Spo19730 (gene)

Overview
NameSpo19730
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionHistone H2A
LocationSpoScf_00409 : 372406 .. 373916 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATATCCATGCATCAAATCAACGCCACCCGTCGATCTCACCTTCAATCCAACGGCACACGTCATCGATCCGTGACATCTCCTTTGATTGGTCAAGAATTGTTCACATACCCTTTAAATAGTCATCGCCACTTTCTACCTGATCCCATTCTTCACTCTCTTCCTTTCTCTCTCCTGAACTGTCGTGCATAAACTTCTCCCCTCAACCTCTCGCACTAAACGCCAACAACCACCCCCTCACTCTCTCTCATCGACGTCCATGGCTGGAAGGGGAAAGAACATCGGCGCCGGTGCCGCCGTAAAGAAAGGTGTTTCTCGCAGTAGCAAGGCTGGCCTCCAGTTTCCCGTCGGAAGAATCGCTCGTTTTCTCAAGGCCGGTAAGTACGCCGAGCGTGTTGGTGCTGGTGCTCCTGTCTACCTCGCCGCCGTCCTTGAATATCTCGCAGCTGAGGTATTTCCTTTTTCTTTTTTCCCCATACATCTATCTTTGTTTTTGATTTAATTTCGTTTTGAAATTCTTGTTCATTGAATCTATTTCGTGCCGATTCGTTAGATTTTTGCTATTAATTTCCTGATTTCGATTTTACAGTTCAAATCCGAGCTTATCTGATTATTTTCTTTCCATTTTCTTTGGTTTCTTGCCTTGATTTTTCGATTTGCGGCTTCTCCGTACTTTAGTTATTTTAACCTAATTTCGCCACTTCAAAATTCCTCATGGACTCCGATTTGATTAACAATTACTGTTTTCCAAACTGTTTAATCCGTGATTTCAGTGTTTCAAATTGAATTTTCATCTCATAAATGGTTAATTTCCCCCTAACTTTAATTGACAATTCAATTTCCCCTGATTATTCTCTCGTTTTCTAACAAACGCTTCAGATTTCTTTCTGTTTTTAACCATTTGCCGATGATTCTTTTCCACTTCTTTCGCTAACTGTTCCTTCCATCAATCAAATGAAGGTTCTGGAGTTGGCCGGAAACGCAGCAAGGGACAACAAGAAGACCCGAATAGTGCCCCGCCACATCCAATTGGCAGTCAGAAACGATGAAGAGCTCAGCAGGCTTCTCGGCGATGTGACAATCGCAGCCGGAGGAGTAATGCCAAACATTCACAACCTTCTCCTCCCTAACAAGCCCACCAAGAAGCCTACCGCTGAAGAAGATTAAACTGAAATCATCTTTGATTAGAAGGTCCTTCTCTTTGATAATGTAGAGATGAACGTACAGTCAGATAGTTTTATTTTCACATATGTCATAGGATTTGTTTTATTTCCAAGTTTCGGCTGGTTTAGTTCCCTCTGATTTTTCTGTAGGTTTAGAAATTAGTAGAATGTAGTTCGTCCAATCATCTATGAAAAAAAAACAAATTTGATACTCCTATCGTTTATGGAATCGAGTAAAAGCTTGAAATTATGTTTGATTTGCTGTTTTATGCCAATCTATATTGATTATGGATTTTTCCTGGTTTTGTTTGGTTTCTATGGTTAGTGTAAATTTTGTTGATTGAATGAGC

mRNA sequence

CATATCCATGCATCAAATCAACGCCACCCGTCGATCTCACCTTCAATCCAACGGCACACGTCATCGATCCGTGACATCTCCTTTGATTGGTCAAGAATTGTTCACATACCCTTTAAATAGTCATCGCCACTTTCTACCTGATCCCATTCTTCACTCTCTTCCTTTCTCTCTCCTGAACTGTCGTGCATAAACTTCTCCCCTCAACCTCTCGCACTAAACGCCAACAACCACCCCCTCACTCTCTCTCATCGACGTCCATGGCTGGAAGGGGAAAGAACATCGGCGCCGGTGCCGCCGTAAAGAAAGGTGTTTCTCGCAGTAGCAAGGCTGGCCTCCAGTTTCCCGTCGGAAGAATCGCTCGTTTTCTCAAGGCCGGTAAGTACGCCGAGCGTGTTGGTGCTGGTGCTCCTGTCTACCTCGCCGCCGTCCTTGAATATCTCGCAGCTGAGGTTCTGGAGTTGGCCGGAAACGCAGCAAGGGACAACAAGAAGACCCGAATAGTGCCCCGCCACATCCAATTGGCAGTCAGAAACGATGAAGAGCTCAGCAGGCTTCTCGGCGATGTGACAATCGCAGCCGGAGGAGTAATGCCAAACATTCACAACCTTCTCCTCCCTAACAAGCCCACCAAGAAGCCTACCGCTGAAGAAGATTAAACTGAAATCATCTTTGATTAGAAGGTCCTTCTCTTTGATAATGTAGAGATGAACGTACAGTCAGATAGTTTTATTTTCACATATGTCATAGGATTTGTTTTATTTCCAAGTTTCGGCTGGTTTAGTTCCCTCTGATTTTTCTGTAGGTTTAGAAATTAGTAGAATGTAGTTCGTCCAATCATCTATGAAAAAAAAACAAATTTGATACTCCTATCGTTTATGGAATCGAGTAAAAGCTTGAAATTATGTTTGATTTGCTGTTTTATGCCAATCTATATTGATTATGGATTTTTCCTGGTTTTGTTTGGTTTCTATGGTTAGTGTAAATTTTGTTGATTGAATGAGC

Coding sequence (CDS)

ATGGCTGGAAGGGGAAAGAACATCGGCGCCGGTGCCGCCGTAAAGAAAGGTGTTTCTCGCAGTAGCAAGGCTGGCCTCCAGTTTCCCGTCGGAAGAATCGCTCGTTTTCTCAAGGCCGGTAAGTACGCCGAGCGTGTTGGTGCTGGTGCTCCTGTCTACCTCGCCGCCGTCCTTGAATATCTCGCAGCTGAGGTTCTGGAGTTGGCCGGAAACGCAGCAAGGGACAACAAGAAGACCCGAATAGTGCCCCGCCACATCCAATTGGCAGTCAGAAACGATGAAGAGCTCAGCAGGCTTCTCGGCGATGTGACAATCGCAGCCGGAGGAGTAATGCCAAACATTCACAACCTTCTCCTCCCTAACAAGCCCACCAAGAAGCCTACCGCTGAAGAAGATTAA

Protein sequence

MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLPNKPTKKPTAEED
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo19730.1Spo19730.1mRNA


Homology
[Close]
BLAST of Spo19730.1 vs. NCBI nr
Match: gi|902209654|gb|KNA16249.1| (hypothetical protein SOVF_090840 [Spinacia oleracea])

HSP 1 Score: 251.9 bits (642), Expect = 6.100e-64
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1 

		  

Query: 1   MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60
           MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY
Sbjct: 1   MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60

Query: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120
           LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP
Sbjct: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120

Query: 121 NKPTKKPTAEED 133
           NKPTKKPTAEED
Sbjct: 121 NKPTKKPTAEED 132
[Close]
BLAST of Spo19730.1 vs. NCBI nr
Match: gi|731351232|ref|XP_010686931.1| (PREDICTED: histone H2A.6-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 228.8 bits (582), Expect = 5.600e-57
Identity = 121/132 (91.67%), Postives = 123/132 (93.18%), Query Frame = 1 

		  

Query: 1   MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60
           MAGRGKNIGAGA  KK VSRSSKAGLQFPVGRIARFLK+GKYAERVGAGAPVYLAAVLEY
Sbjct: 1   MAGRGKNIGAGATAKKAVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLAAVLEY 60

Query: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120
           LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP
Sbjct: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120

Query: 121 NKPTKKPTAEED 133
           NK   K   EE+
Sbjct: 121 NKTGAKAAREEE 132
[Close]
BLAST of Spo19730.1 vs. NCBI nr
Match: gi|923742116|ref|XP_013671585.1| (PREDICTED: probable histone H2A.3 [Brassica napus])

HSP 1 Score: 220.3 bits (560), Expect = 2.000e-54
Identity = 120/134 (89.55%), Postives = 124/134 (92.54%), Query Frame = 1 

		  

Query: 1   MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60
           MAGRGK +G+GAA KK  SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY
Sbjct: 1   MAGRGKQLGSGAA-KKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60

Query: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120
           LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLGDVTIA GGVMPNIHNLLLP
Sbjct: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 120

Query: 121 NKP--TKKPTAEED 133
           NK   + KPT EED
Sbjct: 121 NKKAGSSKPTDEED 133
[Close]
BLAST of Spo19730.1 vs. NCBI nr
Match: gi|288187167|gb|ADC42106.1| (H2A [Cloning vector pENTR/Zeo-H2A])

HSP 1 Score: 217.6 bits (553), Expect = 1.300e-53
Identity = 118/133 (88.72%), Postives = 123/133 (92.48%), Query Frame = 1 

		  

Query: 1   MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60
           MAGRGK +G+GAA KK  SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY
Sbjct: 16  MAGRGKQLGSGAA-KKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 75

Query: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120
           LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLGDVTIA GGVMPNIHNLLLP
Sbjct: 76  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 135

Query: 121 NKP-TKKPTAEED 133
            K  + KPT E+D
Sbjct: 136 KKAGSSKPTEEDD 147
[Close]
BLAST of Spo19730.1 vs. NCBI nr
Match: gi|698497818|ref|XP_009794859.1| (PREDICTED: histone H2A.6 [Nicotiana sylvestris])

HSP 1 Score: 217.6 bits (553), Expect = 1.300e-53
Identity = 118/134 (88.06%), Postives = 124/134 (92.54%), Query Frame = 1 

		  

Query: 1   MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60
           MAGRGK +G+GAA KK  SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY
Sbjct: 1   MAGRGKTLGSGAA-KKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60

Query: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120
           LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLGDVTIA GGVMPNIHNLLLP
Sbjct: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 120

Query: 121 NK--PTKKPTAEED 133
            K   + KP+A+ED
Sbjct: 121 KKSGASSKPSADED 133
[Close]
BLAST of Spo19730.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RB60_SPIOL (Histone H2A OS=Spinacia oleracea GN=SOVF_090840 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 4.300e-64
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1 

		  

Query: 1   MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60
           MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY
Sbjct: 1   MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60

Query: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120
           LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP
Sbjct: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120

Query: 121 NKPTKKPTAEED 133
           NKPTKKPTAEED
Sbjct: 121 NKPTKKPTAEED 132
[Close]
BLAST of Spo19730.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BVJ4_BETVU (Histone H2A OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g186650 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 3.900e-57
Identity = 121/132 (91.67%), Postives = 123/132 (93.18%), Query Frame = 1 

		  

Query: 1   MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60
           MAGRGKNIGAGA  KK VSRSSKAGLQFPVGRIARFLK+GKYAERVGAGAPVYLAAVLEY
Sbjct: 1   MAGRGKNIGAGATAKKAVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLAAVLEY 60

Query: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120
           LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP
Sbjct: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120

Query: 121 NKPTKKPTAEED 133
           NK   K   EE+
Sbjct: 121 NKTGAKAAREEE 132
[Close]
BLAST of Spo19730.1 vs. UniProtKB/TrEMBL
Match: A0A078GS30_BRANA (Histone H2A OS=Brassica napus GN=BnaC01g19370D PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.400e-54
Identity = 120/134 (89.55%), Postives = 124/134 (92.54%), Query Frame = 1 

		  

Query: 1   MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60
           MAGRGK +G+GAA KK  SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY
Sbjct: 1   MAGRGKQLGSGAA-KKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60

Query: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120
           LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLGDVTIA GGVMPNIHNLLLP
Sbjct: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 120

Query: 121 NKP--TKKPTAEED 133
           NK   + KPT EED
Sbjct: 121 NKKAGSSKPTDEED 133
[Close]
BLAST of Spo19730.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BCD2_BETVU (Histone H2A OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g092250 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.200e-53
Identity = 116/132 (87.88%), Postives = 121/132 (91.67%), Query Frame = 1 

		  

Query: 1   MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60
           MAGRGK +G+G A KK  SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY
Sbjct: 1   MAGRGKTLGSGTA-KKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60

Query: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120
           LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLGDVTIA GGVMPNIHNLLLP
Sbjct: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 120

Query: 121 NKPTKKPTAEED 133
            K   K TA++D
Sbjct: 121 KKAGSKATADDD 131
[Close]
BLAST of Spo19730.1 vs. UniProtKB/TrEMBL
Match: K4DB65_SOLLC (Histone H2A OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.200e-53
Identity = 118/133 (88.72%), Postives = 124/133 (93.23%), Query Frame = 1 

		  

Query: 1   MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60
           MAGRGK +G+GAA KK  SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY
Sbjct: 1   MAGRGKTLGSGAA-KKAQSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60

Query: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120
           LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLGDVTIA GGVMPNIHNLLLP
Sbjct: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 120

Query: 121 NKP-TKKPTAEED 133
            K  + KP+A+ED
Sbjct: 121 KKAGSSKPSADED 132
[Close]
BLAST of Spo19730.1 vs. ExPASy Swiss-Prot
Match: H2A3_ARATH (Probable histone H2A.3 OS=Arabidopsis thaliana GN=At4g27230 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.000e-55
Identity = 117/132 (88.64%), Postives = 122/132 (92.42%), Query Frame = 1 

		  

Query: 1   MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60
           MAGRGK +G+GAA KK  SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY
Sbjct: 1   MAGRGKQLGSGAA-KKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60

Query: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120
           LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLGDVTIA GGVMPNIHNLLLP
Sbjct: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 120

Query: 121 NKP-TKKPTAEE 132
            K  + KPT E+
Sbjct: 121 KKAGSSKPTEED 131
[Close]
BLAST of Spo19730.1 vs. ExPASy Swiss-Prot
Match: H2A1_ARATH (Probable histone H2A.1 OS=Arabidopsis thaliana GN=At1g51060 PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.500e-54
Identity = 115/133 (86.47%), Postives = 122/133 (91.73%), Query Frame = 1 

		  

Query: 1   MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60
           MAGRGK +G+G+A KK  +RSSKAGLQFPVGRIARFLK GKYAERVGAGAPVYLAAVLEY
Sbjct: 1   MAGRGKTLGSGSA-KKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEY 60

Query: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120
           LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLGDVTIA GGVMPNIHNLLLP
Sbjct: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 120

Query: 121 NKP-TKKPTAEED 133
            K    KP+AE+D
Sbjct: 121 KKTGASKPSAEDD 132
[Close]
BLAST of Spo19730.1 vs. ExPASy Swiss-Prot
Match: H2A7_WHEAT (Protein H2A.7 OS=Triticum aestivum GN=H2A-4 PE=2 SV=3)

HSP 1 Score: 212.2 bits (539), Expect = 3.400e-54
Identity = 117/134 (87.31%), Postives = 123/134 (91.79%), Query Frame = 1 

		  

Query: 1   MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60
           MAGRGK IG+GAA KK +SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY
Sbjct: 1   MAGRGKAIGSGAA-KKAISRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60

Query: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120
           LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLG VTIA+GGVMPNIHNLLLP
Sbjct: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGMVTIASGGVMPNIHNLLLP 120

Query: 121 NKP--TKKPTAEED 133
            K   +K   A++D
Sbjct: 121 KKAGGSKAVAADDD 133
[Close]
BLAST of Spo19730.1 vs. ExPASy Swiss-Prot
Match: H2A2_ORYSI (Probable histone H2A.2 OS=Oryza sativa subsp. indica GN=OsI_025469 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 5.700e-54
Identity = 114/122 (93.44%), Postives = 117/122 (95.90%), Query Frame = 1 

		  

Query: 1   MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60
           MAGRGK IG+GAA KK +SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY
Sbjct: 1   MAGRGKAIGSGAA-KKAMSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60

Query: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120
           LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLG VTIA+GGVMPNIHNLLLP
Sbjct: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLP 120

Query: 121 NK 123
            K
Sbjct: 121 KK 121
[Close]
BLAST of Spo19730.1 vs. ExPASy Swiss-Prot
Match: H2A2_ORYSJ (Probable histone H2A.2 OS=Oryza sativa subsp. japonica GN=Os07g0545400 PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 5.700e-54
Identity = 114/122 (93.44%), Postives = 117/122 (95.90%), Query Frame = 1 

		  

Query: 1   MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60
           MAGRGK IG+GAA KK +SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY
Sbjct: 1   MAGRGKAIGSGAA-KKAMSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60

Query: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120
           LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLG VTIA+GGVMPNIHNLLLP
Sbjct: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLP 120

Query: 121 NK 123
            K
Sbjct: 121 KK 121
[Close]
BLAST of Spo19730.1 vs. TAIR (Arabidopsis)
Match: AT4G27230.1 (histone H2A 2)

HSP 1 Score: 215.3 bits (547), Expect = 2.200e-56
Identity = 117/132 (88.64%), Postives = 122/132 (92.42%), Query Frame = 1 

		  

Query: 1   MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60
           MAGRGK +G+GAA KK  SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY
Sbjct: 1   MAGRGKQLGSGAA-KKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60

Query: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120
           LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLGDVTIA GGVMPNIHNLLLP
Sbjct: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 120

Query: 121 NKP-TKKPTAEE 132
            K  + KPT E+
Sbjct: 121 KKAGSSKPTEED 131
[Close]
BLAST of Spo19730.1 vs. TAIR (Arabidopsis)
Match: AT1G51060.1 (histone H2A 10)

HSP 1 Score: 213.4 bits (542), Expect = 8.500e-56
Identity = 115/133 (86.47%), Postives = 122/133 (91.73%), Query Frame = 1 

		  

Query: 1   MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60
           MAGRGK +G+G+A KK  +RSSKAGLQFPVGRIARFLK GKYAERVGAGAPVYLAAVLEY
Sbjct: 1   MAGRGKTLGSGSA-KKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEY 60

Query: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120
           LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLGDVTIA GGVMPNIHNLLLP
Sbjct: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 120

Query: 121 NKP-TKKPTAEED 133
            K    KP+AE+D
Sbjct: 121 KKTGASKPSAEDD 132
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BLAST of Spo19730.1 vs. TAIR (Arabidopsis)
Match: AT5G54640.1 (Histone superfamily protein)

HSP 1 Score: 209.9 bits (533), Expect = 9.400e-55
Identity = 112/122 (91.80%), Postives = 115/122 (94.26%), Query Frame = 1 

		  

Query: 1   MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60
           MAGRGK +G+G A KK  SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY
Sbjct: 1   MAGRGKTLGSGGA-KKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60

Query: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120
           LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLGDVTIA GGVMPNIHNLLLP
Sbjct: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 120

Query: 121 NK 123
            K
Sbjct: 121 KK 121
[Close]
BLAST of Spo19730.1 vs. TAIR (Arabidopsis)
Match: AT3G20670.1 (histone H2A 13)

HSP 1 Score: 209.5 bits (532), Expect = 1.200e-54
Identity = 114/133 (85.71%), Postives = 120/133 (90.23%), Query Frame = 1 

		  

Query: 1   MAGRGKNIGAGAAVKKGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 60
           MAGRGK +G+G A KK  SRSSKAGLQFPVGRIARFLK GKYA RVGAGAPVYLAAVLEY
Sbjct: 1   MAGRGKTLGSGVA-KKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEY 60

Query: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLLP 120
           LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLGDVTIA GGVMPNIH+LLLP
Sbjct: 61  LAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLP 120

Query: 121 NKP-TKKPTAEED 133
            K    KP+A+ED
Sbjct: 121 KKAGASKPSADED 132
[Close]
BLAST of Spo19730.1 vs. TAIR (Arabidopsis)
Match: AT1G54690.1 (gamma histone variant H2AX)

HSP 1 Score: 188.0 bits (476), Expect = 3.800e-48
Identity = 104/126 (82.54%), Postives = 108/126 (85.71%), Query Frame = 1 

		  

Query: 2   AGRGKNIGAGAAVK--KGVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLE 61
           AG G   G     K  K VSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLE
Sbjct: 5   AGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLE 64

Query: 62  YLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGDVTIAAGGVMPNIHNLLL 121
           YLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELS+LLG VTIA GGV+PNIH  LL
Sbjct: 65  YLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLL 124

Query: 122 PNKPTK 126
           P+K  K
Sbjct: 125 PSKVGK 130
The following BLAST results are available for this feature:
BLAST of Spo19730.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902209654|gb|KNA16249.1|6.1e-64100.hypothetical protein SOVF_0908... [more]
gi|731351232|ref|XP_010686931.1|5.6e-5791.6PREDICTED: histone H2A.6-like ... [more]
gi|923742116|ref|XP_013671585.1|2.0e-5489.5PREDICTED: probable histone H2... [more]
gi|288187167|gb|ADC42106.1|1.3e-5388.7H2A [Cloning vector pENTR/Zeo-... [more]
gi|698497818|ref|XP_009794859.1|1.3e-5388.0PREDICTED: histone H2A.6 [Nico... [more]
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BLAST of Spo19730.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RB60_SPIOL4.3e-64100.Histone H2A OS=Spinacia olerac... [more]
A0A0J8BVJ4_BETVU3.9e-5791.6Histone H2A OS=Beta vulgaris s... [more]
A0A078GS30_BRANA1.4e-5489.5Histone H2A OS=Brassica napus ... [more]
A0A0J8BCD2_BETVU1.2e-5387.8Histone H2A OS=Beta vulgaris s... [more]
K4DB65_SOLLC1.2e-5388.7Histone H2A OS=Solanum lycoper... [more]
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BLAST of Spo19730.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
H2A3_ARATH4.0e-5588.6Probable histone H2A.3 OS=Arab... [more]
H2A1_ARATH1.5e-5486.4Probable histone H2A.1 OS=Arab... [more]
H2A7_WHEAT3.4e-5487.3Protein H2A.7 OS=Triticum aest... [more]
H2A2_ORYSI5.7e-5493.4Probable histone H2A.2 OS=Oryz... [more]
H2A2_ORYSJ5.7e-5493.4Probable histone H2A.2 OS=Oryz... [more]
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BLAST of Spo19730.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G27230.12.2e-5688.6histone H2A 2[more]
AT1G51060.18.5e-5686.4histone H2A 10[more]
AT5G54640.19.4e-5591.8Histone superfamily protein[more]
AT3G20670.11.2e-5485.7histone H2A 13[more]
AT1G54690.13.8e-4882.5gamma histone variant H2AX[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 102..120
score: 1.9E-52coord: 45..60
score: 1.9E-52coord: 74..88
score: 1.9E-52coord: 60..73
score: 1.9E-52coord: 16..38
score: 1.9
IPR002119Histone H2ASMARTSM00414h2a4coord: 5..125
score: 7.1
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 15..91
score: 7.9
IPR009072Histone-foldGENE3D1.10.20.10coord: 11..122
score: 5.6
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 12..130
score: 1.2
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 1..122
score: 4.8E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006334 nucleosome assembly
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
RNA-Seq Expression