Spo19815 (gene)

Overview
NameSpo19815
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr4 : 119531410 .. 119534530 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATGGAGATTGAAGTGTATCATCTCACAGATATTGCATTTTCTTTTCTAGTCTGTAAATTACCGGCACAAAGTAAAGCTCGAATTGAAGAACTTTGGAGTATGGAGGTTGTAATTTGAGAAATCAAACTTATGAACATAAGCAGTCAGCAAAATGGAAAAGACTGTGTTCTTGGTGTAGATGTATTTTCAGAACCAGAGGAAATATCAGTACTGTACTACTGCTGCTATAATAAGATCATTTGTTGCAACAATTATGTAAATTTTGGTCAGTATAATGTTATGCTTCCTTTAGTTGTTGAAACAAGAGCAGAACTATTATTGTCATTGTGTAGTCTTATTTCGATTTTTTTACTCATTCTATTACAAGACTTTGTAGTGTGAAAAGTCAATTGAAAGTTATGAGGTTGATGATATACCATGCCCAACTTATTCGACCTAAAAATCAGACAACATCCGAAGAGATTTGAGAAGAAAATAATTCACAAATTCAAAATTCAATCCACGTGGGCATAATGATTTTGCACAAAATATTTTCCGAGTATGTCTGATTCGTAGTCGACAGGTGACATGATTTGAGTCATTTGACAGCTCTATCTAACTTAATGGCAAGTTGGCAATTCTAGTTTGACACAATAGCAATAGTATTCTTGTCTTCTTGATCATGTAGATTATGTGAGTAATTCTCTAACACCTAAGGAAAAGTTCACTTCTTGGCTCGACCGAAAGACGGGGAGAGGTTTATTTTTCTTTTAAATTCAACAATACATTCAAGTTTCGCAAAACCTAACGAAAATTGTTTAGAGTACATGATTCTTATTTTTCAGTTCAGTTTTGATTTTACTCGTGGTTATTAACTTACTGTGTGAATTCGTGATTATATTAAATGTTCATATTACATATTAATATAAAAAGGGGCACTACAATACACAAGTAACATACACTTTATTATTAGTGGTAAATATCGGTGCACTTCTTTTGTTGTAGATTTCTTGTACAACTGTCAACTATATGTCAATTTTTTGACCAATAAGGTCTTGGCCTAGTGGTTAAGATTATGTAATATGAACATTTAATATAATCACGAATTCACACAGTAAGTTAATAACCACGAGTAAAATCAAAACTGAACTGAAAAAGGGGCACTACAATACACAAGTAACATACACTTTATTATTAGTGGTAAATATCGGTGCACTTCTTTTGTTGTAGATTTCTTGTACAACTGTCAACTATATGTCATTTTTTTGACCAATAAGGTCTTGGCCTAGTGGTTAAGATCAAGGGCATGTGTATGATAGATTTCATATTCGAATCCTCTCGCCCCATAATATAATATTACCTAACCGGCTATTTTTACGCAATTTGAATTATACACCCGGGTGTACAAGTAGAATATTTGTACTATATTTTCTTTGGATTTGAATTTTATGTCCATTTACTGCTATTTATTTGGGATGAAAGCATATTCTTTATATTTGAATTATATATTTATTTAAAAATAGGATACATAATTGTGCACCCTAGTGTATAAAACATCTATTACTTCTATTTTTGACCATTAAGCATTAACATTTTAATACAAATATGTTTTAAACTTTTAGGGAGCGGCTAGTACGATCCTCACCAAAGAAGCCAGAAAAAAGGTTCTAGACGGGTCGGAAACATTTGCCACTGTTTGGCAAAACACAAAAATTCCATGGGTTTTAGATTTTCGGAGGTCTAAGTTTCTGCAAAGTTTACAGACCTTCTTCAAATTCGTAACTCCCATCACTCAAAACTCACTTACGTCCCCCATTGTCAATTTCAATCAGGTTCTCCTTCTCTCTCTAATTTTTGAAGTAATTGTCGAATTATTCTGGGGTTTTTCCGCTTCTTACTAGTTTTGTTTTTACGGAATCGATACTATTTTGTGCTGAATTGAACTGTTATGGATGATTATAAGAGGTTGGGAAGTTTAGCATTCGTGATTATATGGAATTTCTGGTGGTGGGTTTTGGTTGGAAGGGGGCGAATTTTTTATGCTAATTTGGACCTTTTTGTGATTTAATATAATGTCTTGTTTATTCATTTTCCTTCAAGATATAGAAAGTTGTGTTCTTGCATAGTTGCATTGTGAATTACAGGATTGTTTTCTGGGGAACTTTTTTCCCGTTTTTTTGCTGGGGAACTGATTCGAGAATTATGTTTATAAGAGTTAGGTGTTTGTGTAATTGTAGGTTATGCTTCATGTGAGCAATTGGGAGAAGTGATTTTATTATTGTTTTCAATCAACATTAGTCACCACTATACCTTAATTTTGTTGCATCCCAGGGATCATGGAATCCGGGGACTTTATTCTCTTTCATTTTTCTCACCTTGGGTGAACGGTAGTTATTTCAAGTTTTATCAGTGGATTCCAATCTTGTTAGCATTTATATTGGAATTGATAGTATTGAGTAAGTTGTGAGCTCCAAAATTTGGACTTGAAAGGGTTTTAGGGTTTATATGCTCATGTAAGATGCTCACTGTAGGATGCCAGGGTAGAATCTTCTTTCAAGTGGGAAAGAATTCTAATCTTATTATCATCTAGTATAGCAATTGATGGTGTTGAGTAAGTTGTGAGCTCCAAAATTTGGACTTGAGAGGGTTTTAGGGTTTATGGGCTCATGTATGATGCTCACTGTAGGATGCCAGGGGAGAATCTTCTTTCAAGTGGGAAATAATTATGAATTTTGCAGTCCTTCATTTGCTGAGTGTCTAAGCTCATGTGAGATATGGAGTATTTCACTAGAACTGGTGGATTAAATACTGTTATACTGATAAGACGAACTTCATGAGCACATTTAATGGCAAAAGTATTGATCTTGGTCCACTGGGAAAGAGGGAGATATTTTCTTGGGCAAGTACTATTTATTTTTATTGATTACCAAAGAGAGAAAATACAAGCTGTCATGCATCCTTGTTTAAGCTTCAAAGGATATCTCTGAGTCATTTCTTGAGAACACGTTCATGAATTTTTAGCTCCCTGTGACTCGATTATTAGACTTATGAGTAATGTCCGTAATCAGCCATTTCCAGCACCAACTAATATTGAGCTAATTTCTTTTTGTAGGGGTTCCCCCAAGCATATTTGTGA

mRNA sequence

ATGGAGATGGAGATTGAAGTGTATCATCTCACAGATATTGCATTTTCTTTTCTAGTCTGTAAATTACCGGCACAAAGTAAAGCTCGAATTGAAGAACTTTGGAGTATGGAGGTTGGAGCGGCTAGTACGATCCTCACCAAAGAAGCCAGAAAAAAGGTTCTAGACGGGTCGGAAACATTTGCCACTGTTTGGCAAAACACAAAAATTCCATGGGTTTTAGATTTTCGGAGGTCTAAGTTTCTGCAAAGTTTACAGACCTTCTTCAAATTCGTAACTCCCATCACTCAAAACTCACTTACGTCCCCCATTGTCAATTTCAATCAGGGGTTCCCCCAAGCATATTTGTGA

Coding sequence (CDS)

ATGGAGATGGAGATTGAAGTGTATCATCTCACAGATATTGCATTTTCTTTTCTAGTCTGTAAATTACCGGCACAAAGTAAAGCTCGAATTGAAGAACTTTGGAGTATGGAGGTTGGAGCGGCTAGTACGATCCTCACCAAAGAAGCCAGAAAAAAGGTTCTAGACGGGTCGGAAACATTTGCCACTGTTTGGCAAAACACAAAAATTCCATGGGTTTTAGATTTTCGGAGGTCTAAGTTTCTGCAAAGTTTACAGACCTTCTTCAAATTCGTAACTCCCATCACTCAAAACTCACTTACGTCCCCCATTGTCAATTTCAATCAGGGGTTCCCCCAAGCATATTTGTGA

Protein sequence

MEMEIEVYHLTDIAFSFLVCKLPAQSKARIEELWSMEVGAASTILTKEARKKVLDGSETFATVWQNTKIPWVLDFRRSKFLQSLQTFFKFVTPITQNSLTSPIVNFNQGFPQAYL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo19815.1Spo19815.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo19815.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19815.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19815.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo19815.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050896 response to stimulus
biological_process GO:0046685 response to arsenic-containing substance
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0009408 response to heat
biological_process GO:0009644 response to high light intensity
biological_process GO:0006457 protein folding
biological_process GO:0009816 defense response to bacterium, incompatible interaction
cellular_component GO:0000785 chromatin
cellular_component GO:0005618 cell wall
cellular_component GO:0005829 cytosol
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005622 intracellular
molecular_function GO:0003677 DNA binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0008270 zinc ion binding
RNA-Seq Expression