Spo20613 (gene)

Overview
NameSpo20613
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRNA-binding family protein
Locationchr2 : 44329548 .. 44333738 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTATCACCCAACGAAAAGAGTGGTCGATCGAGAAACTTCGGCAACCTGTTTACTTATCTACTCAGGCTCCTCAAACGACCCCAGTCTTCTCTTATTTCCCCGCACATCAAACTTTGAAAAAAAAACCCTAGTTTCTGCAATTCCTCCCTTGCAAATCGCTTTGATTTCACAATGGTTCCCAAGAAAGCAGGCATCAATGAAGTCGACGGCGCTAGCCCAGGGTACCCTCTCTTTCTCTCCTCAATTCGTTATTTTTTTTACAGGAAATCTGGTTTAATTAAAAATTTCTTTGCCTTTTATCAGCAAAATTTTCGTCGGAGGATTAGCAAAAAACACAAATCTTGGTAAGTCTCTCGTATTTTTTTGTTAATATAGTTTCTGTGATTCTTGATGGCGTAATCCCCTTTTTTTGATATGGAGTTTTGATTTTTTTAGTAATTTTCTTGAGTTGTGGGTTTGAGCAGATACGTTTACCAAGTACTTTGAGAAGTATGGGGAAGTGATTGATAGTGTGATAATGAAAGATCGGAACACTGGACAACCAAGGGGTTTTGGGTTTATCACTTATTCTGATCCTTCTGTTGTTGATACCGTCATTAAGGAGGACCATGTGATTAATGACAAGCAGGTAATCTTCTATTTCATTTATCAAATTTTCTTGGTTTTAGTGATTTGATGATGGTGGGGTGTCCCATGGAAGATTTTTCGGGTTCTCGGAATCTTAAGGTCATCTTAGTTTTAGTAATTTTAGGTGTTCGTCTATTATACTCGTAATTCACTTGTGCAGACCTTATCAGAAATTATTTTGGTTTCAAATTGAACTTTAGGGATCCGTTTGGCAGGGCGTAAAACGTTTTCATTGTAAAATGATTTTCCATAGAAAATATTTTACAAGGAAAACACAATTCCAAACTAGTTTTCTTTTGTTTGGTACCTCTTAGGAAAATGGGAGAAGATGGTGAAGATTGAGGAAAGAAAGGAGAGGGGGTAAGGAGGAAAGAAGCAAAAGTGGTTTCCCTCCCTTCCAAATGAAAAAGGATTTTTCACTTTGTAGGGAGTCATGGAATTTTCTTTTCATTCCTTACGCCCTACCAAACAGAGCCTAGAAGTCCTTACATGATTGGAACTTATCTGAACACCCTATGTTTTAAAACCTAATTTTTTTCTTGGTGAAAATTGAAAAGAACAAAGGTACAGAAAAGTATTTAATTTTGATTTTTTGCAGTTTTGGAAATGCTTTTGCTCATTAGAGACATTGGATCTCCCTGTCTATTTTAGTAATTTACATGATTGTGAAGGGGGGATCTACTAAAGGGTTTTTAGGTTATTGGAATTTTGAAATGGAAACTAGTTTTGTTGTCTTTCACCTGGAATTCAATTATGAACTTATCTTATCCTACCTTATTTTAGTTGTGAATAGAACTTTGGTAGCATTTATGTGATTTGAACTTAATTTTCCCAAAGTTATTGCTTTAAGGTGGAAAGAACTAACACTTGGGATTTAACATTGCTCCTTCTGAAATGTTGGCGACGCTTTTGATTTGAACTTCTGCTTACTTTGACCTTTCATACATTGCATTAAGCCGTAGAGATCCCTTGTAAATGGAAGAGTAAGTGATATGTGCTATTCTAGTTCACCAATACACATGAGATGTTCTTTTGGTGGGGCTGATTGGTTTCTGATATCCTTTTTTATGGAGCTTCTTTTTGTTTTTGTGACAAATATTCACTATTAACCGAACTGAAGGTAGATGGCATATGCATGGGAGTTATGTGCTGCTTGGGATGCCTATCTTCCATGAATTAATACTTCTTAACAAGTAACGATTGGTGAATGGGAAACCAAATAAGGCTTTAGATCTAATACCACGACAGTGGTGTTTACTGTCCTCTCTTAAGATCCTGCTTGGAGTATGTATCAATAATATGTCAAGGACCTACTTCATCGAGTGTGTGTGTTTGCTAGATTAATTTTATTGTATTTGTTTGATCGCGTGGTGTTGTGGGGTGAGTGGAGTTCTATATCTCGTGTGAGCATGACAATAACAAACTATATTGTAATAAAGAGTTTTTGGCATGTTAAATTCTATTGCCTTTATAGTAAGCAAATTCTAGTGATGCTGATCCTGTTAAACAATTTTGACCGTCTTCAATTGAATATCATTTTTTGTGAATTATTTTCTCTCTCTCTCTCTCTAATTATTCCAAGTATACTTATACATGCTAATTGAGAGTGGAGGAATGGAGAGTTGAAGTGGGAATGAAAGTACGAATGGGTTAGTGTAACTTGTAATTTTTCCCACCTAGATTGCTTGTGTATTTTCTCGTCAATATTAACTGGATTCCTCTGTGCCAGTTTTCCACATCTTTATTTCGAATGTCCAACATATGTTTCCATGTTAAATAATTGTTCTAGGTGGAAATCAAAAGGACAATACCTAAAGGTGCTGCACAAGCAAATGGTTTTAAGACTAAGAAGATCTTTGTTGGGGGCATTCCGACAACCGTGACAGAAGGTCTGCTACTAAACTAGTATTTATTGTTTTATTTTCCTCTTGGACATGGTTGTTACTCGCTAGCATTCTTGATACTGATTTGCTCAATTGTTGATTCTTTATGTCCGAATAGATGGTTTGAAGGACTTCTTCTCAAAGTACGGTAAAGTTGTGGAACATGAGATCATTCTTGACCATGCTACAAAGCGATCTCGAGGATTTGGTTTCGTTGTGTTTGACAATGAAAAAGTTGTAGATGATATTCTGGCTGATGGAAACATGATCGAATTGGATGGTTCAAGGGTGAGTTTAGCTATCTGGCTCTTTCTTAGGACTGTGTATCCTATGTCACCTCTGTTTAGATCAATTAAACAATGGTGTAATATACCTTATTCTTATAAAATTTCTGTGTCTTTTGTCATCTGTTGTCGGGTTTCCAATTTGGTAGTACTTAAGTCGATCTTTTGGCTGTATCTCAGTATGACCTTTGAAATTATTGATGGGGTTATTTTCTTTTCTAGCCAGGATCTCAGGTATTAACGACTGTAGGTTTTACTCAATTGTTTGTTGTAGGTTGAGATCAAGAAGGCTGAACCAAAGAAAGCCTCAAACCCTTCCTCAGGTTCTGCATTTGGTAGTAACTCTAGGGTACGCACACATGGAGGTAATATGAGGGGGTACCCTGATACTTATAGTGGATTTGGAAGTGGTTATAGTCCTGCCTCCTCCTATAGGGCATTTGGAGCCTACCCTTCTAGGATGGGTGATTATGGAGGCTATGTAGGTGGTGATTATGGAGAAGGTTATGGTGGATTTGGTGGGGCTTCCAGTATGGCTGGGTATCGAGGAGAATCTTCTTATGGCTATTCTGGCCGTTATGGCTCATATGGTGGGGCTTTAGGTGGAGGATATGGTAGTGGCCTAGGGATGTTTGGCAGAGGTGATAGCTATGGTGGCGGTTCTGGTTCAGGGGCAGGTTCAGGGTCAGGGTCAGGGTCAGGTTCAGGTGCTGGCTATGACTCAGCTCCTGGCTATGGCTCAGGTCCTAGTGGATATGGAGCCGGAGCGATGTATGGAGGTAGGGAAGGCTATAGCAGCAGTAGTCGTTACCACCCCTATGCACGATAGATATCCGTAAGAGCCTTACCGTAGTATTTGCAGAGTGTCACTCATATCTCAGCATTTAAGGACTTGAAGCAGGAGATATTCCAACCATATTTCTAGATCAAGATTGTGAGACTGAATTAGTTTCATCTGCATCCATGTTTTTGATGATAGTGTTGGAATTGACTTAGCAAATCTGTGGCTGTTAGCATTTAGCACTATCTTTTATTCTCCAGTTATGTAGTTAGTTAAGATTGTGATTGACTTAGATTACTGGCGTTTTTCTTCTAATAATATAGACATTACATTTTTTGGAACATTTTGAGATTTGTTTTCATCAAGTCATTACGCAGGAAAGTTGAACAATGGGTCTCGTTTTGCCCACTAATCATCTTAGTTAGTAACTGTCAGGGGGTTAGTTACTACTATCCTTCTGTTCAACTGTTGGTAGGTATTAGCAGTCTGTCAGATTTTTTGCGACCTGTAAATTGCTTCATTGCTTGTAAAAAGGTTAATTGTCCAAAAGTATGCTTTACTAATTTAGAATTACCTCTAGGAAAATTGGCTGTTGTTTCTCTTATCCAATTCCCC

mRNA sequence

AGTATCACCCAACGAAAAGAGTGGTCGATCGAGAAACTTCGGCAACCTGTTTACTTATCTACTCAGGCTCCTCAAACGACCCCAGTCTTCTCTTATTTCCCCGCACATCAAACTTTGAAAAAAAAACCCTAGTTTCTGCAATTCCTCCCTTGCAAATCGCTTTGATTTCACAATGGTTCCCAAGAAAGCAGGCATCAATGAAGTCGACGGCGCTAGCCCAGGCAAAATTTTCGTCGGAGGATTAGCAAAAAACACAAATCTTGATACGTTTACCAAGTACTTTGAGAAGTATGGGGAAGTGATTGATAGTGTGATAATGAAAGATCGGAACACTGGACAACCAAGGGGTTTTGGGTTTATCACTTATTCTGATCCTTCTGTTGTTGATACCGTCATTAAGGAGGACCATGTGATTAATGACAAGCAGGTGGAAATCAAAAGGACAATACCTAAAGGTGCTGCACAAGCAAATGGTTTTAAGACTAAGAAGATCTTTGTTGGGGGCATTCCGACAACCGTGACAGAAGATGGTTTGAAGGACTTCTTCTCAAAGTACGGTAAAGTTGTGGAACATGAGATCATTCTTGACCATGCTACAAAGCGATCTCGAGGATTTGGTTTCGTTGTGTTTGACAATGAAAAAGTTGTAGATGATATTCTGGCTGATGGAAACATGATCGAATTGGATGGTTCAAGGGTTGAGATCAAGAAGGCTGAACCAAAGAAAGCCTCAAACCCTTCCTCAGGTTCTGCATTTGGTAGTAACTCTAGGGTACGCACACATGGAGGTAATATGAGGGGGTACCCTGATACTTATAGTGGATTTGGAAGTGGTTATAGTCCTGCCTCCTCCTATAGGGCATTTGGAGCCTACCCTTCTAGGATGGGTGATTATGGAGGCTATGTAGGTGGTGATTATGGAGAAGGTTATGGTGGATTTGGTGGGGCTTCCAGTATGGCTGGGTATCGAGGAGAATCTTCTTATGGCTATTCTGGCCGTTATGGCTCATATGGTGGGGCTTTAGGTGGAGGATATGGTAGTGGCCTAGGGATGTTTGGCAGAGGTGATAGCTATGGTGGCGGTTCTGGTTCAGGGGCAGGTTCAGGGTCAGGGTCAGGGTCAGGTTCAGGTGCTGGCTATGACTCAGCTCCTGGCTATGGCTCAGGTCCTAGTGGATATGGAGCCGGAGCGATGTATGGAGGTAGGGAAGGCTATAGCAGCAGTAGTCGTTACCACCCCTATGCACGATAGATATCCGTAAGAGCCTTACCGTAGTATTTGCAGAGTGTCACTCATATCTCAGCATTTAAGGACTTGAAGCAGGAGATATTCCAACCATATTTCTAGATCAAGATTGTGAGACTGAATTAGTTTCATCTGCATCCATGTTTTTGATGATAGTGTTGGAATTGACTTAGCAAATCTGTGGCTGTTAGCATTTAGCACTATCTTTTATTCTCCAGTTATGTAGTTAGTTAAGATTGTGATTGACTTAGATTACTGGCGTTTTTCTTCTAATAATATAGACATTACATTTTTTGGAACATTTTGAGATTTGTTTTCATCAAGTCATTACGCAGGAAAGTTGAACAATGGGTCTCGTTTTGCCCACTAATCATCTTAGTTAGTAACTGTCAGGGGGTTAGTTACTACTATCCTTCTGTTCAACTGTTGGTAGGTATTAGCAGTCTGTCAGATTTTTTGCGACCTGTAAATTGCTTCATTGCTTGTAAAAAGGTTAATTGTCCAAAAGTATGCTTTACTAATTTAGAATTACCTCTAGGAAAATTGGCTGTTGTTTCTCTTATCCAATTCCCC

Coding sequence (CDS)

ATGGTTCCCAAGAAAGCAGGCATCAATGAAGTCGACGGCGCTAGCCCAGGCAAAATTTTCGTCGGAGGATTAGCAAAAAACACAAATCTTGATACGTTTACCAAGTACTTTGAGAAGTATGGGGAAGTGATTGATAGTGTGATAATGAAAGATCGGAACACTGGACAACCAAGGGGTTTTGGGTTTATCACTTATTCTGATCCTTCTGTTGTTGATACCGTCATTAAGGAGGACCATGTGATTAATGACAAGCAGGTGGAAATCAAAAGGACAATACCTAAAGGTGCTGCACAAGCAAATGGTTTTAAGACTAAGAAGATCTTTGTTGGGGGCATTCCGACAACCGTGACAGAAGATGGTTTGAAGGACTTCTTCTCAAAGTACGGTAAAGTTGTGGAACATGAGATCATTCTTGACCATGCTACAAAGCGATCTCGAGGATTTGGTTTCGTTGTGTTTGACAATGAAAAAGTTGTAGATGATATTCTGGCTGATGGAAACATGATCGAATTGGATGGTTCAAGGGTTGAGATCAAGAAGGCTGAACCAAAGAAAGCCTCAAACCCTTCCTCAGGTTCTGCATTTGGTAGTAACTCTAGGGTACGCACACATGGAGGTAATATGAGGGGGTACCCTGATACTTATAGTGGATTTGGAAGTGGTTATAGTCCTGCCTCCTCCTATAGGGCATTTGGAGCCTACCCTTCTAGGATGGGTGATTATGGAGGCTATGTAGGTGGTGATTATGGAGAAGGTTATGGTGGATTTGGTGGGGCTTCCAGTATGGCTGGGTATCGAGGAGAATCTTCTTATGGCTATTCTGGCCGTTATGGCTCATATGGTGGGGCTTTAGGTGGAGGATATGGTAGTGGCCTAGGGATGTTTGGCAGAGGTGATAGCTATGGTGGCGGTTCTGGTTCAGGGGCAGGTTCAGGGTCAGGGTCAGGGTCAGGTTCAGGTGCTGGCTATGACTCAGCTCCTGGCTATGGCTCAGGTCCTAGTGGATATGGAGCCGGAGCGATGTATGGAGGTAGGGAAGGCTATAGCAGCAGTAGTCGTTACCACCCCTATGCACGATAG

Protein sequence

MVPKKAGINEVDGASPGKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGFGFITYSDPSVVDTVIKEDHVINDKQVEIKRTIPKGAAQANGFKTKKIFVGGIPTTVTEDGLKDFFSKYGKVVEHEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKKAEPKKASNPSSGSAFGSNSRVRTHGGNMRGYPDTYSGFGSGYSPASSYRAFGAYPSRMGDYGGYVGGDYGEGYGGFGGASSMAGYRGESSYGYSGRYGSYGGALGGGYGSGLGMFGRGDSYGGGSGSGAGSGSGSGSGSGAGYDSAPGYGSGPSGYGAGAMYGGREGYSSSSRYHPYAR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo20613.1Spo20613.1mRNA


Homology
[Close]
BLAST of Spo20613.1 vs. NCBI nr
Match: gi|902240162|gb|KNA25903.1| (hypothetical protein SOVF_002430 [Spinacia oleracea])

HSP 1 Score: 680.6 bits (1755), Expect = 1.500e-192
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 1 

		  

Query: 1   MVPKKAGINEVDGASPGKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGF 60
           MVPKKAGINEVDGASPGKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGF
Sbjct: 1   MVPKKAGINEVDGASPGKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGF 60

Query: 61  GFITYSDPSVVDTVIKEDHVINDKQVEIKRTIPKGAAQANGFKTKKIFVGGIPTTVTEDG 120
           GFITYSDPSVVDTVIKEDHVINDKQVEIKRTIPKGAAQANGFKTKKIFVGGIPTTVTEDG
Sbjct: 61  GFITYSDPSVVDTVIKEDHVINDKQVEIKRTIPKGAAQANGFKTKKIFVGGIPTTVTEDG 120

Query: 121 LKDFFSKYGKVVEHEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKK 180
           LKDFFSKYGKVVEHEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKK
Sbjct: 121 LKDFFSKYGKVVEHEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKK 180

Query: 181 AEPKKASNPSSGSAFGSNSRVRTHGGNMRGYPDTYSGFGSGYSPASSYRAFGAYPSRMGD 240
           AEPKKASNPSSGSAFGSNSRVRTHGGNMRGYPDTYSGFGSGYSPASSYRAFGAYPSRMGD
Sbjct: 181 AEPKKASNPSSGSAFGSNSRVRTHGGNMRGYPDTYSGFGSGYSPASSYRAFGAYPSRMGD 240

Query: 241 YGGYVGGDYGEGYGGFGGASSMAGYRGESSYGYSGRYGSYGGALGGGYGSGLGMFGRGDS 300
           YGGYVGGDYGEGYGGFGGASSMAGYRGESSYGYSGRYGSYGGALGGGYGSGLGMFGRGDS
Sbjct: 241 YGGYVGGDYGEGYGGFGGASSMAGYRGESSYGYSGRYGSYGGALGGGYGSGLGMFGRGDS 300

Query: 301 YGGGSGSGAGSGSGSGSGSGAGYDSAPGYGSGPSGYGAGAMYGGREGYSSSSRYHPYAR 360
           YGGGSGSGAGSGSGSGSGSGAGYDSAPGYGSGPSGYGAGAMYGGREGYSSSSRYHPYAR
Sbjct: 301 YGGGSGSGAGSGSGSGSGSGAGYDSAPGYGSGPSGYGAGAMYGGREGYSSSSRYHPYAR 359
[Close]
BLAST of Spo20613.1 vs. NCBI nr
Match: gi|731355572|ref|XP_010689212.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 548.9 bits (1413), Expect = 6.600e-153
Identity = 296/360 (82.22%), Postives = 319/360 (88.61%), Query Frame = 1 

		  

Query: 1   MVPKKAGINEVDGASPGKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGF 60
           MVPKK+GINEVDGASPGKIF+GGLAK T+LDTFTKYFEKYGEVIDSVIMKDR TG+PRGF
Sbjct: 1   MVPKKSGINEVDGASPGKIFIGGLAKETSLDTFTKYFEKYGEVIDSVIMKDRLTGRPRGF 60

Query: 61  GFITYSDPSVVDTVIKEDHVINDKQVEIKRTIPKGAAQANGFKTKKIFVGGIPTTVTEDG 120
           GFITY+DPSVVD VIKE+H+IN+KQVEIKRTIPKGAAQ+NGFKTKKIFVGGIPTTVTED 
Sbjct: 61  GFITYADPSVVDIVIKEEHIINEKQVEIKRTIPKGAAQSNGFKTKKIFVGGIPTTVTEDE 120

Query: 121 LKDFFSKYGKVVEHEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKK 180
           LK+FFS YGKVVEHEII+DHATKRSRGFGFVVFDNEKVVDDILADGNMIE++GSRVEIKK
Sbjct: 121 LKEFFSNYGKVVEHEIIVDHATKRSRGFGFVVFDNEKVVDDILADGNMIEMNGSRVEIKK 180

Query: 181 AEPKKASNPSSGSAFGSNSRVRTHGGNMRGYPDTYSGFGSGYSPASSYRAFGAYPSRMGD 240
           AEPKKAS  +SGSAFGS+SR R +G + RGYPDTYSGFGSGYSPA SYRA+GA+PSR GD
Sbjct: 181 AEPKKAS--ASGSAFGSDSRGRGYGDDFRGYPDTYSGFGSGYSPA-SYRAYGAFPSRFGD 240

Query: 241 YGGYVGGDYGEGYGGFGGASSMAGYRGESSYGYSGRYGSYGGALGGGYGSGLGMFGRGDS 300
           YGGY G DYG GYGGFGGA+S+AGYRGESSYGYSGRYGSYGG LGGGYGSGLGM+GRGD 
Sbjct: 241 YGGYGGSDYGGGYGGFGGAASVAGYRGESSYGYSGRYGSYGGGLGGGYGSGLGMYGRGDG 300

Query: 301 YGGGSGSGAGSGSGSGSGSGAGYDSAPGYGSGPSGY-GAGAMYGGREGYSSSSRYHPYAR 360
           YGGGSGSGA                  GYGSGP  Y GAGAMYG R GYSS+SRYHPYAR
Sbjct: 301 YGGGSGSGA------------------GYGSGPGAYGGAGAMYGSRGGYSSNSRYHPYAR 339
[Close]
BLAST of Spo20613.1 vs. NCBI nr
Match: gi|1009127790|ref|XP_015880881.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Ziziphus jujuba])

HSP 1 Score: 429.5 bits (1103), Expect = 5.800e-117
Identity = 246/363 (67.77%), Postives = 280/363 (77.13%), Query Frame = 1 

		  

Query: 1   MVPKKAGINEV--DGASPGKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPR 60
           M  KK   N +  DGA PGKIF+GGLAK TNL+TF KYFEKYGE+ DSVIMKDR+TG+PR
Sbjct: 1   MASKKVDRNPLSGDGACPGKIFIGGLAKETNLETFVKYFEKYGEITDSVIMKDRHTGRPR 60

Query: 61  GFGFITYSDPSVVDTVIKEDHVINDKQVEIKRTIPKGAAQANGFKTKKIFVGGIPTTVTE 120
           GFGFITY+DPSVVD VI+E HVIN KQVEIKRTIPKGA+QAN FKTKKIFVGGI TTVTE
Sbjct: 61  GFGFITYADPSVVDQVIQETHVINGKQVEIKRTIPKGASQANDFKTKKIFVGGISTTVTE 120

Query: 121 DGLKDFFSKYGKVVEHEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEI 180
           D  K FFSKYGKVVEHEII DHATKRSRGFGF+VFD+EKVVD +LA+GNM+++ GS+VEI
Sbjct: 121 DEFKSFFSKYGKVVEHEIIRDHATKRSRGFGFIVFDSEKVVDSLLANGNMVDMAGSQVEI 180

Query: 181 KKAEPKKASNPSSGSAFGSNSRVRTHGGNMRGYPDTYSGFGSGYSPASSYRAFGAYPSRM 240
           KKAEPKKASNP+   A+GS+SRVR +  +  GY D+YSGFGSG    + YR+ G + SR+
Sbjct: 181 KKAEPKKASNPAPVPAYGSDSRVRPYNDSFGGYGDSYSGFGSGAFGPAPYRSLGGFGSRL 240

Query: 241 GDYGGYVG-GDYGEGYGGFGGASSMAGYRGESSYGYSGRYGSYGGALGGGYG-SGLGMFG 300
            DYG Y    D+G G+GGFG     +GYRGESS+GYS R+GSYGG LGGGYG SGLG +G
Sbjct: 241 -DYGVYGNDNDFGGGFGGFGSGGGFSGYRGESSFGYSSRFGSYGGGLGGGYGGSGLGTYG 300

Query: 301 RGDSYGGGSGSGAGSGSGSGSGSGAGYDSAPGYGSGPSGYGAGAMYGGREGYSSSSRYHP 360
           RG           G GS  GSGSG  YDS PG    PS YG  +MYGGR GY  SSRYHP
Sbjct: 301 RGSG---------GYGSYVGSGSGGDYDSGPG----PS-YGGPSMYGGRTGYGGSSRYHP 348
[Close]
BLAST of Spo20613.1 vs. NCBI nr
Match: gi|590712491|ref|XP_007049396.1| (RNA-binding family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 421.4 bits (1082), Expect = 1.600e-114
Identity = 239/352 (67.90%), Postives = 278/352 (78.98%), Query Frame = 1 

		  

Query: 12  DGASPGKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGFGFITYSDPSVV 71
           DGASPGKIF+GGLAK+T LDTFTKYFEKYGE+ D VIMKDR+TG+PRGFGFIT++DPSVV
Sbjct: 10  DGASPGKIFIGGLAKDTTLDTFTKYFEKYGEITDFVIMKDRHTGRPRGFGFITFADPSVV 69

Query: 72  DTVIKEDHVINDKQVEIKRTIPKGAAQANGFKTKKIFVGGIPTTVTEDGLKDFFSKYGKV 131
           DTV++EDHVIN KQVEIKRTIPKG++Q+N FKTKKIFVGGIPT+VTED  K+FFSKYGKV
Sbjct: 70  DTVMQEDHVINGKQVEIKRTIPKGSSQSNDFKTKKIFVGGIPTSVTEDEFKNFFSKYGKV 129

Query: 132 VEHEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKKAEPKKASNPSS 191
           VEHEII DHATKRSRGFGF+VFD+EKVVD++LA+GNMI+++G++VEIKKAEPKKASNP+ 
Sbjct: 130 VEHEIIRDHATKRSRGFGFIVFDSEKVVDNMLANGNMIDMEGTQVEIKKAEPKKASNPAP 189

Query: 192 GSAFGSNSRVRTHGGNMRGYPDTYSGFGSGYS-PASSYRAFGAYPSRMGDYGGYVGG--D 251
           G A+GS SR R++     G+ D Y GFGSG    A+ YR+FG + SR GDYGGY GG  D
Sbjct: 190 GPAYGSESRARSYNDGYGGFGD-YGGFGSGGGFGAAPYRSFGGFGSRFGDYGGYGGGGAD 249

Query: 252 YGEGYGGF-GGASSMAGYRGESSYGYSGRYGSYGGALGGGYGSGLGMFGRGDSYGGGSGS 311
           +G  Y GF GGA + +GYRGESS+GYS R+GSY G L    GSGLG +GRG         
Sbjct: 250 FGGSYAGFGGGAGAFSGYRGESSFGYSSRFGSYAGGLS---GSGLGAYGRG--------- 309

Query: 312 GAGSGSGSGSGSGAGYDSAPGYGSGPSGYGAGAMYGGREGYSSSSRYHPYAR 360
           G G GS  GSGS   YDS PG G G    G G +YG R GY  SSRYHPYAR
Sbjct: 310 GGGYGSYGGSGSSGSYDSGPGAGFG----GPGGIYGSRTGYGGSSRYHPYAR 344
[Close]
BLAST of Spo20613.1 vs. NCBI nr
Match: gi|823122916|ref|XP_012473130.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Gossypium raimondii])

HSP 1 Score: 419.9 bits (1078), Expect = 4.600e-114
Identity = 233/353 (66.01%), Postives = 274/353 (77.62%), Query Frame = 1 

		  

Query: 9   NEVDGASPGKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGFGFITYSDP 68
           N+ DGASPGKIF+GGLAK+T L+TFTKYFEKYGE+ D VIMKDR+TG+PRGFGFIT++DP
Sbjct: 7   NDNDGASPGKIFIGGLAKDTTLETFTKYFEKYGEITDYVIMKDRHTGRPRGFGFITFADP 66

Query: 69  SVVDTVIKEDHVINDKQVEIKRTIPKGAAQANGFKTKKIFVGGIPTTVTEDGLKDFFSKY 128
           SVVDTV++EDHVIN KQVEIKRT+PKG++Q+N FKTKKIFVGGIPT+VTED  K+FFSKY
Sbjct: 67  SVVDTVMQEDHVINGKQVEIKRTVPKGSSQSNDFKTKKIFVGGIPTSVTEDEFKNFFSKY 126

Query: 129 GKVVEHEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKKAEPKKASN 188
           GKVVEHEII DHATKRSRGFGF+VFDNEKVVD++LA+GNMI+++G+RVEIKKAEPKK+SN
Sbjct: 127 GKVVEHEIICDHATKRSRGFGFIVFDNEKVVDNMLANGNMIDMEGTRVEIKKAEPKKSSN 186

Query: 189 PSSGSAFGSNSRVRTHGGNMRGYPDTYSGFGSGYSPASSYRAFGAYPSRMGDYGGYVGG- 248
           P+ G A+GS SR R++     G+ D Y GFG G      YR+FG + SR GDYGGY GG 
Sbjct: 187 PAPGPAYGSESRGRSYNDGYGGFGD-YGGFGPG-----PYRSFGGFGSRYGDYGGYGGGA 246

Query: 249 -DYGEGYGGFGGASSMAGYRGESSYGYSGRYGSYGGALGGGYGSGLGMFGRGDSYGGGSG 308
            D+G  YGGFGG    +GYRG+ S+GY  RYGSY G L    G+G+G +GRG        
Sbjct: 247 ADFGGSYGGFGGGGGFSGYRGDPSFGYGSRYGSYAGGLS---GTGIGPYGRG-------- 306

Query: 309 SGAGSGSGSGSGSGAGYDSAPGYGSGPSGYGAGAMYGGREGYSSSSRYHPYAR 360
            G G GS SGSG    YDS PG G G    G G +YG R GY  SSRYHPYAR
Sbjct: 307 -GGGYGSYSGSGPSGNYDSGPGAGFG----GPGGLYGSRSGYGGSSRYHPYAR 337
[Close]
BLAST of Spo20613.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S2H0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_002430 PE=4 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 1.000e-192
Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 1 

		  

Query: 1   MVPKKAGINEVDGASPGKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGF 60
           MVPKKAGINEVDGASPGKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGF
Sbjct: 1   MVPKKAGINEVDGASPGKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGF 60

Query: 61  GFITYSDPSVVDTVIKEDHVINDKQVEIKRTIPKGAAQANGFKTKKIFVGGIPTTVTEDG 120
           GFITYSDPSVVDTVIKEDHVINDKQVEIKRTIPKGAAQANGFKTKKIFVGGIPTTVTEDG
Sbjct: 61  GFITYSDPSVVDTVIKEDHVINDKQVEIKRTIPKGAAQANGFKTKKIFVGGIPTTVTEDG 120

Query: 121 LKDFFSKYGKVVEHEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKK 180
           LKDFFSKYGKVVEHEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKK
Sbjct: 121 LKDFFSKYGKVVEHEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKK 180

Query: 181 AEPKKASNPSSGSAFGSNSRVRTHGGNMRGYPDTYSGFGSGYSPASSYRAFGAYPSRMGD 240
           AEPKKASNPSSGSAFGSNSRVRTHGGNMRGYPDTYSGFGSGYSPASSYRAFGAYPSRMGD
Sbjct: 181 AEPKKASNPSSGSAFGSNSRVRTHGGNMRGYPDTYSGFGSGYSPASSYRAFGAYPSRMGD 240

Query: 241 YGGYVGGDYGEGYGGFGGASSMAGYRGESSYGYSGRYGSYGGALGGGYGSGLGMFGRGDS 300
           YGGYVGGDYGEGYGGFGGASSMAGYRGESSYGYSGRYGSYGGALGGGYGSGLGMFGRGDS
Sbjct: 241 YGGYVGGDYGEGYGGFGGASSMAGYRGESSYGYSGRYGSYGGALGGGYGSGLGMFGRGDS 300

Query: 301 YGGGSGSGAGSGSGSGSGSGAGYDSAPGYGSGPSGYGAGAMYGGREGYSSSSRYHPYAR 360
           YGGGSGSGAGSGSGSGSGSGAGYDSAPGYGSGPSGYGAGAMYGGREGYSSSSRYHPYAR
Sbjct: 301 YGGGSGSGAGSGSGSGSGSGAGYDSAPGYGSGPSGYGAGAMYGGREGYSSSSRYHPYAR 359
[Close]
BLAST of Spo20613.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BM46_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g206040 PE=4 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 4.600e-153
Identity = 296/360 (82.22%), Postives = 319/360 (88.61%), Query Frame = 1 

		  

Query: 1   MVPKKAGINEVDGASPGKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGF 60
           MVPKK+GINEVDGASPGKIF+GGLAK T+LDTFTKYFEKYGEVIDSVIMKDR TG+PRGF
Sbjct: 1   MVPKKSGINEVDGASPGKIFIGGLAKETSLDTFTKYFEKYGEVIDSVIMKDRLTGRPRGF 60

Query: 61  GFITYSDPSVVDTVIKEDHVINDKQVEIKRTIPKGAAQANGFKTKKIFVGGIPTTVTEDG 120
           GFITY+DPSVVD VIKE+H+IN+KQVEIKRTIPKGAAQ+NGFKTKKIFVGGIPTTVTED 
Sbjct: 61  GFITYADPSVVDIVIKEEHIINEKQVEIKRTIPKGAAQSNGFKTKKIFVGGIPTTVTEDE 120

Query: 121 LKDFFSKYGKVVEHEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKK 180
           LK+FFS YGKVVEHEII+DHATKRSRGFGFVVFDNEKVVDDILADGNMIE++GSRVEIKK
Sbjct: 121 LKEFFSNYGKVVEHEIIVDHATKRSRGFGFVVFDNEKVVDDILADGNMIEMNGSRVEIKK 180

Query: 181 AEPKKASNPSSGSAFGSNSRVRTHGGNMRGYPDTYSGFGSGYSPASSYRAFGAYPSRMGD 240
           AEPKKAS  +SGSAFGS+SR R +G + RGYPDTYSGFGSGYSPA SYRA+GA+PSR GD
Sbjct: 181 AEPKKAS--ASGSAFGSDSRGRGYGDDFRGYPDTYSGFGSGYSPA-SYRAYGAFPSRFGD 240

Query: 241 YGGYVGGDYGEGYGGFGGASSMAGYRGESSYGYSGRYGSYGGALGGGYGSGLGMFGRGDS 300
           YGGY G DYG GYGGFGGA+S+AGYRGESSYGYSGRYGSYGG LGGGYGSGLGM+GRGD 
Sbjct: 241 YGGYGGSDYGGGYGGFGGAASVAGYRGESSYGYSGRYGSYGGGLGGGYGSGLGMYGRGDG 300

Query: 301 YGGGSGSGAGSGSGSGSGSGAGYDSAPGYGSGPSGY-GAGAMYGGREGYSSSSRYHPYAR 360
           YGGGSGSGA                  GYGSGP  Y GAGAMYG R GYSS+SRYHPYAR
Sbjct: 301 YGGGSGSGA------------------GYGSGPGAYGGAGAMYGSRGGYSSNSRYHPYAR 339
[Close]
BLAST of Spo20613.1 vs. UniProtKB/TrEMBL
Match: A0A061DU90_THECC (RNA-binding family protein isoform 1 OS=Theobroma cacao GN=TCM_002445 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 1.100e-114
Identity = 239/352 (67.90%), Postives = 278/352 (78.98%), Query Frame = 1 

		  

Query: 12  DGASPGKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGFGFITYSDPSVV 71
           DGASPGKIF+GGLAK+T LDTFTKYFEKYGE+ D VIMKDR+TG+PRGFGFIT++DPSVV
Sbjct: 10  DGASPGKIFIGGLAKDTTLDTFTKYFEKYGEITDFVIMKDRHTGRPRGFGFITFADPSVV 69

Query: 72  DTVIKEDHVINDKQVEIKRTIPKGAAQANGFKTKKIFVGGIPTTVTEDGLKDFFSKYGKV 131
           DTV++EDHVIN KQVEIKRTIPKG++Q+N FKTKKIFVGGIPT+VTED  K+FFSKYGKV
Sbjct: 70  DTVMQEDHVINGKQVEIKRTIPKGSSQSNDFKTKKIFVGGIPTSVTEDEFKNFFSKYGKV 129

Query: 132 VEHEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKKAEPKKASNPSS 191
           VEHEII DHATKRSRGFGF+VFD+EKVVD++LA+GNMI+++G++VEIKKAEPKKASNP+ 
Sbjct: 130 VEHEIIRDHATKRSRGFGFIVFDSEKVVDNMLANGNMIDMEGTQVEIKKAEPKKASNPAP 189

Query: 192 GSAFGSNSRVRTHGGNMRGYPDTYSGFGSGYS-PASSYRAFGAYPSRMGDYGGYVGG--D 251
           G A+GS SR R++     G+ D Y GFGSG    A+ YR+FG + SR GDYGGY GG  D
Sbjct: 190 GPAYGSESRARSYNDGYGGFGD-YGGFGSGGGFGAAPYRSFGGFGSRFGDYGGYGGGGAD 249

Query: 252 YGEGYGGF-GGASSMAGYRGESSYGYSGRYGSYGGALGGGYGSGLGMFGRGDSYGGGSGS 311
           +G  Y GF GGA + +GYRGESS+GYS R+GSY G L    GSGLG +GRG         
Sbjct: 250 FGGSYAGFGGGAGAFSGYRGESSFGYSSRFGSYAGGLS---GSGLGAYGRG--------- 309

Query: 312 GAGSGSGSGSGSGAGYDSAPGYGSGPSGYGAGAMYGGREGYSSSSRYHPYAR 360
           G G GS  GSGS   YDS PG G G    G G +YG R GY  SSRYHPYAR
Sbjct: 310 GGGYGSYGGSGSSGSYDSGPGAGFG----GPGGIYGSRTGYGGSSRYHPYAR 344
[Close]
BLAST of Spo20613.1 vs. UniProtKB/TrEMBL
Match: A0A0D2QN42_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G098600 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 3.200e-114
Identity = 233/353 (66.01%), Postives = 274/353 (77.62%), Query Frame = 1 

		  

Query: 9   NEVDGASPGKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGFGFITYSDP 68
           N+ DGASPGKIF+GGLAK+T L+TFTKYFEKYGE+ D VIMKDR+TG+PRGFGFIT++DP
Sbjct: 7   NDNDGASPGKIFIGGLAKDTTLETFTKYFEKYGEITDYVIMKDRHTGRPRGFGFITFADP 66

Query: 69  SVVDTVIKEDHVINDKQVEIKRTIPKGAAQANGFKTKKIFVGGIPTTVTEDGLKDFFSKY 128
           SVVDTV++EDHVIN KQVEIKRT+PKG++Q+N FKTKKIFVGGIPT+VTED  K+FFSKY
Sbjct: 67  SVVDTVMQEDHVINGKQVEIKRTVPKGSSQSNDFKTKKIFVGGIPTSVTEDEFKNFFSKY 126

Query: 129 GKVVEHEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKKAEPKKASN 188
           GKVVEHEII DHATKRSRGFGF+VFDNEKVVD++LA+GNMI+++G+RVEIKKAEPKK+SN
Sbjct: 127 GKVVEHEIICDHATKRSRGFGFIVFDNEKVVDNMLANGNMIDMEGTRVEIKKAEPKKSSN 186

Query: 189 PSSGSAFGSNSRVRTHGGNMRGYPDTYSGFGSGYSPASSYRAFGAYPSRMGDYGGYVGG- 248
           P+ G A+GS SR R++     G+ D Y GFG G      YR+FG + SR GDYGGY GG 
Sbjct: 187 PAPGPAYGSESRGRSYNDGYGGFGD-YGGFGPG-----PYRSFGGFGSRYGDYGGYGGGA 246

Query: 249 -DYGEGYGGFGGASSMAGYRGESSYGYSGRYGSYGGALGGGYGSGLGMFGRGDSYGGGSG 308
            D+G  YGGFGG    +GYRG+ S+GY  RYGSY G L    G+G+G +GRG        
Sbjct: 247 ADFGGSYGGFGGGGGFSGYRGDPSFGYGSRYGSYAGGLS---GTGIGPYGRG-------- 306

Query: 309 SGAGSGSGSGSGSGAGYDSAPGYGSGPSGYGAGAMYGGREGYSSSSRYHPYAR 360
            G G GS SGSG    YDS PG G G    G G +YG R GY  SSRYHPYAR
Sbjct: 307 -GGGYGSYSGSGPSGNYDSGPGAGFG----GPGGLYGSRSGYGGSSRYHPYAR 337
[Close]
BLAST of Spo20613.1 vs. UniProtKB/TrEMBL
Match: M5XCJ4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007812mg PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 4.200e-114
Identity = 240/369 (65.04%), Postives = 276/369 (74.80%), Query Frame = 1 

		  

Query: 1   MVPKKAGIN--EVDGASPGKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPR 60
           M  KK+  N    DGASPGKIF+GGLAK+T LDTF KYFEKYGE+IDSVIMKDR TG+PR
Sbjct: 1   MASKKSNHNPHSGDGASPGKIFIGGLAKDTTLDTFVKYFEKYGEIIDSVIMKDRQTGRPR 60

Query: 61  GFGFITYSDPSVVDTVIKEDHVINDKQVEIKRTIPKGAAQANGFKTKKIFVGGIPTTVTE 120
           GFGFITY+DPSVVD V++E HVINDKQVEIKRTIPKG+ Q N FKTKKIFVGGIPTTVTE
Sbjct: 61  GFGFITYADPSVVDQVMEETHVINDKQVEIKRTIPKGSGQGNDFKTKKIFVGGIPTTVTE 120

Query: 121 DGLKDFFSKYGKVVEHEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEI 180
           D  K FFS++GKVVEHEII DH TKRSRGFGFVVFDNEKVVD++LA+GN I++ G++VEI
Sbjct: 121 DEFKSFFSQFGKVVEHEIIRDHVTKRSRGFGFVVFDNEKVVDNVLANGNRIDMAGTQVEI 180

Query: 181 KKAEPKKASNPSSGSAFGSNSRVRTHGGNMRGYPDTYSGFG------SGYSPASSYRAFG 240
           KKA PKKASNP+   AFGS+SR   +  +  G+ D+ SGFG       GY PA SYR+ G
Sbjct: 181 KKASPKKASNPAHVPAFGSDSRAHPYNDSFGGFGDSMSGFGPGGYGAGGYGPA-SYRSLG 240

Query: 241 AYPSRMGDYGGYV-GGDYGEGYGGFGGASSMAGYRGESSYGYSGRYGSYGGALGGGY-GS 300
            + SR GDYGGY  G D+G G+GGFGG  + +GYRGESS+GYS R+GSYGG +GGGY GS
Sbjct: 241 GFGSRFGDYGGYPDGNDFGGGFGGFGGGGAFSGYRGESSFGYSSRFGSYGGGIGGGYGGS 300

Query: 301 GLGMFGRGDSYGGGSGSGAGSGSGSGSGSGAGYDSAPGYGSGPSGYGAGAMYGGREGYSS 360
           GLG +GR            G G   GSGS  GYDS PG   G    G  ++YG R GY  
Sbjct: 301 GLGAYGR---------EARGYGGYDGSGSADGYDSGPGASYG----GTRSLYGSRAGYGG 355
[Close]
BLAST of Spo20613.1 vs. ExPASy Swiss-Prot
Match: RNP1_ARATH (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana GN=RNP1 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 8.300e-39
Identity = 130/344 (37.79%), Postives = 180/344 (52.33%), Query Frame = 1 

		  

Query: 17  GKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGFGFITYSDPSVVDTVIK 76
           GK+FVGG++  T+ D   ++F  YGEV  +++M+D+ TG+PRGFGF+ +SDPSV+D V++
Sbjct: 6   GKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ 65

Query: 77  EDHVINDKQVEIKRTIPKGAAQANG----------------FKTKKIFVGGIPTTVTEDG 136
           E H I+ ++V++KR + +   Q +G                 KTKKIFVGG+P T+T++ 
Sbjct: 66  EKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEE 125

Query: 137 LKDFFSKYGKVVEHEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKK 196
            + +F  YG V +  I+ D AT R RGFGFV FD+E  VD +L      +L G +VE+K+
Sbjct: 126 FRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVL-HKTFHDLSGKQVEVKR 185

Query: 197 AEPKKASNPSSGSAFGSNSRVRTHGGNMRGYPDTYSGFGSGYSPASSYRAFGAYPSRMGD 256
           A PK A NP  G         R+ GG   G    Y G  S Y        F  + S    
Sbjct: 186 ALPKDA-NPGGGG--------RSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSVGNG 245

Query: 257 YGGYVGGDYGEGYGGFGGASSMAGYRGESSYGYSGRYGSYGGALGGGYGSGLGMFGRGDS 316
              Y    YG GY   G  S+ AGY         G YG Y G+  GGYG+G         
Sbjct: 246 LPSYGSSGYGAGY---GNGSNGAGY---------GAYGGYTGS-AGGYGAGATA-----G 305

Query: 317 YGGGSGSGAGSGSGSGSGSGAGYDSAPGYGSGPSGYGAGAMYGG 345
           YG  +  GAG GS +G      +D+    G G  GYG+GA + G
Sbjct: 306 YGATNIPGAGYGSSTGVAPRNSWDTPASSGYGNPGYGSGAAHSG 321
[Close]
BLAST of Spo20613.1 vs. ExPASy Swiss-Prot
Match: HRP1_YEAST (Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HRP1 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 7.300e-35
Identity = 88/229 (38.43%), Postives = 129/229 (56.33%), Query Frame = 1 

		  

Query: 18  KIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGFGFITYSDPSVVDTVIKE 77
           K+F+GGL  +T  D   +YF KYG V D  IMKD  TG+ RGFGF+++  PS VD V+K 
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219

Query: 78  DHVINDKQVEIKRTIPKGAAQANGFKTKKIFVGGIPTTVTEDGLKDFFSKYGKVVEHEII 137
            H+++ K ++ KR IP+        KT KIFVGGI   V     ++FFS++G +++ +++
Sbjct: 220 QHILDGKVIDPKRAIPRDEQD----KTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLM 279

Query: 138 LDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKKAEPKKASNPSS--GSAF 197
           LD  T +SRGFGFV +D+   VD +      I+    ++EIK+AEP+     SS  G   
Sbjct: 280 LDKDTGQSRGFGFVTYDSADAVDRV-CQNKFIDFKDRKIEIKRAEPRHMQQKSSNNGGNN 339

Query: 198 GSNSRVRTHG--GNMRGYPDTYSG-FGSGYSPASSYRAFGAYPSRMGDY 242
           G N+  R  G  GN   +   Y      GY+P  + +A   Y  +M +Y
Sbjct: 340 GGNNMNRRGGNFGNQGDFNQMYQNPMMGGYNPMMNPQAMTDYYQKMQEY 383
[Close]
BLAST of Spo20613.1 vs. ExPASy Swiss-Prot
Match: DAZP1_XENLA (DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.100e-33
Identity = 89/259 (34.36%), Postives = 137/259 (52.90%), Query Frame = 1 

		  

Query: 8   INEVDGASPGKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGFGFITYSD 67
           +N   G   GK+FVGGL  +T  +T   YF +YGEV+D VIMKD+ T Q RGFGF+ + D
Sbjct: 1   MNNQGGDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKD 60

Query: 68  PSVVDTVI-KEDHVINDKQVEIKRTIPKG---------------AAQANGFKTKKIFVGG 127
           P+ V TV+    H ++ + ++ K   P+G                 +    ++ KIFVGG
Sbjct: 61  PNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGG 120

Query: 128 IPTTVTEDGLKDFFSKYGKVVEHEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIEL 187
           IP    E  LK++F+++G V E  +I D   +R RGFGF+ F++E+ VD  + + +  ++
Sbjct: 121 IPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHFHDI 180

Query: 188 DGSRVEIKKAEPKKASN----PSSGSAFGSNSRVRTHGGNMRGYPDTYSGFGSGYSPASS 247
            G +VE+K+AEP+ + +    P   + +GS +   T  G     P T+     GYSP   
Sbjct: 181 MGKKVEVKRAEPRDSKSQTPGPPGSNQWGSRAMQSTANGWTGQPPQTW----QGYSPQGM 240
[Close]
BLAST of Spo20613.1 vs. ExPASy Swiss-Prot
Match: ROA1_SCHAM (Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog OS=Schistocerca americana GN=HNRNP PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.900e-33
Identity = 138/351 (39.32%), Postives = 183/351 (52.14%), Query Frame = 1 

		  

Query: 18  KIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGFGFITYSDPSVVDTVIK- 77
           K+F+GGL   T  ++  ++FE++GE++D V+MKD  T + RGFGFITYS   +VD     
Sbjct: 18  KLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNA 77

Query: 78  EDHVINDKQVEIKRTIPK---GAAQANGFKTKKIFVGGIPTTVTEDGLKDFFSKYGKVVE 137
             H ++ + VE KR +P+   G  +A G   KK+FVGGI   + E+ L+D+F +YG VV 
Sbjct: 78  RPHKVDGRVVEPKRAVPRTEIGRPEA-GATVKKLFVGGIKEEMEENDLRDYFKQYGTVVS 137

Query: 138 HEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKKAEPKKASNPSSGS 197
             I++D  T++ RGF FV FD+   VD I    N  ++ G  +++KKA PK       G 
Sbjct: 138 AAIVVDKETRKKRGFAFVEFDDYDPVDKICLSRNH-QIRGKHIDVKKALPK-------GD 197

Query: 198 AFGSNSRVRTHGGNMRGYPDTYSGFGSGYSPASSYRAFGAYPSRMGDYGGYVGGDYGEGY 257
           A G        GG  RG      G G G        A G +    GD+GG  GG    G 
Sbjct: 198 APGG------RGGGGRG------GVGGG--------AGGGWGGGRGDWGGSAGGG---GG 257

Query: 258 GGFGGASSMAGYRGESSYGYSGRYGSYGGALGGG--YGSGLGMFGRGDSYGGGSGSGAGS 317
           GG+GGA      RG    G   R+G  GG +GGG  +G G GM G GD YGGG G     
Sbjct: 258 GGWGGADPWENGRG----GGGDRWGGGGGGMGGGDRWGGGGGM-GGGDRYGGGGGR---- 317

Query: 318 GSGSGSGSGAGYDSAP---GYGSG-PSGYGAGAMYGGREGYSSSSRYHPYA 359
              SG  S  GY+S P   G+G G    YG GA+ G   GY   SR  PY+
Sbjct: 318 ---SGGWSNDGYNSGPQSDGFGGGYKQSYGGGAVRGS-SGY-GGSRSAPYS 322
[Close]
BLAST of Spo20613.1 vs. ExPASy Swiss-Prot
Match: MSIR6_DROME (RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster GN=Rbp6 PE=2 SV=3)

HSP 1 Score: 140.2 bits (352), Expect = 4.400e-32
Identity = 83/245 (33.88%), Postives = 136/245 (55.51%), Query Frame = 1 

		  

Query: 16  PGKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGFGFITYSDPSVVDTVI 75
           PGK+F+GGL+  T+ ++   YF +YG++ ++++MKD  T + RGFGF+T+SDP+ VD V+
Sbjct: 28  PGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVL 87

Query: 76  KE-DHVINDKQVEIKRTIPKGAAQANGFKTKKIFVGGIPTTVTEDGLKDFFSKYGKVVEH 135
            +  H ++ K+V+ K   P+ A      +TKKIFVGG+    T + +K +F ++G + + 
Sbjct: 88  TQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDA 147

Query: 136 EIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKKAEPKKASNPSSGSA 195
            ++ D  T R RGFGFV F +E VVD +  + +  E++   VE KKA+PK+   P+    
Sbjct: 148 MLMFDKQTNRHRGFGFVTFQSEDVVDKV-CEIHFHEINNKMVECKKAQPKEVMLPA---- 207

Query: 196 FGSNSRVRTHGGNMRGYPDTYSGFGS---GYSPASSYRAFGAYPSRMGDYGGYVGGDYGE 255
               +  +T       Y +   G G+   G+ PA++Y A+ A                G 
Sbjct: 208 ----NLAKTRAAGRSAYDNIMWGLGTLPEGF-PAAAYAAYAA----------------GR 246

Query: 256 GYGGF 257
           GY G+
Sbjct: 268 GYSGY 246
[Close]
BLAST of Spo20613.1 vs. TAIR (Arabidopsis)
Match: AT3G13224.2 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 317.4 bits (812), Expect = 1.100e-86
Identity = 206/356 (57.87%), Postives = 243/356 (68.26%), Query Frame = 1 

		  

Query: 12  DGASPGKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGFGFITYSDPSVV 71
           DGASPGKIF+GGL K+T    F K+F KYGE+ DSVIM+DR+TGQPRGFGFIT++DPSVV
Sbjct: 14  DGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVV 73

Query: 72  DTVIKEDHVINDKQVEIKRTIPKGAA--QANGFKTKKIFVGGIPTTVTEDGLKDFFSKYG 131
           D VI++ HVIN KQVEIKRTIPKGA   Q+   KTKKIFVGGIP+TVTED LKDFF+KYG
Sbjct: 74  DKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTVTEDELKDFFAKYG 133

Query: 132 KVVEHEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKKAEPKKASNP 191
            VVEH++I DH T RSRGFGFV+FD+E+VVD++L+ GNMI++  ++VEIKKAEPKK+ N 
Sbjct: 134 NVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVEIKKAEPKKSLNR 193

Query: 192 SSGSAFGSNSRVRTHGGNMRGYPDTYSGFGSGYS-PASSYRAFGAYPSR-MGDYG---GY 251
           S  S +GS+ R R+   +   Y   Y GF  GY  P    R+ G   SR  G YG   G 
Sbjct: 194 SPPS-YGSHPRGRSSNDSYASYGGPYGGFDGGYGHPPGPIRSHGGPASRYAGGYGYGRGS 253

Query: 252 VGGDYGEGYGGFGGASSMAGYRGESSYGYSGRYGSYGGALGG-GYGSGLGMFGRGDSYGG 311
           VG ++G GY  +GG  S+ GYR E   GYS R+G YG   GG GYG G    G G   G 
Sbjct: 254 VGPEFGGGYNNYGG-GSLGGYRNEPPLGYSSRFGPYGSGFGGEGYGRG----GEGAYLGY 313

Query: 312 GSGSGAGSGSGSGSGSGAGYDSAPGYGSGPSGYGAGAMYGGREGYSSSSRYHPYAR 360
             G G G G   G G G  Y+S    G G S  GAG  YG   GYSSSSRYHPYAR
Sbjct: 314 PRGGGEGYGGYGGPGYGGAYESG---GPGGSYEGAGGPYG--RGYSSSSRYHPYAR 358
[Close]
BLAST of Spo20613.1 vs. TAIR (Arabidopsis)
Match: AT5G40490.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 253.4 bits (646), Expect = 2.000e-67
Identity = 189/403 (46.90%), Postives = 231/403 (57.32%), Query Frame = 1 

		  

Query: 15  SPGKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGFGFITYSDPSVVDTV 74
           S GKIFVGGLA+ T    F K+F KYGE+ DSVIMKDR TGQPRGFGF+TY+D SVVD V
Sbjct: 40  SAGKIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKV 99

Query: 75  IKEDHVINDKQVEIKRTIPKGAAQANGFKTKKIFVGGIPTTVTEDGLKDFFSKYGKVVEH 134
           I+++H+I  KQVEIKRTIP+G+  +N FKTKKIFVGGIP++V +D  K+FF ++G++ EH
Sbjct: 100 IQDNHIIIGKQVEIKRTIPRGSMSSNDFKTKKIFVGGIPSSVDDDEFKEFFMQFGELKEH 159

Query: 135 EIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKKAEPKKASNPSSGSA 194
           +I+ DH+T RSRGFGFV +++E +VD +LA GN IEL G++VEIKKAEPKK ++ ++ S 
Sbjct: 160 QIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIKKAEPKKPNSVTTPSK 219

Query: 195 FGSNSRVRTHGGNMRGYPDTYSGFGSGY-SPASSYRAFGAYPSRMGDYGGYVGGDYGEG- 254
              +SR    GG   GY     G G GY  P   Y++ G Y       GG  GG  G G 
Sbjct: 220 RFGDSRSNFGGGYGDGYG---GGHGGGYGGPGGPYKSGGGYG------GGRSGGYGGYGG 279

Query: 255 -YGGFGGASSMAG---YRGESSYGYSGRYGSYGGALGGGYGSGLGMFGRGDSYGGGSGSG 314
            +GG+GG     G   YRGE + GYSGRYG  GG  GGGY  G      G S GGG G G
Sbjct: 280 EFGGYGGGGYGGGVGPYRGEPALGYSGRYG--GG--GGGYNRG------GYSMGGGGGYG 339

Query: 315 AGSG---SGSGSGSGAGYDSAPG------------------------------------- 360
            G G    GS    G GY    G                                     
Sbjct: 340 GGPGDMYGGSYGEPGGGYGGPSGSYGGGYGSSGIGGYGGGMGGAGGGGYRGGGGYDMGGV 399
[Close]
BLAST of Spo20613.1 vs. TAIR (Arabidopsis)
Match: AT1G17640.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 205.7 bits (522), Expect = 4.800e-53
Identity = 147/349 (42.12%), Postives = 203/349 (58.17%), Query Frame = 1 

		  

Query: 14  ASPGKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGFGFITYSDPSVVDT 73
           +SPGK+FVGG++  T  +TF  YF K+GEV+DSVIM DR TG PRGFGF+T++D +V + 
Sbjct: 63  SSPGKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEK 122

Query: 74  VIKEDHVINDKQVEIKRTIPKGAAQAN---GFKTKKIFVGGIPTTVTEDGLKDFFSKYGK 133
           V++EDHVI+D++V++KRT+P+G    +     KT+KIFVGG+P  + ED LK++F  YG 
Sbjct: 123 VLEEDHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGD 182

Query: 134 VVEHEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKKAEPKKASNPS 193
           ++EH+I+ DH T RSRGFGFV F  E  VD + +DG + EL   +VEIK+AEPK+    +
Sbjct: 183 IIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRTGRDN 242

Query: 194 SGSAFGSNSRVRTHGGNMRGYPDTYSGFGSGYSPASSYRAFGAYPSRMGDYGGYVGGDYG 253
           S  ++G++ +            D+YSG  +                   DY  Y G  YG
Sbjct: 243 SFRSYGASGKY--------DQEDSYSGKAN------------------EDYSMYSG--YG 302

Query: 254 EGYGGFGGASSMAGYRGESSYGYSGRYGSYGGALGGGYGSGLGMFGRGDSYGGGSGSGAG 313
            GYGG+G       Y G S    +G YG YGG  G GYG G  MF    + G G+G  + 
Sbjct: 303 -GYGGYG------AYAGNSMVNPAGFYG-YGGGYGYGYGYGGQMF----NMGYGAGGYSH 362

Query: 314 SGSGSGSGSGAGYDSAPGYGSGPSGYGAGAMYGGREGYSSSSRYHPYAR 360
            GSG G  + A Y     +G+G +G  +G   G     S   RYHPY +
Sbjct: 363 MGSGYGVAAAAAYGGGKSHGNGNNGSSSGK--GNGTNGSGPDRYHPYQK 369
[Close]
BLAST of Spo20613.1 vs. TAIR (Arabidopsis)
Match: AT4G14300.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 162.5 bits (410), Expect = 4.700e-40
Identity = 130/344 (37.79%), Postives = 180/344 (52.33%), Query Frame = 1 

		  

Query: 17  GKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGFGFITYSDPSVVDTVIK 76
           GK+FVGG++  T+ D   ++F  YGEV  +++M+D+ TG+PRGFGF+ +SDPSV+D V++
Sbjct: 6   GKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ 65

Query: 77  EDHVINDKQVEIKRTIPKGAAQANG----------------FKTKKIFVGGIPTTVTEDG 136
           E H I+ ++V++KR + +   Q +G                 KTKKIFVGG+P T+T++ 
Sbjct: 66  EKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEE 125

Query: 137 LKDFFSKYGKVVEHEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKK 196
            + +F  YG V +  I+ D AT R RGFGFV FD+E  VD +L      +L G +VE+K+
Sbjct: 126 FRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVL-HKTFHDLSGKQVEVKR 185

Query: 197 AEPKKASNPSSGSAFGSNSRVRTHGGNMRGYPDTYSGFGSGYSPASSYRAFGAYPSRMGD 256
           A PK A NP  G         R+ GG   G    Y G  S Y        F  + S    
Sbjct: 186 ALPKDA-NPGGGG--------RSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSVGNG 245

Query: 257 YGGYVGGDYGEGYGGFGGASSMAGYRGESSYGYSGRYGSYGGALGGGYGSGLGMFGRGDS 316
              Y    YG GY   G  S+ AGY         G YG Y G+  GGYG+G         
Sbjct: 246 LPSYGSSGYGAGY---GNGSNGAGY---------GAYGGYTGS-AGGYGAGATA-----G 305

Query: 317 YGGGSGSGAGSGSGSGSGSGAGYDSAPGYGSGPSGYGAGAMYGG 345
           YG  +  GAG GS +G      +D+    G G  GYG+GA + G
Sbjct: 306 YGATNIPGAGYGSSTGVAPRNSWDTPASSGYGNPGYGSGAAHSG 321
[Close]
BLAST of Spo20613.1 vs. TAIR (Arabidopsis)
Match: AT2G33410.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 141.7 bits (356), Expect = 8.600e-34
Identity = 128/366 (34.97%), Postives = 189/366 (51.64%), Query Frame = 1 

		  

Query: 17  GKIFVGGLAKNTNLDTFTKYFEKYGEVIDSVIMKDRNTGQPRGFGFITYSDPSVVDTVIK 76
           GK+F+GG++ +T+ +   +YF  +GEV+   +M+++ TG+PRGFGF+ +SDP+V+D V++
Sbjct: 6   GKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRVLQ 65

Query: 77  EDHVINDKQVEIKRTIPKGAAQANG----------------FKTKKIFVGGIPTTVTEDG 136
           + H I+++ V++KR + +      G                 +TKKIFVGG+P  +T D 
Sbjct: 66  DKHHIDNRDVDVKRAMSREEQSPAGRSGTFNASRNFDSGANVRTKKIFVGGLPPALTSDE 125

Query: 137 LKDFFSKYGKVVEHEIILDHATKRSRGFGFVVFDNEKVVDDILADGNMIELDGSRVEIKK 196
            + +F  YG V +  I++D  T+R RGFGFV FD+E  VD +L      +L+G +VE+K+
Sbjct: 126 FRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHK-TFHDLNGKQVEVKR 185

Query: 197 AEPKKASNPSSGSAFGSNSRVRTHGGNMRGYPDTYSGFGSGYSPASSYRAFGAYPSRMGD 256
           A PK A NP   S  G  S      G   G+P      GSGY        +    +    
Sbjct: 186 ALPKDA-NPGIASGGGRGS------GGAGGFPGYGGSGGSGYEGRVDSNRYMQPQNTGSG 245

Query: 257 YGGYVGGDYGEGYGGFGGASSMAGYRGESSYGYSGRYGSYGGALGGGYGS----GLGMFG 316
           Y  Y G  YG GYG            G +  GY G +G YG   G  YG+    G G FG
Sbjct: 246 YPPYGGSGYGTGYG-----------YGSNGVGYGG-FGGYGNPAGAPYGNPSVPGAG-FG 305

Query: 317 RG--DSYGGGSGSGAGS-GSGSGS---GSGAGYDSAPGYGSGPSGYGA-GAMYGGRE-GY 355
            G   S+G  + SG G+ G G+ +   GSG    +  G     +GYG+ G  YGG +  Y
Sbjct: 306 SGPRSSWGAQAPSGYGNVGYGNAAPWGGSGGPGSAVMGQAGASAGYGSQGYGYGGNDSSY 350
The following BLAST results are available for this feature:
BLAST of Spo20613.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902240162|gb|KNA25903.1|1.5e-192100.hypothetical protein SOVF_0024... [more]
gi|731355572|ref|XP_010689212.1|6.6e-15382.2PREDICTED: heterogeneous nucle... [more]
gi|1009127790|ref|XP_015880881.1|5.8e-11767.7PREDICTED: heterogeneous nucle... [more]
gi|590712491|ref|XP_007049396.1|1.6e-11467.9RNA-binding family protein iso... [more]
gi|823122916|ref|XP_012473130.1|4.6e-11466.0PREDICTED: heterogeneous nucle... [more]
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BLAST of Spo20613.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9S2H0_SPIOL1.0e-192100.Uncharacterized protein OS=Spi... [more]
A0A0J8BM46_BETVU4.6e-15382.2Uncharacterized protein OS=Bet... [more]
A0A061DU90_THECC1.1e-11467.9RNA-binding family protein iso... [more]
A0A0D2QN42_GOSRA3.2e-11466.0Uncharacterized protein OS=Gos... [more]
M5XCJ4_PRUPE4.2e-11465.0Uncharacterized protein OS=Pru... [more]
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BLAST of Spo20613.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RNP1_ARATH8.3e-3937.7Heterogeneous nuclear ribonucl... [more]
HRP1_YEAST7.3e-3538.4Nuclear polyadenylated RNA-bin... [more]
DAZP1_XENLA3.1e-3334.3DAZ-associated protein 1 OS=Xe... [more]
ROA1_SCHAM8.9e-3339.3Heterogeneous nuclear ribonucl... [more]
MSIR6_DROME4.4e-3233.8RNA-binding protein Musashi ho... [more]
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BLAST of Spo20613.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G13224.21.1e-8657.8RNA-binding (RRM/RBD/RNP motif... [more]
AT5G40490.12.0e-6746.9RNA-binding (RRM/RBD/RNP motif... [more]
AT1G17640.14.8e-5342.1RNA-binding (RRM/RBD/RNP motif... [more]
AT4G14300.14.7e-4037.7RNA-binding (RRM/RBD/RNP motif... [more]
AT2G33410.18.6e-3434.9RNA-binding (RRM/RBD/RNP motif... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 19..76
score: 2.0E-12coord: 107..176
score: 3.5
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 18..89
score: 1.8E-19coord: 106..179
score: 1.4
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 17..93
score: 15.102coord: 105..183
score: 18
IPR012677Nucleotide-binding alpha-beta plait domainGENE3D3.30.70.330coord: 99..191
score: 7.3E-25coord: 10..98
score: 5.3
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 102..209
score: 3.22E-26coord: 11..96
score: 4.21
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 9..347
score: 3.3E
NoneNo IPR availablePANTHERPTHR24012:SF318RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINcoord: 9..347
score: 3.3E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0018149 peptide cross-linking
biological_process GO:0009616 virus induced gene silencing
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0043069 negative regulation of programmed cell death
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0000165 MAPK cascade
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0050832 defense response to fungus
biological_process GO:0042742 defense response to bacterium
biological_process GO:0052542 defense response by callose deposition
biological_process GO:0044237 cellular metabolic process
biological_process GO:0010050 vegetative phase change
biological_process GO:0002679 respiratory burst involved in defense response
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0010364 regulation of ethylene biosynthetic process
biological_process GO:0016567 protein ubiquitination
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0010073 meristem maintenance
biological_process GO:0009873 ethylene-activated signaling pathway
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0042545 cell wall modification
biological_process GO:0007267 cell-cell signaling
biological_process GO:0008152 metabolic process
biological_process GO:0010337 regulation of salicylic acid metabolic process
biological_process GO:0010200 response to chitin
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0033587 shikimate biosynthetic process
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0009423 chorismate biosynthetic process
biological_process GO:0007165 signal transduction
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006364 rRNA processing
biological_process GO:0090342 regulation of cell aging
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0051205 protein insertion into membrane
biological_process GO:0045038 protein import into chloroplast thylakoid membrane
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0042793 plastid transcription
biological_process GO:0010207 photosystem II assembly
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0009902 chloroplast relocation
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0019521 D-gluconate metabolic process
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0015031 protein transport
biological_process GO:0006486 protein glycosylation
biological_process GO:0010014 meristem initiation
biological_process GO:0006425 glutaminyl-tRNA aminoacylation
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006096 glycolytic process
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0009553 embryo sac development
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009567 double fertilization forming a zygote and endosperm
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006457 protein folding
biological_process GO:0016120 carotene biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009765 photosynthesis, light harvesting
biological_process GO:0006396 RNA processing
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0016123 xanthophyll biosynthetic process
biological_process GO:0048868 pollen tube development
biological_process GO:0009651 response to salt stress
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0006084 acetyl-CoA metabolic process
biological_process GO:0009612 response to mechanical stimulus
biological_process GO:0010099 regulation of photomorphogenesis
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0008643 carbohydrate transport
biological_process GO:0019722 calcium-mediated signaling
biological_process GO:0005513 detection of calcium ion
biological_process GO:0055085 transmembrane transport
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0000159 protein phosphatase type 2A complex
cellular_component GO:0032580 Golgi cisterna membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0005768 endosome
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
cellular_component GO:0044424 intracellular part
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005730 nucleolus
cellular_component GO:0035145 exon-exon junction complex
cellular_component GO:0016604 nuclear body
cellular_component GO:0005737 cytoplasm
cellular_component GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:1901363 heterocyclic compound binding
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
molecular_function GO:0051287 NAD binding
molecular_function GO:0042802 identical protein binding
molecular_function GO:0004715 non-membrane spanning protein tyrosine kinase activity
molecular_function GO:0003856 3-dehydroquinate synthase activity
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0019888 protein phosphatase regulator activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0005488 binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0050661 NADP binding
molecular_function GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0045435 lycopene epsilon cyclase activity
molecular_function GO:0020037 heme binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0003756 protein disulfide isomerase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005351 carbohydrate:proton symporter activity
molecular_function GO:0004819 glutamine-tRNA ligase activity
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0097159 organic cyclic compound binding
RNA-Seq Expression