Spo20055 (gene) | SpinachBase

Overview


Name	Spo20055
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Unknown protein
Location	chr4 : 92517378 .. 92518019 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGCCCTCTTTCACCACCGTAAGAATGATAATGAGGACAACCCCTCCGACGACTCCTCTGAAAACACCGGTTATGGCTCCACAAATGAAGGCAACCGCCTTCGCTCAGATAACACCACTGGTGGCTATGGAGAGACAGAAGGAAACCGCTATGGCTCGGAAAACAAAGCCTCTGGAGGCTATGGAGAGACCGAAGGCAACCGCGATGGCTCATCAGACTTCACCGCCGCCACCGGTGGTGGTGGCTATGGCTCCACTGAGACTACCCGTTACGGTGACTCAGAGACAAAGAAGTATGGAGAGGAAGGTGGAGGGTACGGTGACTCGGAGACAAAGAAGTATGGAGAGGAAGGTGGTGGTTATGGTGACTCGGAAACGAAGAAGTATGGAGAGGAAGGTGGTGGTTATGGTGGATCGGAGACGAACAAGTATGGAGAGGAAGGTGGAGGGTATGGTGACTCGGAGACAAAGAAGTATGGAGAAGAAGGTGGTGGTTATGGTGGCTCGGAGACAGACAAGTATGGAGAGGAAGGTGGTACTGGTGGTACTGGTGGTTATGGTGACTCAGAGACGAAACGGTACGGAGAGGAAGAAGGTGGTACTGGTGGCTATGGTGACTCGGAGACCAAGAGGTATTGA

mRNA sequence

ATGGACGCCCTCTTTCACCACCGTAAGAATGATAATGAGGACAACCCCTCCGACGACTCCTCTGAAAACACCGGTTATGGCTCCACAAATGAAGGCAACCGCCTTCGCTCAGATAACACCACTGGTGGCTATGGAGAGACAGAAGGAAACCGCTATGGCTCGGAAAACAAAGCCTCTGGAGGCTATGGAGAGACCGAAGGCAACCGCGATGGCTCATCAGACTTCACCGCCGCCACCGGTGGTGGTGGCTATGGCTCCACTGAGACTACCCGTTACGGTGACTCAGAGACAAAGAAGTATGGAGAGGAAGGTGGAGGGTACGGTGACTCGGAGACAAAGAAGTATGGAGAGGAAGGTGGTGGTTATGGTGACTCGGAAACGAAGAAGTATGGAGAGGAAGGTGGTGGTTATGGTGGATCGGAGACGAACAAGTATGGAGAGGAAGGTGGAGGGTATGGTGACTCGGAGACAAAGAAGTATGGAGAAGAAGGTGGTGGTTATGGTGGCTCGGAGACAGACAAGTATGGAGAGGAAGGTGGTACTGGTGGTACTGGTGGTTATGGTGACTCAGAGACGAAACGGTACGGAGAGGAAGAAGGTGGTACTGGTGGCTATGGTGACTCGGAGACCAAGAGGTATTGA

Coding sequence (CDS)

ATGGACGCCCTCTTTCACCACCGTAAGAATGATAATGAGGACAACCCCTCCGACGACTCCTCTGAAAACACCGGTTATGGCTCCACAAATGAAGGCAACCGCCTTCGCTCAGATAACACCACTGGTGGCTATGGAGAGACAGAAGGAAACCGCTATGGCTCGGAAAACAAAGCCTCTGGAGGCTATGGAGAGACCGAAGGCAACCGCGATGGCTCATCAGACTTCACCGCCGCCACCGGTGGTGGTGGCTATGGCTCCACTGAGACTACCCGTTACGGTGACTCAGAGACAAAGAAGTATGGAGAGGAAGGTGGAGGGTACGGTGACTCGGAGACAAAGAAGTATGGAGAGGAAGGTGGTGGTTATGGTGACTCGGAAACGAAGAAGTATGGAGAGGAAGGTGGTGGTTATGGTGGATCGGAGACGAACAAGTATGGAGAGGAAGGTGGAGGGTATGGTGACTCGGAGACAAAGAAGTATGGAGAAGAAGGTGGTGGTTATGGTGGCTCGGAGACAGACAAGTATGGAGAGGAAGGTGGTACTGGTGGTACTGGTGGTTATGGTGACTCAGAGACGAAACGGTACGGAGAGGAAGAAGGTGGTACTGGTGGCTATGGTGACTCGGAGACCAAGAGGTATTGA

Protein sequence

MDALFHHRKNDNEDNPSDDSSENTGYGSTNEGNRLRSDNTTGGYGETEGNRYGSENKASGGYGETEGNRDGSSDFTAATGGGGYGSTETTRYGDSETKKYGEEGGGYGDSETKKYGEEGGGYGDSETKKYGEEGGGYGGSETNKYGEEGGGYGDSETKKYGEEGGGYGGSETDKYGEEGGTGGTGGYGDSETKRYGEEEGGTGGYGDSETKRY

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo20055.1	Spo20055.1	mRNA

Homology

[Close]

BLAST of Spo20055.1 vs. NCBI nr
Match: gi|902239837|gb|KNA25756.1| (hypothetical protein SOVF_003930 [Spinacia oleracea])

HSP 1 Score: 387.5 bits (994), Expect = 1.500e-104
Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 1


		  
Query: 1   MDALFHHRKNDNEDNPSDDSSENTGYGSTNEGNRLRSDNTTGGYGETEGNRYGSENKASG 60
           MDALFHHRKNDNEDNPSDDSSENTGYGSTNEGNRL SDNTTGGYGETEGNRYGSENKASG
Sbjct: 1   MDALFHHRKNDNEDNPSDDSSENTGYGSTNEGNRLGSDNTTGGYGETEGNRYGSENKASG 60

Query: 61  GYGETEGNRDGSSDFTAATGGGGYGSTETTRYGDSETKKYGEEGGGYGDSETKKYGEEGG 120
           GYGETEGNRDGSSDFTAATGGGGYGSTETTRYGDSETKKYGEEGGGYGDSETKKYGEEGG
Sbjct: 61  GYGETEGNRDGSSDFTAATGGGGYGSTETTRYGDSETKKYGEEGGGYGDSETKKYGEEGG 120

Query: 121 GYGDSETKKYGEEGGGYGGSETNKYGEEGGGYGDSETKKYGEEGGGYGGSETDKYGEEGG 180
           GYGDSETKKYGEEGGGYGGSETNKYGEEGGGYGDSETKKYGEEGGGYGGSETDKYGEEGG
Sbjct: 121 GYGDSETKKYGEEGGGYGGSETNKYGEEGGGYGDSETKKYGEEGGGYGGSETDKYGEEGG 180

Query: 181 TGGTGGYGDSETKRYGEEEGGTGGYGDSETKRY 214
           TGGTGGYGDSETKRYGEEEGGTGGYGDSETKRY
Sbjct: 181 TGGTGGYGDSETKRYGEEEGGTGGYGDSETKRY 213

[Close]

BLAST of Spo20055.1 vs. NCBI nr
Match: gi|902239836|gb|KNA25755.1| (hypothetical protein SOVF_003920 [Spinacia oleracea])

HSP 1 Score: 120.6 bits (301), Expect = 3.400e-24
Identity = 110/232 (47.41%), Postives = 134/232 (57.76%), Query Frame = 1


		  
Query: 4   LFHHRKNDNEDNPSDDSSENTGYGSTNEGNRLRSDNTTGGYG-------------ETEGN 63
           LFHHRKND      D  S NTGYGST E NR  S++TTGGYG             ETEGN
Sbjct: 5   LFHHRKNDE-----DKLSGNTGYGST-EDNRYGSNDTTGGYGSNEGNRYGSGGYGETEGN 64

Query: 64  RYGSENKASGGYGETEGNRDGSSDFTAATGGGGYGSTETTRYGDSETKKYGEEGGGYGDS 123
           RYGS+NKA   YGETEGNR GS         GGYG TE  RYG           GGYG++
Sbjct: 65  RYGSDNKA---YGETEGNRYGS---------GGYGETEGNRYGS----------GGYGET 124

Query: 124 ETKKYGEEGGGYGDS-ETKKYG---EEGGGYGGSETNKYGEEGGGYGDSETKKYGEE--- 183
           E  +YG   GGYG++ E K+YG   +  GGYG +E N++G +   YG+++  +YG     
Sbjct: 125 EGNRYGS--GGYGETTEGKRYGSGNKPSGGYGETEGNRFGFDNKAYGETKDNRYGSSDYN 184

Query: 184 -----GGGYGGSETDKYGEEGGTGGTGGYGDSETKRYGEEEGGTGGYGDSET 211
                GGGYG SE  +YG +  TG  GGYG+SE K YGE+    GGY +SE+
Sbjct: 185 SATGGGGGYGSSEATRYGSDNTTGSGGGYGESEPKVYGEK----GGYKNSES 202

[Close]

BLAST of Spo20055.1 vs. NCBI nr
Match: gi|731313574|ref|XP_010680902.1| (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 104.4 bits (259), Expect = 2.600e-19
Identity = 107/217 (49.31%), Postives = 121/217 (55.76%), Query Frame = 1


		  
Query: 4   LFHHRKNDNEDNPSDDSSENTG--YGSTNEGNRLRSD-NTTGGYGETEGNRYGSENKASG 63
           LFHH KND  +    D SENTG  YGST EG R  SD NT GGYG TEGNRYGS+   +G
Sbjct: 5   LFHHHKND--EGKHSDYSENTGGGYGST-EGPRYGSDYNTGGGYGSTEGNRYGSDYNTTG 64

Query: 64  GYGETEGNRDGSSDFTAATGGGGYGSTETTRYGDSETKKYGEEGGGYGDSETKKYGEEGG 123
           G    EGNR GS D+  ATGGG YGSTE  RY           GGGYG +E  +YG    
Sbjct: 65  G----EGNRYGS-DYNTATGGG-YGSTEGNRYASDYNTA---TGGGYGSTEGNRYGS--- 124

Query: 124 GYGDSETKKYGEEGGGYGGSETNKYGEEGGGYGDSETKKYGEEGGGYGGSETDKYGEEGG 183
              D   K  GE  GGYG +  N+YG       D   K  GE  GGYG +E ++YG +  
Sbjct: 125 ---DYNYKAPGE--GGYGSTGGNRYGS------DYNYKAPGE--GGYGSTEGNRYGSDYN 184

Query: 184 TGGTGGYGDSETKRYGEE----EGGTGGYGDSETKRY 214
           T   GGYG +E  RYG +     GG GGYG SETK Y
Sbjct: 185 TATGGGYGSTEGDRYGSDYDKTGGGVGGYGPSETKGY 193

[Close]

BLAST of Spo20055.1 vs. NCBI nr
Match: gi|731313572|ref|XP_010680894.1| (PREDICTED: uncharacterized protein At5g39570-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 85.9 bits (211), Expect = 9.400e-14
Identity = 87/171 (50.88%), Postives = 98/171 (57.31%), Query Frame = 1


		  
Query: 4   LFHHRKNDNEDNPSDDSSENTGYGSTNEGNRLRSDNTTGGYGETEGNRYGSENKASGG-Y 63
           LFHHRKND ED PSD  SE TG                GGYG TEG+RYGSEN  +GG Y
Sbjct: 5   LFHHRKND-EDKPSD-YSETTG----------------GGYGTTEGDRYGSENTTTGGGY 64

Query: 64  GETEGNRDGSSDFTAATGGGGYGSTETTRYGDSETKKYGEEGGGYGDSETKKYGEEGGGY 123
           G TEGNR GS D T    GGGYG           T+ Y +  GGYGD+E     +EG  Y
Sbjct: 65  GSTEGNRYGSDDTT----GGGYG-----------TESY-KTSGGYGDTE-----KEGNRY 124

Query: 124 GDSE---TKKYGEEGGGYGGSETNKYGEE----GGGYGDSETK-KYGEEGG 166
           G S+   T   G  GGGYG +ET++YG +    GG YGDSETK  YGEEGG
Sbjct: 125 GSSDYNTTTGGGGVGGGYGSTETDRYGSDTAVGGGKYGDSETKVGYGEEGG 136

[Close]

BLAST of Spo20055.1 vs. NCBI nr
Match: gi|555948270|gb|AGZ20206.1| (abscisic acid stress ripening-related protein [Suaeda liaotungensis])

HSP 1 Score: 76.3 bits (186), Expect = 7.400e-11
Identity = 85/175 (48.57%), Postives = 96/175 (54.86%), Query Frame = 1


		  
Query: 43  GYGETEGNRYGSENKASGGYGETEGNRDGSSDFTAATGGGGYGSTETTRYGDSETKKYGE 102
           GYGE  G RYGS    +G YG   G              GGYGSTETTRYG +ET +YG 
Sbjct: 4   GYGE--GERYGSNE--AGRYGSETG--------------GGYGSTETTRYGSTETGEYGA 63

Query: 103 EGGGYGDSETKKYGEEGGGYGDSETKKYGEEGGGYGGSETNKYGEEGGGY-GDSETKKYG 162
            GGGYG              GDSE   Y   GGGYGG    K    GGGY G+SE K  G
Sbjct: 64  TGGGYG--------------GDSE---YKTSGGGYGGESEYKSSGGGGGYGGESEYKTSG 123

Query: 163 EEGGGYGGSETD--KYG--EEGGTGGTGGYGDSETKRYGEEEGG---TGGYGDSE 210
             GGGYGG E++  +YG  E GG  G GGYG+SETKRYGE+E G   + G  +SE
Sbjct: 124 GGGGGYGGDESEGKRYGSSEYGGATG-GGYGESETKRYGEDEEGYKKSSGSDESE 142

[Close]

BLAST of Spo20055.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S1Y2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_003930 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.100e-104
Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 1


		  
Query: 1   MDALFHHRKNDNEDNPSDDSSENTGYGSTNEGNRLRSDNTTGGYGETEGNRYGSENKASG 60
           MDALFHHRKNDNEDNPSDDSSENTGYGSTNEGNRL SDNTTGGYGETEGNRYGSENKASG
Sbjct: 1   MDALFHHRKNDNEDNPSDDSSENTGYGSTNEGNRLGSDNTTGGYGETEGNRYGSENKASG 60

Query: 61  GYGETEGNRDGSSDFTAATGGGGYGSTETTRYGDSETKKYGEEGGGYGDSETKKYGEEGG 120
           GYGETEGNRDGSSDFTAATGGGGYGSTETTRYGDSETKKYGEEGGGYGDSETKKYGEEGG
Sbjct: 61  GYGETEGNRDGSSDFTAATGGGGYGSTETTRYGDSETKKYGEEGGGYGDSETKKYGEEGG 120

Query: 121 GYGDSETKKYGEEGGGYGGSETNKYGEEGGGYGDSETKKYGEEGGGYGGSETDKYGEEGG 180
           GYGDSETKKYGEEGGGYGGSETNKYGEEGGGYGDSETKKYGEEGGGYGGSETDKYGEEGG
Sbjct: 121 GYGDSETKKYGEEGGGYGGSETNKYGEEGGGYGDSETKKYGEEGGGYGGSETDKYGEEGG 180

Query: 181 TGGTGGYGDSETKRYGEEEGGTGGYGDSETKRY 214
           TGGTGGYGDSETKRYGEEEGGTGGYGDSETKRY
Sbjct: 181 TGGTGGYGDSETKRYGEEEGGTGGYGDSETKRY 213

[Close]

BLAST of Spo20055.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S1X6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_003920 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.400e-24
Identity = 110/232 (47.41%), Postives = 134/232 (57.76%), Query Frame = 1


		  
Query: 4   LFHHRKNDNEDNPSDDSSENTGYGSTNEGNRLRSDNTTGGYG-------------ETEGN 63
           LFHHRKND      D  S NTGYGST E NR  S++TTGGYG             ETEGN
Sbjct: 5   LFHHRKNDE-----DKLSGNTGYGST-EDNRYGSNDTTGGYGSNEGNRYGSGGYGETEGN 64

Query: 64  RYGSENKASGGYGETEGNRDGSSDFTAATGGGGYGSTETTRYGDSETKKYGEEGGGYGDS 123
           RYGS+NKA   YGETEGNR GS         GGYG TE  RYG           GGYG++
Sbjct: 65  RYGSDNKA---YGETEGNRYGS---------GGYGETEGNRYGS----------GGYGET 124

Query: 124 ETKKYGEEGGGYGDS-ETKKYG---EEGGGYGGSETNKYGEEGGGYGDSETKKYGEE--- 183
           E  +YG   GGYG++ E K+YG   +  GGYG +E N++G +   YG+++  +YG     
Sbjct: 125 EGNRYGS--GGYGETTEGKRYGSGNKPSGGYGETEGNRFGFDNKAYGETKDNRYGSSDYN 184

Query: 184 -----GGGYGGSETDKYGEEGGTGGTGGYGDSETKRYGEEEGGTGGYGDSET 211
                GGGYG SE  +YG +  TG  GGYG+SE K YGE+    GGY +SE+
Sbjct: 185 SATGGGGGYGSSEATRYGSDNTTGSGGGYGESEPKVYGEK----GGYKNSES 202

[Close]

BLAST of Spo20055.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D5G7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g011780 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.800e-19
Identity = 107/217 (49.31%), Postives = 121/217 (55.76%), Query Frame = 1


		  
Query: 4   LFHHRKNDNEDNPSDDSSENTG--YGSTNEGNRLRSD-NTTGGYGETEGNRYGSENKASG 63
           LFHH KND  +    D SENTG  YGST EG R  SD NT GGYG TEGNRYGS+   +G
Sbjct: 5   LFHHHKND--EGKHSDYSENTGGGYGST-EGPRYGSDYNTGGGYGSTEGNRYGSDYNTTG 64

Query: 64  GYGETEGNRDGSSDFTAATGGGGYGSTETTRYGDSETKKYGEEGGGYGDSETKKYGEEGG 123
           G    EGNR GS D+  ATGGG YGSTE  RY           GGGYG +E  +YG    
Sbjct: 65  G----EGNRYGS-DYNTATGGG-YGSTEGNRYASDYNTA---TGGGYGSTEGNRYGS--- 124

Query: 124 GYGDSETKKYGEEGGGYGGSETNKYGEEGGGYGDSETKKYGEEGGGYGGSETDKYGEEGG 183
              D   K  GE  GGYG +  N+YG       D   K  GE  GGYG +E ++YG +  
Sbjct: 125 ---DYNYKAPGE--GGYGSTGGNRYGS------DYNYKAPGE--GGYGSTEGNRYGSDYN 184

Query: 184 TGGTGGYGDSETKRYGEE----EGGTGGYGDSETKRY 214
           T   GGYG +E  RYG +     GG GGYG SETK Y
Sbjct: 185 TATGGGYGSTEGDRYGSDYDKTGGGVGGYGPSETKGY 193

[Close]

BLAST of Spo20055.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D5U9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g011770 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 6.500e-14
Identity = 87/171 (50.88%), Postives = 98/171 (57.31%), Query Frame = 1


		  
Query: 4   LFHHRKNDNEDNPSDDSSENTGYGSTNEGNRLRSDNTTGGYGETEGNRYGSENKASGG-Y 63
           LFHHRKND ED PSD  SE TG                GGYG TEG+RYGSEN  +GG Y
Sbjct: 5   LFHHRKND-EDKPSD-YSETTG----------------GGYGTTEGDRYGSENTTTGGGY 64

Query: 64  GETEGNRDGSSDFTAATGGGGYGSTETTRYGDSETKKYGEEGGGYGDSETKKYGEEGGGY 123
           G TEGNR GS D T    GGGYG           T+ Y +  GGYGD+E     +EG  Y
Sbjct: 65  GSTEGNRYGSDDTT----GGGYG-----------TESY-KTSGGYGDTE-----KEGNRY 124

Query: 124 GDSE---TKKYGEEGGGYGGSETNKYGEE----GGGYGDSETK-KYGEEGG 166
           G S+   T   G  GGGYG +ET++YG +    GG YGDSETK  YGEEGG
Sbjct: 125 GSSDYNTTTGGGGVGGGYGSTETDRYGSDTAVGGGKYGDSETKVGYGEEGG 136

[Close]

BLAST of Spo20055.1 vs. UniProtKB/TrEMBL
Match: A0A059SPX5_9CARY (Abscisic acid stress ripening-related protein OS=Suaeda liaotungensis GN=ASR PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.200e-11
Identity = 85/175 (48.57%), Postives = 96/175 (54.86%), Query Frame = 1


		  
Query: 43  GYGETEGNRYGSENKASGGYGETEGNRDGSSDFTAATGGGGYGSTETTRYGDSETKKYGE 102
           GYGE  G RYGS    +G YG   G              GGYGSTETTRYG +ET +YG 
Sbjct: 4   GYGE--GERYGSNE--AGRYGSETG--------------GGYGSTETTRYGSTETGEYGA 63

Query: 103 EGGGYGDSETKKYGEEGGGYGDSETKKYGEEGGGYGGSETNKYGEEGGGY-GDSETKKYG 162
            GGGYG              GDSE   Y   GGGYGG    K    GGGY G+SE K  G
Sbjct: 64  TGGGYG--------------GDSE---YKTSGGGYGGESEYKSSGGGGGYGGESEYKTSG 123

Query: 163 EEGGGYGGSETD--KYG--EEGGTGGTGGYGDSETKRYGEEEGG---TGGYGDSE 210
             GGGYGG E++  +YG  E GG  G GGYG+SETKRYGE+E G   + G  +SE
Sbjct: 124 GGGGGYGGDESEGKRYGSSEYGGATG-GGYGESETKRYGEDEEGYKKSSGSDESE 142

The following BLAST results are available for this feature:

BLAST of Spo20055.1 vs. NCBI nr
BLAST of Spo20055.1 vs. UniProtKB/TrEMBL
BLAST of Spo20055.1 vs. ExPASy Swiss-Prot
BLAST of Spo20055.1 vs. TAIR (Arabidopsis)

BLAST of Spo20055.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902239837\|gb\|KNA25756.1\|	1.5e-104	99.5	hypothetical protein SOVF_0039...	[more]
gi\|902239836\|gb\|KNA25755.1\|	3.4e-24	47.4	hypothetical protein SOVF_0039...	[more]
gi\|731313574\|ref\|XP_010680902.1\|	2.6e-19	49.3	PREDICTED: glycine-rich cell w...	[more]
gi\|731313572\|ref\|XP_010680894.1\|	9.4e-14	50.8	PREDICTED: uncharacterized pro...	[more]
gi\|555948270\|gb\|AGZ20206.1\|	7.4e-11	48.5	abscisic acid stress ripening-...	[more]

BLAST of Spo20055.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9S1Y2_SPIOL	1.1e-104	99.5	Uncharacterized protein OS=Spi...	[more]
A0A0K9S1X6_SPIOL	2.4e-24	47.4	Uncharacterized protein OS=Spi...	[more]
A0A0J8D5G7_BETVU	1.8e-19	49.3	Uncharacterized protein OS=Bet...	[more]
A0A0J8D5U9_BETVU	6.5e-14	50.8	Uncharacterized protein OS=Bet...	[more]
A0A059SPX5_9CARY	5.2e-11	48.5	Abscisic acid stress ripening-...	[more]

BLAST of Spo20055.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo20055.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0


Match Name	E-value	Identity	Description

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016573	histone acetylation
biological_process	GO:0097031	obsolete mitochondrial respiratory chain complex I biogenesis
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0008643	carbohydrate transport
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0042128	nitrate assimilation
biological_process	GO:0016310	phosphorylation
biological_process	GO:0010048	vernalization response
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0097034	obsolete mitochondrial respiratory chain complex IV biogenesis
biological_process	GO:0000956	nuclear-transcribed mRNA catabolic process
biological_process	GO:0006397	mRNA processing
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0006508	proteolysis
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0006811	ion transport
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0016311	dephosphorylation
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0009505	plant-type cell wall
cellular_component	GO:0016020	membrane
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0000123	histone acetyltransferase complex
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004402	histone acetyltransferase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0003712	transcription coregulator activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004197	cysteine-type endopeptidase activity
molecular_function	GO:0008253	5'-nucleotidase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0022857	transmembrane transporter activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo08785	0.73	Barchart \| Table
Spo26544	0.72	Barchart \| Table
Spo00358	0.71	Barchart \| Table
Spo19267	0.70	Barchart \| Table
Spo03882	0.69	Barchart \| Table
Spo19773	0.69	Barchart \| Table
Spo10296	0.68	Barchart \| Table
Spo11035	0.68	Barchart \| Table
Spo23690	0.68	Barchart \| Table
Spo01384	0.67	Barchart \| Table
Spo12054	0.67	Barchart \| Table
Spo25886	0.67	Barchart \| Table
Spo00400	0.66	Barchart \| Table
Spo09802	0.66	Barchart \| Table
Spo17217	0.66	Barchart \| Table
Spo18235	0.66	Barchart \| Table
Spo19268	0.66	Barchart \| Table
Spo22323	0.66	Barchart \| Table
Spo18907	0.65	Barchart \| Table
Spo14523	0.65	Barchart \| Table
Spo08783	0.65	Barchart \| Table