Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGGGTTATTGGGTAGAAAGTCGTTTCCACCTGGGTTTCGATTTCACCCCACAGACGAAGAACTCTTCATGTTTTACTTGAAGAGAAAAGTAATGGGTAAATCATTAGGTCCTCAGATGATAGCTGAGGTTGATGTGTATAGGTTTGCCCCCTGGGATCTCCCATCAATGGCGTGTCTGAAAACAAGGGACCTGAATTGGTACTTCTTCTGCCCTCGAGCGAAGAAATACCCTAACGGAGGTAGAGCCAATAGGGCTACTGAATGGGGATATTGGAAGTCAACGGGGAATGACCGGACTGTGATGTATTCTTCCCGTCCCGTCGGGAAGATCAAGACTCTGGTGTTCCACAGAGGGAAGGCTCCGAAAGGGGAACGGACTGATTGGGTGATGCATGAGTTTAGGCTCGAAGATAAGCTCCTTACCGAAAAGGGTGTCCCTCAGGAATCTTATGTGATCTGTAAGGTGTTTGAGAAGAGTGGTTTAGGGCCGAAGAATGGGGAGAGTTATGGAGCTCGATTTGTGGAAGAAGAATGGGATAGTGATGATGATGATAATGCGCAGGAGACAGATTACGGTCTTGTGGTGCATGATACGGGTTGTGGGCGTGGTGGTGATAGCCCCGATGTTTCAGTTTTAACCTCATCTTTGGGTGCTCCGAATGTTACTTCTTCGGTTCATACTCCGATTCCCCTAGCTGTTTGTGCTGCTGCTAATGCAGCATCTCCAAACTCTGCTGCTACTAATGCAGCATCTCCAAACTCTGCTGCTACTAATGCAGCATCTCCTACCTCTACTGTTACTAATCTGGTATCTGCTACCTCTGCTGCTGCTTTTATGGGTGATCCATTCACTACTGCTGCTTCTATGGGTACTCATTACGTTACTGATCTTTCTATGGATATGCAAAATGCTGCTCCTGCTTCTGTGAGTATGCTAAATGTTGATGATTGTTCCGGTTCTGGTTCTGGTTCGGGTTCGGGTCTGCTAAATGTTGCTGATTGTTCTGGTTTGGGTTCTGGTCTTGCTATTGATGCAATGACAGAAGAAGACGTGGACAGGTTGTTGATGCATTTTACTGAGAACGATGAAGCTACTGGCGATATTTACAGTGGATTGGGGGATTTGTTTGATCCTTCTGCCCTGAATATTGATTGGAGCGATTTGGCTGATCCTTCTGCTGCCGAGAATGGCGATTGGGGTGATTGTTTCATTGAGATGAACGATCTAAACTGA ATGAAAGGGTTATTGGGTAGAAAGTCGTTTCCACCTGGGTTTCGATTTCACCCCACAGACGAAGAACTCTTCATGTTTTACTTGAAGAGAAAAGTAATGGGTAAATCATTAGGTCCTCAGATGATAGCTGAGGTTGATGTGTATAGGTTTGCCCCCTGGGATCTCCCATCAATGGCGTGTCTGAAAACAAGGGACCTGAATTGGTACTTCTTCTGCCCTCGAGCGAAGAAATACCCTAACGGAGGTAGAGCCAATAGGGCTACTGAATGGGGATATTGGAAGTCAACGGGGAATGACCGGACTGTGATGTATTCTTCCCGTCCCGTCGGGAAGATCAAGACTCTGGTGTTCCACAGAGGGAAGGCTCCGAAAGGGGAACGGACTGATTGGGTGATGCATGAGTTTAGGCTCGAAGATAAGCTCCTTACCGAAAAGGGTGTCCCTCAGGAATCTTATGTGATCTGTAAGGTGTTTGAGAAGAGTGGTTTAGGGCCGAAGAATGGGGAGAGTTATGGAGCTCGATTTGTGGAAGAAGAATGGGATAGTGATGATGATGATAATGCGCAGGAGACAGATTACGGTCTTGTGGTGCATGATACGGGTTGTGGGCGTGGTGGTGATAGCCCCGATGTTTCAGTTTTAACCTCATCTTTGGGTGCTCCGAATGTTACTTCTTCGGTTCATACTCCGATTCCCCTAGCTGTTTGTGCTGCTGCTAATGCAGCATCTCCAAACTCTGCTGCTACTAATGCAGCATCTCCAAACTCTGCTGCTACTAATGCAGCATCTCCTACCTCTACTGTTACTAATCTGGTATCTGCTACCTCTGCTGCTGCTTTTATGGGTGATCCATTCACTACTGCTGCTTCTATGGGTACTCATTACGTTACTGATCTTTCTATGGATATGCAAAATGCTGCTCCTGCTTCTGTGAGTATGCTAAATGTTGATGATTGTTCCGGTTCTGGTTCTGGTTCGGGTTCGGGTCTGCTAAATGTTGCTGATTGTTCTGGTTTGGGTTCTGGTCTTGCTATTGATGCAATGACAGAAGAAGACGTGGACAGGTTGTTGATGCATTTTACTGAGAACGATGAAGCTACTGGCGATATTTACAGTGGATTGGGGGATTTGTTTGATCCTTCTGCCCTGAATATTGATTGGAGCGATTTGGCTGATCCTTCTGCTGCCGAGAATGGCGATTGGGGTGATTGTTTCATTGAGATGAACGATCTAAACTGA ATGAAAGGGTTATTGGGTAGAAAGTCGTTTCCACCTGGGTTTCGATTTCACCCCACAGACGAAGAACTCTTCATGTTTTACTTGAAGAGAAAAGTAATGGGTAAATCATTAGGTCCTCAGATGATAGCTGAGGTTGATGTGTATAGGTTTGCCCCCTGGGATCTCCCATCAATGGCGTGTCTGAAAACAAGGGACCTGAATTGGTACTTCTTCTGCCCTCGAGCGAAGAAATACCCTAACGGAGGTAGAGCCAATAGGGCTACTGAATGGGGATATTGGAAGTCAACGGGGAATGACCGGACTGTGATGTATTCTTCCCGTCCCGTCGGGAAGATCAAGACTCTGGTGTTCCACAGAGGGAAGGCTCCGAAAGGGGAACGGACTGATTGGGTGATGCATGAGTTTAGGCTCGAAGATAAGCTCCTTACCGAAAAGGGTGTCCCTCAGGAATCTTATGTGATCTGTAAGGTGTTTGAGAAGAGTGGTTTAGGGCCGAAGAATGGGGAGAGTTATGGAGCTCGATTTGTGGAAGAAGAATGGGATAGTGATGATGATGATAATGCGCAGGAGACAGATTACGGTCTTGTGGTGCATGATACGGGTTGTGGGCGTGGTGGTGATAGCCCCGATGTTTCAGTTTTAACCTCATCTTTGGGTGCTCCGAATGTTACTTCTTCGGTTCATACTCCGATTCCCCTAGCTGTTTGTGCTGCTGCTAATGCAGCATCTCCAAACTCTGCTGCTACTAATGCAGCATCTCCAAACTCTGCTGCTACTAATGCAGCATCTCCTACCTCTACTGTTACTAATCTGGTATCTGCTACCTCTGCTGCTGCTTTTATGGGTGATCCATTCACTACTGCTGCTTCTATGGGTACTCATTACGTTACTGATCTTTCTATGGATATGCAAAATGCTGCTCCTGCTTCTGTGAGTATGCTAAATGTTGATGATTGTTCCGGTTCTGGTTCTGGTTCGGGTTCGGGTCTGCTAAATGTTGCTGATTGTTCTGGTTTGGGTTCTGGTCTTGCTATTGATGCAATGACAGAAGAAGACGTGGACAGGTTGTTGATGCATTTTACTGAGAACGATGAAGCTACTGGCGATATTTACAGTGGATTGGGGGATTTGTTTGATCCTTCTGCCCTGAATATTGATTGGAGCGATTTGGCTGATCCTTCTGCTGCCGAGAATGGCGATTGGGGTGATTGTTTCATTGAGATGAACGATCTAAACTGA MKGLLGRKSFPPGFRFHPTDEELFMFYLKRKVMGKSLGPQMIAEVDVYRFAPWDLPSMACLKTRDLNWYFFCPRAKKYPNGGRANRATEWGYWKSTGNDRTVMYSSRPVGKIKTLVFHRGKAPKGERTDWVMHEFRLEDKLLTEKGVPQESYVICKVFEKSGLGPKNGESYGARFVEEEWDSDDDDNAQETDYGLVVHDTGCGRGGDSPDVSVLTSSLGAPNVTSSVHTPIPLAVCAAANAASPNSAATNAASPNSAATNAASPTSTVTNLVSATSAAAFMGDPFTTAASMGTHYVTDLSMDMQNAAPASVSMLNVDDCSGSGSGSGSGLLNVADCSGLGSGLAIDAMTEEDVDRLLMHFTENDEATGDIYSGLGDLFDPSALNIDWSDLADPSAAENGDWGDCFIEMNDLN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo20932.1 vs. NCBI nr
Match: gi|902220111|gb|KNA18491.1| (hypothetical protein SOVF_070070 [Spinacia oleracea]) HSP 1 Score: 826.6 bits (2134), Expect = 1.900e-236 Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 1
BLAST of Spo20932.1 vs. NCBI nr
Match: gi|731327297|ref|XP_010674451.1| (PREDICTED: NAC domain-containing protein 78-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 397.1 bits (1019), Expect = 3.700e-107 Identity = 204/295 (69.15%), Postives = 233/295 (78.98%), Query Frame = 1
BLAST of Spo20932.1 vs. NCBI nr
Match: gi|296088554|emb|CBI37545.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 278.1 bits (710), Expect = 2.500e-71 Identity = 124/222 (55.86%), Postives = 173/222 (77.93%), Query Frame = 1
BLAST of Spo20932.1 vs. NCBI nr
Match: gi|925170139|gb|ALC78986.1| (NAC transcription factors 9 [Manihot esculenta]) HSP 1 Score: 275.8 bits (704), Expect = 1.200e-70 Identity = 121/189 (64.02%), Postives = 148/189 (78.31%), Query Frame = 1
BLAST of Spo20932.1 vs. NCBI nr
Match: gi|925170143|gb|ALC78988.1| (NAC transcription factors 11 [Manihot esculenta]) HSP 1 Score: 275.8 bits (704), Expect = 1.200e-70 Identity = 121/189 (64.02%), Postives = 148/189 (78.31%), Query Frame = 1
BLAST of Spo20932.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RG69_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_070070 PE=4 SV=1) HSP 1 Score: 826.6 bits (2134), Expect = 1.300e-236 Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 1
BLAST of Spo20932.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FE27_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g079110 PE=4 SV=1) HSP 1 Score: 397.1 bits (1019), Expect = 2.600e-107 Identity = 204/295 (69.15%), Postives = 233/295 (78.98%), Query Frame = 1
BLAST of Spo20932.1 vs. UniProtKB/TrEMBL
Match: D7U4E8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0044g01220 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 1.700e-71 Identity = 124/222 (55.86%), Postives = 173/222 (77.93%), Query Frame = 1
BLAST of Spo20932.1 vs. UniProtKB/TrEMBL
Match: A0A0M4FP00_MANES (NAC transcription factors 9 OS=Manihot esculenta PE=2 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 8.600e-71 Identity = 121/189 (64.02%), Postives = 148/189 (78.31%), Query Frame = 1
BLAST of Spo20932.1 vs. UniProtKB/TrEMBL
Match: A0A0M4G3N1_MANES (NAC transcription factors 11 OS=Manihot esculenta PE=2 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 8.600e-71 Identity = 121/189 (64.02%), Postives = 148/189 (78.31%), Query Frame = 1
BLAST of Spo20932.1 vs. ExPASy Swiss-Prot
Match: NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2) HSP 1 Score: 241.5 bits (615), Expect = 1.600e-62 Identity = 106/175 (60.57%), Postives = 131/175 (74.86%), Query Frame = 1
BLAST of Spo20932.1 vs. ExPASy Swiss-Prot
Match: NAC53_ARATH (NAC domain-containing protein 53 OS=Arabidopsis thaliana GN=NAC053 PE=2 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 1.000e-61 Identity = 105/177 (59.32%), Postives = 133/177 (75.14%), Query Frame = 1
BLAST of Spo20932.1 vs. ExPASy Swiss-Prot
Match: NAC82_ARATH (NAC domain-containing protein 82 OS=Arabidopsis thaliana GN=NAC082 PE=1 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 2.000e-60 Identity = 124/265 (46.79%), Postives = 165/265 (62.26%), Query Frame = 1
BLAST of Spo20932.1 vs. ExPASy Swiss-Prot
Match: NAC17_ARATH (NAC domain-containing protein 17 OS=Arabidopsis thaliana GN=NAC017 PE=2 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 4.900e-59 Identity = 105/182 (57.69%), Postives = 131/182 (71.98%), Query Frame = 1
BLAST of Spo20932.1 vs. ExPASy Swiss-Prot
Match: NAC13_ARATH (NAC domain-containing protein 13 OS=Arabidopsis thaliana GN=NAC13 PE=1 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 6.000e-57 Identity = 107/188 (56.91%), Postives = 134/188 (71.28%), Query Frame = 1
BLAST of Spo20932.1 vs. TAIR (Arabidopsis)
Match: AT5G64060.1 (NAC domain containing protein 103) HSP 1 Score: 260.0 bits (663), Expect = 2.500e-69 Identity = 110/185 (59.46%), Postives = 142/185 (76.76%), Query Frame = 1
BLAST of Spo20932.1 vs. TAIR (Arabidopsis)
Match: AT5G04410.1 (NAC domain containing protein 2) HSP 1 Score: 241.5 bits (615), Expect = 9.100e-64 Identity = 106/175 (60.57%), Postives = 131/175 (74.86%), Query Frame = 1
BLAST of Spo20932.1 vs. TAIR (Arabidopsis)
Match: AT3G10500.1 (NAC domain containing protein 53) HSP 1 Score: 238.8 bits (608), Expect = 5.900e-63 Identity = 105/177 (59.32%), Postives = 133/177 (75.14%), Query Frame = 1
BLAST of Spo20932.1 vs. TAIR (Arabidopsis)
Match: AT5G09330.1 (NAC domain containing protein 82) HSP 1 Score: 234.6 bits (597), Expect = 1.100e-61 Identity = 124/265 (46.79%), Postives = 165/265 (62.26%), Query Frame = 1
BLAST of Spo20932.1 vs. TAIR (Arabidopsis)
Match: AT1G34190.1 (NAC domain containing protein 17) HSP 1 Score: 229.9 bits (585), Expect = 2.700e-60 Identity = 105/182 (57.69%), Postives = 131/182 (71.98%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo20932.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo20932.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo20932.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo20932.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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