Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCAAACAATCTCCTAGTAGGAATAATAGACCGAAAGGAATTAAAGTGAAGCACATTTTGCAAATCTGTGTCTTGTTGGCTGTCTGCATTTGGTTACTTTACCAAGTCAAGCATTCTCATGAGAAAAGGAAGGAATTTGAGGCAAAGGATGAGAAGGTTGTGGTGAAGGTTCAAAGTGATAGTGAGATCCAAAGATTTGGGAGAAAAGATATTCCTAGAATCACGGAGATAGATACAGACGGTGAAAAACATGAAGAAGATGAAGATGAAAAAGAAAGCGAAGAGGAAGATAACAAACACGAGGAGGATGAGCCGGAAAGAGAGGATGTCAGAATTATAGAGAGAGAAGAGGAAAGAGGAGGTGGAGATGATGAGATAGATGAACATGAACCAGAAAAGACCGAGACTGAGTCTGAGTCTGACCATGAAGATGAAGCTGTAGATGAAGATAAAGAAAGAGGAGAAAAAGAGGGTGTCACTGAAGAAAGCCATACTGAAAATGAGGATGTTCATGAAGGACTTCCTGAAAAGGAAGAGAATGAGGAGGATACTGGGAAGGAAGAAGGTCACACCGAGTCTGAAGAAAATGATGATGTTGATAACGAAGAACACAGTGAACGAGATGTCGCATCAGATGACCGGGATCATGATGTAGGGAGAACAAACACTCGTGAGGCCCAAGAGGAGCTTTACAGGGCAGATGATGCTTCCAGTGAAGTTACTCATGATGTTCAATCTATTATTCCAGAAACTAAGAACTTGACTTCAGGTCATGGAAATGAAATGTGGGGAAAGGTCAACTTTGGGCAGGATCATGAAAACAAAACCTCTGATGATGCTGAAGAGTTAAACAAACCCGAGGTACAATCAAGAGATGGGGCATCTAATGCAACAATTACTGAATCAAACAACTACGAGGTCAACACGACAAAACCTGATGATAACTCACTTCAGAACTCAACATTGCCTGAAATCACTAGTAATTTAACTGTTGTTGGTAGTGAAAATTCTGCTACTTTGCTTTCTAATGAAACACAGACGGTTCTTGATTCCCATTTATCCCAAAATGGCACAGTTAAAGTGCCTGGGGATGAAGAACCAAACTTGCCAGGCAATGTATTGGAACAGGCTACAGATGACAAGAGCCAGCAGGAAGCTTCAGCAGATGCCAATAAAGATTTGAATGTAAATACCAATATTGGAGAATCCTTAATCTCGCAAAATTCAACATTAGCTTCATCAACTTCTACTACAAATGATAAAGATGCCAAAGAAGCTGCAAAAGATAGCTCTGTAGGTAATGAGAATCAGGGAGATAAATCACAGAGCAGTGAAGAAACTGGCTTGAAAGAAAGTTCTGACGAGGGAACAGATGGTATTCAACATGACCCTATCGATGCTTCTGATACAACGACCCCTATACTGGAAGAAAGAGAGTCTAGGACGGATATGGACACGATGCCTGAAATCAGAAGTGAGGTTCAGAACACAGAGGAAGCTGTGGCTGAGTGA ATGTTCAAACAATCTCCTAGTAGGAATAATAGACCGAAAGGAATTAAAGTGAAGCACATTTTGCAAATCTGTGTCTTGTTGGCTGTCTGCATTTGGTTACTTTACCAAGTCAAGCATTCTCATGAGAAAAGGAAGGAATTTGAGGCAAAGGATGAGAAGGTTGTGGTGAAGGTTCAAAGTGATAGTGAGATCCAAAGATTTGGGAGAAAAGATATTCCTAGAATCACGGAGATAGATACAGACGGTGAAAAACATGAAGAAGATGAAGATGAAAAAGAAAGCGAAGAGGAAGATAACAAACACGAGGAGGATGAGCCGGAAAGAGAGGATGTCAGAATTATAGAGAGAGAAGAGGAAAGAGGAGGTGGAGATGATGAGATAGATGAACATGAACCAGAAAAGACCGAGACTGAGTCTGAGTCTGACCATGAAGATGAAGCTGTAGATGAAGATAAAGAAAGAGGAGAAAAAGAGGGTGTCACTGAAGAAAGCCATACTGAAAATGAGGATGTTCATGAAGGACTTCCTGAAAAGGAAGAGAATGAGGAGGATACTGGGAAGGAAGAAGGTCACACCGAGTCTGAAGAAAATGATGATGTTGATAACGAAGAACACAGTGAACGAGATGTCGCATCAGATGACCGGGATCATGATGTAGGGAGAACAAACACTCGTGAGGCCCAAGAGGAGCTTTACAGGGCAGATGATGCTTCCAGTGAAGTTACTCATGATGTTCAATCTATTATTCCAGAAACTAAGAACTTGACTTCAGGTCATGGAAATGAAATGTGGGGAAAGGTCAACTTTGGGCAGGATCATGAAAACAAAACCTCTGATGATGCTGAAGAGTTAAACAAACCCGAGGTACAATCAAGAGATGGGGCATCTAATGCAACAATTACTGAATCAAACAACTACGAGGTCAACACGACAAAACCTGATGATAACTCACTTCAGAACTCAACATTGCCTGAAATCACTAGTAATTTAACTGTTGTTGGTAGTGAAAATTCTGCTACTTTGCTTTCTAATGAAACACAGACGGTTCTTGATTCCCATTTATCCCAAAATGGCACAGTTAAAGTGCCTGGGGATGAAGAACCAAACTTGCCAGGCAATGTATTGGAACAGGCTACAGATGACAAGAGCCAGCAGGAAGCTTCAGCAGATGCCAATAAAGATTTGAATGTAAATACCAATATTGGAGAATCCTTAATCTCGCAAAATTCAACATTAGCTTCATCAACTTCTACTACAAATGATAAAGATGCCAAAGAAGCTGCAAAAGATAGCTCTGTAGGTAATGAGAATCAGGGAGATAAATCACAGAGCAGTGAAGAAACTGGCTTGAAAGAAAGTTCTGACGAGGGAACAGATGGTATTCAACATGACCCTATCGATGCTTCTGATACAACGACCCCTATACTGGAAGAAAGAGAGTCTAGGACGGATATGGACACGATGCCTGAAATCAGAAGTGAGGTTCAGAACACAGAGGAAGCTGTGGCTGAGTGA ATGTTCAAACAATCTCCTAGTAGGAATAATAGACCGAAAGGAATTAAAGTGAAGCACATTTTGCAAATCTGTGTCTTGTTGGCTGTCTGCATTTGGTTACTTTACCAAGTCAAGCATTCTCATGAGAAAAGGAAGGAATTTGAGGCAAAGGATGAGAAGGTTGTGGTGAAGGTTCAAAGTGATAGTGAGATCCAAAGATTTGGGAGAAAAGATATTCCTAGAATCACGGAGATAGATACAGACGGTGAAAAACATGAAGAAGATGAAGATGAAAAAGAAAGCGAAGAGGAAGATAACAAACACGAGGAGGATGAGCCGGAAAGAGAGGATGTCAGAATTATAGAGAGAGAAGAGGAAAGAGGAGGTGGAGATGATGAGATAGATGAACATGAACCAGAAAAGACCGAGACTGAGTCTGAGTCTGACCATGAAGATGAAGCTGTAGATGAAGATAAAGAAAGAGGAGAAAAAGAGGGTGTCACTGAAGAAAGCCATACTGAAAATGAGGATGTTCATGAAGGACTTCCTGAAAAGGAAGAGAATGAGGAGGATACTGGGAAGGAAGAAGGTCACACCGAGTCTGAAGAAAATGATGATGTTGATAACGAAGAACACAGTGAACGAGATGTCGCATCAGATGACCGGGATCATGATGTAGGGAGAACAAACACTCGTGAGGCCCAAGAGGAGCTTTACAGGGCAGATGATGCTTCCAGTGAAGTTACTCATGATGTTCAATCTATTATTCCAGAAACTAAGAACTTGACTTCAGGTCATGGAAATGAAATGTGGGGAAAGGTCAACTTTGGGCAGGATCATGAAAACAAAACCTCTGATGATGCTGAAGAGTTAAACAAACCCGAGGTACAATCAAGAGATGGGGCATCTAATGCAACAATTACTGAATCAAACAACTACGAGGTCAACACGACAAAACCTGATGATAACTCACTTCAGAACTCAACATTGCCTGAAATCACTAGTAATTTAACTGTTGTTGGTAGTGAAAATTCTGCTACTTTGCTTTCTAATGAAACACAGACGGTTCTTGATTCCCATTTATCCCAAAATGGCACAGTTAAAGTGCCTGGGGATGAAGAACCAAACTTGCCAGGCAATGTATTGGAACAGGCTACAGATGACAAGAGCCAGCAGGAAGCTTCAGCAGATGCCAATAAAGATTTGAATGTAAATACCAATATTGGAGAATCCTTAATCTCGCAAAATTCAACATTAGCTTCATCAACTTCTACTACAAATGATAAAGATGCCAAAGAAGCTGCAAAAGATAGCTCTGTAGGTAATGAGAATCAGGGAGATAAATCACAGAGCAGTGAAGAAACTGGCTTGAAAGAAAGTTCTGACGAGGGAACAGATGGTATTCAACATGACCCTATCGATGCTTCTGATACAACGACCCCTATACTGGAAGAAAGAGAGTCTAGGACGGATATGGACACGATGCCTGAAATCAGAAGTGAGGTTCAGAACACAGAGGAAGCTGTGGCTGAGTGA MFKQSPSRNNRPKGIKVKHILQICVLLAVCIWLLYQVKHSHEKRKEFEAKDEKVVVKVQSDSEIQRFGRKDIPRITEIDTDGEKHEEDEDEKESEEEDNKHEEDEPEREDVRIIEREEERGGGDDEIDEHEPEKTETESESDHEDEAVDEDKERGEKEGVTEESHTENEDVHEGLPEKEENEEDTGKEEGHTESEENDDVDNEEHSERDVASDDRDHDVGRTNTREAQEELYRADDASSEVTHDVQSIIPETKNLTSGHGNEMWGKVNFGQDHENKTSDDAEELNKPEVQSRDGASNATITESNNYEVNTTKPDDNSLQNSTLPEITSNLTVVGSENSATLLSNETQTVLDSHLSQNGTVKVPGDEEPNLPGNVLEQATDDKSQQEASADANKDLNVNTNIGESLISQNSTLASSTSTTNDKDAKEAAKDSSVGNENQGDKSQSSEETGLKESSDEGTDGIQHDPIDASDTTTPILEERESRTDMDTMPEIRSEVQNTEEAVAE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo19807.1 vs. NCBI nr
Match: gi|902219247|gb|KNA18254.1| (hypothetical protein SOVF_072630 [Spinacia oleracea]) HSP 1 Score: 896.7 bits (2316), Expect = 1.800e-257 Identity = 503/504 (99.80%), Postives = 503/504 (99.80%), Query Frame = 1
BLAST of Spo19807.1 vs. NCBI nr
Match: gi|731375261|ref|XP_010667197.1| (PREDICTED: myb-like protein X [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 534.6 bits (1376), Expect = 1.800e-148 Identity = 347/523 (66.35%), Postives = 408/523 (78.01%), Query Frame = 1
BLAST of Spo19807.1 vs. NCBI nr
Match: gi|225429143|ref|XP_002274729.1| (PREDICTED: dentin sialophosphoprotein [Vitis vinifera]) HSP 1 Score: 177.6 bits (449), Expect = 5.600e-41 Identity = 189/548 (34.49%), Postives = 281/548 (51.28%), Query Frame = 1
BLAST of Spo19807.1 vs. NCBI nr
Match: gi|590682706|ref|XP_007041417.1| (Pinin-like protein [Theobroma cacao]) HSP 1 Score: 175.3 bits (443), Expect = 2.800e-40 Identity = 189/564 (33.51%), Postives = 300/564 (53.19%), Query Frame = 1
BLAST of Spo19807.1 vs. NCBI nr
Match: gi|698458365|ref|XP_009781042.1| (PREDICTED: dentin sialophosphoprotein [Nicotiana sylvestris]) HSP 1 Score: 170.6 bits (431), Expect = 6.900e-39 Identity = 191/535 (35.70%), Postives = 281/535 (52.52%), Query Frame = 1
BLAST of Spo19807.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RH11_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_072630 PE=4 SV=1) HSP 1 Score: 896.7 bits (2316), Expect = 1.300e-257 Identity = 503/504 (99.80%), Postives = 503/504 (99.80%), Query Frame = 1
BLAST of Spo19807.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B6L8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_007320 PE=4 SV=1) HSP 1 Score: 534.6 bits (1376), Expect = 1.300e-148 Identity = 347/523 (66.35%), Postives = 408/523 (78.01%), Query Frame = 1
BLAST of Spo19807.1 vs. UniProtKB/TrEMBL
Match: F6HBP2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00630 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 3.900e-41 Identity = 189/548 (34.49%), Postives = 281/548 (51.28%), Query Frame = 1
BLAST of Spo19807.1 vs. UniProtKB/TrEMBL
Match: A0A061E4S9_THECC (Pinin-like protein OS=Theobroma cacao GN=TCM_006328 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.900e-40 Identity = 189/564 (33.51%), Postives = 300/564 (53.19%), Query Frame = 1
BLAST of Spo19807.1 vs. UniProtKB/TrEMBL
Match: V4RNN3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028128mg PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 4.900e-36 Identity = 186/566 (32.86%), Postives = 293/566 (51.77%), Query Frame = 1
BLAST of Spo19807.1 vs. TAIR (Arabidopsis)
Match: AT4G33740.1 (unknown protein) HSP 1 Score: 76.6 bits (187), Expect = 4.800e-14 Identity = 145/513 (28.27%), Postives = 247/513 (48.15%), Query Frame = 1
BLAST of Spo19807.1 vs. TAIR (Arabidopsis)
Match: AT2G22795.1 (unknown protein) HSP 1 Score: 52.8 bits (125), Expect = 7.300e-7 Identity = 148/528 (28.03%), Postives = 246/528 (46.59%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo19807.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo19807.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo19807.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Spo19807.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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