Spo20638 (gene)

Overview
NameSpo20638
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionHistone H3
Locationchr3 : 51667674 .. 51671462 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAAAGAGGAAAGAGAAGAAGGGAGATGAAGGACCTACAGTAATTTCATTTGGCGCTCTTCAGGATGGCGCAAATTGGACAAATAAATCCGGCCCAATTCTCATCAGTTGTCGCAATTTGTGAAAATACATCCCGCCCAAAATCCAGTTTTTCATTTGTGTTTTCCCTCCCCTTTTTTAGTGGGATTGATGAGTTGTCAACATATTATAGGTGGTGTACAAGATGCTCTTGTACACTAGGTGTATATGTAGCATTTTCCTGACGTTTATGTTAAAATTCTGAAGTGGCTAAATGACGCTTATTGTTTCAGGCGTCTTGTGTAAATGAACTCAAATGATTCTTATTGGAATCCATTAATTTGGTATTGACATATTCTGTGTGAGTACTAAAATTTGTTGTGTTTTGGCCATTGGGGTGACTTGTAGGTTTGCCCAATTGGTTACATATCACTTGACGTTCAATGAACACTGTGCTTTTTTTTTTTCTTTTTCTTTTTGTAGTTTTGCACACCCTATTCACCGATTTTAGCTTCGACTACATTCGGATCCGCCCCGGGTCGCACACCTTGTTTATGGTGGGTGAGTCTCCCAGTAAGAGTTTCTGCATACGGCGAGGCTTGAACCCGATACCTCCCTTAAGCGGCATCAAGCTGCTTACCACTTGAGCCAACTATATGTTGGTATTGTGCTTTTACATCATTGCTAGTGTTGGTACTTGGTAGCACATTACACGGGATTGGGCATGGCCTGATTTGATTGTGTAATTTTCTCAATTTGCGAAACACTACCCTATTGAATGCACAGTTAAATTCCAAACTTATACAGTCTATGTTATTAAATATACAGTCAACAAGTCGGGTAGAAGTTTTCGGTATTGTTCTATCACGCTAAAGTGTTGGTCGACCAAAAACCTTAGGGGCATGTTTGGTTGCAAGTAAATAAAGGAGGAGGTGTGAGTTCATATGAAGTGCAATATGTTAAGTTGTTTGGTTGGCATGAATTGAGATTTGGGTATAATGGAGGAATTGTTAAAATTTCATGGAACATGGGAAATGACTTACCTACCATCGACTTGGTGAGTCAATTCTCATATCAATTCCCAATACGACAAAATGCCAAAGTTCAACCAAACGAGCCATACCAATGGAAAAAAATGTTCCAAAAAAACCATGTGTGCAGTATTTTGGACTTCAAATTTTATGAACTGAACTAAACTTGACTTATTGAGTCTGGATTTAACTTATAAAACGTGAACTAAACTAAAATGAACTAAACTTATAAAAAATTTCAAAGAACAAGGCCGAATTCTCGTTCTATGGATTCGCAATTTTTTTTTTGCCTAACTTAAAACTTAATGATAATAGTTAACTGGCCAATTGAAATTCCAAGTTTTGAATTTGTTAGACAATTTTATTTCGGAGTACCATGATTAGCAAAACAATCGATGGAATAGTAAGTATGTCTCTTATGAGATCATCATATGTGTAAAATCGACATCGCGATGTGTGCATTTAAAAACATAACTATTTAACTGGAAAGTACAACTATTTGATTAACAATTGTATCTATTTAATTAGAGAGTATATAAATAATACTCTGTGTAATTATTTGATAAGAAATTGGTCTTATATATAAAATCGTCTTTACGTACCGAGTAGGAAAGTTTTACTAGAAATATGGGCAATTTAGGCATACCATACAAGGGTATAACCGTCACTTCCAAGGACAATCAATATTGTGCACCCAACAAAAACAAAAAAAAAGTTGAAAAAACCCTAAAACGTGTTAGTTAGAATTCGTCAACCAACAAGTAAACCCCATCAATCCGTAACAAAACCAAGCATTACATCTTAGCCGTTCACTGTAATAGAGAAAACACAACCAACGTTATTTTACACCGTTAGATCTCCAACAGTAAAAGCACACGGATCGTCATTATCAGCCGTCGATTCCCTCATCATTTGTTAACCCGCCCACCCATCTTATATAAACCACTTCACCTCCTTCAATTACAAATTTCTGCTAATCGTCTTCAAATTCTACAGAGAGAAAAAGAGAGGAGAGAGAAAGAGAGAACCGACTTTTCGAAAAAGCGTAAGGAGTTTTGTCGAGGTAACCTTCTTCTTCTTCCGATCTCTTCAATTTCCTTTTTGATTTTTTTGACGCTTTGTATTCTTTGATTTTAAGGTTAGCTTTCCGTAGTTTATGAATCTGTTTGTTTGATGATTCCGTTAATGTTTGAAATTTATTGCTCTTTTGTTGAATGAATTTGTGGCGGACATCGAAATTAAGGTTTTCATTGATTCTTGTTGTTAATTTTACTAGGTTAAATTACCTTATTCATAATTTCTACAGCGCTTTTCTATTTATTGTATTATTTGACTTTTATTAGGTTAGCTTTCGTAGTTTTTGAATCTGATTGTTTCATGATTTCGTCTATGTTGGAAATTTATTGCTGTTTGTTGAGTGAATTTGTCGCCGACGTCAAAATTAGGGTTTTAATTGATTTTATAGAATGCAGTTGAAAATATCTTAAACAATTTCGTCTGTGGTTTAGCTGGATCTTTGAAAATTGTTAACTTCCCCTAAACGTTTTCCTGATTAATTCGGGAAGTGATTTTTTGAATTTTCCCCCAAAATTGATGTGGATTTAATCCAAATTAGTAATTTAGTATTTATCTTGAAGTTGTTTAGGGTTTTAGTTTGATATTATATCTAATCGTGGATTTATGTTTCTTATAGATGGCCCGTACCAAGCAAACTGCTCGTAAAAGTACGGGAGGAAAGGCTCCCAGGAAGCAACTTGCCACCAAGGTATTAATCTTATCCTCGCATTGTTCTTTTGATTGTGAATTGTTCTTGAACATTGCTATCTGTATTTCGAAGCTTGTATTGTTCTTGAATGTTGCTATCTGTATTTTGAAGCTTGTATAATTCTTGAATGTTGGTGTTTGTATAGTTCTTGAATCTTGGCGCTTTTGTATTGTTCTTATAGGCTGCTCGTAAGTCTGCCCCAACTACCGGAGGAGTGAAGAAGCCTCACCGTTACCGTCCCGGAACCGTTGCACTCCGTGAAATCAGGAAGTACCAGAAGAGCACAGAGCTGTTGATCAGGAAGCTGCCATTCCAGAGGCTTGTCCGTGAAATTGCACAAGACTTCAAGACTGATCTCCGTTTCCAGAGCCACGCTGTTTTGGCCCTTCAGGAGGCTGCTGAGGCTTACCTTGTTGGTCTGTTCGAGGACACCAACCTGTGCGCCATCCACGCCAAGCGTGTTACCATCATGCCTAAGGACATCCAGCTTGCTCGCAGGATCAGGGGTGAACGTGCTTAATCGGGTTAAGCTCCTCCTCGGTTGGTTTGTTTGTTTTTGCTATAATAGTATTAGTTGATGTTATTGTTTAGGCTTAATGCAGGACTTAAATAGGGTTTGTTATTGTTGGGGATGATGGGGTTTGATGATGAATGCTGTATTCGTAGTGAAAAGTAATGATGGTGGTGTTTTGAGAGCAAAGGAACTCAAGTTTCTGGTATATTTGGTGCAAGTATTTTGATTTCTGTTATGTGGTCTCACACTGATTGTGTGTGGAAACACTCATCTAATGTAGTTCATATATATGAGACTTAATTCGTTTATGTTCATTCTTGATTGAGTTCCTTGGCTACATTAATTGATCTAATTTCAGCTCCTCGGTTGTTTGTTTTTTTGTTTTTGCTATAATTGTATTAGTTTGATGTTATTGTTAGGGTTAATTGCAGGACTTGAAATAGATGTTGTTATTGTT

mRNA sequence

ATGGCAGAAAGAGGAAAGAGAAGAAGGGAGATGAAGGACCTACAAGAGAAAAAGAGAGGAGAGAGAAAGAGAGAACCGACTTTTCGAAAAAGCGTAAGGAGTTTTGTCGAGATGGCCCGTACCAAGCAAACTGCTCGTAAAAGTACGGGAGGAAAGGCTCCCAGGAAGCAACTTGCCACCAAGGCTGCTCGTAAGTCTGCCCCAACTACCGGAGGAGTGAAGAAGCCTCACCGTTACCGTCCCGGAACCGTTGCACTCCGTGAAATCAGGAAGTACCAGAAGAGCACAGAGCTGTTGATCAGGAAGCTGCCATTCCAGAGGCTTGTCCGTGAAATTGCACAAGACTTCAAGACTGATCTCCGTTTCCAGAGCCACGCTGTTTTGGCCCTTCAGGAGGCTGCTGAGGCTTACCTTGTTGGTCTGTTCGAGGACACCAACCTGTGCGCCATCCACGCCAAGCGTGTTACCATCATGCCTAAGGACATCCAGCTTGCTCGCAGGATCAGGGGTGAACGTGCTTAATCGGGTTAAGCTCCTCCTCGGTTGGTTTGTTTGTTTTTGCTATAATAGTATTAGTTGATGTTATTGTTTAGGCTTAATGCAGGACTTAAATAGGGTTTGTTATTGTTGGGGATGATGGGGTTTGATGATGAATGCTGTATTCGTAGTGAAAAGTAATGATGGTGGTGTTTTGAGAGCAAAGGAACTCAAGTTTCTGGTATATTTGGTGCAAGTATTTTGATTTCTGTTATGTGGTCTCACACTGATTGTGTGTGGAAACACTCATCTAATGTAGTTCATATATATGAGACTTAATTCGTTTATGTTCATTCTTGATTGAGTTCCTTGGCTACATTAATTGATCTAATTTCAGCTCCTCGGTTGTTTGTTTTTTTGTTTTTGCTATAATTGTATTAGTTTGATGTTATTGTTAGGGTTAATTGCAGGACTTGAAATAGATGTTGTTATTGTT

Coding sequence (CDS)

ATGGCAGAAAGAGGAAAGAGAAGAAGGGAGATGAAGGACCTACAAGAGAAAAAGAGAGGAGAGAGAAAGAGAGAACCGACTTTTCGAAAAAGCGTAAGGAGTTTTGTCGAGATGGCCCGTACCAAGCAAACTGCTCGTAAAAGTACGGGAGGAAAGGCTCCCAGGAAGCAACTTGCCACCAAGGCTGCTCGTAAGTCTGCCCCAACTACCGGAGGAGTGAAGAAGCCTCACCGTTACCGTCCCGGAACCGTTGCACTCCGTGAAATCAGGAAGTACCAGAAGAGCACAGAGCTGTTGATCAGGAAGCTGCCATTCCAGAGGCTTGTCCGTGAAATTGCACAAGACTTCAAGACTGATCTCCGTTTCCAGAGCCACGCTGTTTTGGCCCTTCAGGAGGCTGCTGAGGCTTACCTTGTTGGTCTGTTCGAGGACACCAACCTGTGCGCCATCCACGCCAAGCGTGTTACCATCATGCCTAAGGACATCCAGCTTGCTCGCAGGATCAGGGGTGAACGTGCTTAA

Protein sequence

MAERGKRRREMKDLQEKKRGERKREPTFRKSVRSFVEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo20638.1Spo20638.1mRNA


Homology
[Close]
BLAST of Spo20638.1 vs. NCBI nr
Match: gi|571542288|ref|XP_003552025.2| (PREDICTED: histone H3.3 [Glycine max])

HSP 1 Score: 263.1 bits (671), Expect = 3.500e-67
Identity = 140/146 (95.89%), Postives = 141/146 (96.58%), Query Frame = 1 

		  

Query: 28  FRKSVRSFVEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR 87
           FRK    + EMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR
Sbjct: 41  FRKQRPKYFEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR 100

Query: 88  EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 147
           EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL
Sbjct: 101 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 160

Query: 148 CAIHAKRVTIMPKDIQLARRIRGERA 174
           CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 161 CAIHAKRVTIMPKDIQLARRIRGERA 186
[Close]
BLAST of Spo20638.1 vs. NCBI nr
Match: gi|734400320|gb|KHN31394.1| (Histone H3.3 [Glycine soja])

HSP 1 Score: 263.1 bits (671), Expect = 3.500e-67
Identity = 140/146 (95.89%), Postives = 141/146 (96.58%), Query Frame = 1 

		  

Query: 28  FRKSVRSFVEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR 87
           FRK    + EMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR
Sbjct: 41  FRKQRPKYFEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR 100

Query: 88  EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 147
           EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL
Sbjct: 101 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 160

Query: 148 CAIHAKRVTIMPKDIQLARRIRGERA 174
           CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 161 CAIHAKRVTIMPKDIQLARRIRGERA 186
[Close]
BLAST of Spo20638.1 vs. NCBI nr
Match: gi|763749932|gb|KJB17320.1| (hypothetical protein B456_003G041300 [Gossypium raimondii])

HSP 1 Score: 261.9 bits (668), Expect = 7.800e-67
Identity = 138/142 (97.18%), Postives = 139/142 (97.89%), Query Frame = 1 

		  

Query: 32  VRSFVEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRK 91
           +  F EMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRK
Sbjct: 12  IHIFAEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRK 71

Query: 92  YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 151
           YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH
Sbjct: 72  YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 131

Query: 152 AKRVTIMPKDIQLARRIRGERA 174
           AKRVTIMPKDIQLARRIRGERA
Sbjct: 132 AKRVTIMPKDIQLARRIRGERA 153
[Close]
BLAST of Spo20638.1 vs. NCBI nr
Match: gi|937921062|dbj|BAS95979.1| (Os06g0130900, partial [Oryza sativa Japonica Group])

HSP 1 Score: 260.4 bits (664), Expect = 2.300e-66
Identity = 139/141 (98.58%), Postives = 139/141 (98.58%), Query Frame = 1 

		  

Query: 33  RSFVEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKY 92
           RS  EMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKY
Sbjct: 29  RSEEEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKY 88

Query: 93  QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHA 152
           QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHA
Sbjct: 89  QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHA 148

Query: 153 KRVTIMPKDIQLARRIRGERA 174
           KRVTIMPKDIQLARRIRGERA
Sbjct: 149 KRVTIMPKDIQLARRIRGERA 169
[Close]
BLAST of Spo20638.1 vs. NCBI nr
Match: gi|944265898|gb|KQL30138.1| (hypothetical protein SETIT_018284mg [Setaria italica])

HSP 1 Score: 258.8 bits (660), Expect = 6.600e-66
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1 

		  

Query: 37  EMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST 96
           EMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST
Sbjct: 88  EMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST 147

Query: 97  ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 156
           ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT
Sbjct: 148 ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 207

Query: 157 IMPKDIQLARRIRGERA 174
           IMPKDIQLARRIRGERA
Sbjct: 208 IMPKDIQLARRIRGERA 224
[Close]
BLAST of Spo20638.1 vs. UniProtKB/TrEMBL
Match: A0A0B2RGD5_GLYSO (Histone H3.3 OS=Glycine soja GN=glysoja_023048 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.400e-67
Identity = 140/146 (95.89%), Postives = 141/146 (96.58%), Query Frame = 1 

		  

Query: 28  FRKSVRSFVEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR 87
           FRK    + EMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR
Sbjct: 41  FRKQRPKYFEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR 100

Query: 88  EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 147
           EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL
Sbjct: 101 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 160

Query: 148 CAIHAKRVTIMPKDIQLARRIRGERA 174
           CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 161 CAIHAKRVTIMPKDIQLARRIRGERA 186
[Close]
BLAST of Spo20638.1 vs. UniProtKB/TrEMBL
Match: K7MPE3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G015200 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.400e-67
Identity = 140/146 (95.89%), Postives = 141/146 (96.58%), Query Frame = 1 

		  

Query: 28  FRKSVRSFVEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR 87
           FRK    + EMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR
Sbjct: 41  FRKQRPKYFEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR 100

Query: 88  EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 147
           EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL
Sbjct: 101 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 160

Query: 148 CAIHAKRVTIMPKDIQLARRIRGERA 174
           CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 161 CAIHAKRVTIMPKDIQLARRIRGERA 186
[Close]
BLAST of Spo20638.1 vs. UniProtKB/TrEMBL
Match: A0A0D2RDR1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G041300 PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 5.400e-67
Identity = 138/142 (97.18%), Postives = 139/142 (97.89%), Query Frame = 1 

		  

Query: 32  VRSFVEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRK 91
           +  F EMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRK
Sbjct: 12  IHIFAEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRK 71

Query: 92  YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 151
           YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH
Sbjct: 72  YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 131

Query: 152 AKRVTIMPKDIQLARRIRGERA 174
           AKRVTIMPKDIQLARRIRGERA
Sbjct: 132 AKRVTIMPKDIQLARRIRGERA 153
[Close]
BLAST of Spo20638.1 vs. UniProtKB/TrEMBL
Match: A0A0P0WRT9_ORYSJ (Os06g0130900 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os06g0130900 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.600e-66
Identity = 139/141 (98.58%), Postives = 139/141 (98.58%), Query Frame = 1 

		  

Query: 33  RSFVEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKY 92
           RS  EMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKY
Sbjct: 29  RSEEEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKY 88

Query: 93  QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHA 152
           QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHA
Sbjct: 89  QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHA 148

Query: 153 KRVTIMPKDIQLARRIRGERA 174
           KRVTIMPKDIQLARRIRGERA
Sbjct: 149 KRVTIMPKDIQLARRIRGERA 169
[Close]
BLAST of Spo20638.1 vs. UniProtKB/TrEMBL
Match: V7CZU0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G253800g PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 4.600e-66
Identity = 138/146 (94.52%), Postives = 141/146 (96.58%), Query Frame = 1 

		  

Query: 28  FRKSVRSFVEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR 87
           F  S+ +  +MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR
Sbjct: 57  FLMSLLALEQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALR 116

Query: 88  EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 147
           EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL
Sbjct: 117 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 176

Query: 148 CAIHAKRVTIMPKDIQLARRIRGERA 174
           CAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 177 CAIHAKRVTIMPKDIQLARRIRGERA 202
[Close]
BLAST of Spo20638.1 vs. ExPASy Swiss-Prot
Match: H33_TOBAC (Histone H3.3 OS=Nicotiana tabacum GN=H3 PE=1 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.600e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

		  

Query: 38  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 97
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 98  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 157
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 158 MPKDIQLARRIRGERA 174
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
[Close]
BLAST of Spo20638.1 vs. ExPASy Swiss-Prot
Match: H33_ORYSI (Histone H3.3 OS=Oryza sativa subsp. indica GN=OsI_011536 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.600e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

		  

Query: 38  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 97
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 98  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 157
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 158 MPKDIQLARRIRGERA 174
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
[Close]
BLAST of Spo20638.1 vs. ExPASy Swiss-Prot
Match: H33_ORYCO (Histone H3.3 OS=Oryza coarctata PE=2 SV=3)

HSP 1 Score: 256.9 bits (655), Expect = 1.600e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

		  

Query: 38  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 97
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 98  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 157
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 158 MPKDIQLARRIRGERA 174
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
[Close]
BLAST of Spo20638.1 vs. ExPASy Swiss-Prot
Match: H33_MEDSA (Histone H3.3 OS=Medicago sativa PE=1 SV=2)

HSP 1 Score: 256.9 bits (655), Expect = 1.600e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

		  

Query: 38  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 97
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 98  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 157
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 158 MPKDIQLARRIRGERA 174
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
[Close]
BLAST of Spo20638.1 vs. ExPASy Swiss-Prot
Match: H33_LOLTE (Histone H3.3 OS=Lolium temulentum PE=2 SV=2)

HSP 1 Score: 256.9 bits (655), Expect = 1.600e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

		  

Query: 38  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 97
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 98  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 157
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 158 MPKDIQLARRIRGERA 174
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
[Close]
BLAST of Spo20638.1 vs. TAIR (Arabidopsis)
Match: AT4G40030.2 (Histone superfamily protein)

HSP 1 Score: 258.5 bits (659), Expect = 3.000e-69
Identity = 136/138 (98.55%), Postives = 138/138 (100.00%), Query Frame = 1 

		  

Query: 36  VEMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 95
           ++MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS
Sbjct: 27  IKMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 86

Query: 96  TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 155
           TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV
Sbjct: 87  TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 146

Query: 156 TIMPKDIQLARRIRGERA 174
           TIMPKDIQLARRIRGERA
Sbjct: 147 TIMPKDIQLARRIRGERA 164
[Close]
BLAST of Spo20638.1 vs. TAIR (Arabidopsis)
Match: AT4G40040.1 (Histone superfamily protein)

HSP 1 Score: 256.9 bits (655), Expect = 8.800e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

		  

Query: 38  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 97
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 98  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 157
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 158 MPKDIQLARRIRGERA 174
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
[Close]
BLAST of Spo20638.1 vs. TAIR (Arabidopsis)
Match: AT5G10980.1 (Histone superfamily protein)

HSP 1 Score: 256.9 bits (655), Expect = 8.800e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1 

		  

Query: 38  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 97
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 98  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 157
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 158 MPKDIQLARRIRGERA 174
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
[Close]
BLAST of Spo20638.1 vs. TAIR (Arabidopsis)
Match: AT1G09200.1 (Histone superfamily protein)

HSP 1 Score: 248.1 bits (632), Expect = 4.100e-66
Identity = 132/136 (97.06%), Postives = 133/136 (97.79%), Query Frame = 1 

		  

Query: 38  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 97
           MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 98  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 157
           LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 158 MPKDIQLARRIRGERA 174
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
[Close]
BLAST of Spo20638.1 vs. TAIR (Arabidopsis)
Match: AT3G27360.1 (Histone superfamily protein)

HSP 1 Score: 248.1 bits (632), Expect = 4.100e-66
Identity = 132/136 (97.06%), Postives = 133/136 (97.79%), Query Frame = 1 

		  

Query: 38  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 97
           MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 98  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 157
           LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 158 MPKDIQLARRIRGERA 174
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136
The following BLAST results are available for this feature:
BLAST of Spo20638.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|571542288|ref|XP_003552025.2|3.5e-6795.8PREDICTED: histone H3.3 [Glyci... [more]
gi|734400320|gb|KHN31394.1|3.5e-6795.8Histone H3.3 [Glycine soja][more]
gi|763749932|gb|KJB17320.1|7.8e-6797.1hypothetical protein B456_003G... [more]
gi|937921062|dbj|BAS95979.1|2.3e-6698.5Os06g0130900, partial [Oryza s... [more]
gi|944265898|gb|KQL30138.1|6.6e-66100.hypothetical protein SETIT_018... [more]
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BLAST of Spo20638.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0B2RGD5_GLYSO2.4e-6795.8Histone H3.3 OS=Glycine soja G... [more]
K7MPE3_SOYBN2.4e-6795.8Uncharacterized protein OS=Gly... [more]
A0A0D2RDR1_GOSRA5.4e-6797.1Uncharacterized protein OS=Gos... [more]
A0A0P0WRT9_ORYSJ1.6e-6698.5Os06g0130900 protein (Fragment... [more]
V7CZU0_PHAVU4.6e-6694.5Uncharacterized protein OS=Pha... [more]
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BLAST of Spo20638.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
H33_TOBAC1.6e-67100.Histone H3.3 OS=Nicotiana taba... [more]
H33_ORYSI1.6e-67100.Histone H3.3 OS=Oryza sativa s... [more]
H33_ORYCO1.6e-67100.Histone H3.3 OS=Oryza coarctat... [more]
H33_MEDSA1.6e-67100.Histone H3.3 OS=Medicago sativ... [more]
H33_LOLTE1.6e-67100.Histone H3.3 OS=Lolium temulen... [more]
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BLAST of Spo20638.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G40030.23.0e-6998.5Histone superfamily protein[more]
AT4G40040.18.8e-69100.Histone superfamily protein[more]
AT5G10980.18.8e-69100.Histone superfamily protein[more]
AT1G09200.14.1e-6697.0Histone superfamily protein[more]
AT3G27360.14.1e-6697.0Histone superfamily protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 135..151
score: 9.9E-85coord: 95..112
score: 9.9E-85coord: 151..172
score: 9.9E-85coord: 40..54
score: 9.9E-85coord: 54..68
score: 9.9E-85coord: 117..135
score: 9.9E-85coord: 71..92
score: 9.9
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 33..173
score: 6.5E
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 71..173
score: 1.1
IPR000164Histone H3/CENP-APROSITEPS00322HISTONE_H3_1coord: 52..58
scor
IPR000164Histone H3/CENP-APROSITEPS00959HISTONE_H3_2coord: 104..112
scor
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 38..169
score: 7.0
IPR009072Histone-foldGENE3D1.10.20.10coord: 39..171
score: 5.8
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 39..170
score: 1.29

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006007 glucose catabolic process
biological_process GO:0006334 nucleosome assembly
biological_process GO:0006605 protein targeting
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
cellular_component GO:0005840 ribosome
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0008270 zinc ion binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo106430.73Barchart | Table
Spo237470.68Barchart | Table
Spo232360.67Barchart | Table
Spo241080.66Barchart | Table
Spo013620.65Barchart | Table