Spo19703 (gene)

Overview
NameSpo19703
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_02502 : 40259 .. 44223 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCCTTGGGTGATGTCAGTTTCAACATAAAATTTTACACATCAATGGATTGAAGTTTTAGGTGAGCGGAGAAGTGTTGATGGGTAAGGACTAAGGAGTATTCTAACCAATGCTTTGACAGAGGTAGCACCAGTCAAGTGCTTGGTGCAGAGATCCTCTTTGGGAACAAGCTTTTACTAGCTAGGAGAAGAAGGGGAAGATTATGTGTGCCTTGTGTAGGACATTCCTCGGCGAATGGATGTTTGCGTGCAGTAACATTGCGAGCCACTGCCGATCTTTCTCTCTCTTGAGATCTGTGTGCAGTAACAGACAGACAGTGCATAGTTGCTTCATTAGTTTTGATTTAGCATAAAATCTGATTATGGGAAGGAAGTTATGTTTAGTTTGATATTGATTTCATGTCTCACATTTTGATCGACTTCTAATTAGTATGAGTAATTCTTTATGGTTTCTCCAGCTTTTGATTTAGTTGCGATGAGTGACTAAACTGCTAGCCGTGGTAGTATGATGTGCTTGCTTATATGCTTATTTCTTGTAAGTAATTCAACAAATTGATTTCCACCAGATGAGCATGTTAGCTAACTTTCGTTCTATTCATGTTCGTTTGATTTGACAAGTTGTAGATGTTCTTAAAACGCAAGAACCACAACTGATTCTGTCGATTCCTCTTTTGCAAGCTCCCTTCTCAGTTTCTATCTTCTTTGTGTTGGTTGCAACAACTCTTCACCGGCGGTAACAATGGTCGTCGGCCGTCATAACATGTTATCTTGAGATTAATCAAACCTGAAGATTTTGCACCGATGTCTCAAATACTCTTCCAGAAAACCAGACCTTGATTTCTCTCTCTTTCAATCCCTAATTTATGTAAGTTCAATTCTCACATAGTTTTTATTTCATTAATTTCAAGCTTTTAGAATTTTGATTTCTTCTCAATGATAATTAGTTTTGTTTGTGTTAATCGGAAAGAGACGATCAGATTGGGCATGCGATAAAAAAATCAGAAAAGGAAAAATCCAATTGGGTATTTGTAGGAATCCTGGTTTACAAAGCATAAGTCAACTTCTTTGGAATTTTTGATAAAATTTAATACTCTATCTTAGTGTTTCCTTTGATTAAATACGTAGATACTGAAATGAAATTATTGTGTTATAATCGTCTATATTGTTGCAAATTTGGCTGCAAAAGGTGATGGACTCCAGTTGTTAATTGAATCTGCTACAAAGTATTTGAATTTTTCCACCTATATTGTTAGAAAACTTCGTGATTTGAGTCATTTGTCTCACCATGATCTTGCAGAAACAAATCAAGGGAAGATTGTAGAGGCAGGTGGCCGGGATTACTTCCTTGTGTTGAATCTTCTTAGAAGCTCTGAGAATGAGACCATACATCGAGTTGCTGCTGGCGTTATTGCGAATTAAGCAATGAATGGTGAGTTTAGCTAACCCTTGTTTCTGGCTTCTTCCATTCTCTTTTCCTTTTTGTGCTATTAAGTTGCTCTTTTCTTGCCACTTCTTAAACCAACCAAGAGCTGATTATGGCCCAAGGTGTCGGTTTACCATCAACAACTGCTACTAATGCAGAGGATCCCCAAACCCTTCACATGATTGCTGAAGCAATCGCTAATATTTGTGGCAATGGTAAAACATAAATTTCATAAATGTTTGAATTCCGAAGTGTCTTAATTAAGATTTATTGTTTTTCCTTCTTGTACTGAAGGACCTTGGGGTCGTAGATGTTCGATCTTAAGCAGTTCCAACTGTAGTTTCAGCTTGTCTGCATCTGCTAGTTCTTGTTTTCTTTGTGCTTGTAGATAATGATATATGAGCTTATTTTCCGGTTTGCCCCCACTACTAGAAAATACTCTGATGTAGTTTTTTTCATCAATAATTAGATATATTTACCTGCAAAACAAACTCGATATTTAAAAAAAAAGGAGACAACTGCTAGCATGTCTAGCATATGCAGAAAGAGATTATGAGGGGTGGTTACTTGGTAGAGGTCTAGTTAGGTCTAAATAAGAAGGTTGGTGACACAACAAACTGTTTCAGCTAAGCCTTGACTCAAGAAAAGGCTAGGCTAGTGGGTCAAGATGGACCACGCCAAGTGAGAGTAGGACCATGCTCATCAAAAGAAATTAATGTCTTCTGATTGTATTTTCCATGGAAGTACTGTATGAGGAAAAGAAAACTATAATGTCCTTGTCAAATACAACCGTTACTACAAATTTCAAGGAACTAAAATATGGAAGAAAATAGAGAATATTACCTGCATTGTTGTATTTATCATCCACATATTAGTGTGTGCAATAGAGAAAATGATCTTCGCATCCACCTCCTTTTCCACATATATATCTGAATGAAGTTGATATAGGGTAGTTTGCTTTGCTTGTCAGACCTTAGTGATCATCCTGTTAGCTGGCAAACAAAAACACACTTCTAAGAGTCCCATCACCTAACGCTACCTTGGAATTCAAGGGAAATCCCCTCTTTCAACAACATGAGGTGTTAACTAACTAACTAACTACTACGGAGTACTAAAACCCACAGATACTGAACTAGCTTGTTTACATGTATAGAGCAGTAGGGTTATCTTAGGCAATAAAGAGAAATCTGCTGTACATTACTAACCCGAGATTTTAGTTCACAACCACCAAATAGATTTTATACATATTAGGTACATCACTCAGCATTAACTTACCAATGAAATTAATTGAAGTTATCATTTAACCCACATTAACATGAATGTTCATTTCTCTACATTCATATCTTTTGGAACAATGACATTGATGTTCTGAATGCTACTTTCAGCATAAAAATGGTGATAGAAAGATACAACAAAATGAAGGACGAGAGCAACCACCAGCTATCATCTGCTGCTTCTGAACTTAAGGTAAACATATTTTATCACGTGATTAGCCTGCATCGACACTGAAGCTTGACCTGCATTTATCAGCCCAAAGTCGGTGGCGTTTTCACATATAACAATAGAAAAACTTAATGGAAATAGCATGCACATGGTGGTATTTGCAACTATTTGATTTCACATACACAATCAGTGTAGCACATACAGGTATGATTCAGGTGTTTAAGAATATTTCCTACACAAGTAGCATAATGTTGAATTCTCGCGCCTCATTTGCTGCATATATTTAGGGTTTCAGCATATTTTTGTCTTACAGGTGTGAAGAAAAAGTATTTTAGCAGTAATGTATATGTTGTTACTTTACAATACGTTCAGTAATTTCCTGTATGAACTTTTGTTGCAAATATGGAACTTGTATCCCTTACATTTCAGCATTCAGAACCAGTGAAGCTGAAAATGCAGTATGCTGTCAATTCGCAAACTTTCGAGAATGTCACCAGGAGATGCCAATATAGATATGGAATTAGATGATATCAGCGACTTAGAAGGGACATGCTTGGCTCATTTATAGAAGTTGGATGGCTCCAAGAGAGGCTCGTTGAGATTTATGAAGAAAAGAAAGAAATCCCTATGCTCAGGCCATCATCTGAATTGAGAAAGACTCGAACTGAACAGATGTTCAAGATTCAGAGTACAAAAGAACTATTGGAAGAGTACAAGAGATATATGTTTATTAGACAAGAAGAACTTCGCAATTTCAAGGAAAAGTACTTCATGGATGACAGTGAACTTTCTATTGTTGTGGCGGATGCTACTATAGCAGGAAATTGGATTGGCGAGTACAAGGAGAAGTTGAGGTGCATTATGGATTTAGGCTACTTACATTGTGGACTAGTTTAGCGTAAGCATGATTGTTTGGATAAACTATGATGAATGAAGCACGACTTGACTTTTGTTTTGATTATTAGAGTACTTAGACAAACAAGAAAATTGGTGTTTGTAGATGTTTTTGTAAGCAACTATACAATTATATCAATTAAATTATTGTCTATCGTATATGCTAATTTCACAAGTTAATATTGTTTATTTTGTTTTTAAAA

mRNA sequence

ATGAGTCCTTGGGTGATAAAACCAGACCTTGATTTCTCTCTCTTTCAATCCCTAATTTATAAACAAATCAAGGGAAGATTCAATGAATGCATAAAAATGGTGATAGAAAGATACAACAAAATGAAGGACGAGAGCAACCACCAGCTATCATCTGCTGCTTCTGAACTTAAGCATTCAGAACCAGTGAAGCTGAAAATGCAGTATGCTGTCAATTCGCAAACTTTCGAGAATGTCACCAGGAGATGCCAATATAGATATGGAATTAGATGATATCAGCGACTTAGAAGGGACATGCTTGGCTCATTTATAGAAGTTGGATGGCTCCAAGAGAGGCTCGTTGAGATTTATGAAGAAAAGAAAGAAATCCCTATGCTCAGGCCATCATCTGAATTGAGAAAGACTCGAACTGAACAGATGTTCAAGATTCAGAGTACAAAAGAACTATTGGAAGAGTACAAGAGATATATGTTTATTAGACAAGAAGAACTTCGCAATTTCAAGGAAAAGTACTTCATGGATGACAGTGAACTTTCTATTGTTGTGGCGGATGCTACTATAGCAGGAAATTGGATTGGCGAGTACAAGGAGAAGTTGAGGTGCATTATGGATTTAGGCTACTTACATTGTGGACTAGTTTAGCGTAAGCATGATTGTTTGGATAAACTATGATGAATGAAGCACGACTTGACTTTTGTTTTGATTATTAGAGTACTTAGACAAACAAGAAAATTGGTGTTTGTAGATGTTTTTGTAAGCAACTATACAATTATATCAATTAAATTATTGTCTATCGTATATGCTAATTTCACAAGTTAATATTGTTTATTTTGTTTTTAAAA

Coding sequence (CDS)

ATGAGTCCTTGGGTGATAAAACCAGACCTTGATTTCTCTCTCTTTCAATCCCTAATTTATAAACAAATCAAGGGAAGATTCAATGAATGCATAAAAATGGTGATAGAAAGATACAACAAAATGAAGGACGAGAGCAACCACCAGCTATCATCTGCTGCTTCTGAACTTAAGCATTCAGAACCAGTGAAGCTGAAAATGCAGTATGCTGTCAATTCGCAAACTTTCGAGAATGTCACCAGGAGATGCCAATATAGATATGGAATTAGATGA

Protein sequence

MSPWVIKPDLDFSLFQSLIYKQIKGRFNECIKMVIERYNKMKDESNHQLSSAASELKHSEPVKLKMQYAVNSQTFENVTRRCQYRYGIR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo19703.1Spo19703.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo19703.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19703.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19703.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19703.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006893 Golgi to plasma membrane transport
biological_process GO:0006570 tyrosine metabolic process
biological_process GO:0098507 polynucleotide 5' dephosphorylation
biological_process GO:0035335 peptidyl-tyrosine dephosphorylation
biological_process GO:0006260 DNA replication
biological_process GO:0006266 DNA ligation
biological_process GO:0006370 7-methylguanosine mRNA capping
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0055085 transmembrane transport
biological_process GO:0006680 glucosylceramide catabolic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0048868 pollen tube development
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0006687 glycosphingolipid metabolic process
biological_process GO:0030968 endoplasmic reticulum unfolded protein response
biological_process GO:0051017 actin filament bundle assembly
biological_process GO:0016311 dephosphorylation
biological_process GO:0040029 regulation of gene expression, epigenetic
biological_process GO:0006560 proline metabolic process
biological_process GO:0006420 arginyl-tRNA aminoacylation
biological_process GO:0006525 arginine metabolic process
biological_process GO:0006812 cation transport
biological_process GO:0006397 mRNA processing
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0019219 regulation of nucleobase-containing compound metabolic process
biological_process GO:2000112 regulation of cellular macromolecule biosynthetic process
biological_process GO:0001510 RNA methylation
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0007275 multicellular organism development
biological_process GO:0031047 gene silencing by RNA
biological_process GO:0006259 DNA metabolic process
biological_process GO:0048856 anatomical structure development
biological_process GO:0009308 amine metabolic process
biological_process GO:0006396 RNA processing
biological_process GO:0006651 diacylglycerol biosynthetic process
biological_process GO:0006075 (1->3)-beta-D-glucan biosynthetic process
biological_process GO:0009644 response to high light intensity
biological_process GO:0005982 starch metabolic process
biological_process GO:0006457 protein folding
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0030261 chromosome condensation
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0071555 cell wall organization
biological_process GO:0006310 DNA recombination
biological_process GO:0006281 DNA repair
biological_process GO:0043631 RNA polyadenylation
biological_process GO:0051321 meiotic cell cycle
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0007064 mitotic sister chromatid cohesion
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0009408 response to heat
biological_process GO:0051301 cell division
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0030880 RNA polymerase complex
cellular_component GO:0005730 nucleolus
cellular_component GO:0005829 cytosol
cellular_component GO:0030176 integral component of endoplasmic reticulum membrane
cellular_component GO:0000785 chromatin
cellular_component GO:0008278 cohesin complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0000145 exocyst
cellular_component GO:0005634 nucleus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005576 extracellular region
cellular_component GO:0009507 chloroplast
cellular_component GO:0005622 intracellular
cellular_component GO:0044464 cell part
cellular_component GO:0016020 membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0032040 small-subunit processome
cellular_component GO:0005886 plasma membrane
cellular_component GO:0000148 1,3-beta-D-glucan synthase complex
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0044444 cytoplasmic part
molecular_function GO:0005525 GTP binding
molecular_function GO:0005488 binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0043167 ion binding
molecular_function GO:0008233 peptidase activity
molecular_function GO:0048038 quinone binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004650 polygalacturonase activity
molecular_function GO:0047874 dolichyldiphosphatase activity
molecular_function GO:0008195 phosphatidate phosphatase activity
molecular_function GO:0043531 ADP binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0010181 FMN binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0004652 polynucleotide adenylyltransferase activity
molecular_function GO:0004348 glucosylceramidase activity
molecular_function GO:0003843 1,3-beta-D-glucan synthase activity
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0008171 O-methyltransferase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0003910 DNA ligase (ATP) activity
molecular_function GO:0004484 mRNA guanylyltransferase activity
molecular_function GO:0004651 polynucleotide 5'-phosphatase activity
molecular_function GO:0004725 protein tyrosine phosphatase activity
molecular_function GO:0008138 protein tyrosine/serine/threonine phosphatase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0022857 transmembrane transporter activity
molecular_function GO:0019905 syntaxin binding
molecular_function GO:0003779 actin binding
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0004814 arginine-tRNA ligase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo049850.75Barchart | Table
Spo043850.74Barchart | Table
Spo172250.73Barchart | Table
Spo258790.72Barchart | Table
Spo013130.72Barchart | Table
Spo268330.72Barchart | Table
Spo236110.71Barchart | Table
Spo265640.70Barchart | Table
Spo117440.70Barchart | Table
Spo186030.70Barchart | Table
Spo110690.70Barchart | Table
Spo047030.69Barchart | Table
Spo022540.69Barchart | Table
Spo166800.69Barchart | Table
Spo006940.68Barchart | Table
Spo018410.68Barchart | Table
Spo029840.68Barchart | Table
Spo031850.68Barchart | Table
Spo044480.68Barchart | Table
Spo051270.68Barchart | Table
Spo073190.68Barchart | Table
Spo106610.68Barchart | Table
Spo107930.68Barchart | Table
Spo109660.68Barchart | Table
Spo195180.68Barchart | Table
Spo235070.68Barchart | Table
Spo264910.68Barchart | Table
Spo112960.67Barchart | Table
Spo121620.67Barchart | Table
Spo142750.67Barchart | Table
Spo107620.67Barchart | Table
Spo247130.67Barchart | Table
Spo148260.67Barchart | Table
Spo185490.67Barchart | Table
Spo060410.67Barchart | Table
Spo074260.67Barchart | Table
Spo202420.67Barchart | Table
Spo209000.67Barchart | Table
Spo087400.67Barchart | Table
Spo223860.67Barchart | Table
Spo109470.67Barchart | Table
Spo228940.67Barchart | Table
Spo160820.67Barchart | Table
Spo057650.67Barchart | Table
Spo067480.67Barchart | Table
Spo252340.67Barchart | Table
Spo107840.66Barchart | Table
Spo054870.66Barchart | Table
Spo074410.66Barchart | Table
Spo113840.66Barchart | Table
Spo116800.66Barchart | Table
Spo119190.66Barchart | Table
Spo121550.66Barchart | Table
Spo149190.66Barchart | Table
Spo150890.66Barchart | Table
Spo171230.66Barchart | Table
Spo172200.66Barchart | Table
Spo060950.66Barchart | Table
Spo172350.66Barchart | Table
Spo177790.66Barchart | Table
Spo028180.66Barchart | Table
Spo227500.66Barchart | Table
Spo233550.66Barchart | Table
Spo242410.66Barchart | Table
Spo092190.66Barchart | Table
Spo085410.65Barchart | Table
Spo216500.65Barchart | Table
Spo119930.65Barchart | Table
Spo177550.65Barchart | Table
Spo030020.65Barchart | Table
Spo176840.65Barchart | Table