Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAACAATAGCAACAAAAAACAACAACAATGACGACAACATTCAAATAGCAGCAAACAGGTTATGTTTGGATTCGAAAAAAACAATACATTTACTCTAATAGTCTATCAATTCTATCGACGACAACAACAACATCCAGAAAATTGAAAATAATAGCAACAAAAAAACAACAACAATGACGGCAACAACATTCAACACTGAAATCAATAAATGCAATTCCAATCTAGTCAAGGAGAGAAGGAGAGAGTGGAACCTCACGACGGGTAAACTCGACAGCGGCGAATAAGGACGTCGGAAAGGGGAAGACGGAAATCGGCCTCCGTCGGCGACCAGAGAGCGGAAACCGGACGCCGCCGGCCACTAGATAGCAGGGGGAAGAACGTCGGAGAGGAGAGAGAAAGAGAAATAAGTTTGATTTTTTTTTTTTGGAATTTATGTCGAAAACATGTATTAAGGGCAAAATAGTAAAACGCGACTAACGGCAGACTAACGGCGTTAACTCAAAGGTGCATCTCATGAACAGTATAAAAAAATAGGGGTATATTATGTGATTCAAAAGGCGCGAGGGTATTTGGTGCATTTTTGCAAACCTCGGGGGCATTTCATGAAAAAACCGAAAAAAAAATTATATGTTTCTCTTATTTGAAATTCATATTCAACTTGGGCCTGAAAAAATTTGGGGTGACTAGGAAGTGATTAGGACAATAGCTGGCATTCATACCCAATTAGCTAAGAGGGTATCATGACAATACTTAGACTGAGACTCAGTTTAAGTGTGGGTTTTACGAATTTTCGATGGGTAAAATAGTGGGACGATTTTAAGTAATATAGGACGGTAAATAATAAGCCCATGTCAAAATCAAATACAGAGTACAATTGTGGTTGGAACTAAAAAGGGCCCACATTGTGAGAATCAGAAGAATCTCCAAATAGGAAAGAAATACAAACCAAAAACTGTCCACAAAATTCCCCGTTAATGACACAAATCAAATCAAACAGTGACAAGTGACAACGGCTTCATCGATACCGTTAATTATGTTAGTTTCTCCATCTCTCTCTTACTTTGCGTTTTTAACAACAACAAAGAAAATTCAAAATCCCTAAATCCCCAAATTCAATCACATTTCCCCCAGTTTTATTCCCAATTACTTTAATCAAAATCAAATTTCATCTTCAAGACTTCAACCTACGAATTTTGGATGAAATTATGAGCCATTTGACTATTTGAGATCAATTTGCAGAACAAATAATGTCTACTCTTCTTTTGTATGTTGCTGTAGAGCTCGGGTTCGGTATTTTAGCCCAGAATCATCTAGGGTTCCGTTTTCAAAACCTAATTTGAGCTCGTTTCCTTCTCTCTCCTCCGATTCGCCGAAGTTGTTTCAGGGCGAGCCGTGGTTGCGGTTGAATTATCGGAGATATGTTGCTCGCGCTTCTAATTGGACTGGCGAGAAATCCCCCTATGACGTATGTTTTTATTTTATTTTGTTTCGTGAACATTTAATGATGTTTGTGGGATTCAATCTGTGTTAAATTAACTAAGCTAGTAGGCATCAGCGCTTTCTTTTTGTAATTGCATATCCTTGTTTTATAAGTTGTTGTTAACTTGCTATGTTATGTTTTCAACATGTTTATGGAAATTGATTGTCTGCTGATTCTGTAATTGAATGTTCTTATTTGTTGTTTACAATTTACAGAACTAGAGAGAGACGCGGATGAAGAGCAAGTAAAAGTCGCTTACAGGCGCTTGGCCAAGTTTTATCATCCTGATGGTTTGTCTCCTTAGTCTTTACCTTAAATTTGTTTACCTATCGATTTGATTATAGTTTTTCGTTGACGTGTTCATTTGGTTGGGTTATAATATACAGAATTCTCAGGTAGTCAGGTATAATCTACTCCGTAGTTTTTATAGGCTATGGACTTAATTATACTACTAATTGAGGCATTGTTGTATAAATATCACAACTTATCAATTCATACTCAACCGTTGGTGTTAACTACAAAGTACAAACTAGTTTTTATACTCAACCGTTTGTAGTTAACTAGTGTTAACTACAAAGTACAAACTAAGTACAAAGTATAATCTAGTTTTTATAGGCTATGGACTTAATTATACTACTAATTGAGGCATTGTTGTATAAATATCACAACTTATCAATTCATACTCAACCGTTGGTGTTAACTACAAAGTACAAACTGCATGCTAGAAACAATCGTGTTATCATTTGAAAATCACAAGTTCATAACCCCTCACCAATTAATCACCACTTATGCAAATAGGAGTATTAGGATTCCCTTGAAATCAAAACATATCAAATCTCTGTATAAGAATGTCGTTGCGCAATTTTGCTTATAAAATGTGCTTTGATCCATTATACCTTTTGTAGTCTATGATGGTAGAGGCAATCTCGAGGAAGGTGAAACAGCTGAAACCCGATTTATTAAAATCCAAGCAGCTTATGAGCTGCTTGTTGATGGAGAGAGAAGGAGAAAATACGATATGGAAAACCGGGTGAACCCAATGAAGGTGAAATTATGACTCTAATTTCTTGAATGGGAGTTATTACAAAAATAAGTACGGAGTAGTTCAGTTCGTTGTCATATTTATCTTTTCGGTCTATCAATACACTTAATTGGTTTTCTATTTAAAATGGAAATACTAATTAATTTATCTTGTTGTTTTATAGGCATCTCAAGCATGGATGGAGTGGCTCATAAAGAAGCGAAAAGCATTCGACCAACGAGGTGGAATGGCAATTGCAGCATGGGCTGAGCAGCAGCAGCGTGAAATAAACTTGAGAGCACGACAACGTACTCGATCAAAGGTATCTAGTTTGTTTTTCCTACTTTTCAAATTCAGTCAAAGTGCATCCCTACTTATTCTCCTGGCTGGATGATGTTGATAGAACCAGAATTTTAGATAACTACAATTACTATAGGATCGATTGACTTTATGGTATGTGTATTTGTGTTCCACCTAAGACAATTTTCTGTACAAAGTTAATGTTTACAAAAATGCATTAGACGGCAGAGATCCGATGCTCTTTGAGCATGTCAAACACTCTGACTTACTATATGCATGCCTCCATCCTCTAAACAATGAGTGCGTCGAGGCGGATATCGGGCATGCAACAACAAACACATATCAACTAAAAGACAAATAGCTAAAAGACAAAAAAGGAAGTACCATTCATGTAAAAAAAGTACCATTCTAATACCATTCTGTAAAAAAAAGTACCATTTGTGTTTAGAAAAGTACCATTTAATTTTTTTTTTGTCCTTTTTCCTATTTTGTCTTATGTTCTGATATGTATTTGGACACACATATCAGATATGTGTTTTTACTTCCTCTCTAAACAATAGGCCTCAGCATGAAAGTGTCTTAGAACGTACCTTAGTACGTATCCCACAACCATCTTTTATTTTTTGGATTTTTACTCTCTGCTATAGTGCTATAGTAATGTATATGTACTTTGATTGAAAATCTTGTTTAAGGATATCATTTGAAGCTATATCAAATAAATAAGTTTAGAAAGTGACCTAAAATTCTTAAGTCTAGAATTCTGGATATTTGGAAACAGTGGGAATATAAAAGATATTGAAAAAAAAGAAGATGAGTTTCCACTTTCCACTGGTGTGATGTTGGTGAATGGGAAGATGTGATGGTAAATTAGTAAGGATGTCTCCTTGAAACATATAAGGCTTGTTTGTATATTACAAAGACGTATTTTAGATGGTGAATTTACAGTTAATATAACGAGTTTCAGGTTGATCCTGAAGAAGAGAAAAGGATTGTAGCAAAGGAAAAGAAGGCATCTGTAGAGAACTTCCAGACCACACTTAGGAGGCATACACTTGTGTTAAAGAAGAGGGACTTAATGCGTCGAAAGAAAGCTGAAGAGGAAAAGGATAAAGAGATTCGGCGTCTGTTAGCCTTAGAGGGATTTGAATTGGAAAGTGAAGATGAGTAGCTGCATGTTTGGATTCAGTTCATTCAACTTTTAATGGTATACATTCTCATTTATTGATAGTTTTGTACAAAAATGTTTAACTGTATATACATGCTGGAGACGGCAAACAGAGTATTTATGAAAGCAAAAGAAATGAAAAGGAGGGAATTAATGACATCGATCTGAATTTATTACTGGTTTTCCCTCTTC ATGGCAACAATAGCAACAAAAAACAACAACAATGACGACAACATTCAAATAGCAGCAAACAGAGCTCGGGTTCGGTATTTTAGCCCAGAATCATCTAGGGTTCCGTTTTCAAAACCTAATTTGAGCTCGTTTCCTTCTCTCTCCTCCGATTCGCCGAAGTTGTTTCAGGGCGAGCCGTGGTTGCGGTTGAATTATCGGAGATATGTTGCTCGCGCTTCTAATTGGACTGGCGAGAAATCCCCCTATGACGTATAACTAGAGAGAGACGCGGATGAAGAGCAAGTAAAAGTCGCTTACAGGCGCTTGGCCAAGTTTTATCATCCTGATGTCTATGATGGTAGAGGCAATCTCGAGGAAGGTGAAACAGCTGAAACCCGATTTATTAAAATCCAAGCAGCTTATGAGCTGCTTGTTGATGGAGAGAGAAGGAGAAAATACGATATGGAAAACCGGGTGAACCCAATGAAGGCATCTCAAGCATGGATGGAGTGGCTCATAAAGAAGCGAAAAGCATTCGACCAACGAGGTGGAATGGCAATTGCAGCATGGGCTGAGCAGCAGCAGCGTGAAATAAACTTGAGAGCACGACAACGTACTCGATCAAAGGTTGATCCTGAAGAAGAGAAAAGGATTGTAGCAAAGGAAAAGAAGGCATCTGTAGAGAACTTCCAGACCACACTTAGGAGGCATACACTTGTGTTAAAGAAGAGGGACTTAATGCGTCGAAAGAAAGCTGAAGAGGAAAAGGATAAAGAGATTCGGCGTCTGTTAGCCTTAGAGGGATTTGAATTGGAAAGTGAAGATGAGTAGCTGCATGTTTGGATTCAGTTCATTCAACTTTTAATGGTATACATTCTCATTTATTGATAGTTTTGTACAAAAATGTTTAACTGTATATACATGCTGGAGACGGCAAACAGAGTATTTATGAAAGCAAAAGAAATGAAAAGGAGGGAATTAATGACATCGATCTGAATTTATTACTGGTTTTCCCTCTTC ATGGAAAACCGGGTGAACCCAATGAAGGCATCTCAAGCATGGATGGAGTGGCTCATAAAGAAGCGAAAAGCATTCGACCAACGAGGTGGAATGGCAATTGCAGCATGGGCTGAGCAGCAGCAGCGTGAAATAAACTTGAGAGCACGACAACGTACTCGATCAAAGGTTGATCCTGAAGAAGAGAAAAGGATTGTAGCAAAGGAAAAGAAGGCATCTGTAGAGAACTTCCAGACCACACTTAGGAGGCATACACTTGTGTTAAAGAAGAGGGACTTAATGCGTCGAAAGAAAGCTGAAGAGGAAAAGGATAAAGAGATTCGGCGTCTGTTAGCCTTAGAGGGATTTGAATTGGAAAGTGAAGATGAGTAG MENRVNPMKASQAWMEWLIKKRKAFDQRGGMAIAAWAEQQQREINLRARQRTRSKVDPEEEKRIVAKEKKASVENFQTTLRRHTLVLKKRDLMRRKKAEEEKDKEIRRLLALEGFELESEDE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo20317.1 vs. NCBI nr
Match: gi|902177081|gb|KNA08894.1| (hypothetical protein SOVF_158520 [Spinacia oleracea]) HSP 1 Score: 222.6 bits (566), Expect = 3.700e-55 Identity = 120/122 (98.36%), Postives = 122/122 (100.00%), Query Frame = 1
BLAST of Spo20317.1 vs. NCBI nr
Match: gi|902212033|gb|KNA16856.1| (hypothetical protein SOVF_083830 isoform A [Spinacia oleracea]) HSP 1 Score: 213.8 bits (543), Expect = 1.700e-52 Identity = 118/122 (96.72%), Postives = 119/122 (97.54%), Query Frame = 1
BLAST of Spo20317.1 vs. NCBI nr
Match: gi|731361895|ref|XP_010692603.1| (PREDICTED: uncharacterized J domain-containing protein C4H3.01 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 205.3 bits (521), Expect = 6.100e-50 Identity = 111/122 (90.98%), Postives = 116/122 (95.08%), Query Frame = 1
BLAST of Spo20317.1 vs. NCBI nr
Match: gi|902212034|gb|KNA16857.1| (hypothetical protein SOVF_083830 isoform B [Spinacia oleracea]) HSP 1 Score: 184.9 bits (468), Expect = 8.500e-44 Identity = 104/108 (96.30%), Postives = 105/108 (97.22%), Query Frame = 1
BLAST of Spo20317.1 vs. NCBI nr
Match: gi|703135364|ref|XP_010105853.1| (Chaperone protein DnaJ [Morus notabilis]) HSP 1 Score: 179.5 bits (454), Expect = 3.600e-42 Identity = 99/122 (81.15%), Postives = 111/122 (90.98%), Query Frame = 1
BLAST of Spo20317.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNQ4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_158520 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 2.600e-55 Identity = 120/122 (98.36%), Postives = 122/122 (100.00%), Query Frame = 1
BLAST of Spo20317.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBH2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_083830 PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 1.200e-52 Identity = 118/122 (96.72%), Postives = 119/122 (97.54%), Query Frame = 1
BLAST of Spo20317.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BIA1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g021410 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 4.200e-50 Identity = 111/122 (90.98%), Postives = 116/122 (95.08%), Query Frame = 1
BLAST of Spo20317.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RDD9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_083830 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 5.900e-44 Identity = 104/108 (96.30%), Postives = 105/108 (97.22%), Query Frame = 1
BLAST of Spo20317.1 vs. UniProtKB/TrEMBL
Match: W9SH24_9ROSA (Chaperone protein DnaJ OS=Morus notabilis GN=L484_021508 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 2.500e-42 Identity = 99/122 (81.15%), Postives = 111/122 (90.98%), Query Frame = 1
BLAST of Spo20317.1 vs. TAIR (Arabidopsis)
Match: AT1G77930.1 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 167.9 bits (424), Expect = 3.800e-42 Identity = 93/122 (76.23%), Postives = 108/122 (88.52%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo20317.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo20317.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo20317.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo20317.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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