Spo20629 (gene)

Overview
NameSpo20629
Typegene
OrganismSpinacia oleracea (Spinach)
Description50S ribosomal protein L14, chloroplastic
Locationchr3 : 51647684 .. 51648049 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCAACCTCAGACCCATTTGAATGTAGCAGACAACAGCGGGGCTCGAGAATTGATGTGTATTCGAATCATAGGAGCTAGCAACCGTCGATATGCTCGTATTGGTGACGTTATTGTTGCTGTGATCAAAGAAGCAATCCCCAACACGCCCTTAGAAAGATCAGAAGTGATCAGAGCTGTAGTTGTACGTACTTGTAAAGAACTAAAACGCGACAACGGTATGATAATACGATATGATGACAATGCTGCAGTTATCATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCAATTGCCCGGGAATTGCGACAAAAATTTGCGAAAATAGTTTCATTAGCTCCTGAGGTATTATAA

mRNA sequence

ATGATTCAACCTCAGACCCATTTGAATGTAGCAGACAACAGCGGGGCTCGAGAATTGATGTGTATTCGAATCATAGGAGCTAGCAACCGTCGATATGCTCGTATTGGTGACGTTATTGTTGCTGTGATCAAAGAAGCAATCCCCAACACGCCCTTAGAAAGATCAGAAGTGATCAGAGCTGTAGTTGTACGTACTTGTAAAGAACTAAAACGCGACAACGGTATGATAATACGATATGATGACAATGCTGCAGTTATCATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCAATTGCCCGGGAATTGCGACAAAAATTTGCGAAAATAGTTTCATTAGCTCCTGAGGTATTATAA

Coding sequence (CDS)

ATGATTCAACCTCAGACCCATTTGAATGTAGCAGACAACAGCGGGGCTCGAGAATTGATGTGTATTCGAATCATAGGAGCTAGCAACCGTCGATATGCTCGTATTGGTGACGTTATTGTTGCTGTGATCAAAGAAGCAATCCCCAACACGCCCTTAGAAAGATCAGAAGTGATCAGAGCTGTAGTTGTACGTACTTGTAAAGAACTAAAACGCGACAACGGTATGATAATACGATATGATGACAATGCTGCAGTTATCATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCAATTGCCCGGGAATTGCGACAAAAATTTGCGAAAATAGTTTCATTAGCTCCTGAGGTATTATAA

Protein sequence

MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRAVVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPEVL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo20629.1Spo20629.1mRNA


Homology
[Close]
BLAST of Spo20629.1 vs. NCBI nr
Match: gi|11497563|ref|NP_054971.1| (ribosomal protein L14 [Spinacia oleracea])

HSP 1 Score: 235.7 bits (600), Expect = 4.200e-59
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPEV 120
           VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPEV
Sbjct: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPEV 120

Query: 121 L 122
           L
Sbjct: 121 L 121
[Close]
BLAST of Spo20629.1 vs. NCBI nr
Match: gi|910354353|ref|YP_009160839.1| (ribosomal protein L14 (chloroplast) [Haloxylon ammodendron])

HSP 1 Score: 232.3 bits (591), Expect = 4.600e-58
Identity = 118/121 (97.52%), Postives = 120/121 (99.17%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNR+YARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRQYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPEV 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKF KIVSLAPEV
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFTKIVSLAPEV 120

Query: 121 L 122
           L
Sbjct: 121 L 121
[Close]
BLAST of Spo20629.1 vs. NCBI nr
Match: gi|982898198|ref|YP_009221844.1| (ribosomal protein L14 (chloroplast) [Mesembryanthemum crystallinum])

HSP 1 Score: 231.5 bits (589), Expect = 7.900e-58
Identity = 117/121 (96.69%), Postives = 119/121 (98.35%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPEV 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTR+FGAIARELRQ F KIVSLAPEV
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRVFGAIARELRQNFTKIVSLAPEV 120

Query: 121 L 122
           L
Sbjct: 121 L 121
[Close]
BLAST of Spo20629.1 vs. NCBI nr
Match: gi|12312|emb|CAA31717.1| (ribosomal protein L14 [Spinacia oleracea])

HSP 1 Score: 231.1 bits (588), Expect = 1.000e-57
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAA-VIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           VVVRTCKELKRDNGMIIRYDDNAA VIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE
Sbjct: 61  VVVRTCKELKRDNGMIIRYDDNAAVVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120

Query: 121 VL 122
           VL
Sbjct: 121 VL 122
[Close]
BLAST of Spo20629.1 vs. NCBI nr
Match: gi|902181471|gb|KNA09754.1| (hypothetical protein SOVF_150420, partial [Spinacia oleracea])

HSP 1 Score: 230.7 bits (587), Expect = 1.300e-57
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARE MCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARESMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 120
           VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE
Sbjct: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPE 119
[Close]
BLAST of Spo20629.1 vs. UniProtKB/TrEMBL
Match: A0A0K0K8A5_9CARY (50S ribosomal protein L14, chloroplastic OS=Haloxylon ammodendron GN=rpl14 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.200e-58
Identity = 118/121 (97.52%), Postives = 120/121 (99.17%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNR+YARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRQYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPEV 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKF KIVSLAPEV
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFTKIVSLAPEV 120

Query: 121 L 122
           L
Sbjct: 121 L 121
[Close]
BLAST of Spo20629.1 vs. UniProtKB/TrEMBL
Match: A0A0K0K9G2_9CARY (50S ribosomal protein L14, chloroplastic OS=Haloxylon persicum GN=rpl14 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.200e-58
Identity = 118/121 (97.52%), Postives = 120/121 (99.17%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNR+YARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRQYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPEV 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKF KIVSLAPEV
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFTKIVSLAPEV 120

Query: 121 L 122
           L
Sbjct: 121 L 121
[Close]
BLAST of Spo20629.1 vs. UniProtKB/TrEMBL
Match: H2BC32_9CARY (50S ribosomal protein L14, chloroplastic (Fragment) OS=Didierea madagascariensis GN=rpl14 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 5.500e-58
Identity = 117/121 (96.69%), Postives = 119/121 (98.35%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPEV 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTR+FGAIARELRQ F KIVSLAPEV
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRVFGAIARELRQNFTKIVSLAPEV 120

Query: 121 L 122
           L
Sbjct: 121 L 121
[Close]
BLAST of Spo20629.1 vs. UniProtKB/TrEMBL
Match: H2BC38_POROL (50S ribosomal protein L14, chloroplastic (Fragment) OS=Portulaca oleracea GN=rpl14 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 5.500e-58
Identity = 117/121 (96.69%), Postives = 119/121 (98.35%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPEV 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTR+FGAIARELRQ F KIVSLAPEV
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRVFGAIARELRQNFTKIVSLAPEV 120

Query: 121 L 122
           L
Sbjct: 121 L 121
[Close]
BLAST of Spo20629.1 vs. UniProtKB/TrEMBL
Match: A0A0G2R7W9_MESCR (50S ribosomal protein L14, chloroplastic OS=Mesembryanthemum crystallinum GN=rpl14 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 5.500e-58
Identity = 117/121 (96.69%), Postives = 119/121 (98.35%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPEV 120
           V+VRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTR+FGAIARELRQ F KIVSLAPEV
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRVFGAIARELRQNFTKIVSLAPEV 120

Query: 121 L 122
           L
Sbjct: 121 L 121
[Close]
BLAST of Spo20629.1 vs. ExPASy Swiss-Prot
Match: RK14_SPIOL (50S ribosomal protein L14, chloroplastic OS=Spinacia oleracea GN=rpl14 PE=1 SV=2)

HSP 1 Score: 235.7 bits (600), Expect = 2.600e-61
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPEV 120
           VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPEV
Sbjct: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPEV 120

Query: 121 L 122
           L
Sbjct: 121 L 121
[Close]
BLAST of Spo20629.1 vs. ExPASy Swiss-Prot
Match: RK14_EUCGG (50S ribosomal protein L14, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rpl14 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 3.900e-57
Identity = 112/122 (91.80%), Postives = 118/122 (96.72%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQ+HLNVADNSGARELMCIRIIGASNRRYA IGD+IVAVIKEA+PNTPLERSEVIRA
Sbjct: 1   MIQPQSHLNVADNSGARELMCIRIIGASNRRYAHIGDIIVAVIKEALPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAV+IDQEGNPKGTR+FGAIARELRQ  F KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRQLNFTKIVSLAPE 120

Query: 121 VL 122
           VL
Sbjct: 121 VL 122
[Close]
BLAST of Spo20629.1 vs. ExPASy Swiss-Prot
Match: RK14_COFAR (50S ribosomal protein L14, chloroplastic OS=Coffea arabica GN=rpl14 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 3.900e-57
Identity = 113/122 (92.62%), Postives = 117/122 (95.90%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNRRYA IGDVIVAVIKEA+PN PLERSEV+RA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAVPNMPLERSEVVRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAV+IDQEGNPKGTRIFGAIARELRQ  F KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELRQLNFTKIVSLAPE 120

Query: 121 VL 122
           VL
Sbjct: 121 VL 122
[Close]
BLAST of Spo20629.1 vs. ExPASy Swiss-Prot
Match: RK14_PLAOC (50S ribosomal protein L14, chloroplastic OS=Platanus occidentalis GN=rpl14 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 3.900e-57
Identity = 113/122 (92.62%), Postives = 117/122 (95.90%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNRRYA IGDVIVAVIKEA+PN PLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAVPNMPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKELKRDNGMIIRYDDNAAV+IDQEGNPKGTR+FGAIARELRQ  F KIVSLAPE
Sbjct: 61  VIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRQLSFTKIVSLAPE 120

Query: 121 VL 122
           VL
Sbjct: 121 VL 122
[Close]
BLAST of Spo20629.1 vs. ExPASy Swiss-Prot
Match: RK14_CITSI (50S ribosomal protein L14, chloroplastic OS=Citrus sinensis GN=rpl14 PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 6.600e-57
Identity = 112/122 (91.80%), Postives = 117/122 (95.90%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQTHLNVADNSGARELMCIRIIGASNRRYA IGDVIVAVIKEA+PNTPLERSEVIRA
Sbjct: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAVPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKEL+RDNGMIIRYDDNAAV+ID EGNPKGTR+FGAIARELRQ  F KIVSLAPE
Sbjct: 61  VIVRTCKELRRDNGMIIRYDDNAAVVIDHEGNPKGTRVFGAIARELRQLNFTKIVSLAPE 120

Query: 121 VL 122
           VL
Sbjct: 121 VL 122
[Close]
BLAST of Spo20629.1 vs. TAIR (Arabidopsis)
Match: ATCG00780.1 (ribosomal protein L14)

HSP 1 Score: 216.1 bits (549), Expect = 1.200e-56
Identity = 111/122 (90.98%), Postives = 116/122 (95.08%), Query Frame = 1 

		  

Query: 1   MIQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRA 60
           MIQPQT+LNVADNSGARELMCIRIIGASNRRYA IGDVIVAVIKEAIPNTPLERSEVIRA
Sbjct: 1   MIQPQTYLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLERSEVIRA 60

Query: 61  VVVRTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQ-KFAKIVSLAPE 120
           V+VRTCKELKR+NG IIRYDDNAAV+IDQEGNPKGTR+FGAI RELRQ  F KIVSLAPE
Sbjct: 61  VIVRTCKELKRNNGTIIRYDDNAAVVIDQEGNPKGTRVFGAIPRELRQLNFTKIVSLAPE 120

Query: 121 VL 122
           VL
Sbjct: 121 VL 122
[Close]
BLAST of Spo20629.1 vs. TAIR (Arabidopsis)
Match: AT5G46160.1 (Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 95.1 bits (235), Expect = 3.100e-20
Identity = 54/127 (42.52%), Postives = 80/127 (62.99%), Query Frame = 1 

		  

Query: 2   IQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVIKEAIPNTPLERSEVIRAV 61
           IQ  T L V DNSGA+++MCI+ +    ++ AR+GD IVA +KEA+PN  +++  V+  V
Sbjct: 48  IQMGTVLKVVDNSGAKKVMCIQAL--KGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGV 107

Query: 62  VVRTCKELKRDNGMIIRYDDNAAVIIDQ-------EGNPKGTRIFGAIARELR-QKFAKI 121
           VVR   +  R +G  +R+DDNA V++D        +  P GTR+FG +  ELR +K  KI
Sbjct: 108 VVRAAMQRGRVDGSEVRFDDNAVVLVDSKDKNTKTDRQPIGTRVFGPVPHELRKKKHLKI 167
[Close]
BLAST of Spo20629.1 vs. TAIR (Arabidopsis)
Match: AT1G17560.1 (Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 70.5 bits (171), Expect = 8.200e-13
Identity = 48/150 (32.00%), Postives = 76/150 (50.67%), Query Frame = 1 

		  

Query: 2   IQPQTHLNVADNSGARELMCIRIIGASNRRYARIGDVIVAVI------------KEAIPN 61
           IQ  T L   DNS A+E+MCI+ +    ++ AR+GD+IV  +            K+AIP 
Sbjct: 49  IQMGTILKCVDNSCAKEVMCIQSL--RGKKGARLGDIIVGSVKEANPIVQKKVKKDAIPK 108

Query: 62  TPLERSEVIRAVVVRTCKELKRDNGMIIRYDDNAAVIID-----------------QEGN 121
             +++  V+  VVVR      R +G  +++DDNA V++                  +   
Sbjct: 109 GKVKKGMVVYGVVVRAAMPKGRADGSQVKFDDNAIVVVGIKEKKGQNNSHGSKRKMEYNQ 168
[Close]
BLAST of Spo20629.1 vs. TAIR (Arabidopsis)
Match: AT1G04480.1 (Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 70.1 bits (170), Expect = 1.100e-12
Identity = 40/118 (33.90%), Postives = 69/118 (58.47%), Query Frame = 1 

		  

Query: 8   LNVADNSGARELMCIRIIGASNRRY----ARIGDVIVAVIKEAIPNTPLERSEVIRAVVV 67
           +N ADN+GA+ L  I + G   R      A +GD+++A +K+  P+    R +V+ AV+V
Sbjct: 26  VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVLPAVIV 85

Query: 68  RTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPEVL 122
           R  K  +R +G+ + ++DNA VI++ +G  KG+ I G I +E    + +I S A  ++
Sbjct: 86  RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 140
[Close]
BLAST of Spo20629.1 vs. TAIR (Arabidopsis)
Match: AT2G33370.1 (Ribosomal protein L14p/L23e family protein)

HSP 1 Score: 70.1 bits (170), Expect = 1.100e-12
Identity = 40/118 (33.90%), Postives = 69/118 (58.47%), Query Frame = 1 

		  

Query: 8   LNVADNSGARELMCIRIIGASNRRY----ARIGDVIVAVIKEAIPNTPLERSEVIRAVVV 67
           +N ADN+GA+ L  I + G   R      A +GD+++A +K+  P+    R +V+ AV+V
Sbjct: 26  VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVLPAVIV 85

Query: 68  RTCKELKRDNGMIIRYDDNAAVIIDQEGNPKGTRIFGAIARELRQKFAKIVSLAPEVL 122
           R  K  +R +G+ + ++DNA VI++ +G  KG+ I G I +E    + +I S A  ++
Sbjct: 86  RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 140
The following BLAST results are available for this feature:
BLAST of Spo20629.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|11497563|ref|NP_054971.1|4.2e-59100.ribosomal protein L14 [Spinaci... [more]
gi|910354353|ref|YP_009160839.1|4.6e-5897.5ribosomal protein L14 (chlorop... [more]
gi|982898198|ref|YP_009221844.1|7.9e-5896.6ribosomal protein L14 (chlorop... [more]
gi|12312|emb|CAA31717.1|1.0e-5799.1ribosomal protein L14 [Spinaci... [more]
gi|902181471|gb|KNA09754.1|1.3e-5799.1hypothetical protein SOVF_1504... [more]
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BLAST of Spo20629.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K0K8A5_9CARY3.2e-5897.550S ribosomal protein L14, chl... [more]
A0A0K0K9G2_9CARY3.2e-5897.550S ribosomal protein L14, chl... [more]
H2BC32_9CARY5.5e-5896.650S ribosomal protein L14, chl... [more]
H2BC38_POROL5.5e-5896.650S ribosomal protein L14, chl... [more]
A0A0G2R7W9_MESCR5.5e-5896.650S ribosomal protein L14, chl... [more]
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BLAST of Spo20629.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RK14_SPIOL2.6e-61100.50S ribosomal protein L14, chl... [more]
RK14_EUCGG3.9e-5791.850S ribosomal protein L14, chl... [more]
RK14_COFAR3.9e-5792.650S ribosomal protein L14, chl... [more]
RK14_PLAOC3.9e-5792.650S ribosomal protein L14, chl... [more]
RK14_CITSI6.6e-5791.850S ribosomal protein L14, chl... [more]
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BLAST of Spo20629.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
ATCG00780.11.2e-5690.9ribosomal protein L14[more]
AT5G46160.13.1e-2042.5Ribosomal protein L14p/L23e fa... [more]
AT1G17560.18.2e-1332.0Ribosomal protein L14p/L23e fa... [more]
AT1G04480.11.1e-1233.9Ribosomal protein L14p/L23e fa... [more]
AT2G33370.11.1e-1233.9Ribosomal protein L14p/L23e fa... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000218Ribosomal protein L14PGENE3D2.40.150.20coord: 1..121
score: 1.4
IPR000218Ribosomal protein L14PHAMAPMF_01367Ribosomal_L14coord: 1..121
score: 25
IPR000218Ribosomal protein L14PPANTHERPTHR1176150S/60S RIBOSOMAL PROTEIN L14/L23coord: 1..121
score: 2.5
IPR000218Ribosomal protein L14PPFAMPF00238Ribosomal_L14coord: 1..121
score: 4.3
IPR000218Ribosomal protein L14PSMARTSM01374Ribosomal_L14_2coord: 1..121
score: 3.9
IPR000218Ribosomal protein L14PunknownSSF50193Ribosomal protein L14coord: 1..121
score: 1.83
IPR005745Ribosomal protein L14P, bacterial-typeTIGRFAMsTIGR01067TIGR01067coord: 1..121
score: 2.2
IPR019972Ribosomal protein L14P, conserved sitePROSITEPS00049RIBOSOMAL_L14coord: 60..86
scor

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006352 DNA-templated transcription, initiation
biological_process GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process GO:0032502 developmental process
biological_process GO:0006412 translation
biological_process GO:0009987 cellular process
biological_process GO:1901575 organic substance catabolic process
biological_process GO:0016070 RNA metabolic process
biological_process GO:0009736 cytokinin-activated signaling pathway
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0000186 activation of MAPKK activity
biological_process GO:0010104 regulation of ethylene-activated signaling pathway
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0006366 transcription by RNA polymerase II
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008152 metabolic process
biological_process GO:0006396 RNA processing
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0044248 cellular catabolic process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0006334 nucleosome assembly
biological_process GO:0006448 regulation of translational elongation
cellular_component GO:0030127 COPII vesicle coat
cellular_component GO:0005840 ribosome
cellular_component GO:0009507 chloroplast
cellular_component GO:0005622 intracellular
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0000785 chromatin
cellular_component GO:0005669 transcription factor TFIID complex
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005634 nucleus
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005739 mitochondrion
cellular_component GO:0000786 nucleosome
molecular_function GO:0003677 DNA binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004709 MAP kinase kinase kinase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003712 transcription coregulator activity
molecular_function GO:0004386 helicase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0005525 GTP binding
RNA-Seq Expression