Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GACCAATCAGCATGGCAAAGAATCCTACCTTATTTTACTCCGTACTACCGTGTCATACTCTATGACTTGGCCTGTGCTGGGAGTGTCAACCCTGACTTCTTCGACTTCCATCGATACACCACCCTCGACGCCTACGTCGACGACCTCCTCGACATCCTCGACGCGCTCGCTGTCACGCGTTGCGCGTATGTTGGCCATTCTGTTTCAGCTATGATCGGCCTTCTTGCTTCTATACGTCGTCGTGATCTTTTCTCTAAGCAAATACTTGTTGGTGCTTCTCCTAGGTAATTACTCTACTCTTTTTTTTTTGTTTTTTTTGTTTTTTTTAATGAAGCTGCAAAGACAATATAAATTATAAGTGGATATTATCTTACATTTGTTATCGATCAGTTTTAATCACTAATCGTTACAAATTATAATGATGTCGTAAAGACAATACAAATTTATACCATTATCTTACATTTGTTATCGATCAGTTTTAAGCCAATATTTCATTGATTTTCTAATTTTCTATTAGGTGCTCTAAAAATCTTCCGAATCTTTTAATGTACAATTTGCGTATCAACTGCGTGCCATTATTTATTTTTGTAATTTTTAGGGAAAATGTTGCGTGTCACTTCGTTATGCTTCGTATTAGACTGTTGCTATTCTTGTTCCACCACTTTTTATTTTAAAACTAGTTTTTGGACTCGGAAGATGCACCGGGTTACTAAATTAATAACATTTATATTTACTATTTATTTTTTTGCAATGATAACATGAAACATCTAATAGCTTAGTGGTAAAGACTTAAACGCCTTTTAATATAGTATAGATTTAAAATCAACTTGTTTTTAACCCGGTTTTCTTGCTTAAAAATTTAGTTATATTGTTTATGTGGTACGGAGTACAATAGATAGTACGTAGTAGATGATAAGGAAATTTTGAAACAATAATAGAGGAAGTATTTGGAATGCGATAAAATTGAAATTGGAATTTTAAAATAAATAATTAAAATTAATTGCATGGGAAAATAAATCTAGGAGAAGAAAAAAAAAGATAGGTAAAGAGGAATTAATTTATAATTTTATCACAATTTTAATTATACACTCGCTTGCAAAGTATTTTCCTTACATCTGGATAAATATTAGTTGAACACGTAATAAACTCAGAGAAGGATTTCAATATACACATACACGCAAGCATACTACTCCCTCCTTTTCTTTTTGATGTATCCATTTAAGAAAGTAGAGAGTTTTTAAGAAAATTGGAATCTTGGTTTGTATTGGTATAAGTGTAATGATTGGATGTAAGAAAAATGATTGTATGTAAGAGATTATAATAAAAAAAGAAGAGAGAAAATAATAAAGAAATAAGGTAAGAGAGAGGAGTGATAATGATGGGTGATAAAGGAGGTGGGAGAGTGGGTATATGGGGAAGGGAAAATAATTAAATAATAGGGGTGGGGAAATTTAGGTGGGAATATGGGTAGAATCTTTAGGTATTTTGGTAATTAGATAGAAATGTAAGGGTATTTTAAGATAAAATTTATGTCCAACAATAGAAACGGATACAACAAAAAGAAACGCTTAAAATGAAAACAGATACAACAAAAAGAAATGGAGGGAGTATTTCCCAGTCATCATATGATGTTCTTTACTTGTAATTGGTCAAAAGCGTACAGTAGTGTTGAAGGACTGTCTATTTATACTAGTGTCGTGATAGACTGAAGTTGCGTATCACCAACTCTGTTGACTTGTAGTAAATAGACTTGATTTGCATATCACTAACCCTTTTCCTTTTTTGTTCATGTGGGGGTCTCATACATTAGGAAACAAGCCAACTACTGATACTATTAGCCAATCAAACAAGTCAACAACCAATCTTTAAATTTCAAAATTAAGATACTTTTAATGGTTCATCTGTGACAAAGTTTAACAAAATTAAGATACTTTTAATGGTTAACTAGTGTGGCCCGGGCGATGCTCCGGTCCGGTTGCTACATTGAATAACTAAAGTTTTAGATTTTTCTTGAGCTCAATACTTGACCAAAATACTTATATTCTATAGAATGAAAAATATCCGTGAAGTTCGTCAAACACAAACATGCTAAGTCATTTATCATGGCAAGTAAGTTTTCAATCATATCATCTTACAATTTGTATAATTTGTTTTTTCGTGGAACTAAGTGCGTCAAATTAATAAACACCAAATTAGATATATATGCAGCTATGTAAGGCAATCCTATAGTTGATTATTATGAGACTTAAAAAATTAAGGCAATCCTATAGTTGATTCTTATGAGACTTAAGACATTATGTTTCTTCATGGTTGTCATAATGCTTTAATTTTTTTTCTTTTCAAAATAGTCCATAGACATTAAAAAGTCACATACAAATTTATTTGTTTTAGACTTCATATGAAAATTTATTTATAAATTAATGTGAAGAGATAAACCACAATTGGTGATTGGTTAAGATGGTAATGAGAACTATCATCCACACTTGACGTCTGGTGTTGTAATCTACTAAACTTTTGTTTGGTTTAACTTATTTTTCTAAAATTAATTTATGAACTTATCTGAATTTCAAAGTGACCTAGACAACCGCGCAATAAAACTTAGCCCAATGGGGCAATTGCAATACCAACAACTATTGTCATGCATTTATGAAGTAAGACCTCGAAATCAATTATTGAAGAATCATTGTAACTTTGTGAACTTAATTTCAACCCAATCTTTAACTGTAAGATTTTCTTACATGTGAAATTTATTGCTATAAATAATTGGACAAAGTGTACTAATTCAAGATAACAATTACGGAGTAATAGAAAATGCTTTACTCATAATAATAATGTTAGACCAATGAGGTTTTGGCGTACTGGTTAATACTGATGGTCTATGATAGATTTGAGGTTCGAATCCTAACATAAACTTTGTTTTGTAGGTTTTTGAACGACGAGGACTATCACGGTGGATTCGAGGAAGGTGAAATAGAGACAGTATTCTCAGCAATGGAGGCAAATTACGCGGCATGGGTGAACGGATTTGCACCATTAGCCGTAGGAGCGGATGTACCAACAGCGGTGCGTGAGTTTAGTAGGACATTATTCAACATGAGGCCAGATATATCCCTATTTGTTTGTAGGACAGTTTTCAATAGTGATTTTAGGGGTGTCCTTGGATTAGTTAGGGTACCTTGTTACATTATCCAAACGGCTAAAGATATGTCTGTTCCAGCATCTGTTGCTACTTACATGAAAAACCATCTTGGGGGTAAGAGTACCGTTATTATGCTTAATACCGAAGGCCATTTACCCCACCTTAGCGCACCCGCCCTCTTGGCCCAGTCCCTTAGACGCGCGCTCTCTCAGTAACCTAAGCTACGTTTTGAGACTCGATCTGGCTAGCTAGAGACTCGGGTTTGATTTCGGCGGCCTCATTTATGTCATTTTACGTGCGAGCTGTGAGATATTTTCGTGTTAATTAGCTTGTACTGTTCTATGTACCTCGGCCATAATTGATGCCAATTTTTCCTAGACAATATAATACTCCGTACAAGGTTAAGCTTTGTCATGTGTTATAGACTTATAACAGTGACGAACAATATTGTAAGTTTGAAATTGTACGTGAGGACAAATACGAATGGAGTTCTAATGTTACGGAGCAGTTGTACGGATTTATTTTTGGATTTATCGATGTAGTATATAACAAAATTGTTAGTAAGTGTTCGTATAAATTTGGAGTTTTTTCATCCGTACTACTACTCGGTTGATTTCCACTTCTTGCTTAAAAGTTTAAACGCTACTAATTATTTATCAAACACTGTAAGGATTATGTTGTTTGATAAATAATTCGTAGCCATTTATCTAAGTGATGTAAGTAAAAAAAGAATGAGAGAATCAATCACAAGGTGTACAATAAATTTATCGTACACCAAAGTAATTTTTACCTAGTTTTTTTGTAACTTTTACTATATTTTGGTTAACTTTATATTATAAAAAAAATTGATAGATATATTAACCTTTTAAAAGGTTAAAC GACCAATCAGCATGGCAAAGAATCCTACCTTATTTTACTCCGTACTACCGTGTCATACTCTATGACTTGGCCTGTGCTGGGAGTGTCAACCCTGACTTCTTCGACTTCCATCGATACACCACCCTCGACGCCTACGTCGACGACCTCCTCGACATCCTCGACGCGCTCGCTGTCACGCGTTGCGCGTATGTTGGCCATTCTGTTTCAGCTATGATCGGCCTTCTTGCTTCTATACGTCGTCGTGATCTTTTCTCTAAGCAAATACTTGTTGGTGCTTCTCCTAGGTTTTTGAACGACGAGGACTATCACGGTGGATTCGAGGAAGGTGAAATAGAGACAGTATTCTCAGCAATGGAGGCAAATTACGCGGCATGGGTGAACGGATTTGCACCATTAGCCGTAGGAGCGGATGTACCAACAGCGGTGCGTGAGTTTAGTAGGACATTATTCAACATGAGGCCAGATATATCCCTATTTGTTTGTAGGACAGTTTTCAATAGTGATTTTAGGGGTGTCCTTGGATTAGTTAGGGTACCTTGTTACATTATCCAAACGGCTAAAGATATGTCTGTTCCAGCATCTGTTGCTACTTACATGAAAAACCATCTTGGGGGTAAGAGTACCGTTATTATGCTTAATACCGAAGGCCATTTACCCCACCTTAGCGCACCCGCCCTCTTGGCCCAGTCCCTTAGACGCGCGCTCTCTCAGTAACCTAAGCTACGTTTTGAGACTCGATCTGGCTAGCTAGAGACTCGGGTTTGATTTCGGCGGCCTCATTTATGTCATTTTACGTGCGAGCTGTGAGATATTTTCGTGTTAATTAGCTTGTACTGTTCTATGTACCTCGGCCATAATTGATGCCAATTTTTCCTAGACAATATAATACTCCGTACAAGGTTAAGCTTTGTCATGTGTTATAGACTTATAACAGTGACGAACAATATTGTAAGTTTGAAATTGTACGTGAGGACAAATACGAATGGAGTTCTAATGTTACGGAGCAGTTGTACGGATTTATTTTTGGATTTATCGATGTAGTATATAACAAAATTGTTAGTAAGTGTTCGTATAAATTTGGAGTTTTTTCATCCGTACTACTACTCGGTTGATTTCCACTTCTTGCTTAAAAGTTTAAACGCTACTAATTATTTATCAAACACTGTAAGGATTATGTTGTTTGATAAATAATTCGTAGCCATTTATCTAAGTGATGTAAGTAAAAAAAGAATGAGAGAATCAATCACAAGGTGTACAATAAATTTATCGTACACCAAAGTAATTTTTACCTAGTTTTTTTGTAACTTTTACTATATTTTGGTTAACTTTATATTATAAAAAAAATTGATAGATATATTAACCTTTTAAAAGGTTAAAC ATGATCGGCCTTCTTGCTTCTATACGTCGTCGTGATCTTTTCTCTAAGCAAATACTTGTTGGTGCTTCTCCTAGGTTTTTGAACGACGAGGACTATCACGGTGGATTCGAGGAAGGTGAAATAGAGACAGTATTCTCAGCAATGGAGGCAAATTACGCGGCATGGGTGAACGGATTTGCACCATTAGCCGTAGGAGCGGATGTACCAACAGCGGTGCGTGAGTTTAGTAGGACATTATTCAACATGAGGCCAGATATATCCCTATTTGTTTGTAGGACAGTTTTCAATAGTGATTTTAGGGGTGTCCTTGGATTAGTTAGGGTACCTTGTTACATTATCCAAACGGCTAAAGATATGTCTGTTCCAGCATCTGTTGCTACTTACATGAAAAACCATCTTGGGGGTAAGAGTACCGTTATTATGCTTAATACCGAAGGCCATTTACCCCACCTTAGCGCACCCGCCCTCTTGGCCCAGTCCCTTAGACGCGCGCTCTCTCAGTAA MIGLLASIRRRDLFSKQILVGASPRFLNDEDYHGGFEEGEIETVFSAMEANYAAWVNGFAPLAVGADVPTAVREFSRTLFNMRPDISLFVCRTVFNSDFRGVLGLVRVPCYIIQTAKDMSVPASVATYMKNHLGGKSTVIMLNTEGHLPHLSAPALLAQSLRRALSQ Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo20571.1 vs. NCBI nr
Match: gi|902214245|gb|KNA17451.1| (hypothetical protein SOVF_079820 [Spinacia oleracea]) HSP 1 Score: 332.0 bits (850), Expect = 5.900e-88 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1
BLAST of Spo20571.1 vs. NCBI nr
Match: gi|731314724|ref|XP_010688104.1| (PREDICTED: probable strigolactone esterase DAD2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 318.5 bits (815), Expect = 6.700e-84 Identity = 159/167 (95.21%), Postives = 163/167 (97.60%), Query Frame = 1
BLAST of Spo20571.1 vs. NCBI nr
Match: gi|414145488|pdb|4DNP|A (Chain A, Crystal Structure Of Dad2) HSP 1 Score: 286.2 bits (731), Expect = 3.700e-74 Identity = 142/166 (85.54%), Postives = 152/166 (91.57%), Query Frame = 1
BLAST of Spo20571.1 vs. NCBI nr
Match: gi|590597067|ref|XP_007018509.1| (Alpha/beta-Hydrolases superfamily protein [Theobroma cacao]) HSP 1 Score: 286.2 bits (731), Expect = 3.700e-74 Identity = 139/167 (83.23%), Postives = 155/167 (92.81%), Query Frame = 1
BLAST of Spo20571.1 vs. NCBI nr
Match: gi|414145489|pdb|4DNQ|A (Chain A, Crystal Structure Of Dad2 S96a Mutant) HSP 1 Score: 286.2 bits (731), Expect = 3.700e-74 Identity = 142/166 (85.54%), Postives = 152/166 (91.57%), Query Frame = 1
BLAST of Spo20571.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RD40_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_079820 PE=4 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 4.100e-88 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1
BLAST of Spo20571.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D481_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g015160 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 4.700e-84 Identity = 159/167 (95.21%), Postives = 163/167 (97.60%), Query Frame = 1
BLAST of Spo20571.1 vs. UniProtKB/TrEMBL
Match: L7MTK6_PETHY (DAD2 OS=Petunia hybrida GN=dad2 PE=1 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 2.600e-74 Identity = 142/166 (85.54%), Postives = 152/166 (91.57%), Query Frame = 1
BLAST of Spo20571.1 vs. UniProtKB/TrEMBL
Match: A0A061FMM2_THECC (Alpha/beta-Hydrolases superfamily protein OS=Theobroma cacao GN=TCM_034711 PE=4 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 2.600e-74 Identity = 139/167 (83.23%), Postives = 155/167 (92.81%), Query Frame = 1
BLAST of Spo20571.1 vs. UniProtKB/TrEMBL
Match: L7MTK5_PETHY (DAD2 OS=Petunia hybrida GN=dad2 PE=1 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 2.600e-74 Identity = 142/166 (85.54%), Postives = 152/166 (91.57%), Query Frame = 1
BLAST of Spo20571.1 vs. ExPASy Swiss-Prot
Match: DAD2_PETHY (Probable strigolactone esterase DAD2 OS=Petunia hybrida GN=DAD2 PE=1 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 2.300e-76 Identity = 142/166 (85.54%), Postives = 152/166 (91.57%), Query Frame = 1
BLAST of Spo20571.1 vs. ExPASy Swiss-Prot
Match: D14_ARATH (Strigolactone esterase D14 OS=Arabidopsis thaliana GN=D14 PE=1 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 3.800e-71 Identity = 136/165 (82.42%), Postives = 147/165 (89.09%), Query Frame = 1
BLAST of Spo20571.1 vs. ExPASy Swiss-Prot
Match: D14_ORYSJ (Strigolactone esterase D14 OS=Oryza sativa subsp. japonica GN=D14 PE=1 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 2.000e-67 Identity = 123/167 (73.65%), Postives = 144/167 (86.23%), Query Frame = 1
BLAST of Spo20571.1 vs. ExPASy Swiss-Prot
Match: D14L_ORYSJ (Probable esterase D14L OS=Oryza sativa subsp. japonica GN=D14L PE=2 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 5.000e-47 Identity = 91/164 (55.49%), Postives = 125/164 (76.22%), Query Frame = 1
BLAST of Spo20571.1 vs. ExPASy Swiss-Prot
Match: KAI2_ARATH (Probable esterase KAI2 OS=Arabidopsis thaliana GN=KAI2 PE=1 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 6.800e-44 Identity = 85/155 (54.84%), Postives = 119/155 (76.77%), Query Frame = 1
BLAST of Spo20571.1 vs. TAIR (Arabidopsis)
Match: AT3G03990.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 268.9 bits (686), Expect = 2.200e-72 Identity = 136/165 (82.42%), Postives = 147/165 (89.09%), Query Frame = 1
BLAST of Spo20571.1 vs. TAIR (Arabidopsis)
Match: AT4G37470.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 178.3 bits (451), Expect = 3.800e-45 Identity = 85/155 (54.84%), Postives = 119/155 (76.77%), Query Frame = 1
BLAST of Spo20571.1 vs. TAIR (Arabidopsis)
Match: AT3G24420.1 (alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 137.1 bits (344), Expect = 9.800e-33 Identity = 69/166 (41.57%), Postives = 107/166 (64.46%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo20571.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo20571.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo20571.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo20571.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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