Spo20030 (gene)

Overview
NameSpo20030
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPlant tudor-like RNA-binding protein
LocationSpoScf_01803 : 105341 .. 112297 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCGTAAGCGGTAACCTATTCCTGAGCCCAAATCTGACTAATAAACCGACCTGTAATTACCTGGCTTTTTGTTAATTCCTGATTAAATCAGTCACTTCAAACTATAACCACTCACATTCGGAAATCTGAAATTATACAAACCCTAGTTTTAATTCGCAAAGCAACAAATTGCGTGTTCATTCAATCAATCGATCTGTAGTTCAACGACTTCTCGATTCCTTTTCAATTCTTTGTTAAAGGTATGCTTCTTTTCCAATTCATCGTCCCAATTTATTATTTCAGTTTGAGTTTCTGCAATTTTTTAGCTTCGATTCATCGTTATTCATTCATTGTAAATCTCGCGATTCATCGGCGTTTAATTTTTTTATTAGAAATTACATAAAAGTTCGTCAATTATTGGTACGTTTGTGCAGATTTACTTGCTTATCGATTCATGGATTTTTATTCCGATAATATCGAAAACCCTAATTTTTTTGATATCGCTGTGATGTTACTTTGATTTTAGCGTTGTTCTTGCTTGATGAATTGTGCTATTACTTTTGTTTCTCTGTACACGGGTGATGAATTCTGCGTTAACCCTAGTTACGAAGTCATTATTTCGTGTGTTTCTGTTTATTTTATTGATTGTTTGACGAATTGGAACTTCAATATGTTTTTCGCCTGCAATGTATGGGTTAATTTGTAGTCTTTCTTCGTCTAGGTTTTGTGTGAATTGTTTTCAGATAATTGACGGTTTCTGAGTTTGTATTCTTCATCTAAAATATTTGAATTACTGTTGTTATTTCTAATGTTTCAATGTATATAGTCAATGAATACATATTTCATTTGCTGATCCTTGTTGATTTTTTAGGTTTCTTTTGGTGATTTATCAATGACGAGGTTTAAGAAAGGAAGCATGGTGGAGGTCTTGTCCAAGAAAGACCTTTGGCGGTGTGCAAAAATCGTGGAGGACAATGGAGATGCTTACACAGTCAAATATTATCGTTGTCCAGGTATAGCTAAAGACGGTGTTGACAAGGTTTCAGCTAAAGCAGTCAGGCCTTGCCCAAGACCAGTGATGGGTACTAACAATTTGGTTGTTGGTAAAGTTGTGGAAGTATTAGATGATGGTTATTGGAGGGTTTCTGTGATTGAAGAGGTTCTGGAAGATGGTTATTGTTACATCAAGGTTATTGGATCTTTGGATGAGTTTAGAGTGAATAACTCTAGTATCAGAGCACGACAAGAATGGAAACAAAACAAGTGGATTCTGATGGATAAGGTACTCTAACGTCTCTTTATTTCTCAGTGGTGCTTAATACGTTATTCCAAAGTGGATTTTATATGCCTTGTTTGTTTATTGACATTGACACTAGTTTGCTTTAATCACAAATGTTTACTCCTGCTGTTTACTTTATATTATCAGTTTGGTTTTGGTTAGTGGGTAGTGGGTACTCAATACGTATTGCATATTTTTATTGTTTTCAAGTGTTGATCCTTGCCTATACAATTATATTTACCAGTTATGTTCAATGAATACAGGATTCTGAAAATCATGTGCACAACAAGTCCCAGCAGGAAGTTCTAGAATCCAATTTGCTTTCGAAGTCATTGAAGAGGTCATTTTCTGACCATTCATCCACTGCTGAAGCTTATGCTGAGTGTGTCCAGAAAAGAAGATTAGGAGACGAAGAGGTCGAGCTTGATGCCATAGATGGTGATGCATATTCCTTCAATGGAAAGGTAGACAACCCTGCTAACCAAAGGGGAAATCTTGGTAAAGATAATGTGCAAAATTTTACTGAGAAAACAATCAGATTTAATAAAGCTAACACCAGAAATCACAATGGTTTCTTGGGGCTAGATGATTGTGTCAGTAGTGTATCATCTGTTGGTAGTTGTAGCATCACTAATGCCATTTCTGATAGGTTGCTCAGCCACTCTTCAGCAGGAAGTAGACAGGATAGTGCTTCTCTTTGTAGTGATGCAGAGTCACATAGTCATTTGGGAGTGGAGGAAGAAATGTCTGATGGTCAGTCAGAAAGAGGAGATTGTGTAAGAACACATGAGTTAGATTTATATGGTTATCGATGCGTTTTAGAAACATTATATGCGTCTGGTCCCTTAAGTTGGCAACAAGAATTTGCTTTAACAAACCTCCGTATGAAACTTTTTGTTTCAAACGACGAACATTTGACAGAGCTGAGGAGGTTAAAGTCTCTTGGTTTGAGTTGTCACTAGCATTAGATGCTCTTTCTTATTTCATTGATTGCACTGGGTCCTGTAAATTCAGTTATGCCTTGTGCCTTGTAAGAAGTGGGTGACATTTGAAACTATACATGTGTTCCATTGTGAATGCAGTCATATGATTACTTAAAGAAAAATCATACATCAATTATCAATTTGGAAAGTACGATTTTTAGCCTCACTTATGTTTGTATATTCTGATATTTTTTTGTAGCTTTTGCAATGCAGCATAAGGAGATTCTAATGTTGCTCTTATGACCTTATCAAATTTGTTGCACATGTCTTGCCATTTAAACAGATATTGAGATAAAATTCTCTTTTATGTTTGTAAGCAACCCAGCATACTATGGTTTGAAACTTTACCTTGAATGAATGAATGAAAAATATTTTATATCAAAGGGTGCAGTAGTACTTGTCATATGCTGCTAACACTGTTGTCTTAAGACTTCTATGATTATTATTGATGCCTCTCGTACACTTTTCAGGACCTGTCCAGACATGTAAGCCTTACAGCCACAATCTTAAAGATGATGTTGTGGTTAGCCACCTCCTCTGTAATATTGAGAAAGGGGAATCATCTGCAATGGCTCCTTTATAATGAGGCAATTCATGTCGGACGCTGTGATTAATCTCTTTTTATGTTGTTTTATGTGCTTCTTCCAGGTAAACATGATTTTTTTGTTACATTACATGATGCTGAACAGTGCTTTTAGGGGCTGTGATCAATATGATTTTTAAGATCCTTTGTTGGGTTTTGGTTAGTTGGTGGCTGGTTTTTGAATGTCATGCATATATCTTCTAAAATGTAGAATAATTCATTGCGTTAAAAGTTTGAAGATTTTGACAAACTTTGCAACACATGACTAATAATTTAAAACCAAATGATAGTATGATCTGAACATAGTAAACTTAGCTAGAGGTTGTGCTTTACATTATTATTTATATAGTCGTTGTTCGTTGTTTTTGAAGGTCTTTGTTAGGCTAGGGTGAATATGTTCAAAGATGATATTTTTATATCTTCCGATAAGGGCCAATAAGATAATATATGATGCTCCGTAGAAGATAATACAATATAAGTTCAGGCCAATAAGATGGGGTTTATGTAGGGAATTAACCATTTAAAACTTGAAGATTGGGACTTGTGCCATCTTGTTTTAGGATACTGGACTGCACGTACCTCTGGATTTTGCTAATTGTGTTTGGTTTGACCCTTTTTTTACAATTTGTTATGTGCTACTTTCTCGCTCTTTCTGTTTTCATGTTGCTTTATTCAATTATGTTTGCCTTGCTAATAGTATCTGTTGGACAGTGGCACAGAAAACAGGATTTTGGTCCTATGTCTGAGCTAAGAAACTCCAGAGTGACTATGCAGTTTTTTGCATCCAAGTAATGGCCAATTCCCAATCAGGTCTTTCCATCTACTTATGGCCATGTAATCACATGTTTTCAGCTGGGTGTTGAGCTTTAGTTGTTCGTTATTCATATGCATGCCACTGAATTCAGATTTGTGCTGTGTAGTTCGGTTACTGCGAATTGACCGTGTTTTGGTTGGCGTAAACTCCAACTTTGTGTAATCAATATTGATAGTTTGTTGGGGGGGGACTTGTTCACTGACTTATACCCTTATGGTCAATATGAATGTCTGAAGGCTAAGAAAAACAGAGTTAACCCCATTATTAGGGTCTAAGTTTTACAAAAATTCACCAATTGGGACCTCACTTTTTATGGTCAATAATATTGGGACCTAAGGTTAGATTTCTTGTGTTTTAACTCGGCTTTAACAAAGGTTGGCTTCAAACTAATAAAATAAAGCGAAAATAAATTATAAGAGTTATGAGTTAATATTTAGTATTATTTGTCAACTTTTTTGTGGGTTTTATTGGGGTTTATTTTGTTTGTCTTTAGATTTGTGTTAATGGGTACTTATTAATTTTGTGATTTTTTGCGAGATTAGTGATTGAATTTGGTTAATTTTGTGGTTTTGTATGATACTAATGCTGCTAAATTTTATTGTTTTTGTGTTGATTTTGATTTCTATTTTTAGGCTGTGACTTATATACTCGTTTTCTTTTTATTTTTATTTTAAAAAAGGGGTCGGGTGTGGTTGAGTTATGCTAAATGGGGCATGACTGAATATGACCCGAACCTTTCATTTAAGTTTGGGTCCGACCCGCCCTTGACACGACCTATTTTATAGGTCTGTGTTAAAACGTTTTGGTTTTGTTGGGTTTCATGTTAAATTATGTGTATATTAGAAGTTAGTTACTTAACATTTTATGATCAAATTATCACTGAATTGTGAATTATAATGGAAGAAATTAGTGTAGTGTTGATACTTTACGTTGAAGTATGTTCAAGAAGGGGAAATTGGAGGAGTAAGAATAAGAAATAATTAATTAGTTTTGTACTTTTGCAAAAATAAAATGATACTATTATATTTCCTAACTCAAGTACTTAATATTTCTTTAACTACCATAGTTAACTTTGGCCATAAAAGTAAGACGAGGTTTCAATTATTTGTGATTTTTTGTAAAACTTTGACCCCAATTATGGGGTTAACTCAAGAAAAACATGGTAAAAAGTGTGTAAAGCTCTCAAATGTATGGGTTTCGGTTTTTGATGATAGTCTCCGTGAGCTGTAAAATAAAATCACCCTCTTAATTTGCTGTAGGGTCTCATATTTTTTGGGAGATGAGGATGATCATGTAAAGGTTCTAGACTAGCTTCTAGGCACAGTAGTTTGTAAATGTTAGGTTTAGGAAGAATGAAAAATCTGGGATTCATTGCTCTGTTGTTTACAGAAGCATGCAAGTTTTGTTACAGCAGCATGCCAGCTCTCTATCTTGAAGCTCTACATCTATATACTACGTACGTTACTAGTAGTTGTCTTGTTTCATTCTGGAGTCCTCTGCAGTGAATGTATCTGTACAGGATGTACGTGGTGATTCTTTCCCTTTGGTCTGATGATGACATAGGAAGTCAAATGCATGAGGGTTGATGGCAAAGCATATCAGAGAATAATACAGACTAGTAATTGGCTTTATTTTGTATATTTGGTTTAAGAAAATAATAATAACAACAATTCATTGTATTCTTTACTTTATTTTGGGTTATCCAATTTATATTTCTGTGGATTCTGCAAACATGTTATATCNAATTCATTGTATTCTTTACTTTATTTTGGGTTATCCAATTTATATTTCTGTGGATTCTGCAAACATGTTATATCTTCTCCGGGTTTTGCTTTNAATTCATTGTATTCTTTACTTTATTTTGGGTTATCCAATTTATATTTCTGTGGATTCTGCAAACTTGTTATATCTTCTCCGGGTTTTGCTTTGTCACTTTGCGTCTGTATTCGTTTTACACAAATTCTTATTTACAATGGGTGTACAATAAATAGTGTACACCGGAGTAAAAGTTGACTCAAAATGCTTAAAAGTTACATTTATATAGATAAAAGTTATCTATTTTTTAATGATAAATTTTTTCATTTGAATAAAAATTATTTATTCAAAATCACTAATAATGTATAAATTAATCATTTAACTCTTTAAAATGTTTATCTATCAACTTTTTAATTTTATAATATAAAAGTTACAGAAAAATAAGTTAAAGTTACGAAAAACTGCATAAAAGTTATCTTGGTGTAAAATAAATTTATTGTACACCTTGTGCGCGCAAGNCATAAAAGTTATCTTGGTGTAAAATAAATTTATTGTACACCTTGTGCGCGCAAGACCTTTTGTTCATTTTAAAGTTCAAAGGAAACATAAAGTTCGAACATGTTGTACCATTACTTTCAATTTCTTTATTCTATGGCACTATGGTTTTCTTTATTCTATGGCACTATGGTTTTGACTTTTACGTTTGTGAAGACACAATTAAAACCATTTACAATTTCAAGTAAAAAGTTAAAATTTTGCAAAAAGTACGAGGATTTTTACAGTGTGACCAAGGTTATTTTGAGGGGCGTGTTTACAAGTTCCAGGCATATGGCAATTATTCGACCACGGCCTTGATGCATGCTCGCCAGTTCCTAGCTACCCGTCTCCCGAAGATGAGGATACTCACTGCTGGGCTCAGTATTGGTTTAAGTTGGGATACTGGTTTCTTCTTCGAGCCCAACACCCCCAGATTGGTAGTAGTTCTAGATGTGGAAAATTAGCCTCCTGCCTCGTTGGAAATTCTCAAATGGTTTGGAGGAGTAGTGTTTTAGGTATAGACTCCTCAACCCCGTCAATGGAAGAGTAGCTTTCAAACCTCCTCGATCTGGAGGGAATGATGAAAGGGTAGTGCAGTTTGTTAGCATTTTGTGGTCAATTTTGCTACAACAAAATGATATCGTGTTTAAAGGCTTGAGTGTAAACCTGAGGAGTATTTTAAGGGCTGCACAGGTACACATCTGCAGATGGCGGAATGTGAAGGATTTGACAGTTGCAAGGAAGGCCGGGTGGTTGCTAACCCGAAGTTTCGAAGGCTCGAATCTGTCAGTTTTCAAGTCAGAAACAATATGTGTGGTTACAGAAGGTTGTTTCAAAATGTTTCTCAAGCTGATGGTTTCTGCCGTGCAGCTCTATATCTTACCAATGAACCAGGAATTAAGAAAAATAATCTCAAATTTCCAATTTATGCCAGTTAGTTAGTCGCAGATTCAATGTTGTCAGAATTCTTATTGCAAGAATTCAAGGGCAGTTGTTATCATGGTCGTCAGAGTCGCAGCTTCTTTAA

mRNA sequence

TCCGTAAGCGGTAACCTATTCCTGAGCCCAAATCTGACTAATAAACCGACCTGTAATTACCTGGCTTTTTGTTAATTCCTGATTAAATCAGTCACTTCAAACTATAACCACTCACATTCGGAAATCTGAAATTATACAAACCCTAGTTTTAATTCGCAAAGCAACAAATTGCGTGTTCATTCAATCAATCGATCTGTAGTTCAACGACTTCTCGATTCCTTTTCAATTCTTTGTTAAAGGTTTCTTTTGGTGATTTATCAATGACGAGGTTTAAGAAAGGAAGCATGGTGGAGGTCTTGTCCAAGAAAGACCTTTGGCGGTGTGCAAAAATCGTGGAGGACAATGGAGATGCTTACACAGTCAAATATTATCGTTGTCCAGGTATAGCTAAAGACGGTGTTGACAAGGTTTCAGCTAAAGCAGTCAGGCCTTGCCCAAGACCAGTGATGGGTACTAACAATTTGGTTGTTGGTAAAGTTGTGGAAGTATTAGATGATGGTTATTGGAGGGTTTCTGTGATTGAAGAGGTTCTGGAAGATGGTTATTGTTACATCAAGGTTATTGGATCTTTGGATGAGTTTAGAGTGAATAACTCTAGTATCAGAGCACGACAAGAATGGAAACAAAACAAGTGGATTCTGATGGATAAGGATTCTGAAAATCATGTGCACAACAAGTCCCAGCAGGAAGTTCTAGAATCCAATTTGCTTTCGAAGTCATTGAAGAGGTCATTTTCTGACCATTCATCCACTGCTGAAGCTTATGCTGAGTGTGTCCAGAAAAGAAGATTAGGAGACGAAGAGGTCGAGCTTGATGCCATAGATGGTGATGCATATTCCTTCAATGGAAAGGTAGACAACCCTGCTAACCAAAGGGGAAATCTTGGTAAAGATAATGTGCAAAATTTTACTGAGAAAACAATCAGATTTAATAAAGCTAACACCAGAAATCACAATGGTTTCTTGGGGCTAGATGATTGTGTCAGTAGTGTATCATCTGTTGGTAGTTGTAGCATCACTAATGCCATTTCTGATAGGTTGCTCAGCCACTCTTCAGCAGGAAGTAGACAGGATAGTGCTTCTCTTTGTAGTGATGCAGAGTCACATAGTCATTTGGGAGTGGAGGAAGAAATGTCTGATGGTCAGTCAGAAAGAGGAGATTGTGTAAGAACACATGAGTTAGATTTATATGGTTATCGATGCGTTTTAGAAACATTATATGCGTCTGGTCCCTTAAGTTGGCAACAAGAATTTGCTTTAACAAACCTCCGTATGAAACTTTTTGTTTCAAACGACGAACATTTGACAGAGCTGAGGAGATTCAATGTTGTCAGAATTCTTATTGCAAGAATTCAAGGGCAGTTGTTATCATGGTCGTCAGAGTCGCAGCTTCTTTAA

Coding sequence (CDS)

ATGACGAGGTTTAAGAAAGGAAGCATGGTGGAGGTCTTGTCCAAGAAAGACCTTTGGCGGTGTGCAAAAATCGTGGAGGACAATGGAGATGCTTACACAGTCAAATATTATCGTTGTCCAGGTATAGCTAAAGACGGTGTTGACAAGGTTTCAGCTAAAGCAGTCAGGCCTTGCCCAAGACCAGTGATGGGTACTAACAATTTGGTTGTTGGTAAAGTTGTGGAAGTATTAGATGATGGTTATTGGAGGGTTTCTGTGATTGAAGAGGTTCTGGAAGATGGTTATTGTTACATCAAGGTTATTGGATCTTTGGATGAGTTTAGAGTGAATAACTCTAGTATCAGAGCACGACAAGAATGGAAACAAAACAAGTGGATTCTGATGGATAAGGATTCTGAAAATCATGTGCACAACAAGTCCCAGCAGGAAGTTCTAGAATCCAATTTGCTTTCGAAGTCATTGAAGAGGTCATTTTCTGACCATTCATCCACTGCTGAAGCTTATGCTGAGTGTGTCCAGAAAAGAAGATTAGGAGACGAAGAGGTCGAGCTTGATGCCATAGATGGTGATGCATATTCCTTCAATGGAAAGGTAGACAACCCTGCTAACCAAAGGGGAAATCTTGGTAAAGATAATGTGCAAAATTTTACTGAGAAAACAATCAGATTTAATAAAGCTAACACCAGAAATCACAATGGTTTCTTGGGGCTAGATGATTGTGTCAGTAGTGTATCATCTGTTGGTAGTTGTAGCATCACTAATGCCATTTCTGATAGGTTGCTCAGCCACTCTTCAGCAGGAAGTAGACAGGATAGTGCTTCTCTTTGTAGTGATGCAGAGTCACATAGTCATTTGGGAGTGGAGGAAGAAATGTCTGATGGTCAGTCAGAAAGAGGAGATTGTGTAAGAACACATGAGTTAGATTTATATGGTTATCGATGCGTTTTAGAAACATTATATGCGTCTGGTCCCTTAAGTTGGCAACAAGAATTTGCTTTAACAAACCTCCGTATGAAACTTTTTGTTTCAAACGACGAACATTTGACAGAGCTGAGGAGATTCAATGTTGTCAGAATTCTTATTGCAAGAATTCAAGGGCAGTTGTTATCATGGTCGTCAGAGTCGCAGCTTCTTTAA

Protein sequence

MTRFKKGSMVEVLSKKDLWRCAKIVEDNGDAYTVKYYRCPGIAKDGVDKVSAKAVRPCPRPVMGTNNLVVGKVVEVLDDGYWRVSVIEEVLEDGYCYIKVIGSLDEFRVNNSSIRARQEWKQNKWILMDKDSENHVHNKSQQEVLESNLLSKSLKRSFSDHSSTAEAYAECVQKRRLGDEEVELDAIDGDAYSFNGKVDNPANQRGNLGKDNVQNFTEKTIRFNKANTRNHNGFLGLDDCVSSVSSVGSCSITNAISDRLLSHSSAGSRQDSASLCSDAESHSHLGVEEEMSDGQSERGDCVRTHELDLYGYRCVLETLYASGPLSWQQEFALTNLRMKLFVSNDEHLTELRRFNVVRILIARIQGQLLSWSSESQLL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo20030.1Spo20030.1mRNA


Homology
[Close]
BLAST of Spo20030.1 vs. NCBI nr
Match: gi|902160331|gb|KNA06423.1| (hypothetical protein SOVF_181120 [Spinacia oleracea])

HSP 1 Score: 582.0 bits (1499), Expect = 7.400e-163
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 1 

		  

Query: 1   MTRFKKGSMVEVLSKKDLWRCAKIVEDNGDAYTVKYYRCPGIAKDGVDKVSAKAVRPCPR 60
           MTRFKKGSMVEVLSKKDLWRCAKIVEDNGDAYTVKYYRCPGIAKDGVDKVSAKAVRPCPR
Sbjct: 1   MTRFKKGSMVEVLSKKDLWRCAKIVEDNGDAYTVKYYRCPGIAKDGVDKVSAKAVRPCPR 60

Query: 61  PVMGTNNLVVGKVVEVLDDGYWRVSVIEEVLEDGYCYIKVIGSLDEFRVNNSSIRARQEW 120
           PVMGTNNLVVGKVVEVLDDGYWRVSVIEEVLEDGYCYIKVIGSLDEFRVNNSSIRARQEW
Sbjct: 61  PVMGTNNLVVGKVVEVLDDGYWRVSVIEEVLEDGYCYIKVIGSLDEFRVNNSSIRARQEW 120

Query: 121 KQNKWILMDKDSENHVHNKSQQEVLESNLLSKSLKRSFSDHSSTAEAYAECVQKRRLGDE 180
           KQNKWILMDKDSENHVHNKSQQEVLESNLLSKSLKRSFSDHSSTAEAYAECVQKRRLGDE
Sbjct: 121 KQNKWILMDKDSENHVHNKSQQEVLESNLLSKSLKRSFSDHSSTAEAYAECVQKRRLGDE 180

Query: 181 EVELDAIDGDAYSFNGKVDNPANQRGNLGKDNVQNFTEKTIRFNKANTRNHNGFLGLDDC 240
           EVELDAIDGDAYSFNGKVDNPANQRGNLGKDNVQNFTEKTIRFNKANTRNHNGFLGLDDC
Sbjct: 181 EVELDAIDGDAYSFNGKVDNPANQRGNLGKDNVQNFTEKTIRFNKANTRNHNGFLGLDDC 240

Query: 241 VSSVSSVGSCSITNAISDRLLSHSSAGSRQDSASLCSDAESHSHLGVEEEMSDG 295
           VSSVSSVGSCSITNAISDRLLSHSSAGSRQDSASLCSDAESHSHLGVEEEMSDG
Sbjct: 241 VSSVSSVGSCSITNAISDRLLSHSSAGSRQDSASLCSDAESHSHLGVEEEMSDG 294
[Close]
BLAST of Spo20030.1 vs. NCBI nr
Match: gi|731320211|ref|XP_010670685.1| (PREDICTED: uncharacterized protein LOC104887681 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 503.4 bits (1295), Expect = 3.300e-139
Identity = 269/374 (71.93%), Postives = 301/374 (80.48%), Query Frame = 1 

		  

Query: 3   RFKKGSMVEVLSKKD---LWRCAKIVEDNGDAYTVKYYRCPGIAKDGVDKVSAKAVRPCP 62
           RFK+GSMVEVLSKK+    WRCA+IV DNGD YTV+YYR PGIAKDGVD V A+AVR CP
Sbjct: 2   RFKRGSMVEVLSKKEPSGAWRCAEIVADNGDGYTVRYYRRPGIAKDGVDNVQAEAVRSCP 61

Query: 63  RPVMGTNNLVVGKVVEVLDDGYWRVSVIEEVLEDGYCYIKVIGSLDEFRVNNSSIRARQE 122
           RP  G+ N VVG +VEVLDDGYWRV+ I+EV+ED YCYI+VIGSLDEFRV NSSIRARQE
Sbjct: 62  RPATGSRNFVVGDIVEVLDDGYWRVARIDEVMEDDYCYIRVIGSLDEFRVKNSSIRARQE 121

Query: 123 WKQNKWILMDKDSEN------------HVHNKSQ----QEVLESNLLSKSLKRSFSDHSS 182
           WK NKW+LMDK  EN            HV  +S     QEV ES ++SKSLKRS  D++S
Sbjct: 122 WKNNKWVLMDKKFENRKDLVTRMCKKSHVEPQSNLHEVQEVPESVVMSKSLKRSSPDYAS 181

Query: 183 TAEAYAECVQKRRLGDEEVELDAIDGDAYSFNGKVDNPANQRGNLGKDNVQNFTEKTIRF 242
              AY++CVQKRRL D+EVELDAI G+AYSF GKVDNPANQ GNLG+DNVQ  TEKTIRF
Sbjct: 182 ADNAYSKCVQKRRL-DKEVELDAIHGEAYSFTGKVDNPANQWGNLGRDNVQIITEKTIRF 241

Query: 243 NKANTRNHNGFLGLDDCVSSVSSVGSCSITNAISDRLLSHSSAGSRQDSASLCSDAESHS 302
           NKAN+RNH     LDDCVS+ SSV SCSITNAISDRLLS SSAG  QDSASL SDAESHS
Sbjct: 242 NKANSRNHE----LDDCVSTESSVASCSITNAISDRLLSDSSAGCSQDSASLSSDAESHS 301

Query: 303 HLGVEEEMSDGQSERGDCVRTHELDLYGYRCVLETLYASGPLSWQQEFALTNLRMKLFVS 358
           +LG EEE+S GQ ER D ++THELDLYGYRCVLE+LYASGPLSWQQE ALTNLR+KL+VS
Sbjct: 302 YLGEEEEVSQGQFERDDALQTHELDLYGYRCVLESLYASGPLSWQQETALTNLRLKLYVS 361
[Close]
BLAST of Spo20030.1 vs. NCBI nr
Match: gi|902206093|gb|KNA15377.1| (hypothetical protein SOVF_098780 [Spinacia oleracea])

HSP 1 Score: 312.0 bits (798), Expect = 1.400e-81
Identity = 191/381 (50.13%), Postives = 239/381 (62.73%), Query Frame = 1 

		  

Query: 3   RFKKGSMVEVLSKKD----LWRCAKIVEDNGDAYTVKYYRCPGIAKDGVDKVSAKAVRPC 62
           RF KGSMVEV SKK     +WRCA+IVEDNGD YTV+YYR P +AK+GVDKV +  VRP 
Sbjct: 2   RFDKGSMVEVFSKKKDPSGVWRCAQIVEDNGDGYTVRYYRSPHVAKEGVDKVPSGIVRPR 61

Query: 63  PRPVMGTNNLVVGKVVEVLDDGYWRVSVIEEVLEDGYCY-IKVIGSLDEFRVNNSSIRAR 122
           P  + G+    VG V+EVLDDGYWRVS+IEEV+ED   Y I+VIGS+D+FRV  S +RAR
Sbjct: 62  PPSLTGSTVWAVGDVLEVLDDGYWRVSMIEEVIEDDEYYGIQVIGSVDQFRVRKSGVRAR 121

Query: 123 QEWKQNKWILMDKDS------------ENHVHNKSQQEVLESN---LLSKSLKRSFSDHS 182
           QEWK N+W+ M+KDS              H+  +    +L+     LLSK+ KRS  D+ 
Sbjct: 122 QEWKDNQWVPMEKDSGIDKKLISRMQKMAHMQTQGDLNILKDQKFVLLSKTRKRSLEDYL 181

Query: 183 STAEAYAECVQKRRLGDEEVELDAIDGDAYSFNGKVDNPANQRGNLGKDNVQNFTEKTIR 242
           S  EAY EC Q++   ++EVE      D+YSF GKV  P   R  LGK+ VQ  +++T +
Sbjct: 182 SNDEAYLECGQQQNAVNKEVEHHV--EDSYSFTGKVQTPGKLRKILGKEKVQ-ISKETTK 241

Query: 243 FNKANTRNHN-----GFLGLDDCVSSVSSVGSCSITNAISDRLLSHSSAGSRQDSASLCS 302
           FN  + + ++     G     DCV   SSVGS S  +A  DRL+SH S+   QDS S   
Sbjct: 242 FNNTSYKKYDNPQPLGRTFEHDCVDDKSSVGSNSNCDAHFDRLVSHLSSSCSQDSDS--- 301

Query: 303 DAESHSHLGVEEEMSDGQSERGDCVRTHELDLYGYRCVLETLYASGPLSWQQEFALTNLR 359
            AES +H G +E MS G S+R D +R+HEL+L  YR  LE LYA GPLSW+ E  LTNLR
Sbjct: 302 -AESVNHKGDDEGMSPGHSKRVDTLRSHELELSSYRSTLEALYACGPLSWELETYLTNLR 361
[Close]
BLAST of Spo20030.1 vs. NCBI nr
Match: gi|731320216|ref|XP_010670687.1| (PREDICTED: uncharacterized protein LOC104887681 isoform X3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 270.0 bits (689), Expect = 6.200e-69
Identity = 143/214 (66.82%), Postives = 164/214 (76.64%), Query Frame = 1 

		  

Query: 3   RFKKGSMVEVLSKKD---LWRCAKIVEDNGDAYTVKYYRCPGIAKDGVDKVSAKAVRPCP 62
           RFK+GSMVEVLSKK+    WRCA+IV DNGD YTV+YYR PGIAKDGVD V A+AVR CP
Sbjct: 2   RFKRGSMVEVLSKKEPSGAWRCAEIVADNGDGYTVRYYRRPGIAKDGVDNVQAEAVRSCP 61

Query: 63  RPVMGTNNLVVGKVVEVLDDGYWRVSVIEEVLEDGYCYIKVIGSLDEFRVNNSSIRARQE 122
           RP  G+ N VVG +VEVLDDGYWRV+ I+EV+ED YCYI+VIGSLDEFRV NSSIRARQE
Sbjct: 62  RPATGSRNFVVGDIVEVLDDGYWRVARIDEVMEDDYCYIRVIGSLDEFRVKNSSIRARQE 121

Query: 123 WKQNKWILMDKDSEN------------HVHNKSQ----QEVLESNLLSKSLKRSFSDHSS 182
           WK NKW+LMDK  EN            HV  +S     QEV ES ++SKSLKRS  D++S
Sbjct: 122 WKNNKWVLMDKKFENRKDLVTRMCKKSHVEPQSNLHEVQEVPESVVMSKSLKRSSPDYAS 181

Query: 183 TAEAYAECVQKRRLGDEEVELDAIDGDAYSFNGK 198
              AY++CVQKRRL D+EVELDAI G+AYSF GK
Sbjct: 182 ADNAYSKCVQKRRL-DKEVELDAIHGEAYSFTGK 214
[Close]
BLAST of Spo20030.1 vs. NCBI nr
Match: gi|731320213|ref|XP_010670686.1| (PREDICTED: uncharacterized protein LOC104887681 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 256.9 bits (655), Expect = 5.500e-65
Identity = 137/206 (66.50%), Postives = 157/206 (76.21%), Query Frame = 1 

		  

Query: 3   RFKKGSMVEVLSKKD---LWRCAKIVEDNGDAYTVKYYRCPGIAKDGVDKVSAKAVRPCP 62
           RFK+GSMVEVLSKK+    WRCA+IV DNGD YTV+YYR PGIAKDGVD V A+AVR CP
Sbjct: 2   RFKRGSMVEVLSKKEPSGAWRCAEIVADNGDGYTVRYYRRPGIAKDGVDNVQAEAVRSCP 61

Query: 63  RPVMGTNNLVVGKVVEVLDDGYWRVSVIEEVLEDGYCYIKVIGSLDEFRVNNSSIRARQE 122
           RP  G+ N VVG +VEVLDDGYWRV+ I+EV+ED YCYI+VIGSLDEFRV NSSIRARQE
Sbjct: 62  RPATGSRNFVVGDIVEVLDDGYWRVARIDEVMEDDYCYIRVIGSLDEFRVKNSSIRARQE 121

Query: 123 WKQNKWILMDKDSEN------------HVHNKSQ----QEVLESNLLSKSLKRSFSDHSS 182
           WK NKW+LMDK  EN            HV  +S     QEV ES ++SKSLKRS  D++S
Sbjct: 122 WKNNKWVLMDKKFENRKDLVTRMCKKSHVEPQSNLHEVQEVPESVVMSKSLKRSSPDYAS 181

Query: 183 TAEAYAECVQKRRLGDEEVELDAIDG 190
              AY++CVQKRRL D+EVELDAI G
Sbjct: 182 ADNAYSKCVQKRRL-DKEVELDAIHG 206
[Close]
BLAST of Spo20030.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QIA5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_181120 PE=4 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 5.200e-163
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 1 

		  

Query: 1   MTRFKKGSMVEVLSKKDLWRCAKIVEDNGDAYTVKYYRCPGIAKDGVDKVSAKAVRPCPR 60
           MTRFKKGSMVEVLSKKDLWRCAKIVEDNGDAYTVKYYRCPGIAKDGVDKVSAKAVRPCPR
Sbjct: 1   MTRFKKGSMVEVLSKKDLWRCAKIVEDNGDAYTVKYYRCPGIAKDGVDKVSAKAVRPCPR 60

Query: 61  PVMGTNNLVVGKVVEVLDDGYWRVSVIEEVLEDGYCYIKVIGSLDEFRVNNSSIRARQEW 120
           PVMGTNNLVVGKVVEVLDDGYWRVSVIEEVLEDGYCYIKVIGSLDEFRVNNSSIRARQEW
Sbjct: 61  PVMGTNNLVVGKVVEVLDDGYWRVSVIEEVLEDGYCYIKVIGSLDEFRVNNSSIRARQEW 120

Query: 121 KQNKWILMDKDSENHVHNKSQQEVLESNLLSKSLKRSFSDHSSTAEAYAECVQKRRLGDE 180
           KQNKWILMDKDSENHVHNKSQQEVLESNLLSKSLKRSFSDHSSTAEAYAECVQKRRLGDE
Sbjct: 121 KQNKWILMDKDSENHVHNKSQQEVLESNLLSKSLKRSFSDHSSTAEAYAECVQKRRLGDE 180

Query: 181 EVELDAIDGDAYSFNGKVDNPANQRGNLGKDNVQNFTEKTIRFNKANTRNHNGFLGLDDC 240
           EVELDAIDGDAYSFNGKVDNPANQRGNLGKDNVQNFTEKTIRFNKANTRNHNGFLGLDDC
Sbjct: 181 EVELDAIDGDAYSFNGKVDNPANQRGNLGKDNVQNFTEKTIRFNKANTRNHNGFLGLDDC 240

Query: 241 VSSVSSVGSCSITNAISDRLLSHSSAGSRQDSASLCSDAESHSHLGVEEEMSDG 295
           VSSVSSVGSCSITNAISDRLLSHSSAGSRQDSASLCSDAESHSHLGVEEEMSDG
Sbjct: 241 VSSVSSVGSCSITNAISDRLLSHSSAGSRQDSASLCSDAESHSHLGVEEEMSDG 294
[Close]
BLAST of Spo20030.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CTA8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g043060 PE=4 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 2.300e-139
Identity = 269/374 (71.93%), Postives = 301/374 (80.48%), Query Frame = 1 

		  

Query: 3   RFKKGSMVEVLSKKD---LWRCAKIVEDNGDAYTVKYYRCPGIAKDGVDKVSAKAVRPCP 62
           RFK+GSMVEVLSKK+    WRCA+IV DNGD YTV+YYR PGIAKDGVD V A+AVR CP
Sbjct: 2   RFKRGSMVEVLSKKEPSGAWRCAEIVADNGDGYTVRYYRRPGIAKDGVDNVQAEAVRSCP 61

Query: 63  RPVMGTNNLVVGKVVEVLDDGYWRVSVIEEVLEDGYCYIKVIGSLDEFRVNNSSIRARQE 122
           RP  G+ N VVG +VEVLDDGYWRV+ I+EV+ED YCYI+VIGSLDEFRV NSSIRARQE
Sbjct: 62  RPATGSRNFVVGDIVEVLDDGYWRVARIDEVMEDDYCYIRVIGSLDEFRVKNSSIRARQE 121

Query: 123 WKQNKWILMDKDSEN------------HVHNKSQ----QEVLESNLLSKSLKRSFSDHSS 182
           WK NKW+LMDK  EN            HV  +S     QEV ES ++SKSLKRS  D++S
Sbjct: 122 WKNNKWVLMDKKFENRKDLVTRMCKKSHVEPQSNLHEVQEVPESVVMSKSLKRSSPDYAS 181

Query: 183 TAEAYAECVQKRRLGDEEVELDAIDGDAYSFNGKVDNPANQRGNLGKDNVQNFTEKTIRF 242
              AY++CVQKRRL D+EVELDAI G+AYSF GKVDNPANQ GNLG+DNVQ  TEKTIRF
Sbjct: 182 ADNAYSKCVQKRRL-DKEVELDAIHGEAYSFTGKVDNPANQWGNLGRDNVQIITEKTIRF 241

Query: 243 NKANTRNHNGFLGLDDCVSSVSSVGSCSITNAISDRLLSHSSAGSRQDSASLCSDAESHS 302
           NKAN+RNH     LDDCVS+ SSV SCSITNAISDRLLS SSAG  QDSASL SDAESHS
Sbjct: 242 NKANSRNHE----LDDCVSTESSVASCSITNAISDRLLSDSSAGCSQDSASLSSDAESHS 301

Query: 303 HLGVEEEMSDGQSERGDCVRTHELDLYGYRCVLETLYASGPLSWQQEFALTNLRMKLFVS 358
           +LG EEE+S GQ ER D ++THELDLYGYRCVLE+LYASGPLSWQQE ALTNLR+KL+VS
Sbjct: 302 YLGEEEEVSQGQFERDDALQTHELDLYGYRCVLESLYASGPLSWQQETALTNLRLKLYVS 361
[Close]
BLAST of Spo20030.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R9B6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_098780 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.000e-81
Identity = 191/381 (50.13%), Postives = 239/381 (62.73%), Query Frame = 1 

		  

Query: 3   RFKKGSMVEVLSKKD----LWRCAKIVEDNGDAYTVKYYRCPGIAKDGVDKVSAKAVRPC 62
           RF KGSMVEV SKK     +WRCA+IVEDNGD YTV+YYR P +AK+GVDKV +  VRP 
Sbjct: 2   RFDKGSMVEVFSKKKDPSGVWRCAQIVEDNGDGYTVRYYRSPHVAKEGVDKVPSGIVRPR 61

Query: 63  PRPVMGTNNLVVGKVVEVLDDGYWRVSVIEEVLEDGYCY-IKVIGSLDEFRVNNSSIRAR 122
           P  + G+    VG V+EVLDDGYWRVS+IEEV+ED   Y I+VIGS+D+FRV  S +RAR
Sbjct: 62  PPSLTGSTVWAVGDVLEVLDDGYWRVSMIEEVIEDDEYYGIQVIGSVDQFRVRKSGVRAR 121

Query: 123 QEWKQNKWILMDKDS------------ENHVHNKSQQEVLESN---LLSKSLKRSFSDHS 182
           QEWK N+W+ M+KDS              H+  +    +L+     LLSK+ KRS  D+ 
Sbjct: 122 QEWKDNQWVPMEKDSGIDKKLISRMQKMAHMQTQGDLNILKDQKFVLLSKTRKRSLEDYL 181

Query: 183 STAEAYAECVQKRRLGDEEVELDAIDGDAYSFNGKVDNPANQRGNLGKDNVQNFTEKTIR 242
           S  EAY EC Q++   ++EVE      D+YSF GKV  P   R  LGK+ VQ  +++T +
Sbjct: 182 SNDEAYLECGQQQNAVNKEVEHHV--EDSYSFTGKVQTPGKLRKILGKEKVQ-ISKETTK 241

Query: 243 FNKANTRNHN-----GFLGLDDCVSSVSSVGSCSITNAISDRLLSHSSAGSRQDSASLCS 302
           FN  + + ++     G     DCV   SSVGS S  +A  DRL+SH S+   QDS S   
Sbjct: 242 FNNTSYKKYDNPQPLGRTFEHDCVDDKSSVGSNSNCDAHFDRLVSHLSSSCSQDSDS--- 301

Query: 303 DAESHSHLGVEEEMSDGQSERGDCVRTHELDLYGYRCVLETLYASGPLSWQQEFALTNLR 359
            AES +H G +E MS G S+R D +R+HEL+L  YR  LE LYA GPLSW+ E  LTNLR
Sbjct: 302 -AESVNHKGDDEGMSPGHSKRVDTLRSHELELSSYRSTLEALYACGPLSWELETYLTNLR 361
[Close]
BLAST of Spo20030.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CY05_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g043060 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 4.300e-69
Identity = 143/214 (66.82%), Postives = 164/214 (76.64%), Query Frame = 1 

		  

Query: 3   RFKKGSMVEVLSKKD---LWRCAKIVEDNGDAYTVKYYRCPGIAKDGVDKVSAKAVRPCP 62
           RFK+GSMVEVLSKK+    WRCA+IV DNGD YTV+YYR PGIAKDGVD V A+AVR CP
Sbjct: 2   RFKRGSMVEVLSKKEPSGAWRCAEIVADNGDGYTVRYYRRPGIAKDGVDNVQAEAVRSCP 61

Query: 63  RPVMGTNNLVVGKVVEVLDDGYWRVSVIEEVLEDGYCYIKVIGSLDEFRVNNSSIRARQE 122
           RP  G+ N VVG +VEVLDDGYWRV+ I+EV+ED YCYI+VIGSLDEFRV NSSIRARQE
Sbjct: 62  RPATGSRNFVVGDIVEVLDDGYWRVARIDEVMEDDYCYIRVIGSLDEFRVKNSSIRARQE 121

Query: 123 WKQNKWILMDKDSEN------------HVHNKSQ----QEVLESNLLSKSLKRSFSDHSS 182
           WK NKW+LMDK  EN            HV  +S     QEV ES ++SKSLKRS  D++S
Sbjct: 122 WKNNKWVLMDKKFENRKDLVTRMCKKSHVEPQSNLHEVQEVPESVVMSKSLKRSSPDYAS 181

Query: 183 TAEAYAECVQKRRLGDEEVELDAIDGDAYSFNGK 198
              AY++CVQKRRL D+EVELDAI G+AYSF GK
Sbjct: 182 ADNAYSKCVQKRRL-DKEVELDAIHGEAYSFTGK 214
[Close]
BLAST of Spo20030.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CUZ0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g038750 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.800e-54
Identity = 153/297 (51.52%), Postives = 181/297 (60.94%), Query Frame = 1 

		  

Query: 71  GKVVEVLDD-GYWRVSVIEEVLEDGYCYIKVIGSLDEFRVNNSSIRARQEWKQNKWILMD 130
           G VVEVLD+ GYWR S+I EV+EDG+ ++ V  S     V  +S+RARQEWK  K     
Sbjct: 8   GDVVEVLDNKGYWRESMINEVMEDGFYFVWVFDSAHHLIVEKTSVRARQEWKDKKV---- 67

Query: 131 KDSENHVHNKSQQEVLESNLLSKSLKRSFSDHSSTA-EAYAECVQKRRLGDEEVELDAID 190
             ++  VH           +LSKSLKRS  D++S   +AY++CVQKRRL D+EV+LD I 
Sbjct: 68  --ADQSVH-----------VLSKSLKRSSPDYASADNKAYSKCVQKRRLVDKEVDLDVIH 127

Query: 191 GDAYSFNGKVDNP--ANQRGNLGKDNVQNFTEKTIRFNKANTRNHNGFLGLDDCVSSVSS 250
           GDAYSF GKVDN      +  +G  N            K N+R H     L+DC S+ SS
Sbjct: 128 GDAYSFTGKVDNVQITTDKKTIGDSN-----------GKGNSRKHE----LNDCSSTASS 187

Query: 251 VGSCSITNAI---SDRLLSHSSAG-SRQD---SASLCSDAESHS-HLGVEEEMSDGQSER 310
           V SCSIT+A      RLLSHSSAG S QD   S SL SDAES+S  LG EEE+S      
Sbjct: 188 VASCSITSAAIPDDSRLLSHSSAGCSSQDQDHSVSLSSDAESYSLDLGEEEEVSS----- 247

Query: 311 GDCVRTHELDLYGYRCVLETLYASGPLSWQQEFALTNLRMKLFVSNDEHLTELRRFN 356
                 HEL L+GYRCVLE LY SGPLSWQQE  LT LR+KL VSNDEHL ELR  N
Sbjct: 248 -----DHELKLHGYRCVLELLYKSGPLSWQQEIELTKLRLKLSVSNDEHLAELRSSN 262
[Close]
BLAST of Spo20030.1 vs. TAIR (Arabidopsis)
Match: AT4G32440.2 (Plant Tudor-like RNA-binding protein)

HSP 1 Score: 154.8 bits (390), Expect = 1.000e-37
Identity = 121/375 (32.27%), Postives = 188/375 (50.13%), Query Frame = 1 

		  

Query: 3   RFKKGSMVEVLSKKDL----WRCAKIVEDNGDAYTVKYYRCPGIAKDGV-DKVSAKAVRP 62
           R +KGS VEV S K+     WRCA+IV  NG  Y V++Y      ++ V +KV  K +RP
Sbjct: 2   RIRKGSRVEVFSNKEAPYGAWRCAEIVSGNGHTYNVRFYSFQIEHEEAVMEKVPRKIIRP 61

Query: 63  CPRPVMGTNNLVVGKVVEVLDDGYWRVSVIEEVLEDGYCYIKVIGSLDEFRVNNSSIRAR 122
           CP P++       G++VEVLD+  W+ + + E L   Y  ++++G+ +E   +  ++RAR
Sbjct: 62  CP-PLVDVERWDTGELVEVLDNFSWKAATVREELSGHYYVVRLLGTPEELTFHKVNLRAR 121

Query: 123 QEWKQNKWILMDKDSEN---------HVHNKSQQE-----VLESNLLSKSLKRSFSDHSS 182
           + W+  +W+ + K S +          VH K Q       + E +++S  L +  S ++ 
Sbjct: 122 KSWQDERWVAIGKISGSLKSSTLTGSDVHQKLQPHRNSMPLHEPSVVSARLLKRPSPYN- 181

Query: 183 TAEAYAECVQKRRLGDEEVELDAIDGDAYSFNGKVDNPANQRGNLGKDNVQ----NFTEK 242
               ++EC +      +++     +G     +     P N RG  GK +VQ    N    
Sbjct: 182 ----WSECAESCTGNPKKMRSLEKEGQQQKVDAISCRPEN-RG--GKSHVQASLNNHKTG 241

Query: 243 TIRFNKANTRNHNGFLGLDDCVSS-VSSVGSCSITNAISDRLLSHSSAGSRQDSASLCSD 302
             +  +  ++  +  +  DDC  S V SVGSCS T+     +      GS Q + S  SD
Sbjct: 242 YCQIVRVRSKGFSESVRADDCSDSDVCSVGSCSATSYDESNMPPCMLDGSTQQADSCSSD 301

Query: 303 AESHSHLGVE---EEMSDGQSERGDCVRTHELDLYGYRCVLETLYASGPLSWQQEFALTN 351
           AES   LG E   +  S G   R  C      +LY YR  L  L++SGPLSW+QE +LT+
Sbjct: 302 AESSCGLGEEPRWKHSSVGDGARNSC----RSELYSYRSTLGELFSSGPLSWEQEASLTD 361
[Close]
BLAST of Spo20030.1 vs. TAIR (Arabidopsis)
Match: AT5G20030.1 (Plant Tudor-like RNA-binding protein)

HSP 1 Score: 124.4 bits (311), Expect = 1.500e-28
Identity = 104/357 (29.13%), Postives = 167/357 (46.78%), Query Frame = 1 

		  

Query: 3   RFKKGSMVEVLSKKDL----WRCAKIVEDNGDAYTVKYYRCPGIAKDGVDKVSAKAVRPC 62
           RF KG+ VEVLSK  +    WR A+I+  NG  YTV Y        DG ++V  K++RP 
Sbjct: 2   RFNKGTKVEVLSKSSVPSGAWRSAEIISGNGHYYTVMYDH-----NDGTERVPRKSMRPE 61

Query: 63  PRPVMGTNNLVVGKVVEVLDDGYWRVSVIEEVLEDGYCYIKVIGSLDEFRVNNSSIRARQ 122
           P  +   +    G ++EV     W+++++ +VL +G   ++++GS  +F+V  S IR RQ
Sbjct: 62  PPRLQVLDAWCPGDILEVFQSCSWKMAIVSKVLGNGCFLVRLLGSSLKFKVTKSDIRVRQ 121

Query: 123 EWKQNKWILMDKDSENHVHNKSQQEVLESNLLSKSLKRSFSDHSSTAEAYAECVQKRRLG 182
            W+ N+WI++ + +            L +   +  L+R  +        Y     K +L 
Sbjct: 122 SWQDNEWIMIGQGTSR----------LSAQTSTGELRRKVNPKGD----YISSESKDKLD 181

Query: 183 DEEVELD-AIDGDAYSFNGKVDNPANQRGNLGKDNVQNFTEKTIRFNKANTRNHNGFLGL 242
           + +V L   +    YS    +  P NQ         +       RF +            
Sbjct: 182 ESDVPLSVGLKKRTYS----LVEPHNQ--------TRALAAYPPRFREEVKEEE------ 241

Query: 243 DDCVSSVSSVGSCSI-TNAISDRLLSHSSAGSRQDSASLCSDAESHSHLGVEEEMSDGQS 302
           +D  S  SSVGSC + T+ +S    +    G+  D+ S          L V  + S+   
Sbjct: 242 EDRESVASSVGSCCMDTDGLSAVSFNPIETGNSSDTESSSCGYGKVKKLVVPRKGSEAAD 301

Query: 303 ERGDCVRTHELDLYGYRCVLETLYASGP-LSWQQEFALTNLRMKLFVSNDEHLTELR 353
                   H L+L  YR  +E L+ASGP ++W+QE  +TNLR+KL +SN+EHL ++R
Sbjct: 302 -------VHRLELDAYRSSIERLHASGPIITWEQETWITNLRLKLNISNEEHLMQIR 314
[Close]
BLAST of Spo20030.1 vs. TAIR (Arabidopsis)
Match: AT2G25590.1 (Plant Tudor-like protein)

HSP 1 Score: 95.1 bits (235), Expect = 9.700e-20
Identity = 51/137 (37.23%), Postives = 83/137 (60.58%), Query Frame = 1 

		  

Query: 3   RFKKGSMVEVLSKKD----LWRCAKIVEDNGDAYTVKYYRCPGIAKDGV--DKVSAKAVR 62
           RF++GS VEV S K+    +WR A+I+  NG  Y V+YY    IA + V  D+V  K +R
Sbjct: 2   RFRRGSRVEVFSIKEASYGVWRSAEIISGNGHTYNVRYYSFE-IANNEVVEDRVPRKIIR 61

Query: 63  PCPRPVMGTNNLVVGKVVEVLDDGY-WRVSVIEEVLEDGYCYIKVIGSLDEFRVNNSSIR 122
           PCP P +  +    G++VEVLD+   W+ + + EVL   Y  ++++G+  E  V+   +R
Sbjct: 62  PCP-PQVDVDRWEAGELVEVLDNNISWKTATVLEVLSGRYYVVRLLGAKAELTVHKVYLR 121

Query: 123 ARQEWKQNKWILMDKDS 133
           ARQ W+  +W+++ K++
Sbjct: 122 ARQSWQDERWVMIGKET 136
The following BLAST results are available for this feature:
BLAST of Spo20030.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902160331|gb|KNA06423.1|7.4e-163100.hypothetical protein SOVF_1811... [more]
gi|731320211|ref|XP_010670685.1|3.3e-13971.9PREDICTED: uncharacterized pro... [more]
gi|902206093|gb|KNA15377.1|1.4e-8150.1hypothetical protein SOVF_0987... [more]
gi|731320216|ref|XP_010670687.1|6.2e-6966.8PREDICTED: uncharacterized pro... [more]
gi|731320213|ref|XP_010670686.1|5.5e-6566.5PREDICTED: uncharacterized pro... [more]
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BLAST of Spo20030.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QIA5_SPIOL5.2e-163100.Uncharacterized protein OS=Spi... [more]
A0A0J8CTA8_BETVU2.3e-13971.9Uncharacterized protein OS=Bet... [more]
A0A0K9R9B6_SPIOL1.0e-8150.1Uncharacterized protein OS=Spi... [more]
A0A0J8CY05_BETVU4.3e-6966.8Uncharacterized protein OS=Bet... [more]
A0A0J8CUZ0_BETVU1.8e-5451.5Uncharacterized protein OS=Bet... [more]
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BLAST of Spo20030.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo20030.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT4G32440.21.0e-3732.2Plant Tudor-like RNA-binding p... [more]
AT5G20030.11.5e-2829.1Plant Tudor-like RNA-binding p... [more]
AT2G25590.19.7e-2037.2Plant Tudor-like protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005491ENT domainPFAMPF03735ENTcoord: 305..354
score: 3.
IPR005491ENT domainSMARTSM01191ENT_2coord: 301..366
score: 7.3
IPR005491ENT domainPROFILEPS51138ENTcoord: 300..378
score: 11
IPR005491ENT domainunknownSSF158639ENT-likecoord: 304..355
score: 2.75
IPR008395Agenet-like domainPFAMPF05641Agenetcoord: 7..59
score: 1.
IPR014002Agenet domain, plant typeSMARTSM00743agenet_At_2coord: 66..122
score: 8.4E-5coord: 2..63
score: 6.
NoneNo IPR availablePANTHERPTHR31917FAMILY NOT NAMEDcoord: 3..352
score: 8.5
NoneNo IPR availablePANTHERPTHR31917:SF5SUBFAMILY NOT NAMEDcoord: 3..352
score: 8.5

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043631 RNA polyadenylation
biological_process GO:0006281 DNA repair
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0009743 response to carbohydrate
biological_process GO:2000026 regulation of multicellular organismal development
biological_process GO:1902531 regulation of intracellular signal transduction
biological_process GO:0000165 MAPK cascade
biological_process GO:0009873 ethylene-activated signaling pathway
biological_process GO:0048513 animal organ development
biological_process GO:0016567 protein ubiquitination
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0007064 mitotic sister chromatid cohesion
biological_process GO:0051321 meiotic cell cycle
biological_process GO:0051607 defense response to virus
biological_process GO:0006357 regulation of transcription by RNA polymerase II
biological_process GO:0051301 cell division
biological_process GO:0042761 very long-chain fatty acid biosynthetic process
biological_process GO:0010048 vernalization response
biological_process GO:0009826 unidimensional cell growth
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0006457 protein folding
biological_process GO:0000226 microtubule cytoskeleton organization
biological_process GO:0048527 lateral root development
biological_process GO:0030010 establishment of cell polarity
biological_process GO:0009880 embryonic pattern specification
biological_process GO:0009736 cytokinin-activated signaling pathway
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0030154 cell differentiation
biological_process GO:0016573 histone acetylation
biological_process GO:0048657 anther wall tapetum cell differentiation
biological_process GO:0031047 gene silencing by RNA
biological_process GO:0002237 response to molecule of bacterial origin
biological_process GO:0034645 cellular macromolecule biosynthetic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0017148 negative regulation of translation
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0007165 signal transduction
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0006614 SRP-dependent cotranslational protein targeting to membrane
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0048767 root hair elongation
biological_process GO:1900140 regulation of seedling development
biological_process GO:0043481 anthocyanin accumulation in tissues in response to UV light
biological_process GO:0010817 regulation of hormone levels
biological_process GO:0009911 positive regulation of flower development
biological_process GO:0000271 polysaccharide biosynthetic process
biological_process GO:0010584 pollen exine formation
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0060548 negative regulation of cell death
biological_process GO:0009825 multidimensional cell growth
biological_process GO:0048366 leaf development
biological_process GO:0009729 detection of brassinosteroid stimulus
biological_process GO:0042742 defense response to bacterium
biological_process GO:0071555 cell wall organization
biological_process GO:0009932 cell tip growth
biological_process GO:0009742 brassinosteroid mediated signaling pathway
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006464 cellular protein modification process
biological_process GO:0006568 tryptophan metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006574 valine catabolic process
biological_process GO:0044206 UMP salvage
biological_process GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process
biological_process GO:0007033 vacuole organization
biological_process GO:0018874 benzoate metabolic process
biological_process GO:0009737 response to abscisic acid
biological_process GO:0019482 beta-alanine metabolic process
biological_process GO:0016310 phosphorylation
biological_process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process GO:0044211 CTP salvage
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006550 isoleucine catabolic process
biological_process GO:0006552 leucine catabolic process
biological_process GO:0046251 limonene catabolic process
biological_process GO:0006554 lysine catabolic process
biological_process GO:0031323 regulation of cellular metabolic process
biological_process GO:0006508 proteolysis
biological_process GO:0060255 regulation of macromolecule metabolic process
biological_process GO:0071494 cellular response to UV-C
biological_process GO:0048856 anatomical structure development
biological_process GO:0019985 translesion synthesis
biological_process GO:0010224 response to UV-B
biological_process GO:0010212 response to ionizing radiation
biological_process GO:0043687 post-translational protein modification
biological_process GO:0006996 organelle organization
biological_process GO:0007275 multicellular organism development
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0000724 double-strand break repair via homologous recombination
biological_process GO:0006260 DNA replication
biological_process GO:0046488 phosphatidylinositol metabolic process
biological_process GO:0009987 cellular process
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0000159 protein phosphatase type 2A complex
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0005768 endosome
cellular_component GO:0009507 chloroplast
cellular_component GO:0010008 endosome membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005785 signal recognition particle receptor complex
cellular_component GO:0032991 protein-containing complex
cellular_component GO:0005786 signal recognition particle, endoplasmic reticulum targeting
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005829 cytosol
cellular_component GO:0016035 zeta DNA polymerase complex
cellular_component GO:0000785 chromatin
cellular_component GO:0000775 chromosome, centromeric region
cellular_component GO:0005819 spindle
cellular_component GO:0009506 plasmodesma
cellular_component GO:0016363 nuclear matrix
cellular_component GO:0005737 cytoplasm
cellular_component GO:0008278 cohesin complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0005047 signal recognition particle binding
molecular_function GO:0019901 protein kinase binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0042393 histone binding
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0019888 protein phosphatase regulator activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0030598 rRNA N-glycosylase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0004652 polynucleotide adenylyltransferase activity
molecular_function GO:0005488 binding
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0004849 uridine kinase activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0016853 isomerase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0008233 peptidase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0042578 phosphoric ester hydrolase activity
molecular_function GO:0016773 phosphotransferase activity, alcohol group as acceptor
molecular_function GO:0016307 phosphatidylinositol phosphate kinase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0004300 enoyl-CoA hydratase activity
molecular_function GO:0005496 steroid binding
molecular_function GO:0004714 transmembrane receptor protein tyrosine kinase activity
molecular_function GO:0003887 DNA-directed DNA polymerase activity
RNA-Seq Expression