Spo20741 (gene) | SpinachBase

Overview


Name	Spo20741
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Epidermal patterning factor-like protein 6
Location	Super_scaffold_88 : 383586 .. 388527 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATACACGTACGTGAGGTGAGGTTCCATCTAAAATCCTGTGAACCATACGTAGCTAGCGAGTAAAGGCACTTGACTACACATTTGAATACGGAACAAAGACATATAAGCACATAGAAATGTTGTACCCGACACACAAGTAGAGTGGTTCCTATCAAAAATTCAAAATACATAGACGACGTTATACAAGAAAGTAGGCAGTTACTGTGTATTGAATATAGTGGCCTGATAATTGGAAGGGAGTGAGAAACATTATATGGGCTATGAGAATGTAGTAAGACAATAGGGGTTTAAAAAAGCTGCAAAGGATTCCCCCCATACACATGACATACACTCCCTAACTTGGCAATACAGAGGATCCGACTTCCTCCTCTGCAACATTTTATTTATACTCGTGTTTTTGTGATATGTCTATTTCCTTCTTCCCACTATCACTCTCACTCTGTGTGTTTATTCAGTGTGTACTGTAGTACTGGAGCGCGAATATCTAAACACCTGAAAACATACCGAGGCGAGTGATCAAAGATTTTAAGGGATCAAGCTAGCAGTAATTTTGAGGACTACCGCGAAAGTTGAAGAGAATGAGAAATCCTCGGCGTTACTACTGTGTTTATTCGGTTCTATTGATATTCCTCTTCGCATTCTTCATCTTCCCCTCCATTTGTAAGTTACTACTACTTGGGTAAATACTCTTTTGTTAGACTTAGCTTGATTCATTAACTAGTCTGTTCTCTGTATGTGAATCAGCTCGGGACATCAACTACTTGTTAAACTGCAGAAATCATCATGACTTGCAAATTCAGGTAAACATTTTCTTAATTAATTTAGTTTAGTAATCTTGATTAGTGGTGGTACAACAACTGAACTCCAAGCTATGATTCCGATTCCGTATTTAATTTTGTAATATCGGGTCAGATTTAATTATCGTGGTTGTTGTATGTTAAATTTATGATTTGGACTATGGGCATGATCAGCTTAATTACGAACTGATGGTGATTTCATTATAAATTTATGACTATCGTAGTCTTTAACTCCTTATCCTGACCAGATTCTCTCTGTCTCTCCATTCCCCATATTCTCTTTCAATTATCAAACCCATGGCCGGGATTCCCTTATCATTCCCCTTATTCCCAAATTATTGGCCTTTATTGTTGTGCGCCTTATCTTACTTTGGAAAGGTCATGGTTTAGTAGGCCTGTTTTTTCTCACCGAGACCATGGTGAATTATTGCAAGTAGACAGCACACAGTACTACAGTAGTAGTGTTTACTAGTCACTTAGTCAACTTATCAAATAGTAATCGGAGTATTTTCCCGTCGAAAAAAAGAAAGAAAAAAGTATAGAGTATTTTGAGAGGCGAAACACGTTTGAATAGAGAGTGCTGCAAGGGTTAAATGATATGAATGAGATGAGATGAGATGAGATCTAAAATTTTAGAAAGAAATTGTCAATTACACCTAAGTTTTTAGTGACTTTAGGAATTATTACATTGCTTGTTAAAAGTTGATAATTACCATCTAGGTGTTTCATTATTATTATTGTCAATTATATCATAATCAAATGTAATTTATTTTCAAAACTAATTAAATCAGAAAATTCGAAAAAACCCCAAAAAAAAAATATTTCGGATTTAATTATTTTGGAATTCTATTTTATTTTTAAATTTTAAATAAAATAAAAAAATTAATTAAAATAATTAAAGTATAACTAATGGTTGATTACGCTATGATTAGTGACTAATTGGACGAAATATGAAATAATATAGCAATTGATAACAATAAACAAACACTTAGATGGTAATTAGCAACTTTTAACAAGATATGTAGTAATTCGTAGAGTCACCAAACATCTAGATAGTAGTTGGCAAATTTAAATTTTACAAACACATTCTCTTGGGTTCTGATCAAGTTGCTTGTATTAGACTTTTACATTAACATTAACATTAACATAATACAGAGTGTATCTTATTCTTATTTATTTACTTAACTAAAATGTACCTAAAAATGATATTCAAATAAGAAGTTAATAAAATGATTATTGTTGCAAAGGGATGAATTCTGAGTGAATGTTAATAAAATGATTGGTGGTCCATTGAGAATTTTGAGATTAATTGAACAGCGCGTCTCCTGTGAGACCAGTCACACCATCAACTTGATGGTGTAACGAGCGCGAAACTAATAGCGTGCCTCCCCTAAAACTATATAAAAAAAAAGTAACAGATCTAAACTATAGAAGTAACATGCCTAAACTAAAAAAGTACCTCCTCTAAAATTATAAAAAAAAGAAGTAACATGTCTAAACTATAGAAGTAACATACCTAAACTAAGAAGGTATCTCCCCTAAAACTACTCCCTATAAAAAAAAGTAACGTGTATAAACTATAGAAGTAACATACCTAAAATAAAAAAAGTACCTCCTCTAAAATTATATAAAAAAAAGTAACATGTCTAAACTATAGAAGTAACATACCTAAATTTGCAAGTGTGAACTGGTCTCACCATCAGTTGATGGTGAGGACAGTCTCATATAAGAATTTGGGTTAATTGACATTTATATCTTCAAATGATCCAAGTGGAAAAAATCAGTATTTTGTATGTGTTAGGATTATCTCAATTTTTTTTTAACCATTTCCTATCTTACTCCGCAACTCTATTACATTATACTAAAACAGACACATGTCAATTCCTGATGTAAAATTTTCCTGCCAAAAACATTTTTTCCTAAAAACATATCAACATTTTTTTTAAAAAAAAATTCTATCCTTTTTTTATAAACTGTTTATGTACGGTAAGCAAATATTAGAATAAAAAAATATGAAAATTGATAGATACGGAGTATCACATAATAATAATTTGCTTAAAATAATTTTGGCAATATTTTAGTCAAACAAATATATCAAATAGAAAAATTAGCATATTAAGTACGAAGTATTAAAATATGTAATACGTATAGGATAAAAATTGCATATTAAATGAGTATGTTCAATATTTATTATTATGAATTTGCTTTATGAGGAGAAATAGATCATTAAACAGTTCATATAAAAAATAATTAATGACATATGTGCGTGCACGGAATCTAATATAATACCTCCGTTATTGAAAGTTTTGTAAACTTTCCGTTTAAGTCCGTTCCTGAAAGTTCTTTACACTTATGTTTTATTCTATTTCTGAATATTAAACTTTACTCATTTCTCACCCCATAACATTTATCACTTTCCACTCATTTCTCTTACATCCACCCACATTTTTACACTCCTCACTTATTTTATCCAGTATTTTATTACACTCATCCACCTATTTACAGACTCTCTTTTTTTCGTCTTAATATCAGTGCAAATAGTAACCGTAATGAACATTATGAAATGGAGGTAGTAGTATAACATCTAAACTAGTACGAGTAACAAAAAAAAAGTTCCAAACATCATTCAATTTCCCTTGATGCAATTACAACCGACGATTTAGGAAACAGACCATCCATTTCTTTTAGGGAATGAGGAGGATTTGAGGTCGAATATTATTGATGATGAACATTTCTATTTTAAGCAGCAATGTTTTGTAAGCATTGTAAATTGTATGGGTTTGGCAGCGCATTTAACGGAGCTTTACATGAAGCCAAAGAAAAAACAGAGCCAAACTAATTAACATGCACCCCCGTGATTCCGTGAACTTGTCTTGGCCATATCAATACTGAAATTCAATTAAATGCACGTAGTAGTAAAAGACCTAGTGTAGTGATTTACCCTTTGTATGTTATGGCCTAAAATCTAAATATTTAATAATTGTAATAAATATTGTTTGTAATCTGTTAGCAATGTCTAAAACACAAAGGTTATTGAAAAGTGCAGAAGATATTGAATGGCGTAAAGAGTGGCAAAGATGAACGCGATATAACAAGGAGGATTCTAAGAGGGATAGGGTCATACCCACCACGCTGCGCATCCAAGTGTGGAAACTGCAAACCATGTAAGCCAGTTCATGTTACTGTGCCTCCAGGGGCACCCGTCCCAGCCGAATACTACCCTGAAGCATGGAAGTGTAAATGTGGTAACAGGTTTTACACCCCTTAAAAAAATAATAACCTATCATCTATGTCTGTGTTTTCATGTCACTTTGGCCGAGTTCCGGCTAATTAGCTAGAGTTACAGTTAATTAGTACGGGACTACGGGGTGATATACAAGCTAGTGTATTGATTTTGATGATCATTTGACACATTCAAATCCCGAATACTATTACATTAGCTTTAGCTACACCAACACGGGAATTGAGTAATTCAATTTGGTTTACTCCTCATTAGTATGTATTATTGTAAATAGAGGAGAAATTTGGATAATATAGTACTATATAGGTCTACTAATTGTAATCATATAGTAGTAATGTCTAGAACCATGCACCCTTTGCATGGTTCTGGATTATTTGAAACTCAAGATTTTGCAATTTAATGTACGTGCAATGTTTGTAGTTTTGATGTGATACGACTAATAGGAGCCTCGACGAATTTGCTACACTTTTTTATTGTGTCACTGGAGGGTTTTGTACAGACTTGTGAGTTGTGGTGATACAATATCAAATCCGAACTCCTACTTGATTCTTGAGGAGTAAAATTCCAACTTCCTCGTGTTTTTATTCCAAAATTGTTTTCAATTTGGTGAGAAAATTACATAATATCCTTATTTCCTTACCCATATACGTAGTATCAAATTTTCATAATCATCCTCAGAAAGTCACAAGTAAAGATGGTCGTGGTCCATCCCAAGCCGTGCCTTGTGACAAAGTCATGGGCCTTGAATGGGCCCGGACCGCAACAAACACATTCGTACCTAAGTCTAATTTCACTCAATTTAACGTGTTTTTATTTTGTCGGCTTATGTTGTCGTGCTTTTTCCACAAAAATGTTGCATGAGCCCAACCCACCACTTAAAACTTCGTGGTAGTATCGGACCG

mRNA sequence

AAATACACGTACGTGAGGTGAGGTTCCATCTAAAATCCTGTGAACCATACGTAGCTAGCGAGTAAAGGCACTTGACTACACATTTGAATACGGAACAAAGACATATAAGCACATAGAAATGTTGTACCCGACACACAAGTAGAGTGGTTCCTATCAAAAATTCAAAATACATAGACGACGTTATACAAGAAAGTAGGCAGTTACTGTGTATTGAATATAGTGGCCTGATAATTGGAAGGGAGTGAGAAACATTATATGGGCTATGAGAATGTAGTAAGACAATAGGGGTTTAAAAAAGCTGCAAAGGATTCCCCCCATACACATGACATACACTCCCTAACTTGGCAATACAGAGGATCCGACTTCCTCCTCTGCAACATTTTATTTATACTCGTGTTTTTGTGATATGTCTATTTCCTTCTTCCCACTATCACTCTCACTCTGTGTGTTTATTCAGTGTGTACTGTAGTACTGGAGCGCGAATATCTAAACACCTGAAAACATACCGAGGCGAGTGATCAAAGATTTTAAGGGATCAAGCTAGCAGTAATTTTGAGGACTACCGCGAAAGTTGAAGAGAATGAGAAATCCTCGGCGTTACTACTGTGTTTATTCGGTTCTATTGATATTCCTCTTCGCATTCTTCATCTTCCCCTCCATTTCTCGGGACATCAACTACTTGTTAAACTGCAGAAATCATCATGACTTGCAAATTCAGAAGATATTGAATGGCGTAAAGAGTGGCAAAGATGAACGCGATATAACAAGGAGGATTCTAAGAGGGATAGGGTCATACCCACCACGCTGCGCATCCAAGTGTGGAAACTGCAAACCATGTAAGCCAGTTCATGTTACTGTGCCTCCAGGGGCACCCGTCCCAGCCGAATACTACCCTGAAGCATGGAAGTGTAAATGTGGTAACAGGTTTTACACCCCTTAAAAAAATAATAACCTATCATCTATGTCTGTGTTTTCATGTCACTTTGGCCGAGTTCCGGCTAATTAGCTAGAGTTACAGTTAATTAGTACGGGACTACGGGGTGATATACAAGCTAGTGTATTGATTTTGATGATCATTTGACACATTCAAATCCCGAATACTATTACATTAGCTTTAGCTACACCAACACGGGAATTGAGTAATTCAATTTGGTTTACTCCTCATTAGTATGTATTATTGTAAATAGAGGAGAAATTTGGATAATATAGTACTATATAGGTCTACTAATTGTAATCATATAGTAGTAATGTCTAGAACCATGCACCCTTTGCATGGTTCTGGATTATTTGAAACTCAAGATTTTGCAATTTAATGTACGTGCAATGTTTGTAGTTTTGATGTGATACGACTAATAGGAGCCTCGACGAATTTGCTACACTTTTTTATTGTGTCACTGGAGGGTTTTGTACAGACTTGTGAGTTGTGGTGATACAATATCAAATCCGAACTCCTACTTGATTCTTGAGGAGTAAAATTCCAACTTCCTCGTGTTTTTATTCCAAAATTGTTTTCAATTTGGTGAGAAAATTACATAATATCCTTATTTCCTTACCCATATACGTAGTATCAAATTTTCATAATCATCCTCAGAAAGTCACAAGTAAAGATGGTCGTGGTCCATCCCAAGCCGTGCCTTGTGACAAAGTCATGGGCCTTGAATGGGCCCGGACCGCAACAAACACATTCGTACCTAAGTCTAATTTCACTCAATTTAACGTGTTTTTATTTTGTCGGCTTATGTTGTCGTGCTTTTTCCACAAAAATGTTGCATGAGCCCAACCCACCACTTAAAACTTCGTGGTAGTATCGGACCG

Coding sequence (CDS)

ATGAGAAATCCTCGGCGTTACTACTGTGTTTATTCGGTTCTATTGATATTCCTCTTCGCATTCTTCATCTTCCCCTCCATTTCTCGGGACATCAACTACTTGTTAAACTGCAGAAATCATCATGACTTGCAAATTCAGAAGATATTGAATGGCGTAAAGAGTGGCAAAGATGAACGCGATATAACAAGGAGGATTCTAAGAGGGATAGGGTCATACCCACCACGCTGCGCATCCAAGTGTGGAAACTGCAAACCATGTAAGCCAGTTCATGTTACTGTGCCTCCAGGGGCACCCGTCCCAGCCGAATACTACCCTGAAGCATGGAAGTGTAAATGTGGTAACAGGTTTTACACCCCTTAA

Protein sequence

MRNPRRYYCVYSVLLIFLFAFFIFPSISRDINYLLNCRNHHDLQIQKILNGVKSGKDERDITRRILRGIGSYPPRCASKCGNCKPCKPVHVTVPPGAPVPAEYYPEAWKCKCGNRFYTP

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo20741.1	Spo20741.1	mRNA

Homology

[Close]

BLAST of Spo20741.1 vs. NCBI nr
Match: gi|902198793|gb|KNA13803.1| (hypothetical protein SOVF_113420, partial [Spinacia oleracea])

HSP 1 Score: 249.2 bits (635), Expect = 3.600e-63
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1


		  
Query: 1   MRNPRRYYCVYSVLLIFLFAFFIFPSISRDINYLLNCRNHHDLQIQKILNGVKSGKDERD 60
           MRNPRRYYCVYSVLLIFLFAFFIFPSISRDINYLLNCRNHHDLQIQKILNGVKSGKDERD
Sbjct: 1   MRNPRRYYCVYSVLLIFLFAFFIFPSISRDINYLLNCRNHHDLQIQKILNGVKSGKDERD 60

Query: 61  ITRRILRGIGSYPPRCASKCGNCKPCKPVHVTVPPGAPVPAEYYPEAWKCKCGN 115
           ITRRILRGIGSYPPRCASKCGNCKPCKPVHVTVPPGAPVPAEYYPEAWKCKCGN
Sbjct: 61  ITRRILRGIGSYPPRCASKCGNCKPCKPVHVTVPPGAPVPAEYYPEAWKCKCGN 114

[Close]

BLAST of Spo20741.1 vs. NCBI nr
Match: gi|731349392|ref|XP_010685970.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 146.4 bits (368), Expect = 3.300e-32
Identity = 75/128 (58.59%), Postives = 91/128 (71.09%), Query Frame = 1


		  
Query: 1   MRNPRRYYCVYSVLL---IFLFAFFIFPSISRDI-NYLLNCRNHHDLQIQKILNG----V 60
           MRN  RYY   ++LL   + LF+   FPS  R+I N   NC+NH DL++QK L+     +
Sbjct: 1   MRNHWRYYFCLTLLLLTLVSLFSLINFPSTCREIKNMYFNCKNH-DLKLQKQLSNGGEKI 60

Query: 61  KS-GKDERDITRRILRGIGSYPPRCASKCGNCKPCKPVHVTVPPGAPVPAEYYPEAWKCK 120
           +S  K+E DI RRILRG+GS PPRCASKCG C PCKPVH+ VPPG PV AEYYPEAW+C+
Sbjct: 61  RSHSKNEVDIARRILRGLGSSPPRCASKCGQCTPCKPVHIPVPPGTPVTAEYYPEAWRCQ 120

[Close]

BLAST of Spo20741.1 vs. NCBI nr
Match: gi|870853565|gb|KMT05446.1| (hypothetical protein BVRB_7g175730 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 129.8 bits (325), Expect = 3.200e-27
Identity = 59/89 (66.29%), Postives = 70/89 (78.65%), Query Frame = 1


		  
Query: 36  NCRNHHDLQIQKILNG----VKS-GKDERDITRRILRGIGSYPPRCASKCGNCKPCKPVH 95
           NC+NH DL++QK L+     ++S  K+E DI RRILRG+GS PPRCASKCG C PCKPVH
Sbjct: 4   NCKNH-DLKLQKQLSNGGEKIRSHSKNEVDIARRILRGLGSSPPRCASKCGQCTPCKPVH 63

Query: 96  VTVPPGAPVPAEYYPEAWKCKCGNRFYTP 120
           + VPPG PV AEYYPEAW+C+CGNR Y P
Sbjct: 64  IPVPPGTPVTAEYYPEAWRCQCGNRLYMP 91

[Close]

BLAST of Spo20741.1 vs. NCBI nr
Match: gi|727456903|ref|XP_010510373.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6 isoform X2 [Camelina sativa])

HSP 1 Score: 115.2 bits (287), Expect = 8.100e-23
Identity = 50/73 (68.49%), Postives = 55/73 (75.34%), Query Frame = 1


		  
Query: 48  ILNGVKSGKDERDIT-RRILRGIGSYPPRCASKCGNCKPCKPVHVTVPPGAPVPAEYYPE 107
           I N  K G   +D   RRILRG+GS PPRC SKCG C PC+PVHV VPPG PV AEYYPE
Sbjct: 76  IKNTKKIGDQSKDAELRRILRGLGSSPPRCLSKCGRCTPCRPVHVPVPPGTPVTAEYYPE 135

Query: 108 AWKCKCGNRFYTP 120
           AW+CKCGN+FY P
Sbjct: 136 AWRCKCGNKFYMP 148

[Close]

BLAST of Spo20741.1 vs. NCBI nr
Match: gi|727456901|ref|XP_010510370.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6 isoform X1 [Camelina sativa])

HSP 1 Score: 115.2 bits (287), Expect = 8.100e-23
Identity = 50/73 (68.49%), Postives = 55/73 (75.34%), Query Frame = 1


		  
Query: 48  ILNGVKSGKDERDIT-RRILRGIGSYPPRCASKCGNCKPCKPVHVTVPPGAPVPAEYYPE 107
           I N  K G   +D   RRILRG+GS PPRC SKCG C PC+PVHV VPPG PV AEYYPE
Sbjct: 76  IKNTKKIGDQSKDAELRRILRGLGSSPPRCLSKCGRCTPCRPVHVPVPPGTPVTAEYYPE 135

Query: 108 AWKCKCGNRFYTP 120
           AW+CKCGN+FY P
Sbjct: 136 AWRCKCGNKFYMP 148

[Close]

BLAST of Spo20741.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2R5_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_113420 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 2.500e-63
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1


		  
Query: 1   MRNPRRYYCVYSVLLIFLFAFFIFPSISRDINYLLNCRNHHDLQIQKILNGVKSGKDERD 60
           MRNPRRYYCVYSVLLIFLFAFFIFPSISRDINYLLNCRNHHDLQIQKILNGVKSGKDERD
Sbjct: 1   MRNPRRYYCVYSVLLIFLFAFFIFPSISRDINYLLNCRNHHDLQIQKILNGVKSGKDERD 60

Query: 61  ITRRILRGIGSYPPRCASKCGNCKPCKPVHVTVPPGAPVPAEYYPEAWKCKCGN 115
           ITRRILRGIGSYPPRCASKCGNCKPCKPVHVTVPPGAPVPAEYYPEAWKCKCGN
Sbjct: 61  ITRRILRGIGSYPPRCASKCGNCKPCKPVHVTVPPGAPVPAEYYPEAWKCKCGN 114

[Close]

BLAST of Spo20741.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EQY5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g175730 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.200e-27
Identity = 59/89 (66.29%), Postives = 70/89 (78.65%), Query Frame = 1


		  
Query: 36  NCRNHHDLQIQKILNG----VKS-GKDERDITRRILRGIGSYPPRCASKCGNCKPCKPVH 95
           NC+NH DL++QK L+     ++S  K+E DI RRILRG+GS PPRCASKCG C PCKPVH
Sbjct: 4   NCKNH-DLKLQKQLSNGGEKIRSHSKNEVDIARRILRGLGSSPPRCASKCGQCTPCKPVH 63

Query: 96  VTVPPGAPVPAEYYPEAWKCKCGNRFYTP 120
           + VPPG PV AEYYPEAW+C+CGNR Y P
Sbjct: 64  IPVPPGTPVTAEYYPEAWRCQCGNRLYMP 91

[Close]

BLAST of Spo20741.1 vs. UniProtKB/TrEMBL
Match: V7B894_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G248700g PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.100e-22
Identity = 49/80 (61.25%), Postives = 55/80 (68.75%), Query Frame = 1


		  
Query: 40  HHDLQIQKILNGVKSGKDERDITRRILRGIGSYPPRCASKCGNCKPCKPVHVTVPPGAPV 99
           H D Q  K+++G K         RR+L G GS PPRC SKCG C PCKPVHV VPPG PV
Sbjct: 56  HTDFQENKVVSGGKRDVLSMGWPRRLLGGPGSSPPRCTSKCGKCTPCKPVHVPVPPGTPV 115

Query: 100 PAEYYPEAWKCKCGNRFYTP 120
            AEYYPEAW+CKCGN+ Y P
Sbjct: 116 TAEYYPEAWRCKCGNKLYMP 135

[Close]

BLAST of Spo20741.1 vs. UniProtKB/TrEMBL
Match: V4NXE4_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10017368mg PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.600e-22
Identity = 46/75 (61.33%), Postives = 56/75 (74.67%), Query Frame = 1


		  
Query: 45  IQKILNGVKSGKDERDITRRILRGIGSYPPRCASKCGNCKPCKPVHVTVPPGAPVPAEYY 104
           + K +  + S + +    RRILRG+GS PPRC++KCG C PCKPVHV VPPG PV AEYY
Sbjct: 79  MMKKMRKIISDRSKEAELRRILRGLGSSPPRCSAKCGRCTPCKPVHVPVPPGTPVTAEYY 138

Query: 105 PEAWKCKCGNRFYTP 120
           PEAW+CKCGN+ Y P
Sbjct: 139 PEAWRCKCGNKLYMP 153

[Close]

BLAST of Spo20741.1 vs. UniProtKB/TrEMBL
Match: V4M938_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10017368mg PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.600e-22
Identity = 46/75 (61.33%), Postives = 56/75 (74.67%), Query Frame = 1


		  
Query: 45  IQKILNGVKSGKDERDITRRILRGIGSYPPRCASKCGNCKPCKPVHVTVPPGAPVPAEYY 104
           + K +  + S + +    RRILRG+GS PPRC++KCG C PCKPVHV VPPG PV AEYY
Sbjct: 33  MMKKMRKIISDRSKEAELRRILRGLGSSPPRCSAKCGRCTPCKPVHVPVPPGTPVTAEYY 92

Query: 105 PEAWKCKCGNRFYTP 120
           PEAW+CKCGN+ Y P
Sbjct: 93  PEAWRCKCGNKLYMP 107

[Close]

BLAST of Spo20741.1 vs. ExPASy Swiss-Prot
Match: EPFL6_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.300e-24
Identity = 45/57 (78.95%), Postives = 49/57 (85.96%), Query Frame = 1


		  
Query: 63  RRILRGIGSYPPRCASKCGNCKPCKPVHVTVPPGAPVPAEYYPEAWKCKCGNRFYTP 120
           RRILRG+GS PPRC+SKCG C PCKPVHV VPPG PV AEYYPEAW+CKCGN+ Y P
Sbjct: 100 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156

[Close]

BLAST of Spo20741.1 vs. ExPASy Swiss-Prot
Match: EPFL4_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.300e-17
Identity = 34/52 (65.38%), Postives = 40/52 (76.92%), Query Frame = 1


		  
Query: 68  GIGSYPPRCASKCGNCKPCKPVHVTVPPGAPVPAEYYPEAWKCKCGNRFYTP 120
           G GS PP C SKCG C+PCKPVHV + PG  +P EYYPEAW+CKCGN+ + P
Sbjct: 58  GPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]

BLAST of Spo20741.1 vs. ExPASy Swiss-Prot
Match: EPFL5_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 6.600e-17
Identity = 35/67 (52.24%), Postives = 46/67 (68.66%), Query Frame = 1


		  
Query: 53  KSGKDERDITRRILRGIGSYPPRCASKCGNCKPCKPVHVTVPPGAPVPAEYYPEAWKCKC 112
           +SG   + + ++ L G GS PP C  KCG C+PCK VHV + PG  +P EYYPEAW+CKC
Sbjct: 41  RSGLPGQIVDQKRLGGPGSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKC 100

Query: 113 GNRFYTP 120
           GN+ + P
Sbjct: 101 GNKLFMP 107

[Close]

BLAST of Spo20741.1 vs. TAIR (Arabidopsis)
Match: AT2G30370.1 (allergen-related)

HSP 1 Score: 112.1 bits (279), Expect = 2.400e-25
Identity = 45/57 (78.95%), Postives = 49/57 (85.96%), Query Frame = 1


		  
Query: 63  RRILRGIGSYPPRCASKCGNCKPCKPVHVTVPPGAPVPAEYYPEAWKCKCGNRFYTP 120
           RRILRG+GS PPRC+SKCG C PCKPVHV VPPG PV AEYYPEAW+CKCGN+ Y P
Sbjct: 174 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 230

[Close]

BLAST of Spo20741.1 vs. TAIR (Arabidopsis)
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1))

HSP 1 Score: 90.5 bits (223), Expect = 7.500e-19
Identity = 34/52 (65.38%), Postives = 40/52 (76.92%), Query Frame = 1


		  
Query: 68  GIGSYPPRCASKCGNCKPCKPVHVTVPPGAPVPAEYYPEAWKCKCGNRFYTP 120
           G GS PP C SKCG C+PCKPVHV + PG  +P EYYPEAW+CKCGN+ + P
Sbjct: 58  GPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]

BLAST of Spo20741.1 vs. TAIR (Arabidopsis)
Match: AT3G22820.1 (allergen-related)

HSP 1 Score: 88.2 bits (217), Expect = 3.700e-18
Identity = 35/67 (52.24%), Postives = 46/67 (68.66%), Query Frame = 1


		  
Query: 53  KSGKDERDITRRILRGIGSYPPRCASKCGNCKPCKPVHVTVPPGAPVPAEYYPEAWKCKC 112
           +SG   + + ++ L G GS PP C  KCG C+PCK VHV + PG  +P EYYPEAW+CKC
Sbjct: 41  RSGLPGQIVDQKRLGGPGSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKC 100

Query: 113 GNRFYTP 120
           GN+ + P
Sbjct: 101 GNKLFMP 107

[Close]

BLAST of Spo20741.1 vs. TAIR (Arabidopsis)
Match: AT1G80133.1 (unknown protein)

HSP 1 Score: 49.7 bits (117), Expect = 1.500e-6
Identity = 22/54 (40.74%), Postives = 29/54 (53.70%), Query Frame = 1


		  
Query: 69  IGSYPPRCASKCGNCKPCKPVHVTVPPGAPVPAE---YYPEAWKCKCGNRFYTP 120
           +GS PP CA+KC NCKPC P    +        +   YYP  W C+C +R + P
Sbjct: 46  MGSEPPVCATKCRNCKPCLPYLFDIRGAHDDDDDSEPYYPVKWICRCRDRVFEP 99

The following BLAST results are available for this feature:

BLAST of Spo20741.1 vs. NCBI nr
BLAST of Spo20741.1 vs. UniProtKB/TrEMBL
BLAST of Spo20741.1 vs. ExPASy Swiss-Prot
BLAST of Spo20741.1 vs. TAIR (Arabidopsis)

BLAST of Spo20741.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902198793\|gb\|KNA13803.1\|	3.6e-63	100.	hypothetical protein SOVF_1134...	[more]
gi\|731349392\|ref\|XP_010685970.1\|	3.3e-32	58.5	PREDICTED: EPIDERMAL PATTERNIN...	[more]
gi\|870853565\|gb\|KMT05446.1\|	3.2e-27	66.2	hypothetical protein BVRB_7g17...	[more]
gi\|727456903\|ref\|XP_010510373.1\|	8.1e-23	68.4	PREDICTED: EPIDERMAL PATTERNIN...	[more]
gi\|727456901\|ref\|XP_010510370.1\|	8.1e-23	68.4	PREDICTED: EPIDERMAL PATTERNIN...	[more]

BLAST of Spo20741.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R2R5_SPIOL	2.5e-63	100.	Uncharacterized protein (Fragm...	[more]
A0A0J8EQY5_BETVU	2.2e-27	66.2	Uncharacterized protein OS=Bet...	[more]
V7B894_PHAVU	2.1e-22	61.2	Uncharacterized protein OS=Pha...	[more]
V4NXE4_EUTSA	3.6e-22	61.3	Uncharacterized protein OS=Eut...	[more]
V4M938_EUTSA	3.6e-22	61.3	Uncharacterized protein OS=Eut...	[more]

BLAST of Spo20741.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3


Match Name	E-value	Identity	Description
EPFL6_ARATH	4.3e-24	78.9	EPIDERMAL PATTERNING FACTOR-li...	[more]
EPFL4_ARATH	1.3e-17	65.3	EPIDERMAL PATTERNING FACTOR-li...	[more]
EPFL5_ARATH	6.6e-17	52.2	EPIDERMAL PATTERNING FACTOR-li...	[more]

BLAST of Spo20741.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4


Match Name	E-value	Identity	Description
AT2G30370.1	2.4e-25	78.9	allergen-related	[more]
AT4G14723.1	7.5e-19	65.3	BEST Arabidopsis thaliana prot...	[more]
AT3G22820.1	3.7e-18	52.2	allergen-related	[more]
AT1G80133.1	1.5e-6	40.7	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33109	FAMILY NOT NAMED	coord: 2..119 score: 1.8
None	No IPR available	PANTHER	PTHR33109:SF2	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 6	coord: 2..119 score: 1.8
None	No IPR available	PFAM	PF17181	EPF	coord: 69..119 score: 8.6

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000122	negative regulation of stomatal complex development
biological_process	GO:0015976	carbon utilization
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0009052	pentose-phosphate shunt, non-oxidative branch
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0020037	heme binding
molecular_function	GO:0004751	ribose-5-phosphate isomerase activity
molecular_function	GO:0005488	binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0003677	DNA binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo12092	0.70	Barchart \| Table
Spo19783	0.70	Barchart \| Table
Spo10876	0.69	Barchart \| Table
Spo02279	0.69	Barchart \| Table
Spo26520	0.68	Barchart \| Table
Spo01107	0.68	Barchart \| Table
Spo25727	0.68	Barchart \| Table
Spo03551	0.67	Barchart \| Table
Spo01081	0.66	Barchart \| Table
Spo18174	0.65	Barchart \| Table
Spo05128	0.65	Barchart \| Table