Spo20849 (gene)

Overview
NameSpo20849
Typegene
OrganismSpinacia oleracea (Spinach)
Descriptioncold regulated 314 thylakoid membrane 2
LocationSuper_scaffold_120 : 1638318 .. 1641407 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAAATTTTTTCCAAAATTCCAAAAATAGTACAGGGAGATATTGACCACTACGTAACAGGATCTTGTCACCTCACATAAAATTGAAAGTGACAAGTGCATCACACTCCCGCCATTGCGCCACCCCTTTCGCGCACCATCATCTTACTAACACCCCCGCGGCCCCGCCCCCTTCCCCAACACATTCATCAACAAATTCAATTCAAACACTCAGAAATAATTTCATTGAAAAGTTAAAAAAAATATAATCAGCAAAAATGCAATCCCAATGTCTTTCTCTCTGCTCTTCTCCTCGTCTTTTCGCCGCCGTGGCCCCGCCCAAAGCTGTCTTCTCTTCTCTCCAACAGCGCCCTTCCCATTTTTCATGTCCTTCCTCTGTCAACTTTAATCCACTCAGGTGAATATTCTTTCTATCCTGCTTTTATAAAAGTTTGGAAAAAGGAAATAATGTAGACTAGATTTGATCCACAATACCAACTCCTATACTTTTCTAGTTAAGCTAGTTGACATTTTCTGGCTTTCATTAATATAACATATATTGACTATTGTTGTTATTTTAATCATTTTTTAAAATTCTTATGTGCTACTCCTATTGATTTAATTTTGTGCACAGATTGTCGCTGAATCACCAGAATTTGACGCTGAAGAACAGGAGTAAGCGATCTTCAATGGTTGTCAGTAACTCCTTATCTTCGATTATCTCTCCTCGAAATCTCCCATGGATTTCTGCCGTTTCTACTGCGTAATCATCACATCCCCTTGCTTTAATTCTTCGATTTTGCCTCTATAATTACTTGTGTCGATGACAAATATTATTGTTTGAATTTTAGAATTCGAATTCTCACAATAAATTTGCTGAAAATTATCATAATTTAAAGTTTAATCTGATTTTGTATTTCTGTTTTTGTTATCCATATGAGTTGATGACTACTTGATTTGATTGAAAGATTTTTCACAAACCTAGCAAAACGATGCTTGAATTCACCAAAATTTCTTTAGAAGAAGCTCCCCAAAGTTAATAATGAACATAGGCAATTGATGGAAGATTTCACAAACCTAGCAAAACGATGCTTGGATATCTTTTGTTCTTGCAAAGTGTTGAGATATGAATTGCTAGGATTTTGTTTCGTAATTTTGGCCAAAATAGGCAAGTGCACATCGGGATCAATCCGGCATTTTTGGTTTAATGGATTCATTTCCTATCTCAAACTGATGTGCAGTTAACAATCAGCTAAATTAGAGTGAGTACTTGGGGAATTTGAAAACCAGTATCTATAAATATTTAGTTCTCATGGATATAGGTGCTTCGGGCAAACATGTTTTGTACCGGTGAAGGTCTATTTATGTGCTTCTTCTTACATGTAACTTTTGCCTGGAAAATTCAACAGATAGATTACCCATATTACTCAAAATTTGATCGTGGTGATCATTCTTCAAGCTTACTTGTGAGGACCCTTGATGTCAAATGCAGTTTTGGAAGTATAGGCTTAAATCCCATATCGTGATTCTTCTGCTGTTGGCTATCAGCTTCTTGATTCATCTTTATGAAGCCATCTGATTGTTTCTTCTCTGCTTCGTACTTCAGATATTGATCTGAAAAAACTTATTTTGCACATTTTTATTTACATGTCATACATGTCTTCTTCTATCTCATGCATTTTCCATAGTGTAGAAACACAATTCAATTCCTTTATATATTTATTTGTTTGATCACAAGCTCACGTAATCCTTCTATCTGCTCAGGATTCTCATGCTCGTGAAAGGAACCCCAATACATAAGTCGTTTCTTGTGCCTCTTTTTGCTTTACAGGCACCTGCAAGTGTCATCGCGTGGATGCAGTAAGTTTTTGAAACTTGTTTTCGTTGTTTTGCTGTTCATGACTTTGAACCCCTCTTATATTTTTTGAAAAAGGTTTATGAGTTTTCTTTGCTTCATCAATTTTACAACGTAAGACTTATCTTCAATTTTCAGGGGAGAATATGGTGCTTGGGCAGCTTCTCTAGCCCTCCTTGCCCGCCTCTTCTTCTCTCTTCCAGGTGAGGGCTAAAAACAGTGACTATCATTTTCTCTTCCTCACCCTTTAGAGAACTAAGGAAATGAAATTACTATATATGTTTTAATTAGAGTATGTAAGCATACGTTAAGAGTACGTATGATGGCAATGTCATTAAATCTCCCCGTACTCCCCAATCCAACCCACTTCCACACACCAAAAAAAATGATAATGGAAATTGAAGTGGGTGTTGGGGAATGTAATGGCTAGCAAATTGACATAGGCATTTGAGTGCTTGAACCTTTCTTATCCCCCAAACTGTTTTATTAATGTCATTGATGTTTTTTTATGCATTTCTTTGATCTGTTTGTTCTATTCAGCTGTAGAATGTGCCACTTAATGCTAAGTTATCTTCCCATCCACCCCCCTTGATAGACCATCGATAGCCTGTAGCCTGTAGAGCTGTAGGTATCGATGCTGTTTAATGTCCTTATTTTTTAGTTCCTAACTCGTCTACTTTGTTTGTAGGTGAACTGGAACTCCCTTTCCTTACATTGGTTTTGGTAATTGTTGCTCCACGTCAAGCAATGAACCTAAGGGGGACACAGGCAGGAGCCATTATATCTTTAACAATTGCAGCCTTTTTGGCGTTCCAGCATTTTACAAACACTGGAGGTCTGCAGAAATCATTTGAGCAAGTTTCTATTGTTGCAACTTTAGCCATCATCTGTATCACCGTTGTGCCTGGCCTGCTATTGATTTGATTTTGATGTGGATCAAATTTGTCGACGTCATGTTTATCTTTTAGAAAAAGTAAATAAATTGTGAGTTTTGACAGTATTAGCTTCAGAACCTATGTTGTATATACCAGACAAATGAGTTCCATTGTCACTGTTTTTGTTGGTATATCCAATGAAAATAAAGGTTCTTTTTCACGCTATTCCTACATTTTCATTTGCAACACATTGATTATGCTTCCAATTACTAAGGAAGCTTAGTATCCTAATTATTTATCTGCATATGCAACCTTTATCTTGTCATTATTGAAGGGTGAAATCATAAGAAACTGGAGTTTGGGATAATTTTGTGAAAGTTGAA

mRNA sequence

TTAAATTTTTTCCAAAATTCCAAAAATAGTACAGGGAGATATTGACCACTACGTAACAGGATCTTGTCACCTCACATAAAATTGAAAGTGACAAGTGCATCACACTCCCGCCATTGCGCCACCCCTTTCGCGCACCATCATCTTACTAACACCCCCGCGGCCCCGCCCCCTTCCCCAACACATTCATCAACAAATTCAATTCAAACACTCAGAAATAATTTCATTGAAAAGTTAAAAAAAATATAATCAGCAAAAATGCAATCCCAATGTCTTTCTCTCTGCTCTTCTCCTCGTCTTTTCGCCGCCGTGGCCCCGCCCAAAGCTGTCTTCTCTTCTCTCCAACAGCGCCCTTCCCATTTTTCATGTCCTTCCTCTGTCAACTTTAATCCACTCAGATTGTCGCTGAATCACCAGAATTTGACGCTGAAGAACAGGAGTAAGCGATCTTCAATGGTTGTCAGTAACTCCTTATCTTCGATTATCTCTCCTCGAAATCTCCCATGGATTTCTGCCGTTTCTACTGCGATTCTCATGCTCGTGAAAGGAACCCCAATACATAAGTCGTTTCTTGTGCCTCTTTTTGCTTTACAGGCACCTGCAAGTGTCATCGCGTGGATGCAGGGAGAATATGGTGCTTGGGCAGCTTCTCTAGCCCTCCTTGCCCGCCTCTTCTTCTCTCTTCCAGGTGAACTGGAACTCCCTTTCCTTACATTGGTTTTGGTAATTGTTGCTCCACGTCAAGCAATGAACCTAAGGGGGACACAGGCAGGAGCCATTATATCTTTAACAATTGCAGCCTTTTTGGCGTTCCAGCATTTTACAAACACTGGAGGTCTGCAGAAATCATTTGAGCAAGTTTCTATTGTTGCAACTTTAGCCATCATCTGTATCACCGTTGTGCCTGGCCTGCTATTGATTTGATTTTGATGTGGATCAAATTTGTCGACGTCATGTTTATCTTTTAGAAAAAGTAAATAAATTGTGAGTTTTGACAGTATTAGCTTCAGAACCTATGTTGTATATACCAGACAAATGAGTTCCATTGTCACTGTTTTTGTTGGTATATCCAATGAAAATAAAGGTTCTTTTTCACGCTATTCCTACATTTTCATTTGCAACACATTGATTATGCTTCCAATTACTAAGGAAGCTTAGTATCCTAATTATTTATCTGCATATGCAACCTTTATCTTGTCATTATTGAAGGGTGAAATCATAAGAAACTGGAGTTTGGGATAATTTTGTGAAAGTTGAA

Coding sequence (CDS)

ATGCAATCCCAATGTCTTTCTCTCTGCTCTTCTCCTCGTCTTTTCGCCGCCGTGGCCCCGCCCAAAGCTGTCTTCTCTTCTCTCCAACAGCGCCCTTCCCATTTTTCATGTCCTTCCTCTGTCAACTTTAATCCACTCAGATTGTCGCTGAATCACCAGAATTTGACGCTGAAGAACAGGAGTAAGCGATCTTCAATGGTTGTCAGTAACTCCTTATCTTCGATTATCTCTCCTCGAAATCTCCCATGGATTTCTGCCGTTTCTACTGCGATTCTCATGCTCGTGAAAGGAACCCCAATACATAAGTCGTTTCTTGTGCCTCTTTTTGCTTTACAGGCACCTGCAAGTGTCATCGCGTGGATGCAGGGAGAATATGGTGCTTGGGCAGCTTCTCTAGCCCTCCTTGCCCGCCTCTTCTTCTCTCTTCCAGGTGAACTGGAACTCCCTTTCCTTACATTGGTTTTGGTAATTGTTGCTCCACGTCAAGCAATGAACCTAAGGGGGACACAGGCAGGAGCCATTATATCTTTAACAATTGCAGCCTTTTTGGCGTTCCAGCATTTTACAAACACTGGAGGTCTGCAGAAATCATTTGAGCAAGTTTCTATTGTTGCAACTTTAGCCATCATCTGTATCACCGTTGTGCCTGGCCTGCTATTGATTTGA

Protein sequence

MQSQCLSLCSSPRLFAAVAPPKAVFSSLQQRPSHFSCPSSVNFNPLRLSLNHQNLTLKNRSKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIISLTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo20849.1Spo20849.1mRNA


Homology
[Close]
BLAST of Spo20849.1 vs. NCBI nr
Match: gi|902229644|gb|KNA21561.1| (hypothetical protein SOVF_042130 [Spinacia oleracea])

HSP 1 Score: 409.8 bits (1052), Expect = 2.900e-111
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1 

		  

Query: 1   MQSQCLSLCSSPRLFAAVAPPKAVFSSLQQRPSHFSCPSSVNFNPLRLSLNHQNLTLKNR 60
           MQSQCLSLCSSPRLFAAVAPPKAVFSSLQQRPSHFSCPSSVNFNPLRLSLNHQNLTLKNR
Sbjct: 1   MQSQCLSLCSSPRLFAAVAPPKAVFSSLQQRPSHFSCPSSVNFNPLRLSLNHQNLTLKNR 60

Query: 61  SKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPASVIAW 120
           SKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPASVIAW
Sbjct: 61  SKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPASVIAW 120

Query: 121 MQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIISLTIA 180
           MQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIISLTIA
Sbjct: 121 MQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIISLTIA 180

Query: 181 AFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI 222
           AFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI
Sbjct: 181 AFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI 221
[Close]
BLAST of Spo20849.1 vs. NCBI nr
Match: gi|731373632|ref|XP_010666702.1| (PREDICTED: cold-regulated 413 inner membrane protein 2, chloroplastic-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 275.0 bits (702), Expect = 1.100e-70
Identity = 153/221 (69.23%), Postives = 180/221 (81.45%), Query Frame = 1 

		  

Query: 1   MQSQCLSLCSSPRLFAAVAPPKAVFSSLQQRPSHFSCPSSVNFNPLRLSLNHQNLTLKNR 60
           MQ QCLSL S P  F     P ++ S+L+ R SHF+  SS+NFN LRL LN+      + 
Sbjct: 1   MQWQCLSLSSPPPTFL----PNSLSSTLRLRHSHFASHSSINFNQLRLPLNYHKSMPNHS 60

Query: 61  SKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPASVIAW 120
           S+RSS VV  + S+I+SPRNLPWISAVSTAILMLVKGT I++SFLVPLFALQAPASVI+W
Sbjct: 61  SRRSSRVVCQAYSAILSPRNLPWISAVSTAILMLVKGTAINRSFLVPLFALQAPASVISW 120

Query: 121 MQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIISLTIA 180
           MQGEYGAW+A LALL RLFF +PGELELPF+TLVLVIVAP +A+N+RGTQAG +ISL IA
Sbjct: 121 MQGEYGAWSAFLALLVRLFFFIPGELELPFVTLVLVIVAPHRALNVRGTQAGTVISLVIA 180

Query: 181 AFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI 222
           A+LAF HFT  GGLQKSF+Q SIVATLAIICIT+VP +LL+
Sbjct: 181 AYLAFLHFTKAGGLQKSFDQGSIVATLAIICITIVPCVLLV 217
[Close]
BLAST of Spo20849.1 vs. NCBI nr
Match: gi|590622923|ref|XP_007025182.1| (Cold regulated 314 thylakoid membrane 2 isoform 1 [Theobroma cacao])

HSP 1 Score: 208.8 bits (530), Expect = 1.000e-50
Identity = 110/186 (59.14%), Postives = 142/186 (76.34%), Query Frame = 1 

		  

Query: 36  SCPSSVNFNPLRLSLNHQNLTLKNRSKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLV 95
           S  SS++FNPL  S+ ++ +  K++  R+    +      +SPRNL WIS +S+A+L+L 
Sbjct: 45  SSTSSISFNPLTFSIKYKEIKKKSKGSRAVCYAAP-----LSPRNLQWISTISSAVLLLA 104

Query: 96  KGTPIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLARLFFSLPGELELPFLTLVL 155
           KGT I K FLVPLFA QAPAS+I+WM+GEYG WAA LALL RLFF +PGELELPF+ L+L
Sbjct: 105 KGTAIQKQFLVPLFAFQAPASIISWMKGEYGLWAAFLALLVRLFFYIPGELELPFVALLL 164

Query: 156 VIVAPRQAMNLRGTQAGAIISLTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVV 215
           VIVAP QA+NLRGTQ GAI++L IAA+LAFQHF+  G LQK+ +Q S++AT+AI+CIT V
Sbjct: 165 VIVAPYQAINLRGTQQGAIVALVIAAYLAFQHFSRAGSLQKALDQGSVIATIAIVCITAV 224

Query: 216 PGLLLI 222
             L LI
Sbjct: 225 SFLFLI 225
[Close]
BLAST of Spo20849.1 vs. NCBI nr
Match: gi|641859367|gb|KDO78057.1| (hypothetical protein CISIN_1g027376mg [Citrus sinensis])

HSP 1 Score: 208.4 bits (529), Expect = 1.300e-50
Identity = 116/185 (62.70%), Postives = 142/185 (76.76%), Query Frame = 1 

		  

Query: 39  SSVNFNPLRLSLNHQNLTL--KNRSKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVK 98
           SS  FNPLRLS+NH+ + +  K +S+  S V     +S ++ RNL WIS +S+ +LML K
Sbjct: 43  SSFAFNPLRLSVNHEEMKMVTKRKSRGFSAVC---YASPLTARNLQWISTISSTVLMLAK 102

Query: 99  GTPIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLARLFFSLPGELELPFLTLVLV 158
           GT + KSFLVPLFALQAPA VI+W++GEYG WAA LALL RLFF +PGELELPF+ L+LV
Sbjct: 103 GTAVPKSFLVPLFALQAPADVISWIKGEYGIWAAFLALLVRLFFFIPGELELPFMALLLV 162

Query: 159 IVAPRQAMNLRGTQAGAIISLTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVP 218
           IVAP Q + LRGTQ GAIISL IA +LAFQHF+  G L+K+FEQ S+VATLAIICIT + 
Sbjct: 163 IVAPHQVLTLRGTQQGAIISLVIAGYLAFQHFSRAGNLRKAFEQGSVVATLAIICITALS 222

Query: 219 GLLLI 222
            L LI
Sbjct: 223 CLFLI 224
[Close]
BLAST of Spo20849.1 vs. NCBI nr
Match: gi|568826344|ref|XP_006467533.1| (PREDICTED: cold-regulated 413 inner membrane protein 1, chloroplastic isoform X1 [Citrus sinensis])

HSP 1 Score: 207.2 bits (526), Expect = 2.900e-50
Identity = 115/185 (62.16%), Postives = 142/185 (76.76%), Query Frame = 1 

		  

Query: 39  SSVNFNPLRLSLNHQNLTL--KNRSKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVK 98
           SS  FNPLRLS+NH+ + +  K +S+  S V     ++ ++ RNL WIS +S+ +LML K
Sbjct: 43  SSFAFNPLRLSVNHEEMKMVTKRKSRGFSAVC---YAAPLTARNLQWISTISSTVLMLAK 102

Query: 99  GTPIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLARLFFSLPGELELPFLTLVLV 158
           GT + KSFLVPLFALQAPA VI+W++GEYG WAA LALL RLFF +PGELELPF+ L+LV
Sbjct: 103 GTAVPKSFLVPLFALQAPADVISWIKGEYGIWAAFLALLVRLFFFIPGELELPFMALLLV 162

Query: 159 IVAPRQAMNLRGTQAGAIISLTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVP 218
           IVAP Q + LRGTQ GAIISL IA +LAFQHF+  G L+K+FEQ S+VATLAIICIT + 
Sbjct: 163 IVAPHQVLTLRGTQQGAIISLVIAGYLAFQHFSRAGNLRKAFEQGSVVATLAIICITALS 222

Query: 219 GLLLI 222
            L LI
Sbjct: 223 CLFLI 224
[Close]
BLAST of Spo20849.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RPV5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_042130 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 2.100e-111
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1 

		  

Query: 1   MQSQCLSLCSSPRLFAAVAPPKAVFSSLQQRPSHFSCPSSVNFNPLRLSLNHQNLTLKNR 60
           MQSQCLSLCSSPRLFAAVAPPKAVFSSLQQRPSHFSCPSSVNFNPLRLSLNHQNLTLKNR
Sbjct: 1   MQSQCLSLCSSPRLFAAVAPPKAVFSSLQQRPSHFSCPSSVNFNPLRLSLNHQNLTLKNR 60

Query: 61  SKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPASVIAW 120
           SKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPASVIAW
Sbjct: 61  SKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPASVIAW 120

Query: 121 MQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIISLTIA 180
           MQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIISLTIA
Sbjct: 121 MQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIISLTIA 180

Query: 181 AFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI 222
           AFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI
Sbjct: 181 AFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI 221
[Close]
BLAST of Spo20849.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B4J6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_003940 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 7.900e-71
Identity = 153/221 (69.23%), Postives = 180/221 (81.45%), Query Frame = 1 

		  

Query: 1   MQSQCLSLCSSPRLFAAVAPPKAVFSSLQQRPSHFSCPSSVNFNPLRLSLNHQNLTLKNR 60
           MQ QCLSL S P  F     P ++ S+L+ R SHF+  SS+NFN LRL LN+      + 
Sbjct: 1   MQWQCLSLSSPPPTFL----PNSLSSTLRLRHSHFASHSSINFNQLRLPLNYHKSMPNHS 60

Query: 61  SKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPASVIAW 120
           S+RSS VV  + S+I+SPRNLPWISAVSTAILMLVKGT I++SFLVPLFALQAPASVI+W
Sbjct: 61  SRRSSRVVCQAYSAILSPRNLPWISAVSTAILMLVKGTAINRSFLVPLFALQAPASVISW 120

Query: 121 MQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIISLTIA 180
           MQGEYGAW+A LALL RLFF +PGELELPF+TLVLVIVAP +A+N+RGTQAG +ISL IA
Sbjct: 121 MQGEYGAWSAFLALLVRLFFFIPGELELPFVTLVLVIVAPHRALNVRGTQAGTVISLVIA 180

Query: 181 AFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI 222
           A+LAF HFT  GGLQKSF+Q SIVATLAIICIT+VP +LL+
Sbjct: 181 AYLAFLHFTKAGGLQKSFDQGSIVATLAIICITIVPCVLLV 217
[Close]
BLAST of Spo20849.1 vs. UniProtKB/TrEMBL
Match: A0A061GL44_THECC (Cold regulated 314 thylakoid membrane 2 isoform 1 OS=Theobroma cacao GN=TCM_029560 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 6.900e-51
Identity = 110/186 (59.14%), Postives = 142/186 (76.34%), Query Frame = 1 

		  

Query: 36  SCPSSVNFNPLRLSLNHQNLTLKNRSKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLV 95
           S  SS++FNPL  S+ ++ +  K++  R+    +      +SPRNL WIS +S+A+L+L 
Sbjct: 45  SSTSSISFNPLTFSIKYKEIKKKSKGSRAVCYAAP-----LSPRNLQWISTISSAVLLLA 104

Query: 96  KGTPIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLARLFFSLPGELELPFLTLVL 155
           KGT I K FLVPLFA QAPAS+I+WM+GEYG WAA LALL RLFF +PGELELPF+ L+L
Sbjct: 105 KGTAIQKQFLVPLFAFQAPASIISWMKGEYGLWAAFLALLVRLFFYIPGELELPFVALLL 164

Query: 156 VIVAPRQAMNLRGTQAGAIISLTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVV 215
           VIVAP QA+NLRGTQ GAI++L IAA+LAFQHF+  G LQK+ +Q S++AT+AI+CIT V
Sbjct: 165 VIVAPYQAINLRGTQQGAIVALVIAAYLAFQHFSRAGSLQKALDQGSVIATIAIVCITAV 224

Query: 216 PGLLLI 222
             L LI
Sbjct: 225 SFLFLI 225
[Close]
BLAST of Spo20849.1 vs. UniProtKB/TrEMBL
Match: A0A067GRI6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027376mg PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 9.100e-51
Identity = 116/185 (62.70%), Postives = 142/185 (76.76%), Query Frame = 1 

		  

Query: 39  SSVNFNPLRLSLNHQNLTL--KNRSKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVK 98
           SS  FNPLRLS+NH+ + +  K +S+  S V     +S ++ RNL WIS +S+ +LML K
Sbjct: 43  SSFAFNPLRLSVNHEEMKMVTKRKSRGFSAVC---YASPLTARNLQWISTISSTVLMLAK 102

Query: 99  GTPIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLARLFFSLPGELELPFLTLVLV 158
           GT + KSFLVPLFALQAPA VI+W++GEYG WAA LALL RLFF +PGELELPF+ L+LV
Sbjct: 103 GTAVPKSFLVPLFALQAPADVISWIKGEYGIWAAFLALLVRLFFFIPGELELPFMALLLV 162

Query: 159 IVAPRQAMNLRGTQAGAIISLTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVP 218
           IVAP Q + LRGTQ GAIISL IA +LAFQHF+  G L+K+FEQ S+VATLAIICIT + 
Sbjct: 163 IVAPHQVLTLRGTQQGAIISLVIAGYLAFQHFSRAGNLRKAFEQGSVVATLAIICITALS 222

Query: 219 GLLLI 222
            L LI
Sbjct: 223 CLFLI 224
[Close]
BLAST of Spo20849.1 vs. UniProtKB/TrEMBL
Match: V4UKK5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016585mg PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.400e-50
Identity = 117/191 (61.26%), Postives = 142/191 (74.35%), Query Frame = 1 

		  

Query: 33  SHFSCPSSVNFNPLRLSLNHQNLTL--KNRSKRSSMVVSNSLSSIISPRNLPWISAVSTA 92
           S  S  SS  FNPLRLS+NH+ + +  K +S+  S V     ++ ++ RNL WIS VS+ 
Sbjct: 37  SFSSSSSSFAFNPLRLSVNHEEMKMVTKRKSRGFSAVC---YAAPLTARNLQWISTVSST 96

Query: 93  ILMLVKGTPIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLARLFFSLPGELELPF 152
           +LML KGT + KSFLVPLFALQAPA VI+W++GEYG WAA LALL RLFF +PGELELPF
Sbjct: 97  VLMLAKGTAVPKSFLVPLFALQAPADVISWIKGEYGIWAAFLALLVRLFFFIPGELELPF 156

Query: 153 LTLVLVIVAPRQAMNLRGTQAGAIISLTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAII 212
           +  +LVIVAP Q + LRGTQ GAIISL IA +LAFQHF+  G L+K+FEQ S+VATLAII
Sbjct: 157 MAFLLVIVAPHQVLTLRGTQQGAIISLVIAGYLAFQHFSRAGSLRKAFEQGSVVATLAII 216

Query: 213 CITVVPGLLLI 222
           CIT V    LI
Sbjct: 217 CITAVSCFFLI 224
[Close]
BLAST of Spo20849.1 vs. ExPASy Swiss-Prot
Match: CRIM2_ARATH (Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thaliana GN=COR413IM2 PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 7.900e-48
Identity = 120/225 (53.33%), Postives = 151/225 (67.11%), Query Frame = 1 

		  

Query: 7   SLC-SSPRLFAAVAPPKAVFSSLQQRPSHFS----CPSSVNFNPLRLSLNHQNLTL---- 66
           SLC SS R+ +       +   L+ RPS+ S      S V FNPLRLS + Q        
Sbjct: 3   SLCLSSSRIVSLHHQKPFLALKLRPRPSNISGLGHSTSVVCFNPLRLSADRQRTATVSAR 62

Query: 67  -KNRSKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPAS 126
            + R KR S VV  + + ++S  NL WIS +S   LM  +GT IHKSF+VPLFALQAP  
Sbjct: 63  AEKRRKRGSSVVCYA-TPMLSVHNLQWISTISCVALMFARGTGIHKSFVVPLFALQAPMG 122

Query: 127 VIAWMQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIIS 186
           +++WM+GEYG WAA LALL RLFFS P ELELPF+ L+LVIVAP Q M++RG Q GAI+S
Sbjct: 123 IVSWMKGEYGIWAAFLALLTRLFFSFPVELELPFIALLLVIVAPYQVMSIRGKQEGAILS 182

Query: 187 LTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI 222
           L I+ FLAFQHF+  G LQK+F+Q S++AT+AII +TVV  L LI
Sbjct: 183 LAISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTVVSFLFLI 226
[Close]
BLAST of Spo20849.1 vs. ExPASy Swiss-Prot
Match: CRIM1_ARATH (Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thaliana GN=COR413IM1 PE=1 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.800e-47
Identity = 118/225 (52.44%), Postives = 153/225 (68.00%), Query Frame = 1 

		  

Query: 7   SLCSSPRLFAAVAPPKAVFS-SLQQRPSHFSC----PSSVNFNPLRLSLNHQNLT----- 66
           SLC S     ++   K   S  L+ RPS  S      S V FNPLRLS + Q        
Sbjct: 3   SLCLSSSRIVSLHHQKPFLSLKLRSRPSDLSGLGRHTSPVCFNPLRLSGDRQRTATVSTR 62

Query: 67  LKNRSKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPAS 126
           ++ R KR S VV    ++ IS  +L WIS +S   LML +GT IHKS +VPLFAL AP+S
Sbjct: 63  VEKRRKRGSSVVC--YAAPISANSLQWISTISCLALMLARGTGIHKSVVVPLFALHAPSS 122

Query: 127 VIAWMQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIIS 186
           ++AW++GEYG WAA LAL+ARLFF+ PGELELPF+ L+LVIVAP Q MN+RG Q GAII+
Sbjct: 123 IVAWIKGEYGVWAAFLALIARLFFTFPGELELPFIALLLVIVAPYQVMNIRGKQEGAIIA 182

Query: 187 LTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI 222
           + I+ FLAFQHF+  G L+K++E+ S++AT+AII +TVV  LLL+
Sbjct: 183 IAISGFLAFQHFSRAGSLEKAYEKGSVLATVAIIGVTVVSLLLLL 225
[Close]
BLAST of Spo20849.1 vs. ExPASy Swiss-Prot
Match: CRPM4_ARATH (Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana GN=At4g37220 PE=2 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 1.300e-10
Identity = 45/144 (31.25%), Postives = 77/144 (53.47%), Query Frame = 1 

		  

Query: 81  LPWISAVSTAILMLVKGT----PIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLA 140
           L W +++    L+++  T     +  + LVP      P+ +  +  G++G W A +A++ 
Sbjct: 50  LQWAASIFAIYLLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIV 109

Query: 141 RLFF--SLPGELELPFLTLVLVIVAPRQ-AMNLRGTQAGAIISLTIAAFLAFQHFTNTGG 200
           RLFF    P  LE+P   +++V+V+P   A  LR +  GA+I L IA +L  +H   +GG
Sbjct: 110 RLFFPKEFPEWLEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGG 169

Query: 201 LQKSFEQVS-IVATLAIICITVVP 217
            + SF Q + I  T+ I+ + V P
Sbjct: 170 FKNSFTQKNGISNTIGIVALLVYP 193
[Close]
BLAST of Spo20849.1 vs. ExPASy Swiss-Prot
Match: CRPM2_ARATH (Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana GN=COR413PM2 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.800e-10
Identity = 47/128 (36.72%), Postives = 72/128 (56.25%), Query Frame = 1 

		  

Query: 98  TPIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLARLFFS--LPGELELPFLTLVL 157
           T +  S L+P   L  P+ +  ++ G+ G W A +A++ RLFF    P  LE+P   ++L
Sbjct: 72  TKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVLRLFFPKHFPDWLEMPGSLILL 131

Query: 158 VIVAPR-QAMNLRGTQAGAIISLTIAAFLAFQHFTNTGGLQKSFEQVSIVA-TLAIICIT 217
           ++V+P   A ++RGT  G +ISL I  +L  +H   +GG + SF Q   V+ TL II + 
Sbjct: 132 LVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGGFRNSFTQPRGVSNTLGIILLL 191

Query: 218 VVPGLLLI 222
           V P   LI
Sbjct: 192 VYPVWALI 199
[Close]
BLAST of Spo20849.1 vs. ExPASy Swiss-Prot
Match: CRPM1_ARATH (Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana GN=COR413PM1 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.800e-7
Identity = 45/149 (30.20%), Postives = 75/149 (50.34%), Query Frame = 1 

		  

Query: 81  LPWISAVSTAILMLVKGTP----IHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLA 140
           L W+++++   L+++  T     +  S L+P      P+ +    +GE G W A +A++ 
Sbjct: 48  LEWVASIAAIYLLVLDRTNWKTNMLTSLLIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVV 107

Query: 141 RLFFSLPGE--LELPFLTLVLVIVAPRQ-AMNLRGTQAGAIISLTIAAFLAFQHFTNTGG 200
           +LFF       LELP   ++L +VAP   A   R +  G  I L I  +L  +H   +GG
Sbjct: 108 QLFFPKHAREYLELPVALVLLAVVAPNLIAGTFRDSWIGLAICLGIGCYLLQEHIRASGG 167

Query: 201 LQKSFEQVS-IVATLAIICITVVPGLLLI 222
            + +F + + I  T+ IIC+ V P   LI
Sbjct: 168 FRNAFTKANGISNTVGIICLVVFPVWALI 196
[Close]
BLAST of Spo20849.1 vs. TAIR (Arabidopsis)
Match: AT1G29390.1 (cold regulated 314 thylakoid membrane 2)

HSP 1 Score: 191.8 bits (486), Expect = 4.400e-49
Identity = 120/225 (53.33%), Postives = 151/225 (67.11%), Query Frame = 1 

		  

Query: 7   SLC-SSPRLFAAVAPPKAVFSSLQQRPSHFS----CPSSVNFNPLRLSLNHQNLTL---- 66
           SLC SS R+ +       +   L+ RPS+ S      S V FNPLRLS + Q        
Sbjct: 3   SLCLSSSRIVSLHHQKPFLALKLRPRPSNISGLGHSTSVVCFNPLRLSADRQRTATVSAR 62

Query: 67  -KNRSKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPAS 126
            + R KR S VV  + + ++S  NL WIS +S   LM  +GT IHKSF+VPLFALQAP  
Sbjct: 63  AEKRRKRGSSVVCYA-TPMLSVHNLQWISTISCVALMFARGTGIHKSFVVPLFALQAPMG 122

Query: 127 VIAWMQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIIS 186
           +++WM+GEYG WAA LALL RLFFS P ELELPF+ L+LVIVAP Q M++RG Q GAI+S
Sbjct: 123 IVSWMKGEYGIWAAFLALLTRLFFSFPVELELPFIALLLVIVAPYQVMSIRGKQEGAILS 182

Query: 187 LTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI 222
           L I+ FLAFQHF+  G LQK+F+Q S++AT+AII +TVV  L LI
Sbjct: 183 LAISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTVVSFLFLI 226
[Close]
BLAST of Spo20849.1 vs. TAIR (Arabidopsis)
Match: AT1G29395.1 (COLD REGULATED 314 INNER MEMBRANE 1)

HSP 1 Score: 190.7 bits (483), Expect = 9.900e-49
Identity = 118/225 (52.44%), Postives = 153/225 (68.00%), Query Frame = 1 

		  

Query: 7   SLCSSPRLFAAVAPPKAVFS-SLQQRPSHFSC----PSSVNFNPLRLSLNHQNLT----- 66
           SLC S     ++   K   S  L+ RPS  S      S V FNPLRLS + Q        
Sbjct: 3   SLCLSSSRIVSLHHQKPFLSLKLRSRPSDLSGLGRHTSPVCFNPLRLSGDRQRTATVSTR 62

Query: 67  LKNRSKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPAS 126
           ++ R KR S VV    ++ IS  +L WIS +S   LML +GT IHKS +VPLFAL AP+S
Sbjct: 63  VEKRRKRGSSVVC--YAAPISANSLQWISTISCLALMLARGTGIHKSVVVPLFALHAPSS 122

Query: 127 VIAWMQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIIS 186
           ++AW++GEYG WAA LAL+ARLFF+ PGELELPF+ L+LVIVAP Q MN+RG Q GAII+
Sbjct: 123 IVAWIKGEYGVWAAFLALIARLFFTFPGELELPFIALLLVIVAPYQVMNIRGKQEGAIIA 182

Query: 187 LTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI 222
           + I+ FLAFQHF+  G L+K++E+ S++AT+AII +TVV  LLL+
Sbjct: 183 IAISGFLAFQHFSRAGSLEKAYEKGSVLATVAIIGVTVVSLLLLL 225
[Close]
BLAST of Spo20849.1 vs. TAIR (Arabidopsis)
Match: AT4G37220.1 (Cold acclimation protein WCOR413 family)

HSP 1 Score: 68.2 bits (165), Expect = 7.400e-12
Identity = 45/144 (31.25%), Postives = 77/144 (53.47%), Query Frame = 1 

		  

Query: 81  LPWISAVSTAILMLVKGT----PIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLA 140
           L W +++    L+++  T     +  + LVP      P+ +  +  G++G W A +A++ 
Sbjct: 50  LQWAASIFAIYLLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIV 109

Query: 141 RLFF--SLPGELELPFLTLVLVIVAPRQ-AMNLRGTQAGAIISLTIAAFLAFQHFTNTGG 200
           RLFF    P  LE+P   +++V+V+P   A  LR +  GA+I L IA +L  +H   +GG
Sbjct: 110 RLFFPKEFPEWLEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGG 169

Query: 201 LQKSFEQVS-IVATLAIICITVVP 217
            + SF Q + I  T+ I+ + V P
Sbjct: 170 FKNSFTQKNGISNTIGIVALLVYP 193
[Close]
BLAST of Spo20849.1 vs. TAIR (Arabidopsis)
Match: AT3G50830.1 (cold-regulated 413-plasma membrane 2)

HSP 1 Score: 66.6 bits (161), Expect = 2.200e-11
Identity = 47/128 (36.72%), Postives = 72/128 (56.25%), Query Frame = 1 

		  

Query: 98  TPIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLARLFFS--LPGELELPFLTLVL 157
           T +  S L+P   L  P+ +  ++ G+ G W A +A++ RLFF    P  LE+P   ++L
Sbjct: 72  TKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVLRLFFPKHFPDWLEMPGSLILL 131

Query: 158 VIVAPR-QAMNLRGTQAGAIISLTIAAFLAFQHFTNTGGLQKSFEQVSIVA-TLAIICIT 217
           ++V+P   A ++RGT  G +ISL I  +L  +H   +GG + SF Q   V+ TL II + 
Sbjct: 132 LVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGGFRNSFTQPRGVSNTLGIILLL 191

Query: 218 VVPGLLLI 222
           V P   LI
Sbjct: 192 VYPVWALI 199
[Close]
BLAST of Spo20849.1 vs. TAIR (Arabidopsis)
Match: AT2G15970.1 (cold regulated 413 plasma membrane 1)

HSP 1 Score: 57.8 bits (138), Expect = 1.000e-8
Identity = 45/149 (30.20%), Postives = 75/149 (50.34%), Query Frame = 1 

		  

Query: 81  LPWISAVSTAILMLVKGTP----IHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLA 140
           L W+++++   L+++  T     +  S L+P      P+ +    +GE G W A +A++ 
Sbjct: 48  LEWVASIAAIYLLVLDRTNWKTNMLTSLLIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVV 107

Query: 141 RLFFSLPGE--LELPFLTLVLVIVAPRQ-AMNLRGTQAGAIISLTIAAFLAFQHFTNTGG 200
           +LFF       LELP   ++L +VAP   A   R +  G  I L I  +L  +H   +GG
Sbjct: 108 QLFFPKHAREYLELPVALVLLAVVAPNLIAGTFRDSWIGLAICLGIGCYLLQEHIRASGG 167

Query: 201 LQKSFEQVS-IVATLAIICITVVPGLLLI 222
            + +F + + I  T+ IIC+ V P   LI
Sbjct: 168 FRNAFTKANGISNTVGIICLVVFPVWALI 196
The following BLAST results are available for this feature:
BLAST of Spo20849.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902229644|gb|KNA21561.1|2.9e-111100.hypothetical protein SOVF_0421... [more]
gi|731373632|ref|XP_010666702.1|1.1e-7069.2PREDICTED: cold-regulated 413 ... [more]
gi|590622923|ref|XP_007025182.1|1.0e-5059.1Cold regulated 314 thylakoid m... [more]
gi|641859367|gb|KDO78057.1|1.3e-5062.7hypothetical protein CISIN_1g0... [more]
gi|568826344|ref|XP_006467533.1|2.9e-5062.1PREDICTED: cold-regulated 413 ... [more]
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BLAST of Spo20849.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RPV5_SPIOL2.1e-111100.Uncharacterized protein OS=Spi... [more]
A0A0J8B4J6_BETVU7.9e-7169.2Uncharacterized protein OS=Bet... [more]
A0A061GL44_THECC6.9e-5159.1Cold regulated 314 thylakoid m... [more]
A0A067GRI6_CITSI9.1e-5162.7Uncharacterized protein OS=Cit... [more]
V4UKK5_9ROSI3.4e-5061.2Uncharacterized protein OS=Cit... [more]
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BLAST of Spo20849.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CRIM2_ARATH7.9e-4853.3Cold-regulated 413 inner membr... [more]
CRIM1_ARATH1.8e-4752.4Cold-regulated 413 inner membr... [more]
CRPM4_ARATH1.3e-1031.2Cold-regulated 413 plasma memb... [more]
CRPM2_ARATH3.8e-1036.7Cold-regulated 413 plasma memb... [more]
CRPM1_ARATH1.8e-730.2Cold-regulated 413 plasma memb... [more]
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BLAST of Spo20849.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G29390.14.4e-4953.3cold regulated 314 thylakoid m... [more]
AT1G29395.19.9e-4952.4COLD REGULATED 314 INNER MEMBR... [more]
AT4G37220.17.4e-1231.2Cold acclimation protein WCOR4... [more]
AT3G50830.12.2e-1136.7cold-regulated 413-plasma memb... [more]
AT2G15970.11.0e-830.2cold regulated 413 plasma memb... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008892Cold-regulated 413 proteinPFAMPF05562WCOR413coord: 49..212
score: 2.3
NoneNo IPR availablePANTHERPTHR33596FAMILY NOT NAMEDcoord: 28..221
score: 2.5
NoneNo IPR availablePANTHERPTHR33596:SF3COLD-REGULATED 413 INNER MEMBRANE PROTEIN 1, CHLOROPLASTIC-RELATEDcoord: 28..221
score: 2.5

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0009108 coenzyme biosynthetic process
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006508 proteolysis
biological_process GO:0015976 carbon utilization
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0016311 dephosphorylation
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0030154 cell differentiation
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0010286 heat acclimation
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0010155 regulation of proton transport
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0009987 cellular process
biological_process GO:0006546 glycine catabolic process
biological_process GO:0043090 amino acid import
biological_process GO:0030007 cellular potassium ion homeostasis
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0050832 defense response to fungus
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0000226 microtubule cytoskeleton organization
biological_process GO:0009651 response to salt stress
biological_process GO:0007165 signal transduction
biological_process GO:0042908 xenobiotic transport
biological_process GO:0009595 detection of biotic stimulus
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0009637 response to blue light
biological_process GO:0000023 maltose metabolic process
biological_process GO:0048444 floral organ morphogenesis
biological_process GO:0010325 raffinose family oligosaccharide biosynthetic process
biological_process GO:0009939 positive regulation of gibberellic acid mediated signaling pathway
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0009306 protein secretion
biological_process GO:0042538 hyperosmotic salinity response
biological_process GO:0045892 negative regulation of transcription, DNA-templated
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0006768 biotin metabolic process
biological_process GO:0009414 response to water deprivation
biological_process GO:0006446 regulation of translational initiation
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0009058 biosynthetic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0044249 cellular biosynthetic process
biological_process GO:0009737 response to abscisic acid
biological_process GO:0009863 salicylic acid mediated signaling pathway
biological_process GO:0010218 response to far red light
biological_process GO:0030091 protein repair
biological_process GO:0009644 response to high light intensity
biological_process GO:0010114 response to red light
biological_process GO:0006364 rRNA processing
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0009845 seed germination
biological_process GO:0006464 cellular protein modification process
biological_process GO:0006979 response to oxidative stress
biological_process GO:0006771 riboflavin metabolic process
biological_process GO:0010162 seed dormancy process
biological_process GO:0019497 hexachlorocyclohexane metabolic process
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0010207 photosystem II assembly
biological_process GO:0010206 photosystem II repair
biological_process GO:0009657 plastid organization
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009684 indoleacetic acid biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0006560 proline metabolic process
biological_process GO:0048481 plant ovule development
biological_process GO:0008152 metabolic process
biological_process GO:0006526 arginine biosynthetic process
biological_process GO:0043900 regulation of multi-organism process
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0010200 response to chitin
biological_process GO:0009409 response to cold
biological_process GO:0019432 triglyceride biosynthetic process
biological_process GO:0009735 response to cytokinin
biological_process GO:0015671 oxygen transport
biological_process GO:0006631 fatty acid metabolic process
biological_process GO:0019748 secondary metabolic process
biological_process GO:0019253 reductive pentose-phosphate cycle
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0080005 photosystem stoichiometry adjustment
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0015979 photosynthesis
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0006569 tryptophan catabolic process
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0006591 ornithine metabolic process
biological_process GO:0010342 endosperm cellularization
biological_process GO:0030244 cellulose biosynthetic process
biological_process GO:0009106 lipoate metabolic process
biological_process GO:0006007 glucose catabolic process
biological_process GO:0000914 phragmoplast assembly
biological_process GO:0009755 hormone-mediated signaling pathway
biological_process GO:0009723 response to ethylene
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0000165 MAPK cascade
biological_process GO:0009750 response to fructose
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0009749 response to glucose
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0009744 response to sucrose
biological_process GO:0009052 pentose-phosphate shunt, non-oxidative branch
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0006810 transport
cellular_component GO:0010287 plastoglobule
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009536 plastid
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005829 cytosol
cellular_component GO:0009507 chloroplast
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009523 photosystem II
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0031977 thylakoid lumen
cellular_component GO:0005618 cell wall
cellular_component GO:0019005 SCF ubiquitin ligase complex
cellular_component GO:0009348 ornithine carbamoyltransferase complex
cellular_component GO:0009506 plasmodesma
cellular_component GO:0045298 tubulin complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005840 ribosome
cellular_component GO:0005634 nucleus
cellular_component GO:0044464 cell part
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0000325 plant-type vacuole
cellular_component GO:0009579 thylakoid
cellular_component GO:0005730 nucleolus
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008693 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0005344 oxygen carrier activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0008017 microtubule binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATPase activity
molecular_function GO:0004585 ornithine carbamoyltransferase activity
molecular_function GO:0016597 amino acid binding
molecular_function GO:0019825 oxygen binding
molecular_function GO:0016866 intramolecular transferase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0020037 heme binding
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0005198 structural molecule activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0016829 lyase activity
molecular_function GO:0010181 FMN binding
molecular_function GO:0008113 peptide-methionine (S)-S-oxide reductase activity
molecular_function GO:0008565 protein transporter activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity
molecular_function GO:0003993 acid phosphatase activity
molecular_function GO:0008430 selenium binding
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008559 xenobiotic transmembrane transporting ATPase activity
molecular_function GO:0008281 sulfonylurea receptor activity
molecular_function GO:0004751 ribose-5-phosphate isomerase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo025730.80Barchart | Table
Spo060040.79Barchart | Table
Spo214460.79Barchart | Table
Spo097690.78Barchart | Table
Spo134470.78Barchart | Table
Spo216600.76Barchart | Table
Spo208690.76Barchart | Table
Spo072970.76Barchart | Table
Spo095540.76Barchart | Table
Spo093350.76Barchart | Table
Spo046530.75Barchart | Table
Spo237120.75Barchart | Table
Spo266970.75Barchart | Table
Spo037570.75Barchart | Table
Spo233630.74Barchart | Table
Spo251960.74Barchart | Table
Spo008720.74Barchart | Table
Spo240460.74Barchart | Table
Spo076630.74Barchart | Table
Spo184000.74Barchart | Table
Spo123700.73Barchart | Table
Spo209520.73Barchart | Table
Spo228110.73Barchart | Table
Spo102350.73Barchart | Table
Spo233840.72Barchart | Table
Spo031950.72Barchart | Table
Spo123020.72Barchart | Table
Spo131930.72Barchart | Table
Spo133930.72Barchart | Table
Spo136910.72Barchart | Table
Spo049960.72Barchart | Table
Spo146780.71Barchart | Table
Spo004980.71Barchart | Table
Spo175780.71Barchart | Table
Spo256920.71Barchart | Table
Spo300040.70Barchart | Table
Spo002560.70Barchart | Table
Spo013050.70Barchart | Table
Spo026960.70Barchart | Table
Spo062930.70Barchart | Table
Spo147790.70Barchart | Table
Spo153720.70Barchart | Table
Spo162400.70Barchart | Table
Spo201520.70Barchart | Table
Spo246750.70Barchart | Table
Spo269110.70Barchart | Table
Spo270810.70Barchart | Table
Spo069530.69Barchart | Table
Spo205440.69Barchart | Table
Spo050730.69Barchart | Table
Spo051350.69Barchart | Table
Spo281860.69Barchart | Table
Spo108350.69Barchart | Table
Spo273460.69Barchart | Table
Spo169550.69Barchart | Table
Spo169960.68Barchart | Table
Spo243250.68Barchart | Table
Spo117390.68Barchart | Table
Spo171610.68Barchart | Table
Spo134900.68Barchart | Table
Spo178280.68Barchart | Table
Spo188280.68Barchart | Table
Spo115090.68Barchart | Table
Spo115240.68Barchart | Table
Spo142250.68Barchart | Table
Spo212150.68Barchart | Table
Spo236750.68Barchart | Table
Spo237210.68Barchart | Table
Spo239070.68Barchart | Table
Spo116880.68Barchart | Table
Spo250080.67Barchart | Table
Spo054020.67Barchart | Table
Spo273640.67Barchart | Table
Spo102840.67Barchart | Table
Spo172500.67Barchart | Table
Spo264300.67Barchart | Table
Spo051030.67Barchart | Table
Spo130290.67Barchart | Table
Spo244250.67Barchart | Table
Spo260060.67Barchart | Table
Spo122280.66Barchart | Table
Spo002050.66Barchart | Table
Spo185780.66Barchart | Table
Spo203870.66Barchart | Table
Spo211440.66Barchart | Table
Spo062780.66Barchart | Table
Spo235310.66Barchart | Table
Spo029320.66Barchart | Table
Spo026650.66Barchart | Table
Spo268580.66Barchart | Table
Spo248570.65Barchart | Table
Spo017140.65Barchart | Table
Spo104930.65Barchart | Table
Spo108640.65Barchart | Table
Spo247320.65Barchart | Table
Spo280580.65Barchart | Table
Spo240810.65Barchart | Table
Spo087130.65Barchart | Table
Spo089350.65Barchart | Table
Spo025130.65Barchart | Table