Spo19710 (gene)

Overview
NameSpo19710
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_00409 : 221859 .. 224816 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAAGATGAAAAACAACCATAAATTGTATTTGATTGTTGTAACATAAATTCTTGTGTATCAAGAGTTCAACACCATCAACGCTATAATTACAAATTAACACCACCAAAATAAAAATAAAAATTAAATATATAAAAAAAATATGGTATGACTAATTAATCAAATTAAATTATAATTCTCATCAATTTGGTACTATCAATTTATTTAAAATGCAAATAATTTGATTCCTTAATAATTGATTTTTTCTCGGTAACCTCCGACATCTTTGATTTCATGTTCTACAAAGGTATTGGACGGATTTAAATCAATCAAATCTGCGAAAGTTGTCGAGAAAAAATCAATTATTAAGGAATCAAGTTATTTTCATTTTGAATATAAATTGATAGTACCAAATTGATGAGAATTATGAGATTGAATTTAATTTGATTAATTAGTGATACCATTTTTTTTAATTTTTTTATATTTTATTTTTATTTTTATTTTATCAATCCATCCAATACCGTTGTAGAACATGAAATCAAAGATGTTGTTATCCAAAGGATGATGACGACCATAATTTTTGAACAAGTAATTCCCAGAATCGAAACTTGGGTTCTGGTTGTTTTCACGAAGCATGGAACAAAGAGAATATATGGGGAAGGGTCTCGATTGGTAGGGAAGCGATGTTAAGGGTGGTGTTGGTCGACGTGTAGAACTGTAGAAGAAGGTTGGAGGACGGTGGTGGTCCTTAGTAGAGACATGGTGCTTTCTTGGGGGTGTAGTGTTGTGGAGGAGAGAGAACCTAAATAACTACTAGCTGAACAAAGGAAATGAAGAAGAGGAGGAAATAGGGAAGAAGGAAAATTGGGATAAGTTGAAAATTTTATTTTAAAAAAAAAACTAACAACGAAAGGTTGCATGACGCGCCATGTGGGATAGGTTACTTGCCGCACCAGTTCTTTTATCAGTTGGGTGTCATAAAAGTTAATGGGGGTGCAAAGATTGAATTATTAGATAATGATGGAAATGTTGGATTATTACTGGGAGATCGTCAAAATGTTGGATTATTTAATGTAATTTTTCCTAAAAAATTTTATGTTAAAACACTATTTAAGGTCGGATTATAAACATTAACTCGAAATTTCGGACTTGAGGTGCATCTCAGGAGAAAATGGGTAAATAAATGTCACGTGAGAATGTAAGAAGCATATGGTACCCGTCAAAAAAAAAAAGAAAAGGAAATGCATATGGTAAAGTCAATCCCAAAATTTTATGTCAACATTCATAAATCAGGAAAATGTAATATCCTGTATCTTAAAATATAAAATTGATATAGATAGTCAATTCACTAGTAGAAAAATCGACATGTGCTTCCCTTCAAGTGCGGGCCATTTTGTAAATTGGCAGCACTTAAGAGCACAAAAAAAAAAAAACAATATATATTTACAAGTGCGGGCTCATCTTAGAAATTTGGCAGCACTTGACTTCNAAAAAAAAAAAACAATATATATTTACAAGTGCGGGCTCATCTTAGAAATTTGGCAGCACTTGACTTCAAGTGCGGGCTCGTTTAAACGACCCGCACAAAATATTTTCTAAAAATAATTCCCAAATTTTTTTCATTTCCCGCTTCTCTTCTCCTTCCTCTTCTCTGGTTTCCCTAAAACCTACTCTCACCTCTGGTATTTCATTTCCGATATCACCTTCCCCTCTCTGATTTCTCTTCTCTTCCCCTCTCCGGTTCTCCGGTTCTCTGGGCAGGAAATCAATACTAACAGCACACACCGCACTCCCCACCGCCGCGTCGCCGTTGCTGCTCCCCATCGCCGCGTCGCCGTTGCTTCTCCCCACCAGCGTCGCCGTTACTTCTCTCCACCGCCGCGTCGCCGCTGCTTTTCCCCCACTGCAGAATACGTCCTCTTTCTTCCGCCGCCGCAACACAAAGGCGTCGCTCCTCCTTATCTCATATAGGTTTGTAATTTAAATTTAATTATTTGTTTCTTATAATAAGCTTGTTACTGTAATGACAAATTTATAAGGAAATGACGAATTAATTATAACTGGAAATCTGTCTAAGCTTAGCTTGTTACGAATCCGTTTAAGCTTTCTTTGGTTTACCTGTTTCTGAGCGGATGCAATTAAGGGTATTGGGATTACACAAATATGACTCAGGTTTATCACTTTTACCATTTTTTTTATTTGCTCTTTCTAAATATTTTTATTATTGTTTTTGTTTGTCCATACTCGAAGAACAGTGTTGTAATTGCACAAATAATCAAATATTAGTTTGTAAAGTCGTGTTTTAGTTGTTTTTGCAAGGGTGATTGTAGTGGGGTGCTGAATGTAGTATGTAGTCGTCAGGGGAGCCGTGTTTTAGCTGTTTTTGCAATGGTGAGTTGGTGATTGTAGTGGGGTGCGGAATGTAGTAGTCAGGGAAGCTATGTTTTAGTTGCTTTTGCAATGGTGCCTGTAGTTGGGTGCGGAATGTAGTAGTCAGGGAAGGCGTGTGTTGTGCTGCCGTTGCATATGTGCTGCTAAGAGTGATCACCCTTGTCCAGTTAGTTAGTTTCTTATTTGGATCTTGATGACTTGCATGGTGATGTAGTAGTTTGTACTTCCAGGCTCTAGCTAGTCTGTTGAGATCTGGAAACAATCTAAAGCAAATCATCTAACTCTGGCAAGAGTGCCAACCTTTTATTTTATTTATTTTATTTTCTGTTTAAAATCTTTAGCTAGTTGGTTGGAAATGTGTGTTAAATGTTAATATATCAGTAGTTCAATACTTCAATAAATTATTCTTATACTTCTCTACAGTTGATGTGTGGACCTTTGTGGCTTTGTATCTTCAGCTACTTGCTTTGTTGCCTTGTATACCCGTAGAAACTTTCTTAAATGGTCAAAATCAAGAAGCATCATTTTTCTTGAGAGGTTTATTTATTGTTTCTTCAGCAATCTTGAGGCTAAGTGTACTGATTGA

mRNA sequence

ATGAAAAAGATGAAAAACAACCATAAATTGAAATCAATACTAACAGCACACACCGCACTCCCCACCGCCGCGTCGCCGTTGCTGCTCCCCATCGCCGCGTCGCCGTTGCTTCTCCCCACCAGCGTCGCCGTTACTTCTCTCCACCGCCGCGTCGCCGCTGCTTTTCCCCCACTGCAGAATACGTCCTCTTTCTTCCGCCGCCGCAACACAAAGGCGTCGCTCCTCCTTATCTCATATAGCAATCTTGAGGCTAAGTGTACTGATTGA

Coding sequence (CDS)

ATGAAAAAGATGAAAAACAACCATAAATTGAAATCAATACTAACAGCACACACCGCACTCCCCACCGCCGCGTCGCCGTTGCTGCTCCCCATCGCCGCGTCGCCGTTGCTTCTCCCCACCAGCGTCGCCGTTACTTCTCTCCACCGCCGCGTCGCCGCTGCTTTTCCCCCACTGCAGAATACGTCCTCTTTCTTCCGCCGCCGCAACACAAAGGCGTCGCTCCTCCTTATCTCATATAGCAATCTTGAGGCTAAGTGTACTGATTGA

Protein sequence

MKKMKNNHKLKSILTAHTALPTAASPLLLPIAASPLLLPTSVAVTSLHRRVAAAFPPLQNTSSFFRRRNTKASLLLISYSNLEAKCTD
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo19710.1Spo19710.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo19710.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19710.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19710.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19710.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030048 actin filament-based movement
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0006412 translation
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0001510 RNA methylation
biological_process GO:0042545 cell wall modification
biological_process GO:0009860 pollen tube growth
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005618 cell wall
cellular_component GO:0009507 chloroplast
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005730 nucleolus
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005774 vacuolar membrane
molecular_function GO:0015238 drug transmembrane transporter activity
molecular_function GO:0015297 antiporter activity
molecular_function GO:0003735 structural constituent of ribosome
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo170190.74Barchart | Table
Spo153930.67Barchart | Table
Spo063940.65Barchart | Table
Spo079200.65Barchart | Table