Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTGTGAGATTGGTGACCACAAAAACAAGAAAAAAAGAAGAGCGCACCCCTTATTATTATTCGTGGCTTCAAAGGACACGAAACATAACCTTATCATCAACCAAAAAGAGCGCACCCCTTATTTCCTACTCTATTCAGCTGGAATAAGTTACAGTGATAATAATATTATTAGGATTGAAGTTAAGCAGAAATGGGTGCGATAAAACTATTGGAATTAGCTCTGTTTTTGAACCTGTTTTCAAACCCTGCATTATTTTCTGGGAAAGAAAAACCTCAATCATTTCCACCATCATGTAATCGAATCGAATGCCCGAGTTATGATTTGATAGAGGAAGGAAATGGGTTTGAAATCCGTCGTTATAATTCATCAGTTTGGGCGTCTACTTCCAAAATTGATGACATCTCTCTTGTTCAGGCTACCCGTACTGGCTTCTTGCAGTAAGTTTTACTCCGTTTTTTTTCTTTTTTTTTTAATTTATTATTTTATATAGTCATTGTTGATAAATATGTTTGCACTTGTTTGAAATGGGAAAAGAACATAAATGACATTATTATTGTGATGGGGTGTTTGTTTTGTTTAGAGGTGTAAGAAAGGGGTAAAGGGATGGGTAATCTAATCCTAGAATGACATTTCTCTTGTTTGTTCAGACTTCAGAGGGTATGAGATTATTTGTACAACACGTAGGAGATACATTATACTCCTTTTATTCCCCCCAAAATATTTCCCTTGGGGTAGCAGATGTTTACGGTTTGAACAATGTGACAATTGATTTCGAAAGAAAAAAATAAAAATAAAAAATAAATAAATACTCCCTCCGTCCCAGGTTAGTTGTTACACTTACCTTTGCACAAAGTTTTAGGTGATAAGTGGTTGTTTGGTTATCAATTGTTATTTTATTGAAAAAGTAGATGTGATAGGAGTTAGTGGGTATTTTTTTAATTGAATGAGAGAGGATGTGGGTACAAAAATAAATTTAGTGGGAAGAGAGAGACAATATAATAATTGTGGGGTCATTCCTTATTTAGAAGTGTAACAACTAATCTGGGACGGACGAAAAAGAAAAGTGTAACAACTAATCTGGAACGGAGGGAGTAATTAGTAAAACATACGAAGTATTTTGTAGTTTCATTCAATAAATTTATGGGTAGTAACGATCTAACCTAATGTTTGTTTCGTTTTCGGTATGATGTATGAGTTTAGAATGAGTAAAGCTAATACCTAGTGCTTGTTTAAGAAATTTAGGTCCGGTTCTTCTGAACCTTTTTTTTTTTGAACTGAGTGAACTGAAGTGAATTGAATTAATTAAGTTAAAAAAATATAGGGTCTTACTAGTATTTATGCATGGGATGAGCGCGTGATATACTTTATATAAATATTGTATTTCTTTAAAACAAAGGTCATATGAACTTATCAAAAAAAATATGGAAAATATAGTTGCTTAGACAATTGATATTGATCATTCAATTGATCATTCATTTGATAATTTTCAACTTTTGGATTGATCATTCATTTGATATTATACATCTTTGAAAATTTAGCTATATTTATCAATTATGGTTATGTTTTGGGTAGGCTATTCAACTATATTCAAGGGAAAAACGACGACAAGAAAAAAATAGAGATGACAGCACCAGTGATCACCCAAGTCTCCCCTAGTGATGGACCTTTATGTGAATCTTCATTTGTGGTGAGCTTCTATGTTCCAAAGGAGAACCAGGCAAACCCACCATCTTCCAAAGGGCTGCACATCCAGAAGTGGGAACCAACTTATGTTGCAGTCAGACAGTTCGGGGGTTTTGTCTCTGACTATGCAGTTGGAGAGGAAGCTGCGATATTGCAGAGCAGCCTTGCAGGGTCGAAATGGGCAGCTGCCATCGAAAAGAGCCAAAAAGATAATCCCAAGACGAGTTACACCGTTGCTGGCTATAATTCTCCATTTGAAATTTTCAATAGGGTGAATGAGATATGGTTTAATTTTGACATGGACAATGTTGCTGATATGTGAATGTGGTGATCGTTGTAGCTACAACAAAACCGGGCTCTGTAACACTCAAATTAATACTCTTATATGAGAATTACCTTCTGATGTCTTCATCTGCTTGCTGCTTTTAAGCTTCTGTAGTATACTACAACGCACTAGATTTTCTTTCGTCCATAATTCAGTTCAATTGTTCAACTTGTTCCCCCCAACCCCCGTGTTTAGCTTAAGTAACTTGCGTTCAAACTTCTCAAGTTTCTCATGGGACTCAACTCAGGTTATGACCGTACCTTAAGTTGGTTGTATGTTGGATTTGTTATAGTCGGTTTCTAGGTAACCCCCCTAACAAAACAGTTTGACTTCTCATAACTTGCGAATCTGCGATAGTGAGCAATATCAGTCGTAGATTTATTATGATTCTGAATGTACATTTGTTGGACATTTTTATGGTTATAAATTTATAATATCAATGGTTTCTGAC GTTGTGAGATTGGTGACCACAAAAACAAGAAAAAAAGAAGAGCGCACCCCTTATTATTATTCGTGGCTTCAAAGGACACGAAACATAACCTTATCATCAACCAAAAAGAGCGCACCCCTTATTTCCTACTCTATTCAGCTGGAATAAGTTACAGTGATAATAATATTATTAGGATTGAAGTTAAGCAGAAATGGGTGCGATAAAACTATTGGAATTAGCTCTGTTTTTGAACCTGTTTTCAAACCCTGCATTATTTTCTGGGAAAGAAAAACCTCAATCATTTCCACCATCATGTAATCGAATCGAATGCCCGAGTTATGATTTGATAGAGGAAGGAAATGGGTTTGAAATCCGTCGTTATAATTCATCAGTTTGGGCGTCTACTTCCAAAATTGATGACATCTCTCTTGTTCAGGCTACCCGTACTGGCTTCTTGCAGCTATTCAACTATATTCAAGGGAAAAACGACGACAAGAAAAAAATAGAGATGACAGCACCAGTGATCACCCAAGTCTCCCCTAGTGATGGACCTTTATGTGAATCTTCATTTGTGGTGAGCTTCTATGTTCCAAAGGAGAACCAGGCAAACCCACCATCTTCCAAAGGGCTGCACATCCAGAAGTGGGAACCAACTTATGTTGCAGTCAGACAGTTCGGGGGTTTTGTCTCTGACTATGCAGTTGGAGAGGAAGCTGCGATATTGCAGAGCAGCCTTGCAGGGTCGAAATGGGCAGCTGCCATCGAAAAGAGCCAAAAAGATAATCCCAAGACGAGTTACACCGTTGCTGGCTATAATTCTCCATTTGAAATTTTCAATAGGGTGAATGAGATATGGTTTAATTTTGACATGGACAATGTTGCTGATATGTGAATGTGGTGATCGTTGTAGCTACAACAAAACCGGGCTCTGTAACACTCAAATTAATACTCTTATATGAGAATTACCTTCTGATGTCTTCATCTGCTTGCTGCTTTTAAGCTTCTGTAGTATACTACAACGCACTAGATTTTCTTTCGTCCATAATTCAGTTCAATTGTTCAACTTGTTCCCCCCAACCCCCGTGTTTAGCTTAAGTAACTTGCGTTCAAACTTCTCAAGTTTCTCATGGGACTCAACTCAGGTTATGACCGTACCTTAAGTTGGTTGTATGTTGGATTTGTTATAGTCGGTTTCTAGGTAACCCCCCTAACAAAACAGTTTGACTTCTCATAACTTGCGAATCTGCGATAGTGAGCAATATCAGTCGTAGATTTATTATGATTCTGAATGTACATTTGTTGGACATTTTTATGGTTATAAATTTATAATATCAATGGTTTCTGAC ATGGGTGCGATAAAACTATTGGAATTAGCTCTGTTTTTGAACCTGTTTTCAAACCCTGCATTATTTTCTGGGAAAGAAAAACCTCAATCATTTCCACCATCATGTAATCGAATCGAATGCCCGAGTTATGATTTGATAGAGGAAGGAAATGGGTTTGAAATCCGTCGTTATAATTCATCAGTTTGGGCGTCTACTTCCAAAATTGATGACATCTCTCTTGTTCAGGCTACCCGTACTGGCTTCTTGCAGCTATTCAACTATATTCAAGGGAAAAACGACGACAAGAAAAAAATAGAGATGACAGCACCAGTGATCACCCAAGTCTCCCCTAGTGATGGACCTTTATGTGAATCTTCATTTGTGGTGAGCTTCTATGTTCCAAAGGAGAACCAGGCAAACCCACCATCTTCCAAAGGGCTGCACATCCAGAAGTGGGAACCAACTTATGTTGCAGTCAGACAGTTCGGGGGTTTTGTCTCTGACTATGCAGTTGGAGAGGAAGCTGCGATATTGCAGAGCAGCCTTGCAGGGTCGAAATGGGCAGCTGCCATCGAAAAGAGCCAAAAAGATAATCCCAAGACGAGTTACACCGTTGCTGGCTATAATTCTCCATTTGAAATTTTCAATAGGGTGAATGAGATATGGTTTAATTTTGACATGGACAATGTTGCTGATATGTGA MGAIKLLELALFLNLFSNPALFSGKEKPQSFPPSCNRIECPSYDLIEEGNGFEIRRYNSSVWASTSKIDDISLVQATRTGFLQLFNYIQGKNDDKKKIEMTAPVITQVSPSDGPLCESSFVVSFYVPKENQANPPSSKGLHIQKWEPTYVAVRQFGGFVSDYAVGEEAAILQSSLAGSKWAAAIEKSQKDNPKTSYTVAGYNSPFEIFNRVNEIWFNFDMDNVADM Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo19862.1 vs. NCBI nr
Match: gi|902231507|gb|KNA22285.1| (hypothetical protein SOVF_034180 [Spinacia oleracea]) HSP 1 Score: 458.8 bits (1179), Expect = 5.700e-126 Identity = 225/226 (99.56%), Postives = 225/226 (99.56%), Query Frame = 1
BLAST of Spo19862.1 vs. NCBI nr
Match: gi|731365519|ref|XP_010694569.1| (PREDICTED: heme-binding protein 2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 366.7 bits (940), Expect = 2.900e-98 Identity = 178/226 (78.76%), Postives = 201/226 (88.94%), Query Frame = 1
BLAST of Spo19862.1 vs. NCBI nr
Match: gi|147832981|emb|CAN68405.1| (hypothetical protein VITISV_035042 [Vitis vinifera]) HSP 1 Score: 317.0 bits (811), Expect = 2.700e-83 Identity = 153/222 (68.92%), Postives = 182/222 (81.98%), Query Frame = 1
BLAST of Spo19862.1 vs. NCBI nr
Match: gi|225470739|ref|XP_002266519.1| (PREDICTED: heme-binding protein 2 [Vitis vinifera]) HSP 1 Score: 313.2 bits (801), Expect = 3.800e-82 Identity = 151/222 (68.02%), Postives = 180/222 (81.08%), Query Frame = 1
BLAST of Spo19862.1 vs. NCBI nr
Match: gi|703085370|ref|XP_010092719.1| (hypothetical protein L484_024614 [Morus notabilis]) HSP 1 Score: 303.1 bits (775), Expect = 4.000e-79 Identity = 150/224 (66.96%), Postives = 180/224 (80.36%), Query Frame = 1
BLAST of Spo19862.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RRW3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_034180 PE=4 SV=1) HSP 1 Score: 458.8 bits (1179), Expect = 3.900e-126 Identity = 225/226 (99.56%), Postives = 225/226 (99.56%), Query Frame = 1
BLAST of Spo19862.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E522_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g094190 PE=4 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 2.000e-98 Identity = 178/226 (78.76%), Postives = 201/226 (88.94%), Query Frame = 1
BLAST of Spo19862.1 vs. UniProtKB/TrEMBL
Match: A5BXB9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035042 PE=4 SV=1) HSP 1 Score: 317.0 bits (811), Expect = 1.900e-83 Identity = 153/222 (68.92%), Postives = 182/222 (81.98%), Query Frame = 1
BLAST of Spo19862.1 vs. UniProtKB/TrEMBL
Match: F6HRG1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0140g00210 PE=4 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 2.700e-82 Identity = 151/222 (68.02%), Postives = 180/222 (81.08%), Query Frame = 1
BLAST of Spo19862.1 vs. UniProtKB/TrEMBL
Match: W9QRN0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024614 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 2.800e-79 Identity = 150/224 (66.96%), Postives = 180/224 (80.36%), Query Frame = 1
BLAST of Spo19862.1 vs. ExPASy Swiss-Prot
Match: HEBP2_HUMAN (Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE=1 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 4.800e-24 Identity = 69/184 (37.50%), Postives = 96/184 (52.17%), Query Frame = 1
BLAST of Spo19862.1 vs. ExPASy Swiss-Prot
Match: HEBP2_MOUSE (Heme-binding protein 2 OS=Mus musculus GN=Hebp2 PE=1 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 4.800e-24 Identity = 67/184 (36.41%), Postives = 98/184 (53.26%), Query Frame = 1
BLAST of Spo19862.1 vs. ExPASy Swiss-Prot
Match: HEBP1_PIG (Heme-binding protein 1 OS=Sus scrofa GN=HEBP1 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 3.500e-11 Identity = 47/154 (30.52%), Postives = 73/154 (47.40%), Query Frame = 1
BLAST of Spo19862.1 vs. ExPASy Swiss-Prot
Match: HBPL1_ARATH (Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana GN=At3g10130 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 4.100e-7 Identity = 60/237 (25.32%), Postives = 100/237 (42.19%), Query Frame = 1
BLAST of Spo19862.1 vs. TAIR (Arabidopsis)
Match: AT1G17100.1 (SOUL heme-binding family protein) HSP 1 Score: 276.2 bits (705), Expect = 1.800e-74 Identity = 139/223 (62.33%), Postives = 164/223 (73.54%), Query Frame = 1
BLAST of Spo19862.1 vs. TAIR (Arabidopsis)
Match: AT1G78450.1 (SOUL heme-binding family protein) HSP 1 Score: 203.4 bits (516), Expect = 1.500e-52 Identity = 102/223 (45.74%), Postives = 148/223 (66.37%), Query Frame = 1
BLAST of Spo19862.1 vs. TAIR (Arabidopsis)
Match: AT1G78460.1 (SOUL heme-binding family protein) HSP 1 Score: 172.6 bits (436), Expect = 2.900e-43 Identity = 91/190 (47.89%), Postives = 120/190 (63.16%), Query Frame = 1
BLAST of Spo19862.1 vs. TAIR (Arabidopsis)
Match: AT3G10130.1 (SOUL heme-binding family protein) HSP 1 Score: 56.6 bits (135), Expect = 2.300e-8 Identity = 60/237 (25.32%), Postives = 100/237 (42.19%), Query Frame = 1
BLAST of Spo19862.1 vs. TAIR (Arabidopsis)
Match: AT5G20140.2 (SOUL heme-binding family protein) HSP 1 Score: 55.1 bits (131), Expect = 6.600e-8 Identity = 48/188 (25.53%), Postives = 82/188 (43.62%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo19862.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo19862.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo19862.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 4
BLAST of Spo19862.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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