Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCCCAAGGTTAACGGCGTTGGTGGTGGCGTTGGAGTTAAGGTGAACGCGGTTAACGGTGGGGTTAATGTTAAAGAAACGCATTTCAGAGGTGTAAGGAAGAGACCGTGGGGGAGGTACGCGGCGGAGATTCGTGACCCGACGAAGAAAAGCCGTGTTTGGCTTGGCACGTTTGATACGGCTGAGGAAGCCGCACGTGCTTATGATGATGCTGCACGCGCCTTTCGCGGTGCTAAGGCTAAGACCAATTTCCCACTTCCGTCTGAAATACAGATTAACGCACCCCTCAACCACCACCACCACCACCACTTCAACCACAACCAGAACACCAATTTGAGTTGCAATAATAATAACAATAACCACAGTCCTAGTCAGAGTAGCACCGTGGAATCCTCCAGCCATGAGAAGCCGTCTTCTATCCCGGCTCCGACTACGGCGGTCATGGTCGATTCTCTTCCCTTAGATCTTAACCTTGCCGGAAACTTTGCCGGCGCTGCGGCAGTTGGAGTTAGATTTCCATTCCAACAAGTCCGCGTTGCTCAAGCACCGGCGGTTGGTTTTCCGGCGCAGATGAACCAGTTTTTCTACTTTGACGCCGTTGCGCGTCAAAATCAACATCACCACCACCACCTTCAACAACCGCAGTACATCAATAACCAACAGATAAGGTTTCACCAAATGGTGGCGAGTGAACTCCACGCGCCTCCGACATGCGGTGTTCAGAGCGATTCCGACTCGTCCTCCGTCGTCGATTTCAACCAGGATCTTAACAGTGCTCCTAGAGGTCTCGAGATCGATCTTAACCATCCTCCACCGTCTGATTTAGCTTGA ATGGCTCCCAAGGTTAACGGCGTTGGTGGTGGCGTTGGAGTTAAGGTGAACGCGGTTAACGGTGGGGTTAATGTTAAAGAAACGCATTTCAGAGGTGTAAGGAAGAGACCGTGGGGGAGGTACGCGGCGGAGATTCGTGACCCGACGAAGAAAAGCCGTGTTTGGCTTGGCACGTTTGATACGGCTGAGGAAGCCGCACGTGCTTATGATGATGCTGCACGCGCCTTTCGCGGTGCTAAGGCTAAGACCAATTTCCCACTTCCGTCTGAAATACAGATTAACGCACCCCTCAACCACCACCACCACCACCACTTCAACCACAACCAGAACACCAATTTGAGTTGCAATAATAATAACAATAACCACAGTCCTAGTCAGAGTAGCACCGTGGAATCCTCCAGCCATGAGAAGCCGTCTTCTATCCCGGCTCCGACTACGGCGGTCATGGTCGATTCTCTTCCCTTAGATCTTAACCTTGCCGGAAACTTTGCCGGCGCTGCGGCAGTTGGAGTTAGATTTCCATTCCAACAAGTCCGCGTTGCTCAAGCACCGGCGGTTGGTTTTCCGGCGCAGATGAACCAGTTTTTCTACTTTGACGCCGTTGCGCGTCAAAATCAACATCACCACCACCACCTTCAACAACCGCAGTACATCAATAACCAACAGATAAGGTTTCACCAAATGGTGGCGAGTGAACTCCACGCGCCTCCGACATGCGGTGTTCAGAGCGATTCCGACTCGTCCTCCGTCGTCGATTTCAACCAGGATCTTAACAGTGCTCCTAGAGGTCTCGAGATCGATCTTAACCATCCTCCACCGTCTGATTTAGCTTGA ATGGCTCCCAAGGTTAACGGCGTTGGTGGTGGCGTTGGAGTTAAGGTGAACGCGGTTAACGGTGGGGTTAATGTTAAAGAAACGCATTTCAGAGGTGTAAGGAAGAGACCGTGGGGGAGGTACGCGGCGGAGATTCGTGACCCGACGAAGAAAAGCCGTGTTTGGCTTGGCACGTTTGATACGGCTGAGGAAGCCGCACGTGCTTATGATGATGCTGCACGCGCCTTTCGCGGTGCTAAGGCTAAGACCAATTTCCCACTTCCGTCTGAAATACAGATTAACGCACCCCTCAACCACCACCACCACCACCACTTCAACCACAACCAGAACACCAATTTGAGTTGCAATAATAATAACAATAACCACAGTCCTAGTCAGAGTAGCACCGTGGAATCCTCCAGCCATGAGAAGCCGTCTTCTATCCCGGCTCCGACTACGGCGGTCATGGTCGATTCTCTTCCCTTAGATCTTAACCTTGCCGGAAACTTTGCCGGCGCTGCGGCAGTTGGAGTTAGATTTCCATTCCAACAAGTCCGCGTTGCTCAAGCACCGGCGGTTGGTTTTCCGGCGCAGATGAACCAGTTTTTCTACTTTGACGCCGTTGCGCGTCAAAATCAACATCACCACCACCACCTTCAACAACCGCAGTACATCAATAACCAACAGATAAGGTTTCACCAAATGGTGGCGAGTGAACTCCACGCGCCTCCGACATGCGGTGTTCAGAGCGATTCCGACTCGTCCTCCGTCGTCGATTTCAACCAGGATCTTAACAGTGCTCCTAGAGGTCTCGAGATCGATCTTAACCATCCTCCACCGTCTGATTTAGCTTGA MAPKVNGVGGGVGVKVNAVNGGVNVKETHFRGVRKRPWGRYAAEIRDPTKKSRVWLGTFDTAEEAARAYDDAARAFRGAKAKTNFPLPSEIQINAPLNHHHHHHFNHNQNTNLSCNNNNNNHSPSQSSTVESSSHEKPSSIPAPTTAVMVDSLPLDLNLAGNFAGAAAVGVRFPFQQVRVAQAPAVGFPAQMNQFFYFDAVARQNQHHHHHLQQPQYINNQQIRFHQMVASELHAPPTCGVQSDSDSSSVVDFNQDLNSAPRGLEIDLNHPPPSDLA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo20738.1 vs. NCBI nr
Match: gi|902201069|gb|KNA13889.1| (hypothetical protein SOVF_112560 [Spinacia oleracea]) HSP 1 Score: 542.0 bits (1395), Expect = 6.200e-151 Identity = 276/277 (99.64%), Postives = 276/277 (99.64%), Query Frame = 1
BLAST of Spo20738.1 vs. NCBI nr
Match: gi|731350265|ref|XP_010686416.1| (PREDICTED: ethylene-responsive transcription factor 4 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 325.5 bits (833), Expect = 9.200e-86 Identity = 201/294 (68.37%), Postives = 212/294 (72.11%), Query Frame = 1
BLAST of Spo20738.1 vs. NCBI nr
Match: gi|449332078|gb|AGE97356.1| (ethylene response factor 1 [Tamarix hispida]) HSP 1 Score: 240.0 bits (611), Expect = 5.100e-60 Identity = 173/310 (55.81%), Postives = 193/310 (62.26%), Query Frame = 1
BLAST of Spo20738.1 vs. NCBI nr
Match: gi|927231786|gb|ALD84485.1| (AP2/EREBP family transcription factor-like protein 18 [Prunus pseudocerasus]) HSP 1 Score: 218.0 bits (554), Expect = 2.100e-53 Identity = 153/268 (57.09%), Postives = 173/268 (64.55%), Query Frame = 1
BLAST of Spo20738.1 vs. NCBI nr
Match: gi|953704666|gb|ALO81027.1| (ethylene responsive factor 9 [Prunus persica]) HSP 1 Score: 213.4 bits (542), Expect = 5.100e-52 Identity = 150/268 (55.97%), Postives = 170/268 (63.43%), Query Frame = 1
BLAST of Spo20738.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4L7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_112560 PE=4 SV=1) HSP 1 Score: 542.0 bits (1395), Expect = 4.300e-151 Identity = 276/277 (99.64%), Postives = 276/277 (99.64%), Query Frame = 1
BLAST of Spo20738.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BTZ4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g182660 PE=4 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 6.400e-86 Identity = 201/294 (68.37%), Postives = 212/294 (72.11%), Query Frame = 1
BLAST of Spo20738.1 vs. UniProtKB/TrEMBL
Match: M1KD43_9CARY (Ethylene response factor 1 OS=Tamarix hispida GN=ERF1 PE=2 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 3.500e-60 Identity = 173/310 (55.81%), Postives = 193/310 (62.26%), Query Frame = 1
BLAST of Spo20738.1 vs. UniProtKB/TrEMBL
Match: A0A0M4KYD9_9ROSA (AP2/EREBP family transcription factor-like protein 18 OS=Prunus pseudocerasus PE=2 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 1.400e-53 Identity = 153/268 (57.09%), Postives = 173/268 (64.55%), Query Frame = 1
BLAST of Spo20738.1 vs. UniProtKB/TrEMBL
Match: A0A0S2MYM0_PRUPE (Ethylene responsive factor 9 OS=Prunus persica PE=2 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 3.500e-52 Identity = 150/268 (55.97%), Postives = 170/268 (63.43%), Query Frame = 1
BLAST of Spo20738.1 vs. ExPASy Swiss-Prot
Match: ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris GN=ERF4 PE=2 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.100e-30 Identity = 117/279 (41.94%), Postives = 138/279 (49.46%), Query Frame = 1
BLAST of Spo20738.1 vs. ExPASy Swiss-Prot
Match: ERF4_TOBAC (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum GN=ERF4 PE=1 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.400e-30 Identity = 109/260 (41.92%), Postives = 130/260 (50.00%), Query Frame = 1
BLAST of Spo20738.1 vs. ExPASy Swiss-Prot
Match: ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 5.600e-27 Identity = 65/96 (67.71%), Postives = 71/96 (73.96%), Query Frame = 1
BLAST of Spo20738.1 vs. ExPASy Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 4.500e-24 Identity = 52/69 (75.36%), Postives = 57/69 (82.61%), Query Frame = 1
BLAST of Spo20738.1 vs. ExPASy Swiss-Prot
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.300e-23 Identity = 72/143 (50.35%), Postives = 86/143 (60.14%), Query Frame = 1
BLAST of Spo20738.1 vs. TAIR (Arabidopsis)
Match: AT5G44210.1 (erf domain protein 9) HSP 1 Score: 122.9 bits (307), Expect = 3.200e-28 Identity = 65/96 (67.71%), Postives = 71/96 (73.96%), Query Frame = 1
BLAST of Spo20738.1 vs. TAIR (Arabidopsis)
Match: AT1G28360.1 (ERF domain protein 12) HSP 1 Score: 113.2 bits (282), Expect = 2.500e-25 Identity = 52/69 (75.36%), Postives = 57/69 (82.61%), Query Frame = 1
BLAST of Spo20738.1 vs. TAIR (Arabidopsis)
Match: AT3G15210.1 (ethylene responsive element binding factor 4) HSP 1 Score: 111.7 bits (278), Expect = 7.300e-25 Identity = 72/143 (50.35%), Postives = 86/143 (60.14%), Query Frame = 1
BLAST of Spo20738.1 vs. TAIR (Arabidopsis)
Match: AT1G53170.1 (ethylene response factor 8) HSP 1 Score: 108.2 bits (269), Expect = 8.100e-24 Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 1
BLAST of Spo20738.1 vs. TAIR (Arabidopsis)
Match: AT1G12980.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 107.1 bits (266), Expect = 1.800e-23 Identity = 50/75 (66.67%), Postives = 57/75 (76.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo20738.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo20738.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo20738.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo20738.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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