Spo20885 (gene) | SpinachBase

Overview


Name	Spo20885
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	3-ketoacyl-CoA thiolase 2, peroxisomal
Location	SpoScf_02658 : 29449 .. 38437 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTGTGTGCGTGTGTGCTATGCGATGGGCGAGGGCGACGATGCAAGGCACGAGTGACGAGCAAGACGCGTGTGGGCATCGATGCTGCCGCGCCACAGCGCGCCTGGCTCGCCCAGCCAGTAAGCAGAACGCGCGAGCAGGGAGCGATCCTTCGCTCGCCGCGCGCTGGCCTGCGCAGCAACACGCGGCACAGTACAAGGCTGCGCGCAGCGTGGCCAGCTGTGGCGTGTCGCTGTGTGTGCTTTGTGCTACGATCAATCGAACGGGGCGCGAGCCTCGTAGCTTGATGGGGCTTGGGCGCAAGCCCAAGTGCCTCGTCTCGCGACGATTGGTACGTTTTGATTTTAATTTTAATTTTTAGTTCGGAAACGATTTTAATTAATTTTAAAATTCGAAATTTAAATTGTTTTCTTGGATTTTAATTTTGAATATTATAATTATTATAAATTTTATTTATACTAATTATTTGACTAAAATTAAATCTTGAATTAATTTAAATTCGTTTAATTCAACTGAAATAAATTAAATTAATGGATTCGATTATAAATTTATATGAGCTTTAAATTTTAATTAAATTTGTATGTTTCCGGCTAGACTAGAAATACATTTTTATGTTTAAAATTAGTAAAGCATATGAATTTATTGGTTTAAGTGGGATCATTTTTAGTCATAAACTCTTGATTAGGTCTACAAATCCCTTAAGGTTAAACAACTTGATTAGAATTAATAAGGACTGAATAATTGGTAGATTATTGGTGCCCTTAATTAATTGCTGCAAATATTTATGTGATGCATAACGTGTTTTACTAACCAGCTATGTGGGCCATTCATGATAATGAATGAGTGAATGGTATATATTGTATATGTATTGTTTTGCAGGTTATGAAGTGACTAGTATGGCCCAAATAGGATAGAAAATATGGTCTGCGTACCATTAATTTGAATGTAATTGGTCTAAAGTACCAAAATTGTTTTTCAATTCAAATATGGTCTGCGTACCATCAAATAGTTGTAATTAGTTTAATTATAGCTTATCCTATTTGAAGAAAATGGCGCCTCCCACGGAGATTTTCAAGACGGACTTTGAAGTTGAAGCTTCAAGATGAAGTCGGGCCATACTAGATCACATTTATCTTATGCATGTTTTAAGTTATTTATTGCTTTTAAATATGTCTTAAATATGCATGAGATCAAAGCTTGATTATGTTGCATGATTAAGGATTTTAGTTCACTTAAAATCTAACCAACATAGTAAGAGCCTTAAGTTCCAAACTTAAAAATTGAGTTAAAAGGTGCCATGCCAAAATAACACTTACTTGGATATCCTTTTTTCATCGATCTTAGTAATAGTTTTCCGCCATAGCGAGGTGTTACTTATCGATACTAAAGGGGTAAGGTACACAAATAATTGTGAGTACATGTTAGTTTTGGTGAAACTCAACGATATAAGTAAGGAGTCCTTTTATGTCGTGGCAAAATCGATAGGTTTACCTAATAAGTTCTTAGACGTACCTATCAACCAAGAGTAGTTTCTAGACTATTAGCAAAAGGCTTTTGCTTACCTAAAAGATTTTAGAATTAAGTCTAAATACATAATGTGCTTAATTCTTCAATGATTTTTAGGGTCTTGGAATCATTTTATTCACACCTGCCGGAACACATAACTCGAATAAAATGCTAATGACTTGTTTAAATTGCATGATTGCTTTAATTTTCAAGTTATTACTCATGATAAATGTTTAGACTTTGCATGCTTCAATGTATGTTTTAATTATTGTTTATAATTAAATATCTTGCACTGCAATAAATCCTTTTAGAAAGGTAACAGTAAATTTACTCGATTGGTTGTGAATCCAAGAACGATTCACGGAAATGAGAGAAAGTGAGCAATTTAAAATGTACGTTTCTTATAGAGACTTTTATGGTTGTTTTCGAATATCAAAGTCGAATGGCAAAGCGATTGGTGCTTGTGAATTCAAAATACAATGTAGTTTTGAGATCATAAAGCATTGAGTTTAAACGCTCAGCTTTACCAATGATTAGCAACCTAATATCTTTTTCCATTTAATTCTCGAATGAGTCTAGTCACAAGACATTCGAATAGGTCGATGCTTAGAGAACTTTAAAAGCTTCTGGTAAGATCATCTAGTTGAAACAGAATATTCAAACATAAAATCGTAAGAACTTTGTTGTAGTGACATTGGACATGTCTAAACAAAGTATAAAAGTCAACACTAAAGAATTTAATTCTTAAAGCTATTAGAAAGGGTACAAGAAATAGGAAGACAAGGAACAAATGAAAGGGATTTACGATTCCGTTTCTACCTATAAGTTTATGTTTAAAGAGAAGTAACCTAGCAATCAAACTTCATTGGTATCATATACCGCTTGAGGTTCTTACTTCAGTAATAACTCAAACAATGGAAGCTAGGCTACACTAATGGCCTACAAGTGGGAAATGAAGCATGGCAATGCTACATTAGTTGTAGGGTCATCTAGTTTGTTTTAAGTCCTTTCAAAGGCTGGAACTTAATGGCTATTTTGTTCCATAATCAGCATACTTAAATTTCTGCTTCAAACACAGAAAGACTCACATTCAGAAGAACAAAAACAATGCTTGTTTGTTTGTTTATTTGAATGAAATGGTCATTTACGGGTTGAGTCAATATGCTTGATTAAAACAAACAACTCTTTAACAATAAGAACTTTACTAGGTTCAAATCAATATCTTGATTTGAGTTCCACTAATCTTTGGCATTGTTGCTTAGACTATATCAACAAGTTAACATTCAAAATCTCTGTTTTGATGGAATTTTGAAAGTTGATTGATTTCTAGATCATTCAAGACGAGCTAGTCTTACTTGTTGAAAGTAACAAAAGATATGAACTATTGTTAGAACGCCTAGACCATAGAGTTCAAAGCTAAAGAAAGATTTTATGACTTTATTATTTCACATGGTTTTGAGTGAATATGGACTTATTTACTCAATGTGATATAAGTTTGAATCTGTTTGGCAAGTTCAAAGATTCAAAAGTATAAAATCCACTTGGCAAGAAATCATAAAGATCTAGATTAGATCATGTCGATGATTACTTTAAGACCAAAAATGATCATCAATGATTGTGTGTTGCAATTTCACGATCTAGCTCCATAAGATATGGCATATCTACGTTGGAATGATCGAAGTCAATTAGTATTTGATTCGATCAATGATGAATCATTAACTTTTCCTATAATTTCTAAAACAAAATGCTCAACTACCACCAAACTAAACCAAATTCGTCAAAGCTATTGAAAAGTAATTTCAGAATATCTTTTCATAATATATATCTAGAGAGTTGCTAAACTCAGTGGGAGCTTAGTGTTTGTCATTCGACAAACTAAGGCCCAAGTATAGATATATGTTTCATTGTGATGTATTCAAATGAGACACAAGGGTATTGTTTCTACCACGAATTTTTGAGAACATAATGTTTGTTTGCTCAAAATAATGTCCTTTTGGAGATTCGTTTCCAAAATGACAAGTGGGAGAAAATAGACCTCGAAAGTCTTCGAGGCGAACAACAAATATAAACGGACATTCCGGAGGCTTTTCGAAGTGCTTCAGAAAATCTGAACTTATTCTTTGAGGACTTTAGAAGTGGCTTTAAAGAATAGACATCTCTTAGAAGACTTTACAAGTGCTTCAAGGAGAACAGAATATTCAAAGGACTTTCAAGTGGCTATTGATATTCTATTTTTTTGATGTTCTATACCCAAGTAGGCATAGAGTTCAAGTCATTGAAACTATAAGATTCTTCTATTAGATAGTGAAGAATCATGGAGTTCAGGTCACTGAAGCTATGCGATTCTTCTATTAGCACTACTACAAAATAGGGAATAGAAAACACTGAATAGAGGACGGTTAAGTTTGATAAGTGTTGTATAGGTGTATAGAGAACGCATTTCTCTCATAACAGTTGTGTGAAAAAAAGAATAGAGGACAGTTACCTTACCTAACCGTCTTATATTATTTACCATAATAATAAAAAAATATAAAATATAAAATAATTAATAAAATATAAAACTGTTCTCAAGATAACCATTTAACCTTAATTTAACCAAATCAAATATTTTTTAAAAAATAAAATACCAAAGCAATTAAAGTTTTATGAGTTAGGCGGCAGAACATGAATTCCTAAAACTTTTAACTGGGTTAGGCGCGCATAAAAATTCATCAGAACCCTCAGAAAACCCCCCAACTCTGCTCGCAAGAAAACCGAAACCTCTTCACCGCCGCTCTTCACTGCCGCTTCTCACTCTGCACCGCCTCTCCCTTGCGCCTCTTTCCGGCCGCCTCCCAACCTCCGGTAAAACTCGCAGAAAGCCACTCCAAACTCTACTCGCAAGAAAACCCGCAAAACTCACTGCTGCTCCTCACTCTGCGCCGCCGCTCCCTTGTACCTCTTTCCGGCCGCATCTCAACCTCCCGTAAAACCCGGTTGCCCCACCGCTGCAATCAATTCCACGGTTAGTGTGCTTAATTATGTTTTTCATACGATTTTATTCAACCTATAACCTAGGGATTATGAATATTTGTAATTATCTAATTGTAATATATAATTAAAGAATTCAGTTTGTTAATTGCTGAACGCCTGAACCTCGATGGAGCGAATGTAAACGTTAATGGAGGAGCTATAGCGCTTGGATATCCTTTCGGAGCTACATGTATGCAATTTTGCTTCTTGATAAACACTTTTGTGGGTGAGTTAGGCCTGTCCTCTTCAATTTATAACAAATATACTCCCATCCAGTAAAAATCTGTTTTAATATGTTCAAAATCGGTTTTAATTAGTAAAATCTGGTTTTATCAATCAGCAAAAATCAATTACAATTTGTAAATTTTGGGTTTTATCAATTTGCCGAAATCAGACTTTATTCAGTGAAAATCACTTTTTTTCCAGTAAAAATAAGGATTACAAGAACAAGGCCTTAATGATTAGTATATTGATAGTTGTTTCTGTTTGAATGGTTATTTAGATCCTACTTCATTCTTTTCTCAGGTGCCCTGTGTGAAATTAAACATCGAGGAAGAGATTGCCGATTTGGAGTCGTTTCCATGTTTATAGGTCTCTCTCTCCCTGCCTTCTGAACTCCTCTCTTTCATCATATAATGTGTGCAATTAAACGGAATTGTGAACCCTTAAAATCTGTTAACTGGAATCTGTAAAGCTGAAGCTACTAAGTTTCAAATATTATCCCATAATATATAACTGATATATTTTTTTATAACATTCTCTCATAAACTGTGTACTGAACACCGTAGTATAGAAATGTTAATTTACAGACTTACCAATGTATACCAAATGCACTATTGAAATTGGTAAGTACCCACACAGCTATCTTACCAGGTGCCTCTCCCTGGACAGGGGGGACTACTTTAAAGATCTGTACTACCAGTTCTGAACTTGCAGGAAGGGGTAAGAGTGCTTCAATTGTTTTTAAAAGAGGTGATCGTGTAGGCGAATTAACTACCTAACACCTGTTAACTGGAATCTGTAAAGCTGAAGCTTCGGTTGTAATGAAGGTTTCCAACTAAGAGGGTGAAGGAGGCACGTGAGAGGATGAAATTGCTGGTTGTTTTTAATATTTATAAATAAAACATGTGTTTAGTTATAATTGAGTAAGTTTCAGGCTGTAACCCAATTTAGTTGGTTCTGTGGCATGCGTAACTGAAATTGTTATTCATGGGTATAATAGCTATTTGAATCCTGCAATCCTATGTAAATGATTCTCTGTCTAAGAAGTCTGGAGGCTGTGTTTTTGCGCTTCAAGATGAACAGCTGCAGGCCACCCAACAGTACACGCAAAGCACCAGAACCACAATCTTGATGGTCGTTCAATCCACCGTCCTGTTTAGCTAGCGGTACCTCTTTCTAAACATTTTAACCTTCTGAAAAAAGGAATGAAAGCGTCATTAGTAACTCCTCTGAGGGATCCATATTTCGCAAGTAGATGAGGAAACATGATCAGATGACTGCTGCATCTTAGTGCGTCTTAGATGAATGGAGATACTTGGTTTGTTCCGCTGAGTCATAGTTCTCTTTTGTCATATCATAGTTGATGGTGCTTTGTGATGCTGCTACTGAAATTATTTATAATAAATAAATTTTTATGTGTTAGACCTAGCAGATGATCACATCATCTACAAGTTAGATTTTACAGTGTTCGGTCAATTGCTTGTGCAGGTTTCTCTACTTTTTGCAGAAAGGTACCGGCTGTCTGAACTTTCTCTTGGAACTGATTCTCAATGTATAATATTCATTTTACAGCTACATCAAAATGGTTTACTCGGAGGAGATGACATAACAGACCGCTTCTTCCGGGTTCTTTGGTGAATGTTATTTCCATTTTAGAGTTTTGGTTTAATATTTATTTATTATTGTATTTAGTACCATATGCATAATTGATCTTGTGTTCCAGGAAATCTTTGTGTCACATTTTGGTGAGGTGATGCAATACACTCCACCCCAAGTGCAGTCCTTCCTCGCCATTGATATTTACGCTAAATCAGTATATTCAATCTTGAAGATATTTTTGCTTTTCCCTTGCGATTTTCTCTTACTGTATTGCACTGTCTTTAACTTCAAATCTTGTTGTTTTTGTAGCATTCTCCAGTGGATCAAAGATCAAGCAAACTCTTTCTCTTACCAAAGGTTGGATTCTAAACTTTGGTTGTTAGACTTTGGATCGTTAGAATCTGTGCATGAAGGTGTTAATTTCCAAGTACATCTTGGTTGCCACTGTAATCAGCTCCCCTCCGCTGCGAGCATTTACTGCTCACTCTATTGATACTTTTTCCTGTTTTGGTTAACGGTGGTTTGTTTTTCCAGGTTTTGTCAGCTTTTGCAAATGCATTCCATGCCTTGCAGCCTCTTAAAAGTACCTGCTTTCAGGTTAGAAATGTTTGATAGTTTGGTTATTTCGAAACCTTGGCTGTCTTTATGCCACTTTGTTACTGCAGTCTTTGATCTTGTGAGCATCAGAATATCAGATATACCGATATGGTGAATCTAAGTATAAAATCTTTTTCATTCTCGGTGATTTAAGGTAATCTGTGGCATTTTAATCATCAGTTCTTTTCTTGACATTAGCATTCTAAGGTTGGCTGTGTAAACCAATTATGTACCTGGTTTCAGTCAGTAATTTGGTCTTTAAGGTTATATTACTTGATTTATTTAGAGCATGCTTGGATGCCTGTTGTGATGTTGTTATCATTTACCAGACACTGATCAATGAAAGTTGTCCAGTCTTGAATGTTGATTGTCTTTAAACTAAGAACTACTTTGTTTGATGTCATGGGGTAGTTTTGAAATGTGAAACCAATATTTTTTCTGAATATTCTGGCGGTAAATATTTATCATCTCGGTTTGGCTTTATCAAAGGCTTTGTCCTCTCTCTGTCTCTCTTTACTTTTTCCTTTTTTTAAGGACAATTACAGTTTGCAAATGACATTCAGGGGTATATTTAGTCACAAATGAAGATAATATTTTACAGTAAGGTCAGTAACAGGCATGAGTTAAAAAGGTTGGTTCAGTAGTCTGATATTGAATTAGACATTCGGGAACCTCTCTGGATTTTGTTTTTGTTTTTTTGTCTAAATAGAAATTACTTTTAAAAAGAATGGAGCAATTAGTAGTACTCTTAATGCATACTGATCCTTGTTATAAACTTTTGTTGTGGTTTTTCTAGGTTAGACTTGTTATTGTCTCCTTGGCCCCTCTATCTATCTTTCCACCCCTGGTGCGATTGGGATAATAAAAGGGTTGGGTCTGAGCTCTGAGGGGACACCCTTACCTTGTTTATATTAGCCTTTTCAACCTTTCTTCTTCTCATTCACGGCATAATGTGAAGGCCAGTTTCGTTGCATTATGGCTCAAATTATCCAGCTCAAAGCTTTTATTAAAGTCCGGCATTTTATTCTGCAGAAGATTCTAAAGATAGAAGGAAGGATCTAGGGCACCGCCTCACCGAAGCCTTAAAGCTTGTATTGCTGATTGGTATATGCCCTATTTAGTTGCAGAAGAGTTACATTGTAATTTTCTGTTGTTTTTTTTGTTCATTTTCGTGATTGAAGGATGCGCATCATGCTCTCGAGTGTAGGATTTAAGCGTAGAGTATTTATTTCGACAACTGCAATGAAAACTCCAAAGTAACTAGTTTAATTTTAGTTTGCCTTCTGCCAGGTTATGGGAAAAATTCATGCAGTCCTCTCTGATGGACCAGTACCGTACGTAGTGAAAAATGTTGAGGTCATTTTGACTGTATTACTGATTTTTAGTTATTCAGTTAGGTTAATAAAACACCCGTTGTTTAGGCATTTAGTTGTGCAAACTTAATGGGTTGAGTATGATTTAAACTTCTTGGGGTTTCGAAGTAGCAGGGCTAGTTTCTTTTCTAGTCTAAGAATTCAACTATGATGTGTATTAGTATTTGTGTACTCCTGCAGCTGTAGCACTAGCATTAAACTCCTTTGTCATGATACTCACACAGGTAATAGAGAGGAGAGATGCGCTGAATGAAACCACAGAAGCTCAGCTCCTCAAGAAGATCGAGACCACTGAACACACACTGGCAGCATCAACTGCGGCGCTTGAGCAAGAAGAATTTCAGGGAATATATTCCGGAGTGCAAGCTGAAGTGCTGCTGCTCCTACTAATGTGCAGCTGGCTCATTCAAGAACACCACGAGCTGATTTTCTTTGCTTGATTACTTAACCTGTACGAAAAAAGGGAAGGGTATTGCCTGATTTATTTTTTTTCCCTTTCCATTTTGTAAACACATTAGAGTAACTTGTAAAATGTACGTTATTTTTTAATATATTTAATGCTTGTTTATGCAAAAAAATACGTATATATATTTTTTTAAAAAATGGTGGAATAGAGGACGCTTATCTAAGAAAACCGTCCTCTATGTCTATGTAAAAAAAGGAAGAATAGAGTACGCC

mRNA sequence

ATGCGTGTGTGCGTGTGTGCTATGCGATGGGCGAGGGCGACGATGCAAGGCACGAGTGACGAGCAAGACGCGTGTGGGCATCGATGCTGCCGCGCCACAGCGCGCCTGGCTCGCCCAGCCAGTAAGCAGAACGCGCGAGCAGGGAGCGATCCTTCGCTCGCCGCGCGCTGGCCTGCGCAGCAACACGCGGCACAGTACAAGGCTGCGCGCAGCGTGGCCAGCTGTGGCGTGTCGCTGTGTGTGCTTTGTGCTACGATCAATCGAACGGGGCGCGAGCCTCGTAGCTTGATGGGGCTTGGGCGCAAGCCCAAGTGCCTCGTCTCGCGACGATTGGCGCGCATAAAAATTCATCAGAACCCTCAGAAAACCCCCCAACTCTGCTCGCAAGAAAACCGAAACCTCTTCACCGCCGCTCTTCACTGCCGCTTCTCACTCTGCACCGCCTCTCCCTTGCGCCTCTTTCCGGCCGCCTCCCAACCTCCGGTAAAACTCGCAGAAAGCCACTCCAAACTCTACTCGCAAGAAAACCCGCAAAACTCACTGCTGCTCCTCACTCTGCGCCGCCGCTCCCTTGTACCTCTTTCCGGCCGCATCTCAACCTCCCGTAAAACCCGGTTGCCCCACCGCTGCAATCAATTCCACGAATTCAGTTTGTTAATTGCTGAACGCCTGAACCTCGATGGAGCGAATGTAAACGTTAATGGAGGAGCTATAGCGCTTGGATATCCTTTCGGAGCTACATGTATGCAATTTTGCTTCTTGATAAACACTTTTGTGGGTGCCCTGTGTGAAATTAAACATCGAGGAAGAGATTGCCGATTTGGAGTCGTTTCCATGTTTATAGAAAGGTACCGGCTGTCTGAACTTTCTCTTGGAACTGATTCTCAATGTATAATATTCATTTTACAGCTACATCAAAATGGTTTACTCGGAGGAGATGACATAACAGACCGCTTCTTCCGGGTTCTTTGTACCATATGCATAATTGATCTTGTGTTCCAGGAAATCTTTGTGTCACATTTTGGTGAGGTGATGCAATACACTCCACCCCAAGTGCAGTCCTTCCTCGCCATTGATATTTACGCTAAATCACATTCTCCAGTGGATCAAAGATCAAGCAAACTCTTTCTCTTACCAAAGGTTTTGTCAGCTTTTGCAAATGCATTCCATGCCTTGCAGCCTCTTAAAAGTACCTGCTTTCAGAAGATTCTAAAGATAGAAGGAAGGATCTAGGGCACCGCCTCACCGAAGCCTTAAAGCTTGTATTGCTGATTGGTAATAGAGAGGAGAGATGCGCTGAATGAAACCACAGAAGCTCAGCTCCTCAAGAAGATCGAGACCACTGAACACACACTGGCAGCATCAACTGCGGCGCTTGAGCAAGAAGAATTTCAGGGAATATATTCCGGAGTGCAAGCTGAAGTGCTGCTGCTCCTACTAATGTGCAGCTGGCTCATTCAAGAACACCACGAGCTGATTTTCTTTGCTTGATTACTTAACCTGTACGAAAAAAGGGAAGGGTATTGCCTGATTTATTTTTTTTCCCTTTCCATTTTGTAAACACATTAGAGTAACTTGTAAAATGTACGTTATTTTTTAATATATTTAATGCTTGTTTATGCAAAAAAATACGTATATATATTTTTTTAAAAAATGGTGGAATAGAGGACGCTTATCTAAGAAAACCGTCCTCTATGTCTATGTAAAAAAAGGAAGAATAGAGTACGCC

Coding sequence (CDS)

ATGCGTGTGTGCGTGTGTGCTATGCGATGGGCGAGGGCGACGATGCAAGGCACGAGTGACGAGCAAGACGCGTGTGGGCATCGATGCTGCCGCGCCACAGCGCGCCTGGCTCGCCCAGCCAGTAAGCAGAACGCGCGAGCAGGGAGCGATCCTTCGCTCGCCGCGCGCTGGCCTGCGCAGCAACACGCGGCACAGTACAAGGCTGCGCGCAGCGTGGCCAGCTGTGGCGTGTCGCTGTGTGTGCTTTGTGCTACGATCAATCGAACGGGGCGCGAGCCTCGTAGCTTGATGGGGCTTGGGCGCAAGCCCAAGTGCCTCGTCTCGCGACGATTGGCGCGCATAAAAATTCATCAGAACCCTCAGAAAACCCCCCAACTCTGCTCGCAAGAAAACCGAAACCTCTTCACCGCCGCTCTTCACTGCCGCTTCTCACTCTGCACCGCCTCTCCCTTGCGCCTCTTTCCGGCCGCCTCCCAACCTCCGGTAAAACTCGCAGAAAGCCACTCCAAACTCTACTCGCAAGAAAACCCGCAAAACTCACTGCTGCTCCTCACTCTGCGCCGCCGCTCCCTTGTACCTCTTTCCGGCCGCATCTCAACCTCCCGTAAAACCCGGTTGCCCCACCGCTGCAATCAATTCCACGAATTCAGTTTGTTAATTGCTGAACGCCTGAACCTCGATGGAGCGAATGTAAACGTTAATGGAGGAGCTATAGCGCTTGGATATCCTTTCGGAGCTACATGTATGCAATTTTGCTTCTTGATAAACACTTTTGTGGGTGCCCTGTGTGAAATTAAACATCGAGGAAGAGATTGCCGATTTGGAGTCGTTTCCATGTTTATAGAAAGGTACCGGCTGTCTGAACTTTCTCTTGGAACTGATTCTCAATGTATAATATTCATTTTACAGCTACATCAAAATGGTTTACTCGGAGGAGATGACATAACAGACCGCTTCTTCCGGGTTCTTTGTACCATATGCATAATTGATCTTGTGTTCCAGGAAATCTTTGTGTCACATTTTGGTGAGGTGATGCAATACACTCCACCCCAAGTGCAGTCCTTCCTCGCCATTGATATTTACGCTAAATCACATTCTCCAGTGGATCAAAGATCAAGCAAACTCTTTCTCTTACCAAAGGTTTTGTCAGCTTTTGCAAATGCATTCCATGCCTTGCAGCCTCTTAAAAGTACCTGCTTTCAGAAGATTCTAAAGATAGAAGGAAGGATCTAG

Protein sequence

MRVCVCAMRWARATMQGTSDEQDACGHRCCRATARLARPASKQNARAGSDPSLAARWPAQQHAAQYKAARSVASCGVSLCVLCATINRTGREPRSLMGLGRKPKCLVSRRLARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKLYSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANVNVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFIERYRLSELSLGTDSQCIIFILQLHQNGLLGGDDITDRFFRVLCTICIIDLVFQEIFVSHFGEVMQYTPPQVQSFLAIDIYAKSHSPVDQRSSKLFLLPKVLSAFANAFHALQPLKSTCFQKILKIEGRI

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo20885.1	Spo20885.1	mRNA

Homology

[Close]

BLAST of Spo20885.1 vs. NCBI nr
Match: gi|902212284|gb|KNA16929.1| (hypothetical protein SOVF_084780 isoform B, partial [Spinacia oleracea])

HSP 1 Score: 345.9 bits (886), Expect = 9.700e-92
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1


		  
Query: 112 ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL 171
           ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL
Sbjct: 1   ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL 60

Query: 172 YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV 231
           YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV
Sbjct: 61  YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV 120

Query: 232 NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 282
           NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI
Sbjct: 121 NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 170

[Close]

BLAST of Spo20885.1 vs. NCBI nr
Match: gi|902212285|gb|KNA16930.1| (hypothetical protein SOVF_084780 isoform C, partial [Spinacia oleracea])

HSP 1 Score: 345.9 bits (886), Expect = 9.700e-92
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1


		  
Query: 112 ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL 171
           ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL
Sbjct: 1   ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL 60

Query: 172 YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV 231
           YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV
Sbjct: 61  YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV 120

Query: 232 NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 282
           NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI
Sbjct: 121 NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 170

[Close]

BLAST of Spo20885.1 vs. NCBI nr
Match: gi|902232712|gb|KNA22768.1| (hypothetical protein SOVF_031520 isoform B [Spinacia oleracea])

HSP 1 Score: 134.0 bits (336), Expect = 5.800e-28
Identity = 75/111 (67.57%), Postives = 79/111 (71.17%), Query Frame = 1


		  
Query: 279  MFIERYRLSELSLGTDSQCIIFILQLHQNGLLGGDDITDRFFRVLCTICIIDLVFQEIFV 338
            +F E YRLSEL LGTD+QCI FILQLHQNGLL GDDITDRFFRVL           EI V
Sbjct: 1857 LFAEWYRLSELPLGTDAQCIRFILQLHQNGLLRGDDITDRFFRVLL----------EISV 1916

Query: 339  SHFGEVMQYTPPQVQSFLAIDIYAK------SHSPVDQRSSKLFLLPKVLS 384
            SHFGEVMQ TP    SFLAIDIYAK       H PVDQ S KLFLLPK+L+
Sbjct: 1917 SHFGEVMQSTPQVQSSFLAIDIYAKLVYSILKHCPVDQGSGKLFLLPKILT 1957

[Close]

BLAST of Spo20885.1 vs. NCBI nr
Match: gi|902232711|gb|KNA22767.1| (hypothetical protein SOVF_031520 isoform A [Spinacia oleracea])

HSP 1 Score: 134.0 bits (336), Expect = 5.800e-28
Identity = 75/111 (67.57%), Postives = 79/111 (71.17%), Query Frame = 1


		  
Query: 279  MFIERYRLSELSLGTDSQCIIFILQLHQNGLLGGDDITDRFFRVLCTICIIDLVFQEIFV 338
            +F E YRLSEL LGTD+QCI FILQLHQNGLL GDDITDRFFRVL           EI V
Sbjct: 1856 LFAEWYRLSELPLGTDAQCIRFILQLHQNGLLRGDDITDRFFRVLL----------EISV 1915

Query: 339  SHFGEVMQYTPPQVQSFLAIDIYAK------SHSPVDQRSSKLFLLPKVLS 384
            SHFGEVMQ TP    SFLAIDIYAK       H PVDQ S KLFLLPK+L+
Sbjct: 1916 SHFGEVMQSTPQVQSSFLAIDIYAKLVYSILKHCPVDQGSGKLFLLPKILT 1956

[Close]

BLAST of Spo20885.1 vs. NCBI nr
Match: gi|731361028|ref|XP_010692136.1| (PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 117.5 bits (293), Expect = 5.600e-23
Identity = 81/185 (43.78%), Postives = 92/185 (49.73%), Query Frame = 1


		  
Query: 276  VVSMFIERYRLSELSLGTDSQCIIFILQLHQNGLLGGDDITDRFFRVLCTICIIDLVFQE 335
            V  +F E Y++ E+S G D+ C+ F+LQLHQ+GLL GDDITDRFFRVL           E
Sbjct: 1860 VSPLFAEWYQICEVSSGFDNACMRFVLQLHQSGLLRGDDITDRFFRVLL----------E 1919

Query: 336  IFVSHFGEVMQYTPPQ-----VQSFLAIDIYAK------SHSPVDQRSSKLFLLPK---- 395
            I VSHFGEV+Q +P Q       SFLAID YAK       H PVDQ +SKLFLLPK    
Sbjct: 1920 ISVSHFGEVVQQSPKQPPHLIQTSFLAIDSYAKLVYSILKHCPVDQGTSKLFLLPKILVV 1979

Query: 396  ---------------------------------------------VLSAFANAFHALQPL 401
                                                         VLSAFANAFHALQPL
Sbjct: 1980 TVRSIQKDADEKKEEFNPRPYYRLFINWLLDFGSLDPVHDGINFQVLSAFANAFHALQPL 2034

[Close]

BLAST of Spo20885.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RD55_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_084780 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 6.700e-92
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1


		  
Query: 112 ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL 171
           ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL
Sbjct: 1   ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL 60

Query: 172 YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV 231
           YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV
Sbjct: 61  YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV 120

Query: 232 NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 282
           NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI
Sbjct: 121 NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 170

[Close]

BLAST of Spo20885.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBR8_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_084780 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 6.700e-92
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1


		  
Query: 112 ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL 171
           ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL
Sbjct: 1   ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL 60

Query: 172 YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV 231
           YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV
Sbjct: 61  YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV 120

Query: 232 NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 282
           NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI
Sbjct: 121 NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 170

[Close]

BLAST of Spo20885.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RTI4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_031520 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 4.000e-28
Identity = 75/111 (67.57%), Postives = 79/111 (71.17%), Query Frame = 1


		  
Query: 279  MFIERYRLSELSLGTDSQCIIFILQLHQNGLLGGDDITDRFFRVLCTICIIDLVFQEIFV 338
            +F E YRLSEL LGTD+QCI FILQLHQNGLL GDDITDRFFRVL           EI V
Sbjct: 1857 LFAEWYRLSELPLGTDAQCIRFILQLHQNGLLRGDDITDRFFRVLL----------EISV 1916

Query: 339  SHFGEVMQYTPPQVQSFLAIDIYAK------SHSPVDQRSSKLFLLPKVLS 384
            SHFGEVMQ TP    SFLAIDIYAK       H PVDQ S KLFLLPK+L+
Sbjct: 1917 SHFGEVMQSTPQVQSSFLAIDIYAKLVYSILKHCPVDQGSGKLFLLPKILT 1957

[Close]

BLAST of Spo20885.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RVB2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_031520 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 4.000e-28
Identity = 75/111 (67.57%), Postives = 79/111 (71.17%), Query Frame = 1


		  
Query: 279  MFIERYRLSELSLGTDSQCIIFILQLHQNGLLGGDDITDRFFRVLCTICIIDLVFQEIFV 338
            +F E YRLSEL LGTD+QCI FILQLHQNGLL GDDITDRFFRVL           EI V
Sbjct: 1856 LFAEWYRLSELPLGTDAQCIRFILQLHQNGLLRGDDITDRFFRVLL----------EISV 1915

Query: 339  SHFGEVMQYTPPQVQSFLAIDIYAK------SHSPVDQRSSKLFLLPKVLS 384
            SHFGEVMQ TP    SFLAIDIYAK       H PVDQ S KLFLLPK+L+
Sbjct: 1916 SHFGEVMQSTPQVQSSFLAIDIYAKLVYSILKHCPVDQGSGKLFLLPKILT 1956

[Close]

BLAST of Spo20885.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BGB8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g018420 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.900e-23
Identity = 81/185 (43.78%), Postives = 92/185 (49.73%), Query Frame = 1


		  
Query: 276  VVSMFIERYRLSELSLGTDSQCIIFILQLHQNGLLGGDDITDRFFRVLCTICIIDLVFQE 335
            V  +F E Y++ E+S G D+ C+ F+LQLHQ+GLL GDDITDRFFRVL           E
Sbjct: 1859 VSPLFAEWYQICEVSSGFDNACMRFVLQLHQSGLLRGDDITDRFFRVLL----------E 1918

Query: 336  IFVSHFGEVMQYTPPQ-----VQSFLAIDIYAK------SHSPVDQRSSKLFLLPK---- 395
            I VSHFGEV+Q +P Q       SFLAID YAK       H PVDQ +SKLFLLPK    
Sbjct: 1919 ISVSHFGEVVQQSPKQPPHLIQTSFLAIDSYAKLVYSILKHCPVDQGTSKLFLLPKILVV 1978

Query: 396  ---------------------------------------------VLSAFANAFHALQPL 401
                                                         VLSAFANAFHALQPL
Sbjct: 1979 TVRSIQKDADEKKEEFNPRPYYRLFINWLLDFGSLDPVHDGINFQVLSAFANAFHALQPL 2033

[Close]

BLAST of Spo20885.1 vs. ExPASy Swiss-Prot
Match: THIK1_ARATH (3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana GN=KAT1 PE=2 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 6.600e-8
Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 1


		  
Query: 223 RLNLDGANVNVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 282
           +L LD   +NVNGGAIA+G+P GAT  +    +      L E+K RG+DCRFGVVSM I
Sbjct: 366 KLGLDAEKINVNGGAIAIGHPLGATGARCVATL------LHEMKRRGKDCRFGVVSMCI 418

[Close]

BLAST of Spo20885.1 vs. ExPASy Swiss-Prot
Match: THIK5_ARATH (3-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidopsis thaliana GN=KAT5 PE=2 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 1.100e-7
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 1


		  
Query: 222 ERLNLDGANVNVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 281
           ++L LD   VNVNGGAIA+G+P GAT  +    +      L E+K RG+DCRFGV+SM I
Sbjct: 374 KKLELDMEKVNVNGGAIAIGHPLGATGARCVATL------LHEMKRRGKDCRFGVISMCI 427

[Close]

BLAST of Spo20885.1 vs. ExPASy Swiss-Prot
Match: THIK2_ARATH (3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 2.500e-7
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 1


		  
Query: 223 RLNLDGANVNVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 282
           +L LD   +NVNGGA+A+G+P GAT  +    +      L E+K RG+DCRFGVVSM I
Sbjct: 374 KLGLDPEKINVNGGAMAIGHPLGATGARCVATL------LHEMKRRGKDCRFGVVSMCI 426

[Close]

BLAST of Spo20885.1 vs. TAIR (Arabidopsis)
Match: AT1G02080.1 (transcription regulators)

HSP 1 Score: 72.8 bits (177), Expect = 5.600e-13
Identity = 42/114 (36.84%), Postives = 63/114 (55.26%), Query Frame = 1


		  
Query: 276  VVSMFIERYRLSELSLGTDSQCIIFILQLHQNGLLGGDDITDRFFRVLCTICIIDLVFQE 335
            V ++F   Y++ EL    ++ C  ++L LHQ GLL GDD T+ FFR+L  + +   +  E
Sbjct: 1907 VSTLFKNWYQICELPGANETACSQYVLHLHQTGLLKGDDTTESFFRILLELSVAHCISSE 1966

Query: 336  IFVSHFGEVMQYTPPQVQSFLAIDIYAK------SHSPVDQRSSKLFLLPKVLS 384
               S  G V     PQ  SFL ID+YAK       + P  + SS+LFLL ++++
Sbjct: 1967 DINS--GAVQSPQQPQSPSFLIIDMYAKLVFSILKYFPEQESSSRLFLLSEIMA 2018

[Close]

BLAST of Spo20885.1 vs. TAIR (Arabidopsis)
Match: AT1G04710.1 (peroxisomal 3-ketoacyl-CoA thiolase 4)

HSP 1 Score: 60.1 bits (144), Expect = 3.700e-9
Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 1


		  
Query: 223 RLNLDGANVNVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 282
           +L LD   +NVNGGAIA+G+P GAT  +    +      L E+K RG+DCRFGVVSM I
Sbjct: 366 KLGLDAEKINVNGGAIAIGHPLGATGARCVATL------LHEMKRRGKDCRFGVVSMCI 418

[Close]

BLAST of Spo20885.1 vs. TAIR (Arabidopsis)
Match: AT5G48880.2 (peroxisomal 3-keto-acyl-CoA thiolase 2)

HSP 1 Score: 59.3 bits (142), Expect = 6.400e-9
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 1


		  
Query: 222 ERLNLDGANVNVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 281
           ++L LD   VNVNGGAIA+G+P GAT  +    +      L E+K RG+DCRFGV+SM I
Sbjct: 374 KKLELDMEKVNVNGGAIAIGHPLGATGARCVATL------LHEMKRRGKDCRFGVISMCI 427

[Close]

BLAST of Spo20885.1 vs. TAIR (Arabidopsis)
Match: AT2G33150.1 (peroxisomal 3-ketoacyl-CoA thiolase 3)

HSP 1 Score: 58.2 bits (139), Expect = 1.400e-8
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 1


		  
Query: 223 RLNLDGANVNVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 282
           +L LD   +NVNGGA+A+G+P GAT  +    +      L E+K RG+DCRFGVVSM I
Sbjct: 374 KLGLDPEKINVNGGAMAIGHPLGATGARCVATL------LHEMKRRGKDCRFGVVSMCI 426

The following BLAST results are available for this feature:

BLAST of Spo20885.1 vs. NCBI nr
BLAST of Spo20885.1 vs. UniProtKB/TrEMBL
BLAST of Spo20885.1 vs. ExPASy Swiss-Prot
BLAST of Spo20885.1 vs. TAIR (Arabidopsis)

BLAST of Spo20885.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902212284\|gb\|KNA16929.1\|	9.7e-92	100.	hypothetical protein SOVF_0847...	[more]
gi\|902212285\|gb\|KNA16930.1\|	9.7e-92	100.	hypothetical protein SOVF_0847...	[more]
gi\|902232712\|gb\|KNA22768.1\|	5.8e-28	67.5	hypothetical protein SOVF_0315...	[more]
gi\|902232711\|gb\|KNA22767.1\|	5.8e-28	67.5	hypothetical protein SOVF_0315...	[more]
gi\|731361028\|ref\|XP_010692136.1\|	5.6e-23	43.7	PREDICTED: CCR4-NOT transcript...	[more]

BLAST of Spo20885.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RD55_SPIOL	6.7e-92	100.	Uncharacterized protein (Fragm...	[more]
A0A0K9RBR8_SPIOL	6.7e-92	100.	Uncharacterized protein (Fragm...	[more]
A0A0K9RTI4_SPIOL	4.0e-28	67.5	Uncharacterized protein OS=Spi...	[more]
A0A0K9RVB2_SPIOL	4.0e-28	67.5	Uncharacterized protein OS=Spi...	[more]
A0A0J8BGB8_BETVU	3.9e-23	43.7	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo20885.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3


Match Name	E-value	Identity	Description
THIK1_ARATH	6.6e-8	52.5	3-ketoacyl-CoA thiolase 1, per...	[more]
THIK5_ARATH	1.1e-7	51.6	3-ketoacyl-CoA thiolase 5, per...	[more]
THIK2_ARATH	2.5e-7	50.8	3-ketoacyl-CoA thiolase 2, per...	[more]

BLAST of Spo20885.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4


Match Name	E-value	Identity	Description
AT1G02080.1	5.6e-13	36.8	transcription regulators	[more]
AT1G04710.1	3.7e-9	52.5	peroxisomal 3-ketoacyl-CoA thi...	[more]
AT5G48880.2	6.4e-9	51.6	peroxisomal 3-keto-acyl-CoA th...	[more]
AT2G33150.1	1.4e-8	50.8	peroxisomal 3-ketoacyl-CoA thi...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016039	Thiolase-like	GENE3D	3.40.47.10		coord: 213..251 score: 3.
IPR016039	Thiolase-like	unknown	SSF53901	Thiolase-like	coord: 214..252 score: 1.3
IPR020617	Thiolase, C-terminal	PFAM	PF02803	Thiolase_C	coord: 213..252 score: 3.
None	No IPR available	PANTHER	PTHR13162	CCR4-NOT TRANSCRIPTION COMPLEX	coord: 279..390 score: 1.1
None	No IPR available	PANTHER	PTHR13162:SF8	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1	coord: 279..390 score: 1.1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016020	membrane
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo17436	0.67	Barchart \| Table
Spo22525	0.66	Barchart \| Table
Spo08767	0.65	Barchart \| Table