation
biological_process GO:0010089 xylem development
cellular_component GO:0016459 myosin complex
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
cellular_component GO:0008278 cohesin complex
cellular_component GO:0000785 chromatin
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0031461 cullin-RING ubiquitin ligase complex
cellular_component GO:0045298 tubulin complex
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005719 nuclear euchromatin
cellular_component GO:0035101 FACT complex
cellular_component GO:0016035 zeta DNA polymerase complex
cellular_component GO:0030140 trans-Golgi network transport vesicle
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
molecular_function GO:0043015 gamma-tubulin binding
molecular_function GO:0004525 ribonuclease III activity
molecular_function GO:0008017 microtubule binding
molecular_function GO:0005488 binding
molecular_function GO:0004356 glutamate-ammonia ligase activity
molecular_function GO:0043621 protein self-association
molecular_function GO:0005524 ATP binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0097159 organic cyclic compound binding
molecular_function GO:0035091 phosphatidylinositol binding
molecular_function GO:0008138 protein tyrosine/serine/threonine phosphatase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005096 GTPase activator activity
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0004725 protein tyrosine phosphatase activity
molecular_function GO:0003887 DNA-directed DNA polymerase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0003774 motor activity
molecular_function GO:0003779 actin binding
molecular_function GO:0003910 DNA ligase (ATP) activity
molecular_function GO:0004484 mRNA guanylyltransferase activity
molecular_function GO:0004651 polynucleotide 5'-phosphatase activity
molecular_function GO:0003723 RNA binding
RNA-Seq Expression