Spo19833 (gene) | SpinachBase

Overview


Name	Spo19833
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	40S ribosomal protein S12
Location	chr4 : 119177156 .. 119181754 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAATCGATCCCAAGATCACTTGGAACCGGGATGGAAGCTCTAACCAACTGAGCTATCCATCACTCTCTGCTAAGTGTGAGTGGTCAGTGGTTAGGATTTGCGTTAATGACGCGCGTTTTAGGATATTATGAGATCATGGAGTGTCTGCCAACGATGTGATTGATAATATCTTTTATTTATTGAATAAAAAAGTTTTAAAAAAGCAAAGAATTATTAACGTGTTACATTACAATTAGGGTCTTCCTAGTGTAACAATAATGTTTGACTGCTAGTCTGCTACTTCAATTGCGTCATATATATAAGTGTGTCTGACTCTTGATTCTTTCTGCTTAACCGGAACAACAAAATTTCCAGCATCAATTCATTGTTTATCCTCGACTTTTTGGCTTTTGATGATTCGGTGCATATGTTGTTGTTTGATGACGTTCAGATGTTGACTCTTCTAGTGGTGGCATGTTCAGATCAAACAAAATTGGGATTACTTGTAGATATGAAAATCCGAAATACATGCGTGGTTGCCTCTGTTGCTGATAACCACCGTATAATAACTTTCATCAAGGTAGATATGTTACTCATCCACCAATTAAACGAAAAAAGTAGAATGGACCATTTTTATTAAGTAATCATGAAATATCTCCCAGGGGGCAATATGTTATCGACTTCGAACCGAGAACAACTATGATATTTCAATAATAGGAAAGATCACATTGATAGATAACAACACAATTGAAAATCCAATATAACTTGGACTACGATTACTCTAATTTATCAAGCACAAGAAACAATCAAGATATTATTCAGTCTATCATTAGACACTTCAATACTTCAGAAACACAAACCCAAATTTTTCAAAGCAACTAATCGAATAACAAGAACATATATATAGAACAATGATCATGATACTTGCCTTTTGGATTGGTTACCGACCACCTCTTAATTCATCAACGTTTCCCTAGAGAGCACCCTTTCTGTCATGGGACTTGAGGCAACAAGTATTTAATTTCTTTTAATGAAGTTTTGTGAGTAATCTGGTGTATAATTTGTCCCGTTGATCCGTTTGGCTGCTGCGGTCGTTTTTTCTTCGAAGGCCGTTGTCAGATTGCGCCTGCTCCTTATTTGTTTAGCTTCCTTGAGAAGCTTTGTTTTGTTATTTTATTTTTCTTTTTAGTTCAGTTATTTTATTTTTAGTTTAGTTTGTTTAATTTTATTTTCATGTATTTTGTTATTACATATTAGCTTTTCCCTGAGATAGGGTAGCTTTTAGGTTCTTTGGTCTTTTCCCTGTGATAGGGAGACCTTAGAAAATGTGTACCTTTCCTTATAAAAATAAAATAAAGTAAAAAACGTTTTATAATGTTATGATAATATTGTTAGATTAATTCTTGCGTGGATCTGATCCATAATAATATTAGCATTGATACAAAATCAATAATTTTTTTAACACATTTTTACATACATAGTGACCTCTATTATTCATATAGTTACTTTAATTAATTAAACACCAAATTTCTCAGATATAATAATCATTTTTTGTATTATAGTAACCTATGTTTTTAAAACTTAACTGTGACTTAAAATCATATTATTCAAGCACAACATGTATCAACGATAGTCCATTTAAGAATTGGTGTAGATTATATGTGTACTTTTAGAATTTTATAGACAAAAGATCATTTTTTGTTTGCTTATTATTTAAGGTGATTAAATGAAATGATATCACAATACATAGTTTTTATATATTTGCACAATCGCGTGTATACAAGACTAGTCGTCTATACGGAGTTGTGAGGTGGGCTGATTATAGTTTGGGCCTCTCCGCAGAAAGCCCAATTAATAACTAGGGTTTTAGTAAGCTTACCCAGTGCTCCTGCTTTGAAATCGGAAATCGTGGGTTTATTAGGGTTTTTAAGAAAACTTTCAATTATCAAATCACTTGCCGCCGACTCTCCCTCTTCAGCTTCATCAGATTCTCCCTTCAGCTCTCCCACAGGTTTCTCTCTTTCAATTTTTAATCGTTTTTGTTAAAATTCATGAATTGTTCCTCTGCTGCTTTCATGCCTTACCTTTGATCTTCATTGTTTTAAGGTCGTGTTTAATATATGCGTGAAAGTAGCTGCAATATGAAATTATTTGAGCATTTTTAAAAGAGAAACGACGAATTTAAAGTTTAATAGGGACATCTAATAAATCCAGAAAATTCATTCTAGGAACGGATTAGGTCTGATTAACATAAAGGTTTTGTTGGATATGCTTCATGTAAAGTGTCCATCTAAAGTTGAATTGAACAACTTTTGGTTTGTAGATGAGTGTAGATGGTAACTGTAAGTTCCCAATTAAATAATCCTATCAACAAGTTTCGAATACCCAATTCCGGCTTTTTGAGGTATAATAAACCAGGCATTGTTCATTGGACTGTGTTGTACTAAAATTCGACTGCTATCTCTGAAATAATTTGTTCAGCCAGTTCAAAATATATGTACTCCATATATGATTAATTTCGAGAATTAATTGGGAACTCAATGGTAGAGCTCACACCTCCCAAAAGAAATATAGTAGCACTGTCCTTTCCTGCAAGATGGTTTTATCGGCATTAAAAAGCTTAAATAATGTGGTATGTACAGAAATGCATTGTAATACTTCTTTAGAAGAACATGTTACATTTAATAATGCAAGAAAACCAATGACATTGTTTTGAGTGTGTACATAATTAGATAGGAGCAAAAAAGTTACAGTCTTGTAGAAAGTTAATAGTACATCTGATCAGTAGATTAAAATTCAAATTGCATTTCTTGTATGTATCCAAGGTCATTGAGGTAAGCTTCCTCAATATCTGATTAGAATATTTAGTGTATGTAATTTTAACTTATTCTTTTGGTTCTTTTGTCACAGGATAAAAGAAAATTATCATCAATTTACACAATGTCTGGGTATGTATCTGTGTCTCATTGGCTTGATTTCCATCTCTTTTGCTTGTTCAACTTTCAATTAATTTGATATGAAGGATTGAACGCCTGAGTTTTTACACGGTTATTGGTTATATTTCAGTGAGGAGGTTGCCGCTGCTGTTCCTGCTACTGAGACCCCTACTCCATTAGTGGGGGAGACCATGGACCTGATGACAGCTCTTCAGCTTGTGTTGAAGAAGTCTCTTGCACATGGTGGCCTATGCCGTGGTCTTCATGAGGGTGCCAAAGTGATTGAAAAGCATGCTGCTCAGCTATGCTTGTTGGCAGAAGATTGTGACCAGCCTGATTATGTCAAATTAGTCAAGGCTCTATGTGCTGAGCACAATGTTAACTTGCTAACTATTCCAAGTGCCAAGACCTTAGGCGAGTGGTCTGGTGTAAGTTACTTTACCCTCCTCTTCCTTGCCTGTTTTTATGAATTTTCCAAGTAATTTGATCAGTTGGCTAGGGTATGTGAATTTGTTTGTTTGCTCGTAATCGAGTGCATTTCTTGTTATCCTACTCTTCTTTCTTGTTTTGTTATGTGATACGATCCATTCAAGTACCACAGCTTATAGAAATAGCTATTCTGAATTATGTTTGGTGTTCACTCATGCAAGCTAAAATTTTAATACGTATGCAGCTGTGCAAGATTGATTCAGAGGGGAAAGCAAGGAAAGTAGTCGGATGCTCATGTGTGGTTGTGAAGGTAGATCCCTTATATTGTTATTATTGGTGTTTTAGAAGTACAAGTTTCTAAATTGGTTGGCTAAAACCCTCTTTTGTTTGATGTTTTAGGACTTCGGTGAAGAGTCAGAAGGACTCAATGTGGTTCAGCAGCACATCAAGTCTCACTGAAACTCTCATATGAGATCCTTATCTAAGATAGGCCATGTTTAAGAATTTTGTTCTGTAGTTTATTGCATTTTGAAGATGTGACTTCCTTACAGAGAATTTTATGATTGGTTTTTGGTGCTAAATGCAATCAGAACAAATTGCAGTATCTTCTCTGGTTTCTAGACTTCATTCATTCTCTCGTTATTGAGTTGTTTGCTAATCTAGGTTTGATGTTAGGGGTTGATTGTTTTAGGAATGTGCTCGTGTTCTTTCTCAACTAAGCGCCTATTAACCATACATTTGCAACATCAATGTTTTTTCGGAACCATTTCCCAAAATAGTGTATAAAATAAAAAAAATTCTCAATCTAGTGTTTCCCCAAAAATATTTCCTTCTTCTAGTGTCCACGTAGACTCGGACTTCCCGAACCTAATTAAACCCCAAAAAAATGAAAACCACGGCAGATAATTAAAATCAAAAAATAAATAAAATTGCTTCACCTTCTTCGATCCCGCAATAACAAATCATCTCCTTCAAAAGAAGAGTCAAGCTTTTCTCCTTCAAAGGCAGAGTCAGGCATATATATCTCTTATTCTCCTTCAAGTTGAAGAAGCAACAATCCACCATTGCGCATCAAGCCATCACCACCTTCAAATGCAAATTATAATTACCAGGTAATGCTTTCCTAAAAATTGTCTTAGTTTTACAATCAATTACAGAAAACATTGGTGGGGAAGTTGATTATTGAAAAAAAATGTTGAGGCATCAAGTATTCAAGTTCGTATAAGAAATTGATTCTTGATAATTAGTTAG

mRNA sequence

ATGAGAATCGATCCCAAGATCACTTGGAACCGGGATGGAAGCTCTAACCAACTGAGCTATCCATCACTCTCTGCTAAGTAAAACTTTCAATTATCAAATCACTTGCCGCCGACTCTCCCTCTTCAGCTTCATCAGATTCTCCCTTCAGCTCTCCCACAGGATAAAAGAAAATTATCATCAATTTACACAATGTCTGGTGAGGAGGTTGCCGCTGCTGTTCCTGCTACTGAGACCCCTACTCCATTAGTGGGGGAGACCATGGACCTGATGACAGCTCTTCAGCTTGTGTTGAAGAAGTCTCTTGCACATGGTGGCCTATGCCGTGGTCTTCATGAGGGTGCCAAAGTGATTGAAAAGCATGCTGCTCAGCTATGCTTGTTGGCAGAAGATTGTGACCAGCCTGATTATGTCAAATTAGTCAAGGCTCTATGTGCTGAGCACAATGTTAACTTGCTAACTATTCCAAGTGCCAAGACCTTAGGCGAGTGGTCTGGTCTGTGCAAGATTGATTCAGAGGGGAAAGCAAGGAAAGTAGTCGGATGCTCATGTGTGGTTGTGAAGGACTTCGGTGAAGAGTCAGAAGGACTCAATGTGGTTCAGCAGCACATCAAGTCTCACTGAAACTCTCATATGAGATCCTTATCTAAGATAGGCCATGTTTAAGAATTTTGTTCTGTAGTTTATTGCATTTTGAAGATGTGACTTCCTTACAGAGAATTTTATGATTGGTTTTTGGTGCTAAATGCAATCAGAACAAATTGCAGTATCTTCTCTGGTTTCTAGACTTCATTCATTCTCTCGTTATTGAGTTGTTTGCTAATCTAGGTTTGATGTTAGGGGTTGATTGTTTTAGGAATGTGCTCGTGTTCTTTCTCAACTAAGCGCCTATTAACCATACATTTGCAACATCAATGTTTTTTCGGAACCATTTCCCAAAATAGTGTATAAAATAAAAAAAATTCTCAATCTAGTGTTTCCCCAAAAATATTTCCTTCTTCTAGTGTCCACGTAGACTCGGACTTCCCGAACCTAATTAAACCCCAAAAAAATGAAAACCACGGCAGATAATTAAAATCAAAAAATAAATAAAATTGCTTCACCTTCTTCGATCCCGCAATAACAAATCATCTCCTTCAAAAGAAGAGTCAAGCTTTTCTCCTTCAAAGGCAGAGTCAGGCATATATATCTCTTATTCTCCTTCAAGTTGAAGAAGCAACAATCCACCATTGCGCATCAAGCCATCACCACCTTCAAATGCAAATTATAATTACCAGGTAATGCTTTCCTAAAAATTGTCTTAGTTTTACAATCAATTACAGAAAACATTGGTGGGGAAGTTGATTATTGAAAAAAAATGTTGAGGCATCAAGTATTCAAGTTCGTATAAGAAATTGATTCTTGATAATTAGTTAG

Coding sequence (CDS)

ATGTCTGGTGAGGAGGTTGCCGCTGCTGTTCCTGCTACTGAGACCCCTACTCCATTAGTGGGGGAGACCATGGACCTGATGACAGCTCTTCAGCTTGTGTTGAAGAAGTCTCTTGCACATGGTGGCCTATGCCGTGGTCTTCATGAGGGTGCCAAAGTGATTGAAAAGCATGCTGCTCAGCTATGCTTGTTGGCAGAAGATTGTGACCAGCCTGATTATGTCAAATTAGTCAAGGCTCTATGTGCTGAGCACAATGTTAACTTGCTAACTATTCCAAGTGCCAAGACCTTAGGCGAGTGGTCTGGTCTGTGCAAGATTGATTCAGAGGGGAAAGCAAGGAAAGTAGTCGGATGCTCATGTGTGGTTGTGAAGGACTTCGGTGAAGAGTCAGAAGGACTCAATGTGGTTCAGCAGCACATCAAGTCTCACTGA

Protein sequence

MSGEEVAAAVPATETPTPLVGETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAAQLCLLAEDCDQPDYVKLVKALCAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCSCVVVKDFGEESEGLNVVQQHIKSH

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo19833.1	Spo19833.1	mRNA

Homology

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BLAST of Spo19833.1 vs. NCBI nr
Match: gi|902233956|gb|KNA23271.1| (hypothetical protein SOVF_026510 [Spinacia oleracea])

HSP 1 Score: 288.5 bits (737), Expect = 6.400e-75
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1

		  
Query: 1   MSGEEVAAAVPATETPTPLVGETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAAQ 60
           MSGEEVAAAVPATETPTPLVGETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAAQ
Sbjct: 1   MSGEEVAAAVPATETPTPLVGETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAAQ 60

Query: 61  LCLLAEDCDQPDYVKLVKALCAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCSC 120
           LCLLAEDCDQPDYVKLVKALCAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCSC
Sbjct: 61  LCLLAEDCDQPDYVKLVKALCAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCSC 120

Query: 121 VVVKDFGEESEGLNVVQQHIKSH 144
           VVVKDFGEESEGLNVVQQHIKSH
Sbjct: 121 VVVKDFGEESEGLNVVQQHIKSH 143

[Close]

BLAST of Spo19833.1 vs. NCBI nr
Match: gi|731360035|ref|XP_010691599.1| (PREDICTED: 40S ribosomal protein S12 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 261.9 bits (668), Expect = 6.400e-67
Identity = 130/143 (90.91%), Postives = 136/143 (95.10%), Query Frame = 1

		  
Query: 1   MSGEEVAAAVPATETPTPLVGETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAAQ 60
           MSGEEVA A P  ETP PL GETMDLMTALQLVLKKSLAHGGL RGLHEGAKVIEKHAAQ
Sbjct: 1   MSGEEVAVAAPVPETPAPL-GETMDLMTALQLVLKKSLAHGGLSRGLHEGAKVIEKHAAQ 60

Query: 61  LCLLAEDCDQPDYVKLVKALCAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCSC 120
           LCLLAEDCDQPDYVKLVKALCAEHNV+LLT+PSAKTLGEW+GLCKIDSEGKARKVVGCSC
Sbjct: 61  LCLLAEDCDQPDYVKLVKALCAEHNVDLLTVPSAKTLGEWAGLCKIDSEGKARKVVGCSC 120

Query: 121 VVVKDFGEESEGLNVVQQHIKSH 144
           VVVKD+GEE+EGL+VVQQHIKSH
Sbjct: 121 VVVKDYGEETEGLHVVQQHIKSH 142

[Close]

BLAST of Spo19833.1 vs. NCBI nr
Match: gi|902227369|gb|KNA20658.1| (hypothetical protein SOVF_050270 [Spinacia oleracea])

HSP 1 Score: 256.9 bits (655), Expect = 2.100e-65
Identity = 128/142 (90.14%), Postives = 134/142 (94.37%), Query Frame = 1

		  
Query: 1   MSGEEVAAAVPATETPTPLVGETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAAQ 60
           MSGEEVA AVPATETPTPL GETMDLMTALQLVLKKS AHGGL RGLH+ AKVIEKHAAQ
Sbjct: 1   MSGEEVAVAVPATETPTPL-GETMDLMTALQLVLKKSTAHGGLIRGLHQSAKVIEKHAAQ 60

Query: 61  LCLLAEDCDQPDYVKLVKALCAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCSC 120
           LCLLAEDCDQPDY KLVKALC+EHNV+LLT+PSAKTLGEW+GLCKIDSEGKARKVVGCSC
Sbjct: 61  LCLLAEDCDQPDYFKLVKALCSEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVVGCSC 120

Query: 121 VVVKDFGEESEGLNVVQQHIKS 143
           VVVKD+GEESE LN VQQHIKS
Sbjct: 121 VVVKDYGEESEALNFVQQHIKS 141

[Close]

BLAST of Spo19833.1 vs. NCBI nr
Match: gi|565365292|ref|XP_006349349.1| (PREDICTED: 40S ribosomal protein S12-like [Solanum tuberosum])

HSP 1 Score: 248.4 bits (633), Expect = 7.300e-63
Identity = 115/143 (80.42%), Postives = 134/143 (93.71%), Query Frame = 1

		  
Query: 1   MSGEEVAAAVPATETPTPLVGETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAAQ 60
           MSGE+ A AVPA ETP+P +GE MD+MTALQLVL+KS AHGGL RGLHEGAKVIEKHAAQ
Sbjct: 1   MSGEDAAVAVPAVETPSPALGEPMDIMTALQLVLRKSKAHGGLARGLHEGAKVIEKHAAQ 60

Query: 61  LCLLAEDCDQPDYVKLVKALCAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCSC 120
           LC+LAEDCDQPDYVKLVK LCA+HNV+L+T+P+AKTLGEW+GLCKIDSEGKARKVVGC C
Sbjct: 61  LCVLAEDCDQPDYVKLVKGLCADHNVSLITVPNAKTLGEWAGLCKIDSEGKARKVVGCGC 120

Query: 121 VVVKDFGEESEGLNVVQQHIKSH 144
           VVVKD+GEE+EGL++VQ+++KSH
Sbjct: 121 VVVKDYGEETEGLHIVQEYVKSH 143

[Close]

BLAST of Spo19833.1 vs. NCBI nr
Match: gi|460369234|ref|XP_004230468.1| (PREDICTED: 40S ribosomal protein S12-like isoform X1 [Solanum lycopersicum])

HSP 1 Score: 248.1 bits (632), Expect = 9.600e-63
Identity = 115/143 (80.42%), Postives = 133/143 (93.01%), Query Frame = 1

		  
Query: 1   MSGEEVAAAVPATETPTPLVGETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAAQ 60
           MSGE+ A AVPA ETP P +GE MD+MTALQLVL+KS AHGGL RGLHEGAKVIEKHAAQ
Sbjct: 1   MSGEDAAVAVPAVETPAPALGEPMDIMTALQLVLRKSKAHGGLARGLHEGAKVIEKHAAQ 60

Query: 61  LCLLAEDCDQPDYVKLVKALCAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCSC 120
           LC+LAEDCDQPDYVKLVK LCA+HNV+L+T+P+AKTLGEW+GLCKIDSEGKARKVVGC C
Sbjct: 61  LCVLAEDCDQPDYVKLVKGLCADHNVSLITVPNAKTLGEWAGLCKIDSEGKARKVVGCGC 120

Query: 121 VVVKDFGEESEGLNVVQQHIKSH 144
           VVVKD+GEE+EGL++VQ+++KSH
Sbjct: 121 VVVKDYGEETEGLHIVQEYVKSH 143

[Close]

BLAST of Spo19833.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RUR2_SPIOL (40S ribosomal protein S12 OS=Spinacia oleracea GN=SOVF_026510 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 4.500e-75
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1

		  
Query: 1   MSGEEVAAAVPATETPTPLVGETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAAQ 60
           MSGEEVAAAVPATETPTPLVGETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAAQ
Sbjct: 1   MSGEEVAAAVPATETPTPLVGETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAAQ 60

Query: 61  LCLLAEDCDQPDYVKLVKALCAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCSC 120
           LCLLAEDCDQPDYVKLVKALCAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCSC
Sbjct: 61  LCLLAEDCDQPDYVKLVKALCAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCSC 120

Query: 121 VVVKDFGEESEGLNVVQQHIKSH 144
           VVVKDFGEESEGLNVVQQHIKSH
Sbjct: 121 VVVKDFGEESEGLNVVQQHIKSH 143

[Close]

BLAST of Spo19833.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BI12_BETVU (40S ribosomal protein S12 OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g223120 PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 4.500e-67
Identity = 130/143 (90.91%), Postives = 136/143 (95.10%), Query Frame = 1

		  
Query: 1   MSGEEVAAAVPATETPTPLVGETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAAQ 60
           MSGEEVA A P  ETP PL GETMDLMTALQLVLKKSLAHGGL RGLHEGAKVIEKHAAQ
Sbjct: 1   MSGEEVAVAAPVPETPAPL-GETMDLMTALQLVLKKSLAHGGLSRGLHEGAKVIEKHAAQ 60

Query: 61  LCLLAEDCDQPDYVKLVKALCAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCSC 120
           LCLLAEDCDQPDYVKLVKALCAEHNV+LLT+PSAKTLGEW+GLCKIDSEGKARKVVGCSC
Sbjct: 61  LCLLAEDCDQPDYVKLVKALCAEHNVDLLTVPSAKTLGEWAGLCKIDSEGKARKVVGCSC 120

Query: 121 VVVKDFGEESEGLNVVQQHIKSH 144
           VVVKD+GEE+EGL+VVQQHIKSH
Sbjct: 121 VVVKDYGEETEGLHVVQQHIKSH 142

[Close]

BLAST of Spo19833.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RMF6_SPIOL (40S ribosomal protein S12 OS=Spinacia oleracea GN=SOVF_050270 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.400e-65
Identity = 128/142 (90.14%), Postives = 134/142 (94.37%), Query Frame = 1

		  
Query: 1   MSGEEVAAAVPATETPTPLVGETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAAQ 60
           MSGEEVA AVPATETPTPL GETMDLMTALQLVLKKS AHGGL RGLH+ AKVIEKHAAQ
Sbjct: 1   MSGEEVAVAVPATETPTPL-GETMDLMTALQLVLKKSTAHGGLIRGLHQSAKVIEKHAAQ 60

Query: 61  LCLLAEDCDQPDYVKLVKALCAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCSC 120
           LCLLAEDCDQPDY KLVKALC+EHNV+LLT+PSAKTLGEW+GLCKIDSEGKARKVVGCSC
Sbjct: 61  LCLLAEDCDQPDYFKLVKALCSEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVVGCSC 120

Query: 121 VVVKDFGEESEGLNVVQQHIKS 143
           VVVKD+GEESE LN VQQHIKS
Sbjct: 121 VVVKDYGEESEALNFVQQHIKS 141

[Close]

BLAST of Spo19833.1 vs. UniProtKB/TrEMBL
Match: M1CBU3_SOLTU (40S ribosomal protein S12 OS=Solanum tuberosum GN=PGSC0003DMG400024929 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 5.100e-63
Identity = 115/143 (80.42%), Postives = 134/143 (93.71%), Query Frame = 1

		  
Query: 1   MSGEEVAAAVPATETPTPLVGETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAAQ 60
           MSGE+ A AVPA ETP+P +GE MD+MTALQLVL+KS AHGGL RGLHEGAKVIEKHAAQ
Sbjct: 1   MSGEDAAVAVPAVETPSPALGEPMDIMTALQLVLRKSKAHGGLARGLHEGAKVIEKHAAQ 60

Query: 61  LCLLAEDCDQPDYVKLVKALCAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCSC 120
           LC+LAEDCDQPDYVKLVK LCA+HNV+L+T+P+AKTLGEW+GLCKIDSEGKARKVVGC C
Sbjct: 61  LCVLAEDCDQPDYVKLVKGLCADHNVSLITVPNAKTLGEWAGLCKIDSEGKARKVVGCGC 120

Query: 121 VVVKDFGEESEGLNVVQQHIKSH 144
           VVVKD+GEE+EGL++VQ+++KSH
Sbjct: 121 VVVKDYGEETEGLHIVQEYVKSH 143

[Close]

BLAST of Spo19833.1 vs. UniProtKB/TrEMBL
Match: K4B1V5_SOLLC (40S ribosomal protein S12 OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 6.700e-63
Identity = 115/143 (80.42%), Postives = 133/143 (93.01%), Query Frame = 1

		  
Query: 1   MSGEEVAAAVPATETPTPLVGETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAAQ 60
           MSGE+ A AVPA ETP P +GE MD+MTALQLVL+KS AHGGL RGLHEGAKVIEKHAAQ
Sbjct: 1   MSGEDAAVAVPAVETPAPALGEPMDIMTALQLVLRKSKAHGGLARGLHEGAKVIEKHAAQ 60

Query: 61  LCLLAEDCDQPDYVKLVKALCAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCSC 120
           LC+LAEDCDQPDYVKLVK LCA+HNV+L+T+P+AKTLGEW+GLCKIDSEGKARKVVGC C
Sbjct: 61  LCVLAEDCDQPDYVKLVKGLCADHNVSLITVPNAKTLGEWAGLCKIDSEGKARKVVGCGC 120

Query: 121 VVVKDFGEESEGLNVVQQHIKSH 144
           VVVKD+GEE+EGL++VQ+++KSH
Sbjct: 121 VVVKDYGEETEGLHIVQEYVKSH 143

[Close]

BLAST of Spo19833.1 vs. ExPASy Swiss-Prot
Match: RS12_HORVU (40S ribosomal protein S12 OS=Hordeum vulgare GN=RPS12 PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.700e-59
Identity = 110/142 (77.46%), Postives = 126/142 (88.73%), Query Frame = 1

		  
Query: 1   MSGEEVAAAVPATETPTPLVGETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAAQ 60
           M+ E  A  V   E PTP++GE MDLMTALQLV+KKS AH GL +GL E AK IEKHAAQ
Sbjct: 1   MAEEAPAPVVAPVEAPTPILGEPMDLMTALQLVMKKSSAHDGLVKGLREAAKSIEKHAAQ 60

Query: 61  LCLLAEDCDQPDYVKLVKALCAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCSC 120
           LC+LAEDCDQPDYVKLVKALCAEHNV+L+T+PSAKTLGEW+GLCKID+EGKARKVVGCSC
Sbjct: 61  LCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKVVGCSC 120

Query: 121 VVVKDFGEESEGLNVVQQHIKS 143
           +VVKD+GEESEGLN+VQQ++KS
Sbjct: 121 IVVKDYGEESEGLNIVQQYVKS 142

[Close]

BLAST of Spo19833.1 vs. ExPASy Swiss-Prot
Match: RS122_ARATH (40S ribosomal protein S12-2 OS=Arabidopsis thaliana GN=RPS12C PE=1 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 9.300e-50
Identity = 95/144 (65.97%), Postives = 120/144 (83.33%), Query Frame = 1

		  
Query: 1   MSGEE-VAAAVPATETPTPLVGETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAA 60
           MSG+E VAA V        ++ E MD+ TAL+L ++KS A+GG+ RGLHE AK+IEK  A
Sbjct: 1   MSGDEAVAAPVVPPVAEAAVIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNA 60

Query: 61  QLCLLAEDCDQPDYVKLVKALCAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCS 120
           QLC+LAEDC+QPDYVKLVKALCA+H++ LLT+PSAKTLGEW+GLCKIDSEG ARKVVGCS
Sbjct: 61  QLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 120

Query: 121 CVVVKDFGEESEGLNVVQQHIKSH 144
           C+V+KDFGEE+  LN+V++H+ S+
Sbjct: 121 CLVIKDFGEETTALNIVKKHLDSN 144

[Close]

BLAST of Spo19833.1 vs. ExPASy Swiss-Prot
Match: RS121_ARATH (40S ribosomal protein S12-1 OS=Arabidopsis thaliana GN=RPS12A PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 6.000e-49
Identity = 97/143 (67.83%), Postives = 115/143 (80.42%), Query Frame = 1

		  
Query: 1   MSGEEVA-AAVPATETPTPLVGETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAA 60
           MSG+E A   VP        + E MDLMTAL+L L+K+ A+GG+ RGLHE AK+IEK  A
Sbjct: 1   MSGDEAAPVVVPPPVAEPAAIPEDMDLMTALELTLRKARAYGGVVRGLHECAKLIEKRVA 60

Query: 61  QLCLLAEDCDQPDYVKLVKALCAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCS 120
           QL +LAEDC+QPDYVKLVKALCA+H V LLT+PSAKTLGEW+GLCKIDSEG ARKVVGCS
Sbjct: 61  QLVVLAEDCNQPDYVKLVKALCADHEVRLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 120

Query: 121 CVVVKDFGEESEGLNVVQQHIKS 143
           C+VVKDFGEE+  L++V +HI S
Sbjct: 121 CLVVKDFGEETTALSIVNKHIAS 143

[Close]

BLAST of Spo19833.1 vs. ExPASy Swiss-Prot
Match: RS12_PIG (40S ribosomal protein S12 OS=Sus scrofa GN=RPS12 PE=2 SV=2)

HSP 1 Score: 159.1 bits (401), Expect = 3.700e-38
Identity = 73/121 (60.33%), Postives = 93/121 (76.86%), Query Frame = 1

		  
Query: 21  GETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAAQLCLLAEDCDQPDYVKLVKAL 80
           G  MD+ TALQ VLK +L H GL RG+ E AK ++K  A LC+LA +CD+P YVKLV+AL
Sbjct: 9   GGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEAL 68

Query: 81  CAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCSCVVVKDFGEESEGLNVVQQHI 140
           CAEH +NL+ +   K LGEW GLCKID EGK RKVVGCSCVVVKD+G+ES+  +V++++ 
Sbjct: 69  CAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYF 128

Query: 141 K 142
           K
Sbjct: 129 K 129

[Close]

BLAST of Spo19833.1 vs. ExPASy Swiss-Prot
Match: RS12_CHICK (40S ribosomal protein S12 OS=Gallus gallus GN=RPS12 PE=1 SV=2)

HSP 1 Score: 159.1 bits (401), Expect = 3.700e-38
Identity = 73/121 (60.33%), Postives = 93/121 (76.86%), Query Frame = 1

		  
Query: 21  GETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAAQLCLLAEDCDQPDYVKLVKAL 80
           G  MD+ TALQ VLK +L H GL RG+ E AK ++K  A LC+LA +CD+P YVKLV+AL
Sbjct: 9   GGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEAL 68

Query: 81  CAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCSCVVVKDFGEESEGLNVVQQHI 140
           CAEH +NL+ +   K LGEW GLCKID EGK RKVVGCSCVVVKD+G+ES+  +V++++ 
Sbjct: 69  CAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYF 128

Query: 141 K 142
           K
Sbjct: 129 K 129

[Close]

BLAST of Spo19833.1 vs. TAIR (Arabidopsis)
Match: AT2G32060.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 197.6 bits (501), Expect = 5.200e-51
Identity = 95/144 (65.97%), Postives = 120/144 (83.33%), Query Frame = 1

		  
Query: 1   MSGEE-VAAAVPATETPTPLVGETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAA 60
           MSG+E VAA V        ++ E MD+ TAL+L ++KS A+GG+ RGLHE AK+IEK  A
Sbjct: 1   MSGDEAVAAPVVPPVAEAAVIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNA 60

Query: 61  QLCLLAEDCDQPDYVKLVKALCAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCS 120
           QLC+LAEDC+QPDYVKLVKALCA+H++ LLT+PSAKTLGEW+GLCKIDSEG ARKVVGCS
Sbjct: 61  QLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 120

Query: 121 CVVVKDFGEESEGLNVVQQHIKSH 144
           C+V+KDFGEE+  LN+V++H+ S+
Sbjct: 121 CLVIKDFGEETTALNIVKKHLDSN 144

[Close]

BLAST of Spo19833.1 vs. TAIR (Arabidopsis)
Match: AT1G15930.2 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 194.9 bits (494), Expect = 3.400e-50
Identity = 97/143 (67.83%), Postives = 115/143 (80.42%), Query Frame = 1

		  
Query: 1   MSGEEVA-AAVPATETPTPLVGETMDLMTALQLVLKKSLAHGGLCRGLHEGAKVIEKHAA 60
           MSG+E A   VP        + E MDLMTAL+L L+K+ A+GG+ RGLHE AK+IEK  A
Sbjct: 1   MSGDEAAPVVVPPPVAEPAAIPEDMDLMTALELTLRKARAYGGVVRGLHECAKLIEKRVA 60

Query: 61  QLCLLAEDCDQPDYVKLVKALCAEHNVNLLTIPSAKTLGEWSGLCKIDSEGKARKVVGCS 120
           QL +LAEDC+QPDYVKLVKALCA+H V LLT+PSAKTLGEW+GLCKIDSEG ARKVVGCS
Sbjct: 61  QLVVLAEDCNQPDYVKLVKALCADHEVRLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 120

Query: 121 CVVVKDFGEESEGLNVVQQHIKS 143
           C+VVKDFGEE+  L++V +HI S
Sbjct: 121 CLVVKDFGEETTALSIVNKHIAS 143

The following BLAST results are available for this feature:

BLAST of Spo19833.1 vs. NCBI nr
BLAST of Spo19833.1 vs. UniProtKB/TrEMBL
BLAST of Spo19833.1 vs. ExPASy Swiss-Prot
BLAST of Spo19833.1 vs. TAIR (Arabidopsis)

BLAST of Spo19833.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902233956\|gb\|KNA23271.1\|	6.4e-75	100.	hypothetical protein SOVF_0265...	[more]
gi\|731360035\|ref\|XP_010691599.1\|	6.4e-67	90.9	PREDICTED: 40S ribosomal prote...	[more]
gi\|902227369\|gb\|KNA20658.1\|	2.1e-65	90.1	hypothetical protein SOVF_0502...	[more]
gi\|565365292\|ref\|XP_006349349.1\|	7.3e-63	80.4	PREDICTED: 40S ribosomal prote...	[more]
gi\|460369234\|ref\|XP_004230468.1\|	9.6e-63	80.4	PREDICTED: 40S ribosomal prote...	[more]

BLAST of Spo19833.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9RUR2_SPIOL	4.5e-75	100.	40S ribosomal protein S12 OS=S...	[more]
A0A0J8BI12_BETVU	4.5e-67	90.9	40S ribosomal protein S12 OS=B...	[more]
A0A0K9RMF6_SPIOL	1.4e-65	90.1	40S ribosomal protein S12 OS=S...	[more]
M1CBU3_SOLTU	5.1e-63	80.4	40S ribosomal protein S12 OS=S...	[more]
K4B1V5_SOLLC	6.7e-63	80.4	40S ribosomal protein S12 OS=S...	[more]

BLAST of Spo19833.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
RS12_HORVU	1.7e-59	77.4	40S ribosomal protein S12 OS=H...	[more]
RS122_ARATH	9.3e-50	65.9	40S ribosomal protein S12-2 OS...	[more]
RS121_ARATH	6.0e-49	67.8	40S ribosomal protein S12-1 OS...	[more]
RS12_PIG	3.7e-38	60.3	40S ribosomal protein S12 OS=S...	[more]
RS12_CHICK	3.7e-38	60.3	40S ribosomal protein S12 OS=G...	[more]

BLAST of Spo19833.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT2G32060.1	5.2e-51	65.9	Ribosomal protein L7Ae/L30e/S1...	[more]
AT1G15930.2	3.4e-50	67.8	Ribosomal protein L7Ae/L30e/S1...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000530	Ribosomal protein S12e	PRINTS	PR00972	RIBSOMALS12E	coord: 47..63 score: 1.6E-24coord: 113..126 score: 1.6E-24coord: 33..46 score: 1.6E-24coord: 88..109 score: 1.6
IPR000530	Ribosomal protein S12e	PANTHER	PTHR11843	40S RIBOSOMAL PROTEIN S12	coord: 2..143 score: 5.1
IPR000530	Ribosomal protein S12e	PROSITE	PS01189	RIBOSOMAL_S12E	coord: 29..47 scor
IPR004038	Ribosomal protein L7Ae/L30e/S12e/Gadd45	PFAM	PF01248	Ribosomal_L7Ae	coord: 29..122 score: 1.2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0006508	proteolysis
biological_process	GO:0000478	endonucleolytic cleavage involved in rRNA processing
biological_process	GO:0009409	response to cold
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0006626	protein targeting to mitochondrion
biological_process	GO:0006228	UTP biosynthetic process
biological_process	GO:0009585	red, far-red light phototransduction
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006165	nucleoside diphosphate phosphorylation
biological_process	GO:0006457	protein folding
biological_process	GO:0006183	GTP biosynthetic process
biological_process	GO:0006241	CTP biosynthetic process
biological_process	GO:0051607	defense response to virus
biological_process	GO:0006399	tRNA metabolic process
biological_process	GO:0045036	protein targeting to chloroplast
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0007062	sister chromatid cohesion
biological_process	GO:0006531	aspartate metabolic process
biological_process	GO:0006529	asparagine biosynthetic process
biological_process	GO:0006522	alanine metabolic process
biological_process	GO:0006177	GMP biosynthetic process
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0006414	translational elongation
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0031118	rRNA pseudouridine synthesis
biological_process	GO:0006099	tricarboxylic acid cycle
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0006412	translation
biological_process	GO:0045595	regulation of cell differentiation
biological_process	GO:0010564	regulation of cell cycle process
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0010072	primary shoot apical meristem specification
biological_process	GO:0009880	embryonic pattern specification
biological_process	GO:0048825	cotyledon development
biological_process	GO:0051301	cell division
biological_process	GO:0015976	carbon utilization
biological_process	GO:0008152	metabolic process
biological_process	GO:0006541	glutamine metabolic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0016075	rRNA catabolic process
biological_process	GO:0006566	threonine metabolic process
biological_process	GO:0030163	protein catabolic process
biological_process	GO:0010075	regulation of meristem growth
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0006364	rRNA processing
biological_process	GO:0001510	RNA methylation
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0010197	polar nucleus fusion
biological_process	GO:0006631	fatty acid metabolic process
biological_process	GO:0006434	seryl-tRNA aminoacylation
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0097056	selenocysteinyl-tRNA(Sec) biosynthetic process
biological_process	GO:0009651	response to salt stress
biological_process	GO:0009165	nucleotide biosynthetic process
biological_process	GO:0006499	N-terminal protein myristoylation
biological_process	GO:0006563	L-serine metabolic process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006544	glycine metabolic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006413	translational initiation
biological_process	GO:0010206	photosystem II repair
biological_process	GO:0006536	glutamate metabolic process
biological_process	GO:0006164	purine nucleotide biosynthetic process
biological_process	GO:0009933	meristem structural organization
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0010220	positive regulation of vernalization response
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0035246	peptidyl-arginine N-methylation
biological_process	GO:0050826	response to freezing
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0010074	maintenance of meristem identity
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0019915	lipid storage
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0009845	seed germination
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0034969	histone arginine methylation
biological_process	GO:0048449	floral organ formation
biological_process	GO:0009560	embryo sac egg cell differentiation
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005732	small nucleolar ribonucleoprotein complex
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0009533	chloroplast stromal thylakoid
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005622	intracellular
cellular_component	GO:0016459	myosin complex
cellular_component	GO:0005618	cell wall
cellular_component	GO:0032991	protein-containing complex
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005634	nucleus
cellular_component	GO:0015030	Cajal body
cellular_component	GO:0072588	box H/ACA RNP complex
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005741	mitochondrial outer membrane
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0030515	snoRNA binding
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity
molecular_function	GO:0004525	ribonuclease III activity
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0004828	serine-tRNA ligase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008469	histone-arginine N-methyltransferase activity
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0004066	asparagine synthase (glutamine-hydrolyzing) activity
molecular_function	GO:0003922	GMP synthase (glutamine-hydrolyzing) activity
molecular_function	GO:0016462	pyrophosphatase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0008097	5S rRNA binding
molecular_function	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity
molecular_function	GO:0016905	myosin heavy chain kinase activity
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0004177	aminopeptidase activity
molecular_function	GO:0008235	metalloexopeptidase activity
molecular_function	GO:0004550	nucleoside diphosphate kinase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0042393	histone binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo05275	0.82	Barchart \| Table
Spo02189	0.80	Barchart \| Table
Spo01262	0.80	Barchart \| Table
Spo17929	0.80	Barchart \| Table
Spo02011	0.79	Barchart \| Table
Spo20161	0.79	Barchart \| Table
Spo00170	0.79	Barchart \| Table
Spo23193	0.78	Barchart \| Table
Spo00780	0.78	Barchart \| Table
Spo26636	0.77	Barchart \| Table
Spo10518	0.77	Barchart \| Table
Spo23922	0.76	Barchart \| Table
Spo06094	0.76	Barchart \| Table
Spo17271	0.76	Barchart \| Table
Spo17017	0.76	Barchart \| Table
Spo19207	0.75	Barchart \| Table
Spo25523	0.75	Barchart \| Table
Spo00504	0.74	Barchart \| Table
Spo17496	0.74	Barchart \| Table
Spo12304	0.74	Barchart \| Table
Spo17219	0.74	Barchart \| Table
Spo16033	0.74	Barchart \| Table
Spo18647	0.73	Barchart \| Table
Spo02534	0.73	Barchart \| Table
Spo03708	0.73	Barchart \| Table
Spo05547	0.73	Barchart \| Table
Spo26249	0.73	Barchart \| Table
Spo06501	0.73	Barchart \| Table
Spo12071	0.73	Barchart \| Table
Spo13048	0.73	Barchart \| Table
Spo13731	0.73	Barchart \| Table
Spo12598	0.72	Barchart \| Table
Spo20789	0.72	Barchart \| Table
Spo03675	0.72	Barchart \| Table
Spo19345	0.72	Barchart \| Table
Spo20141	0.72	Barchart \| Table
Spo19401	0.72	Barchart \| Table
Spo07794	0.72	Barchart \| Table
Spo27223	0.72	Barchart \| Table
Spo15363	0.71	Barchart \| Table
Spo11026	0.71	Barchart \| Table
Spo18304	0.71	Barchart \| Table
Spo17109	0.71	Barchart \| Table
Spo12391	0.71	Barchart \| Table
Spo20614	0.71	Barchart \| Table
Spo22307	0.71	Barchart \| Table
Spo18620	0.71	Barchart \| Table
Spo20376	0.71	Barchart \| Table
Spo15583	0.71	Barchart \| Table
Spo11943	0.70	Barchart \| Table
Spo05607	0.70	Barchart \| Table
Spo06172	0.70	Barchart \| Table
Spo22310	0.70	Barchart \| Table
Spo02181	0.70	Barchart \| Table
Spo13707	0.70	Barchart \| Table
Spo25915	0.69	Barchart \| Table
Spo08488	0.69	Barchart \| Table
Spo05555	0.69	Barchart \| Table
Spo11870	0.69	Barchart \| Table
Spo02706	0.69	Barchart \| Table
Spo19325	0.69	Barchart \| Table
Spo02218	0.69	Barchart \| Table
Spo15751	0.69	Barchart \| Table
Spo19761	0.69	Barchart \| Table
Spo06168	0.69	Barchart \| Table
Spo05638	0.69	Barchart \| Table
Spo17135	0.68	Barchart \| Table
Spo02001	0.68	Barchart \| Table
Spo05210	0.68	Barchart \| Table
Spo06115	0.68	Barchart \| Table
Spo07677	0.68	Barchart \| Table
Spo10024	0.68	Barchart \| Table
Spo12809	0.68	Barchart \| Table
Spo22809	0.68	Barchart \| Table
Spo23498	0.68	Barchart \| Table
Spo12874	0.67	Barchart \| Table
Spo05783	0.67	Barchart \| Table
Spo08816	0.67	Barchart \| Table
Spo22520	0.67	Barchart \| Table
Spo16351	0.67	Barchart \| Table
Spo07402	0.67	Barchart \| Table
Spo01096	0.67	Barchart \| Table
Spo05863	0.67	Barchart \| Table
Spo17575	0.67	Barchart \| Table
Spo18393	0.67	Barchart \| Table
Spo25669	0.67	Barchart \| Table
Spo13732	0.67	Barchart \| Table
Spo17110	0.67	Barchart \| Table
Spo12926	0.67	Barchart \| Table
Spo18434	0.66	Barchart \| Table
Spo17124	0.66	Barchart \| Table
Spo17114	0.66	Barchart \| Table
Spo16749	0.66	Barchart \| Table
Spo15604	0.66	Barchart \| Table
Spo14063	0.66	Barchart \| Table
Spo20488	0.66	Barchart \| Table
Spo09353	0.66	Barchart \| Table
Spo26803	0.66	Barchart \| Table
Spo06997	0.66	Barchart \| Table
Spo24703	0.66	Barchart \| Table
Spo06136	0.66	Barchart \| Table
Spo25176	0.65	Barchart \| Table
Spo23513	0.65	Barchart \| Table
Spo18908	0.65	Barchart \| Table
Spo03979	0.65	Barchart \| Table
Spo00081	0.65	Barchart \| Table
Spo18598	0.65	Barchart \| Table