Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACGAATTTTGCTTTCTTAAAATCTAACAAAATGTTGACATCACCCCTGACGTCAGCCTAAAACACATCTACCAAGTACCAATCAATTAGCATGCATAATCTCGATATTTCCACACATTCATCCACATTCATATCAGCCAGCCACTCTATAAATACCCTCCTCCCCCACCATAACCCAAAGTATATAACTCCACCCTTTTAATAAACCCTTTTCTTCGTTACTTACAAGAAGCTTGAAAAATGGCAAATGAATTAGTGTTGTTGGATTTCTGGGAAAGCCCATTTGGGATGAGAGTGAGAATAGCATTGGCTGAGAAGGAGGTAGAATATGAATACAGAGATGAAGATTTGAAGAACAAGAGTGAATTTCTTCTTAAGATGAACCCGGTTCATAAGAAAATCCCGGTTCTCGTCCACAATAACAAACCGATTAACGAGTCTTTAATTATTGTGCAGTACATTGATGAGGTTTGGAGTGACAAGAAGCCTCTCTTGCCGTCTGATCCTCATCAGAGGGCTGTGGCTCGTTTCTGGGCTGATTTTGTTGACAAAAAGGTATTTTTAATTTCCTTTTTTCTTATTCATTTCATGCACTTTTAATTTATTTATTTCCCTTTTTTTTTTCTGTTAGGTTTTTATAATTATCTTTGACCTATTTCTGTTTTAAAAGTTGAGTACTCTGTATTATTTTACAGGTCTTGCGCGCACAAGGTGTACAATAAATTTATTGTACACCAAGATAACTTTTACTCATTTTTTTTGTAACTTTAACCTGGTTTTTATTAACTTTTATATTAGTAAAAAAAATTGATAGATAAATATTTTAAATGGTTAAATGATTAATTTTATAAATTATTAGTGAATTTGAAAAAAATAAGTTTTATTAAAATGAAAAAAATTCATTTAAAAATAGATAACTTTTACATATATATATAAGCTTAACTTTTAAGCATTTTGAGTTAACTTTTACTCCGGTGTACATTATTTATTGTGCAACCTTTGTAAATAAGAATTTGTGATTACCTTTTGGTTCTATTTTTAGAGCAGCACCAGCCACATCAGTGAGGAAATTAACTTCTTTTTATGGAAAAATAGGGTCCACGATTTCGGACAATGAATAAAACACAAAACGTTCACGAGTAAATTTGGTTTGTTTGTTTAAGTTGCAAATTAACTAAGAATGTTTATTCCGGATTCGGAAATGACATGCGACCTTTAAGCCGTGTCACAGTGATGACACGGCAAGCCTACGTGTCATAAATATATTTGGATATTAAAATATTTCGATTATTATAACCTATTATACATGTTACAAAAAAGGTAGGAAAATCTTAATATTCTATTTTACAAATTGAGTAATGTACTCCCTCCGTTTCTTTTTGTTGTATCCATTTCCATTTTAAGCGTTTCATATTGTTGTATCAATTTAGAATCTATTCTATTTTTGGACATACATTTTATCCTAAAATACCCTTACATTTCTATCTAATTACCAAAATACCTAAAGATTATACCCATATTTCCACCTAATTTTCCCCACCCATAATATTTAATTCTTTTCCCTTCCCCATATACCCACTCTCTCACCTCCTTTATCACCCATCATTATCACTCATCTCTTTTACCTTATTTCTTTATTGTTTTCTCACTCCTTTATTTATTATAATCTCTTACACCCAATCATTACACTTATACCCATACAAACCAATATTCCAATTTTCTTAAAAACCACACCAGATTCCAAATGGATACATCAAAAAGAAATGAATGGAGTAATTTCTTATTCTAGAAAAATAATTCTAATTTGTATAGAAAATTAGAAAAAAATAATTTTAATTATTTATATGATATAGGAAATTAAAATAAAAAATGCATTTACTATTTTGAACTTGGAAAATAAAAAATACAGTATATTAGAAAGTAGAAGATTAGAAAAAGGCATTTAGTCTTAATTTGGTATATTGGGTTTGTTCTACGTACCCTGGACCGCCAACATAATTGCTCGTTTATCAAGTCCATGACTCAATTTCTTGCGTTAAGTCTATGACCCAATTCCAAATTAAAATAATATTTTAAAGTAATATATAATCATGAATTTTTATTTACCTAAAATATATTATTAAGTTATAAATTAGTGCAATTTTAAATTAAATTGATGTTTTTTTTTAATTACACAAAAAATATATTATTAGATTATAAATTTTATTTTTTTAATTTGTAATTTATAAAATAAAAGGAAATATATATCTACTGTAAATATAATAAATATTTGTTTACTTATTTGTATCGACTACCTTATTTATATAGTTTCATAGTAAAAATATGGAATTGATAGTAAAAAAAAAAAAATTAATGACGCGTAGCTTACGTGGCGCCTATATGTACCAATAAAACGCCGACACGTAAAATTGCGACAATATTTTTTTGTCGCAACTTGCGACCTATATCATCGTCCTTCCGGATTAACTCGTACTCGTAAAAGTGTGTAACAAAAGTTTTTGTTACCTAAGGTGATATTTCGGTATAGAAATACTCTTCCCATGCATTCTATTTGAATATAGAAATGACTAGGTAGATCTAAATGCCAAGATGTTTTTTTTATGTTTCAAAAATACATACAAAAAGTCAATAACCTAAGTTTAGTAATGACTTTAAATAAGGGCTACCTAAGTTTAATTCACAACGAAAATTGGTTACAACAAGTTCAATAAATTATTAAATTGCTTCCCTCAATTTTTTTTTTATTAAATTGCTCATACAAAGGTGTACAATTTATTATATTTACAATAAATTAGAATATTATGATTTCCTACCTTTTATGTAACATGTATAATATGTTAGATAAGTTAAATATTTTAGTTTTCAATTACGTTCATGATTCATGACATATAAGCATGTCATGTCATGTCATGTCAATGATTATGACACGACTTAGATTTGTATAGACAGAGTGTGGATGTTGTTTTGAATTGCTAGAATTAATCTGGTAAGTAATATAACCCTGATTTGACGCTATACTTGTACAGATATATGACAGTGGAAGAAAAGTTTGGACTAGCAAAGACGCAGAACAAGAAGCAGCGAAGAAAGAATTCATAGAGAACTTGAAGGTGATGGAAGCTGAGCTGGGTGATAAAGCTTACTTTGGAGGAAATACATTTGGATATGTTGATGTTGCTTTCATTCCATTTTACAGTGAGTTTTATGCGTACGAGAAGTTGGGAAACTTCAGCATTGAGGAGTCTTGCCCAAAGATCATTGAATGGGCCAAGAGATGTTTGCAGAGAGAGACTGTTGCCAAAGCACTCCCTGATCAGAACAAAGTTTACGACTTTATTCTCATGCTTAAGAAGGCGTATGGCCTTTAAATATAGAAACCCATCAACGTACTCTTGCTAACTTTTGTTGGGTCTTGTTGTGTTAGCCTGGGATCATGTATGTTCTTTTAATAAATCCAACATGTTAAGGCACAAATGATAATACACTAAGTCAATGAGCAACATGTTGACTTTAGTCAGTTGGTTAGTTACAAAGTTTGTTAAGCTGTTATAACAAACTTGATGACATGGCATTGCATTGTATAAATTCGATATTGCATTGTATAAATACTGTTTTAGCTGATTGTGATCAGTTATCAAAAAACAAAATAAAATCCTAATTCCTATCTTCTCTCTCTAAT AACGAATTTTGCTTTCTTAAAATCTAACAAAATGTTGACATCACCCCTGACGTCAGCCTAAAACACATCTACCAAGTACCAATCAATTAGCATGCATAATCTCGATATTTCCACACATTCATCCACATTCATATCAGCCAGCCACTCTATAAATACCCTCCTCCCCCACCATAACCCAAAGTATATAACTCCACCCTTTTAATAAACCCTTTTCTTCGTTACTTACAAGAAGCTTGAAAAATGGCAAATGAATTAGTGTTGTTGGATTTCTGGGAAAGCCCATTTGGGATGAGAGTGAGAATAGCATTGGCTGAGAAGGAGGTAGAATATGAATACAGAGATGAAGATTTGAAGAACAAGAGTGAATTTCTTCTTAAGATGAACCCGGTTCATAAGAAAATCCCGGTTCTCGTCCACAATAACAAACCGATTAACGAGTCTTTAATTATTGTGCAGTACATTGATGAGGTTTGGAGTGACAAGAAGCCTCTCTTGCCGTCTGATCCTCATCAGAGGGCTGTGGCTCGTTTCTGGGCTGATTTTGTTGACAAAAAGATATATGACAGTGGAAGAAAAGTTTGGACTAGCAAAGACGCAGAACAAGAAGCAGCGAAGAAAGAATTCATAGAGAACTTGAAGGTGATGGAAGCTGAGCTGGGTGATAAAGCTTACTTTGGAGGAAATACATTTGGATATGTTGATGTTGCTTTCATTCCATTTTACAGTGAGTTTTATGCGTACGAGAAGTTGGGAAACTTCAGCATTGAGGAGTCTTGCCCAAAGATCATTGAATGGGCCAAGAGATGTTTGCAGAGAGAGACTGTTGCCAAAGCACTCCCTGATCAGAACAAAGTTTACGACTTTATTCTCATGCTTAAGAAGGCGTATGGCCTTTAAATATAGAAACCCATCAACGTACTCTTGCTAACTTTTGTTGGGTCTTGTTGTGTTAGCCTGGGATCATGTATGTTCTTTTAATAAATCCAACATGTTAAGGCACAAATGATAATACACTAAGTCAATGAGCAACATGTTGACTTTAGTCAGTTGGTTAGTTACAAAGTTTGTTAAGCTGTTATAACAAACTTGATGACATGGCATTGCATTGTATAAATTCGATATTGCATTGTATAAATACTGTTTTAGCTGATTGTGATCAGTTATCAAAAAACAAAATAAAATCCTAATTCCTATCTTCTCTCTCTAAT ATGGCAAATGAATTAGTGTTGTTGGATTTCTGGGAAAGCCCATTTGGGATGAGAGTGAGAATAGCATTGGCTGAGAAGGAGGTAGAATATGAATACAGAGATGAAGATTTGAAGAACAAGAGTGAATTTCTTCTTAAGATGAACCCGGTTCATAAGAAAATCCCGGTTCTCGTCCACAATAACAAACCGATTAACGAGTCTTTAATTATTGTGCAGTACATTGATGAGGTTTGGAGTGACAAGAAGCCTCTCTTGCCGTCTGATCCTCATCAGAGGGCTGTGGCTCGTTTCTGGGCTGATTTTGTTGACAAAAAGATATATGACAGTGGAAGAAAAGTTTGGACTAGCAAAGACGCAGAACAAGAAGCAGCGAAGAAAGAATTCATAGAGAACTTGAAGGTGATGGAAGCTGAGCTGGGTGATAAAGCTTACTTTGGAGGAAATACATTTGGATATGTTGATGTTGCTTTCATTCCATTTTACAGTGAGTTTTATGCGTACGAGAAGTTGGGAAACTTCAGCATTGAGGAGTCTTGCCCAAAGATCATTGAATGGGCCAAGAGATGTTTGCAGAGAGAGACTGTTGCCAAAGCACTCCCTGATCAGAACAAAGTTTACGACTTTATTCTCATGCTTAAGAAGGCGTATGGCCTTTAA MANELVLLDFWESPFGMRVRIALAEKEVEYEYRDEDLKNKSEFLLKMNPVHKKIPVLVHNNKPINESLIIVQYIDEVWSDKKPLLPSDPHQRAVARFWADFVDKKIYDSGRKVWTSKDAEQEAAKKEFIENLKVMEAELGDKAYFGGNTFGYVDVAFIPFYSEFYAYEKLGNFSIEESCPKIIEWAKRCLQRETVAKALPDQNKVYDFILMLKKAYGL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo19918.1 vs. NCBI nr
Match: gi|902229205|gb|KNA21418.1| (hypothetical protein SOVF_043270 [Spinacia oleracea]) HSP 1 Score: 444.9 bits (1143), Expect = 8.100e-122 Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 1
BLAST of Spo19918.1 vs. NCBI nr
Match: gi|731365988|ref|XP_010694823.1| (PREDICTED: probable glutathione S-transferase [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 364.4 bits (934), Expect = 1.400e-97 Identity = 171/218 (78.44%), Postives = 199/218 (91.28%), Query Frame = 1
BLAST of Spo19918.1 vs. NCBI nr
Match: gi|802708516|ref|XP_012084509.1| (PREDICTED: probable glutathione S-transferase parC [Jatropha curcas]) HSP 1 Score: 352.1 bits (902), Expect = 7.200e-94 Identity = 163/218 (74.77%), Postives = 187/218 (85.78%), Query Frame = 1
BLAST of Spo19918.1 vs. NCBI nr
Match: gi|731366007|ref|XP_010694833.1| (PREDICTED: probable glutathione S-transferase [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 347.8 bits (891), Expect = 1.400e-92 Identity = 166/218 (76.15%), Postives = 191/218 (87.61%), Query Frame = 1
BLAST of Spo19918.1 vs. NCBI nr
Match: gi|720090548|ref|XP_010245130.1| (PREDICTED: probable glutathione S-transferase parC [Nelumbo nucifera]) HSP 1 Score: 345.9 bits (886), Expect = 5.200e-92 Identity = 158/218 (72.48%), Postives = 187/218 (85.78%), Query Frame = 1
BLAST of Spo19918.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RPL6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_043270 PE=4 SV=1) HSP 1 Score: 444.9 bits (1143), Expect = 5.700e-122 Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 1
BLAST of Spo19918.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E4L2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g095800 PE=4 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 9.800e-98 Identity = 171/218 (78.44%), Postives = 199/218 (91.28%), Query Frame = 1
BLAST of Spo19918.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E4L6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g095830 PE=4 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 9.400e-93 Identity = 166/218 (76.15%), Postives = 191/218 (87.61%), Query Frame = 1
BLAST of Spo19918.1 vs. UniProtKB/TrEMBL
Match: A0A067JXK7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25701 PE=4 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 8.000e-92 Identity = 159/217 (73.27%), Postives = 186/217 (85.71%), Query Frame = 1
BLAST of Spo19918.1 vs. UniProtKB/TrEMBL
Match: W6ACL7_9ERIC (Glutathione S-transferase OS=Camellia japonica PE=2 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 1.000e-91 Identity = 159/219 (72.60%), Postives = 188/219 (85.84%), Query Frame = 1
BLAST of Spo19918.1 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 1.500e-86 Identity = 149/220 (67.73%), Postives = 185/220 (84.09%), Query Frame = 1
BLAST of Spo19918.1 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 9.400e-86 Identity = 148/220 (67.27%), Postives = 183/220 (83.18%), Query Frame = 1
BLAST of Spo19918.1 vs. ExPASy Swiss-Prot
Match: GSTUJ_ARATH (Glutathione S-transferase U19 OS=Arabidopsis thaliana GN=GSTU19 PE=1 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 1.000e-84 Identity = 146/216 (67.59%), Postives = 176/216 (81.48%), Query Frame = 1
BLAST of Spo19918.1 vs. ExPASy Swiss-Prot
Match: GSTUP_ARATH (Glutathione S-transferase U25 OS=Arabidopsis thaliana GN=GSTU25 PE=1 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 1.100e-81 Identity = 140/218 (64.22%), Postives = 172/218 (78.90%), Query Frame = 1
BLAST of Spo19918.1 vs. ExPASy Swiss-Prot
Match: GSTUM_ARATH (Glutathione S-transferase U22 OS=Arabidopsis thaliana GN=GSTU22 PE=1 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 3.200e-78 Identity = 135/216 (62.50%), Postives = 171/216 (79.17%), Query Frame = 1
BLAST of Spo19918.1 vs. TAIR (Arabidopsis)
Match: AT1G78380.1 (glutathione S-transferase TAU 19) HSP 1 Score: 314.3 bits (804), Expect = 5.900e-86 Identity = 146/216 (67.59%), Postives = 176/216 (81.48%), Query Frame = 1
BLAST of Spo19918.1 vs. TAIR (Arabidopsis)
Match: AT1G17180.1 (glutathione S-transferase TAU 25) HSP 1 Score: 304.3 bits (778), Expect = 6.100e-83 Identity = 140/218 (64.22%), Postives = 172/218 (78.90%), Query Frame = 1
BLAST of Spo19918.1 vs. TAIR (Arabidopsis)
Match: AT1G78340.1 (glutathione S-transferase TAU 22) HSP 1 Score: 292.7 bits (748), Expect = 1.800e-79 Identity = 135/216 (62.50%), Postives = 171/216 (79.17%), Query Frame = 1
BLAST of Spo19918.1 vs. TAIR (Arabidopsis)
Match: AT1G17170.1 (glutathione S-transferase TAU 24) HSP 1 Score: 290.8 bits (743), Expect = 6.900e-79 Identity = 139/218 (63.76%), Postives = 169/218 (77.52%), Query Frame = 1
BLAST of Spo19918.1 vs. TAIR (Arabidopsis)
Match: AT1G53680.1 (glutathione S-transferase TAU 28) HSP 1 Score: 290.0 bits (741), Expect = 1.200e-78 Identity = 133/218 (61.01%), Postives = 169/218 (77.52%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo19918.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo19918.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo19918.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo19918.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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