Spo20215 (gene)

Overview
NameSpo20215
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionATP synthase subunit alpha, chloroplastic (3.6.3.14) (ATP synthase F1 sector subunit alpha) (F-ATPase subunit alpha)
Locationchr2 : 17639690 .. 17640094 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCTTCTATTACGAAGACCACCTGGACGTGAAGCTTATTCGGGAGATGTTTTTTATTTGCATTCACGACTTTTGGAAAGAGCCGCTAAATTAAGTTCTCTTTTAGGTGAAGGAAGTATGGCCGCTTTACCAATAGTCGAGACCCAAGCAGGAGATGTTTCGGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGACAAATATTCTTATCCGCCGATCTATTCAATGCTGGAATCAGACCGGCTATTAATGTGGGTATTTCTGTTTCTCGGGTAGGATCTGCGGCTCAAATTAAAGCCATGAAAAAAGTAGCTGGTAAATTAAAATTGGAACTGGCGCAATTTGCAGAATTAGAAGCCTTTGCACAATTTGCTTCTGATCTTGATAAAGCTACTTAG

mRNA sequence

ATGTCTCTTCTATTACGAAGACCACCTGGACGTGAAGCTTATTCGGGAGATGTTTTTTATTTGCATTCACGACTTTTGGAAAGAGCCGCTAAATTAAGTTCTCTTTTAGGTGAAGGAAGTATGGCCGCTTTACCAATAGTCGAGACCCAAGCAGGAGATGTTTCGGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGACAAATATTCTTATCCGCCGATCTATTCAATGCTGGAATCAGACCGGCTATTAATGTGGGTATTTCTGTTTCTCGGGTAGGATCTGCGGCTCAAATTAAAGCCATGAAAAAAGTAGCTGGTAAATTAAAATTGGAACTGGCGCAATTTGCAGAATTAGAAGCCTTTGCACAATTTGCTTCTGATCTTGATAAAGCTACTTAG

Coding sequence (CDS)

ATGTCTCTTCTATTACGAAGACCACCTGGACGTGAAGCTTATTCGGGAGATGTTTTTTATTTGCATTCACGACTTTTGGAAAGAGCCGCTAAATTAAGTTCTCTTTTAGGTGAAGGAAGTATGGCCGCTTTACCAATAGTCGAGACCCAAGCAGGAGATGTTTCGGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGACAAATATTCTTATCCGCCGATCTATTCAATGCTGGAATCAGACCGGCTATTAATGTGGGTATTTCTGTTTCTCGGGTAGGATCTGCGGCTCAAATTAAAGCCATGAAAAAAGTAGCTGGTAAATTAAAATTGGAACTGGCGCAATTTGCAGAATTAGAAGCCTTTGCACAATTTGCTTCTGATCTTGATAAAGCTACTTAG

Protein sequence

MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAELEAFAQFASDLDKAT
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo20215.1Spo20215.1mRNA


Homology
[Close]
BLAST of Spo20215.1 vs. NCBI nr
Match: gi|7636090|emb|CAB88710.1| (ATPase subunit I (chloroplast) [Spinacia oleracea])

HSP 1 Score: 246.5 bits (628), Expect = 2.600e-62
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQAGDVSAYIPT
Sbjct: 198 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQAGDVSAYIPT 257

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL
Sbjct: 258 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 317

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 318 EAFAQFASDLDKAT 331
[Close]
BLAST of Spo20215.1 vs. NCBI nr
Match: gi|126022791|ref|NP_054917.2| (ATP synthase CF1 alpha subunit [Spinacia oleracea])

HSP 1 Score: 246.5 bits (628), Expect = 2.600e-62
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQAGDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQAGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. NCBI nr
Match: gi|748993908|gb|AJE74311.1| (ATP synthase CF1 alpha subunit (plastid) [Thelesperma filifolium])

HSP 1 Score: 245.4 bits (625), Expect = 5.800e-62
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQ+GDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQSGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. NCBI nr
Match: gi|748992830|gb|AJE73247.1| (ATP synthase CF1 alpha subunit (plastid) [Bidens aristosa])

HSP 1 Score: 245.4 bits (625), Expect = 5.800e-62
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQ+GDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQSGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. NCBI nr
Match: gi|352950895|ref|YP_004891199.1| (ATP synthase CF1 alpha chain (chloroplast) [Larix decidua])

HSP 1 Score: 245.0 bits (624), Expect = 7.600e-62
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGS+ ALPIVETQAGDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSVTALPIVETQAGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. UniProtKB/TrEMBL
Match: A0A0K0LY69_9ASTR (ATP synthase subunit alpha OS=Bidens aristosa GN=atpA PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 4.100e-62
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQ+GDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQSGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. UniProtKB/TrEMBL
Match: A0A0K0M1V3_9ASTR (ATP synthase subunit alpha OS=Thelesperma filifolium GN=atpA PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 4.100e-62
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQ+GDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQSGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. UniProtKB/TrEMBL
Match: C3W1R3_LAROX (ATP synthase subunit alpha, chloroplastic OS=Larix occidentalis GN=atpA PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.300e-62
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGS+ ALPIVETQAGDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSVTALPIVETQAGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. UniProtKB/TrEMBL
Match: L7NQ03_9ASTR (ATP synthase subunit alpha, chloroplastic OS=Chrysanthemum indicum GN=atpA PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.300e-62
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQAGDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQAGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMK+VAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. UniProtKB/TrEMBL
Match: E1CH22_LARDC (ATP synthase subunit alpha, chloroplastic OS=Larix decidua GN=atpA PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.300e-62
Identity = 131/134 (97.76%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGS+ ALPIVETQAGDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSVTALPIVETQAGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. ExPASy Swiss-Prot
Match: ATPA_SPIOL (ATP synthase subunit alpha, chloroplastic OS=Spinacia oleracea GN=atpA PE=1 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 1.600e-64
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQAGDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQAGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. ExPASy Swiss-Prot
Match: ATPA_EUCGG (ATP synthase subunit alpha, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=atpA PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.100e-63
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQ+GDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQSGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMK+VAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. ExPASy Swiss-Prot
Match: ATPA_LACSA (ATP synthase subunit alpha, chloroplastic OS=Lactuca sativa GN=atpA PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.100e-63
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQ+GDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQSGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMK+VAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. ExPASy Swiss-Prot
Match: ATPA_HELAN (ATP synthase subunit alpha, chloroplastic OS=Helianthus annuus GN=atpA PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.100e-63
Identity = 130/134 (97.01%), Postives = 132/134 (98.51%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSSLLGEGSM ALPIVETQ+GDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQSGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMK+VAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 394 EAFAQFASDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. ExPASy Swiss-Prot
Match: ATPA_CHAVU (ATP synthase subunit alpha, chloroplastic OS=Chara vulgaris GN=atpA PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.400e-63
Identity = 130/134 (97.01%), Postives = 131/134 (97.76%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSS LGEGSM ALPIVETQAGDVSAYIPT
Sbjct: 277 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQAGDVSAYIPT 336

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMK+VAGKLKLELAQFAEL
Sbjct: 337 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAEL 396

Query: 121 EAFAQFASDLDKAT 135
           EAFAQFASDLDKAT
Sbjct: 397 EAFAQFASDLDKAT 410
[Close]
BLAST of Spo20215.1 vs. TAIR (Arabidopsis)
Match: ATCG00120.1 (ATP synthase subunit alpha)

HSP 1 Score: 239.2 bits (609), Expect = 1.500e-63
Identity = 127/134 (94.78%), Postives = 131/134 (97.76%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREAY GDVFYLHSRLLERAAKLSS LGEGSM ALPIVETQ+GDVSAYIPT
Sbjct: 274 MSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQSGDVSAYIPT 333

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMK+VAGKLKLELAQFAEL
Sbjct: 334 NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAEL 393

Query: 121 EAFAQFASDLDKAT 135
           EAF+QF+SDLDKAT
Sbjct: 394 EAFSQFSSDLDKAT 407
[Close]
BLAST of Spo20215.1 vs. TAIR (Arabidopsis)
Match: AT2G07698.1 (ATPase, F1 complex, alpha subunit protein)

HSP 1 Score: 200.7 bits (509), Expect = 5.800e-52
Identity = 105/134 (78.36%), Postives = 115/134 (85.82%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREA+ GDVFYLHSRLLERAAK S   G GS+ ALP++ETQAGDVSAYIPT
Sbjct: 554 MSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPT 613

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQI L  +LF  GIRPAINVG+SVSRVGSAAQ+KAMK+V G  KLELAQ+ E+
Sbjct: 614 NVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYREV 673

Query: 121 EAFAQFASDLDKAT 135
            AFAQF SDLD AT
Sbjct: 674 AAFAQFGSDLDAAT 687
[Close]
BLAST of Spo20215.1 vs. TAIR (Arabidopsis)
Match: ATMG01190.1 (ATP synthase subunit 1)

HSP 1 Score: 200.7 bits (509), Expect = 5.800e-52
Identity = 105/134 (78.36%), Postives = 115/134 (85.82%), Query Frame = 1 

		  

Query: 1   MSLLLRRPPGREAYSGDVFYLHSRLLERAAKLSSLLGEGSMAALPIVETQAGDVSAYIPT 60
           MSLLLRRPPGREA+ GDVFYLHSRLLERAAK S   G GS+ ALP++ETQAGDVSAYIPT
Sbjct: 284 MSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPT 343

Query: 61  NVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKKVAGKLKLELAQFAEL 120
           NVISITDGQI L  +LF  GIRPAINVG+SVSRVGSAAQ+KAMK+V G  KLELAQ+ E+
Sbjct: 344 NVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYREV 403

Query: 121 EAFAQFASDLDKAT 135
            AFAQF SDLD AT
Sbjct: 404 AAFAQFGSDLDAAT 417
The following BLAST results are available for this feature:
BLAST of Spo20215.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|7636090|emb|CAB88710.1|2.6e-6298.5ATPase subunit I (chloroplast)... [more]
gi|126022791|ref|NP_054917.2|2.6e-6298.5ATP synthase CF1 alpha subunit... [more]
gi|748993908|gb|AJE74311.1|5.8e-6297.7ATP synthase CF1 alpha subunit... [more]
gi|748992830|gb|AJE73247.1|5.8e-6297.7ATP synthase CF1 alpha subunit... [more]
gi|352950895|ref|YP_004891199.1|7.6e-6297.7ATP synthase CF1 alpha chain (... [more]
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BLAST of Spo20215.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K0LY69_9ASTR4.1e-6297.7ATP synthase subunit alpha OS=... [more]
A0A0K0M1V3_9ASTR4.1e-6297.7ATP synthase subunit alpha OS=... [more]
C3W1R3_LAROX5.3e-6297.7ATP synthase subunit alpha, ch... [more]
L7NQ03_9ASTR5.3e-6297.7ATP synthase subunit alpha, ch... [more]
E1CH22_LARDC5.3e-6297.7ATP synthase subunit alpha, ch... [more]
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BLAST of Spo20215.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ATPA_SPIOL1.6e-6498.5ATP synthase subunit alpha, ch... [more]
ATPA_EUCGG1.1e-6397.0ATP synthase subunit alpha, ch... [more]
ATPA_LACSA1.1e-6397.0ATP synthase subunit alpha, ch... [more]
ATPA_HELAN1.1e-6397.0ATP synthase subunit alpha, ch... [more]
ATPA_CHAVU2.4e-6397.0ATP synthase subunit alpha, ch... [more]
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BLAST of Spo20215.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
ATCG00120.11.5e-6394.7ATP synthase subunit alpha[more]
AT2G07698.15.8e-5278.3ATPase, F1 complex, alpha subu... [more]
ATMG01190.15.8e-5278.3ATP synthase subunit 1[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainPFAMPF00006ATP-synt_abcoord: 1..92
score: 7.1
IPR000793ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminalPFAMPF00306ATP-synt_ab_Ccoord: 99..134
score: 5.6
IPR000793ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminalunknownSSF47917C-terminal domain of alpha and beta subunits of F1 ATP synthasecoord: 100..134
score: 6.8
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active sitePROSITEPS00152ATPASE_ALPHA_BETAcoord: 83..92
scor
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..99
score: 6.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..98
score: 1.06
NoneNo IPR availableGENE3D1.20.150.20coord: 100..134
score: 3.1
NoneNo IPR availablePANTHERPTHR15184ATP SYNTHASEcoord: 1..134
score: 1.3E
NoneNo IPR availablePANTHERPTHR15184:SF42ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTICcoord: 1..134
score: 1.3E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0042545 cell wall modification
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0009873 ethylene-activated signaling pathway
biological_process GO:0010014 meristem initiation
biological_process GO:0010073 meristem maintenance
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0006771 riboflavin metabolic process
biological_process GO:0016567 protein ubiquitination
biological_process GO:0010364 regulation of ethylene biosynthetic process
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0010050 vegetative phase change
biological_process GO:0009616 virus induced gene silencing
biological_process GO:0006508 proteolysis
biological_process GO:0007267 cell-cell signaling
biological_process GO:0019497 hexachlorocyclohexane metabolic process
biological_process GO:0009719 response to endogenous stimulus
biological_process GO:0033036 macromolecule localization
biological_process GO:0009987 cellular process
biological_process GO:0043412 macromolecule modification
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0006893 Golgi to plasma membrane transport
biological_process GO:0044237 cellular metabolic process
biological_process GO:0010467 gene expression
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0016311 dephosphorylation
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0071702 organic substance transport
biological_process GO:0044238 primary metabolic process
biological_process GO:0050794 regulation of cellular process
biological_process GO:0050793 regulation of developmental process
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0048731 system development
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0010033 response to organic substance
biological_process GO:0006298 mismatch repair
biological_process GO:0009932 cell tip growth
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0015979 photosynthesis
biological_process GO:0010020 chloroplast fission
biological_process GO:0016559 peroxisome fission
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0006499 N-terminal protein myristoylation
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0006486 protein glycosylation
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0007165 signal transduction
biological_process GO:0006397 mRNA processing
biological_process GO:0006887 exocytosis
biological_process GO:0006780 uroporphyrinogen III biosynthetic process
biological_process GO:1901700 response to oxygen-containing compound
biological_process GO:0043069 negative regulation of programmed cell death
biological_process GO:0052542 defense response by callose deposition
biological_process GO:0042742 defense response to bacterium
biological_process GO:0050832 defense response to fungus
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0000165 MAPK cascade
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0006782 protoporphyrinogen IX biosynthetic process
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0010337 regulation of salicylic acid metabolic process
biological_process GO:0002679 respiratory burst involved in defense response
biological_process GO:0010200 response to chitin
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0065007 biological regulation
biological_process GO:0050896 response to stimulus
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0030154 cell differentiation
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005982 starch metabolic process
biological_process GO:0006075 (1->3)-beta-D-glucan biosynthetic process
biological_process GO:0006857 oligopeptide transport
biological_process GO:0006810 transport
biological_process GO:0008152 metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process GO:0000186 activation of MAPKK activity
biological_process GO:0006909 phagocytosis
biological_process GO:0008643 carbohydrate transport
biological_process GO:0009790 embryo development
biological_process GO:0051301 cell division
biological_process GO:0055085 transmembrane transport
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0032502 developmental process
biological_process GO:0006546 glycine catabolic process
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0019748 secondary metabolic process
biological_process GO:0009249 protein lipoylation
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006733 oxidoreduction coenzyme metabolic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0009107 lipoate biosynthetic process
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0009695 jasmonic acid biosynthetic process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009707 chloroplast outer membrane
cellular_component GO:0005777 peroxisome
cellular_component GO:0031361 integral component of thylakoid membrane
cellular_component GO:0000785 chromatin
cellular_component GO:0005829 cytosol
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component GO:0005634 nucleus
cellular_component GO:0009524 phragmoplast
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain
cellular_component GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component GO:0005856 cytoskeleton
cellular_component GO:0000159 protein phosphatase type 2A complex
cellular_component GO:0000148 1,3-beta-D-glucan synthase complex
cellular_component GO:0000145 exocyst
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0005643 nuclear pore
cellular_component GO:0005768 endosome
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0030659 cytoplasmic vesicle membrane
cellular_component GO:0055029 nuclear DNA-directed RNA polymerase complex
cellular_component GO:0005730 nucleolus
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0005488 binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
molecular_function GO:0019706 protein-cysteine S-palmitoyltransferase activity
molecular_function GO:0042802 identical protein binding
molecular_function GO:0000035 acyl binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0019888 protein phosphatase regulator activity
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016992 lipoate synthase activity
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0003993 acid phosphatase activity
molecular_function GO:0052826 inositol hexakisphosphate 2-phosphatase activity
molecular_function GO:0003843 1,3-beta-D-glucan synthase activity
molecular_function GO:0035673 oligopeptide transmembrane transporter activity
molecular_function GO:0008233 peptidase activity
molecular_function GO:0004185 serine-type carboxypeptidase activity
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0016746 transferase activity, transferring acyl groups
molecular_function GO:0020037 heme binding
molecular_function GO:0004709 MAP kinase kinase kinase activity
molecular_function GO:0030983 mismatched DNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
molecular_function GO:0004852 uroporphyrinogen-III synthase activity
molecular_function GO:0008236 serine-type peptidase activity
molecular_function GO:0003950 NAD+ ADP-ribosyltransferase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0004714 transmembrane receptor protein tyrosine kinase activity
molecular_function GO:0005351 carbohydrate:proton symporter activity
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0003676 nucleic acid binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo168950.74Barchart | Table
Spo122010.73Barchart | Table
Spo060410.73Barchart | Table
Spo229060.72Barchart | Table
Spo272260.72Barchart | Table
Spo021840.72Barchart | Table
Spo229700.72Barchart | Table
Spo119190.72Barchart | Table
Spo235070.71Barchart | Table
Spo267060.71Barchart | Table
Spo071990.71Barchart | Table
Spo060180.71Barchart | Table
Spo179260.70Barchart | Table
Spo247060.70Barchart | Table
Spo092600.69Barchart | Table
Spo179400.69Barchart | Table
Spo261900.69Barchart | Table
Spo060300.69Barchart | Table
Spo057060.69Barchart | Table
Spo152700.69Barchart | Table
Spo054870.69Barchart | Table
Spo146610.69Barchart | Table
Spo019980.69Barchart | Table
Spo237170.68Barchart | Table
Spo164210.68Barchart | Table
Spo036080.68Barchart | Table
Spo040850.68Barchart | Table
Spo048650.68Barchart | Table
Spo013560.68Barchart | Table
Spo055570.68Barchart | Table
Spo084080.68Barchart | Table
Spo092660.68Barchart | Table
Spo104270.68Barchart | Table
Spo113550.68Barchart | Table
Spo169190.67Barchart | Table
Spo015160.67Barchart | Table
Spo091110.67Barchart | Table
Spo027740.67Barchart | Table
Spo248610.67Barchart | Table
Spo254970.67Barchart | Table
Spo027310.67Barchart | Table
Spo109690.67Barchart | Table
Spo159110.67Barchart | Table
Spo234340.67Barchart | Table
Spo069620.67Barchart | Table
Spo010690.67Barchart | Table
Spo013970.67Barchart | Table
Spo237510.66Barchart | Table
Spo003970.66Barchart | Table
Spo006940.66Barchart | Table
Spo007230.66Barchart | Table
Spo028180.66Barchart | Table
Spo031970.66Barchart | Table
Spo049850.66Barchart | Table
Spo051920.66Barchart | Table
Spo074260.66Barchart | Table
Spo085400.66Barchart | Table
Spo105500.66Barchart | Table
Spo130310.66Barchart | Table
Spo154200.66Barchart | Table
Spo159970.66Barchart | Table
Spo166870.66Barchart | Table
Spo173860.66Barchart | Table
Spo184510.66Barchart | Table
Spo190890.66Barchart | Table
Spo195180.66Barchart | Table
Spo208580.66Barchart | Table
Spo001750.66Barchart | Table
Spo255040.66Barchart | Table
Spo266460.66Barchart | Table
Spo268060.66Barchart | Table
Spo268330.66Barchart | Table
Spo026720.65Barchart | Table
Spo022630.65Barchart | Table
Spo013130.65Barchart | Table
Spo018140.65Barchart | Table
Spo224450.65Barchart | Table
Spo160490.65Barchart | Table
Spo149190.65Barchart | Table
Spo010480.65Barchart | Table
Spo027470.65Barchart | Table