Spo20937 (gene)

Overview
NameSpo20937
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionTransmembrane protein, putative
Locationchr4 : 17091052 .. 17094076 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGGGTTCAATGACACAATGACTAGATGTCCAAAATGAGTCGACGCAAAAAAATAGAATGGCAACGATGAAGAAATTAGCAAGAAAATTCACCAAATCTCTCCGAAATTCAAATTCCCACGACGATAATCTCTCTCTTCCCACCGTCGACGAAGATCGTCCCATCGATACTCAAGGTCATTCAATTTTAGGGTTTAATTCCCATTTTCACCCAGTTCCTAAAATCACAGAAATTCAATTGCTAAAACTGACATTAATAATCTCTTTGTTATTTCAGAACAAGAAGAATTGGTTCGATCCCTGGAAAAATTACACTCCCAGCAAAGCCGATTATGGAGGGTAAATACTCAATCTTTCTAGTTATTTTGATTTGGGGTTTGCATTTTCTCTTAGGTTGCTTAGTTCAATAATTAATTTGGGTGTTCTTTCAATTGATTTTTGGTGGGTGTTGAAATTGTAGAGTATATTTGCGGTGTTGATGTCGTGCTACATTGCATTTCTGCTATTCTCCATGTATCACCAAGCTGCTTACCCTTGGGATTTGGTAATTACTGTTCTTCCCTTCTTCTGTAATTATTATGTTTGTGATTATTGTTCTTTTTCCATACTCGCATCAATCATGTAAAGGCCTGGACTATGTTAATCCGACACTTCATTTCACCTTAAGTACCCGATACTTCAACCCCGGACATTATTGTGACACTTAAACACTGCATTAGTGCATTTTGGACCAATCATGCAAATATTTCATAGACTGTATTGTGTCTGACACTTCTAGCCAAGTCTGAGTAACATAGTATGGAAACGATTTTGGGTCACCCACTGAGAATGTGAGACACAATTGTCCGTGTTCTAATCACAAGATGGTGTGCCAAAATCAGTTAACATGTATAACTTAACTTGGCGAGTAGACGAAATGGTGCAGTTGGCATAATGGCATGTCAGGAAATGTAATGATAGACTGGCAAGAGTATTGGTTGTAGTTTTATAGACTCAAAATAGGACTGTTGTTTGGTTTCTCTTGTATGTTTCAATTTTTCCTTTATCTGCCATTGCTACAGAACATGTTGTAGGAGGTTGCTGTTTTAATAGTATGTGCAGTGATATTAGTGTACTCCAAATTCGATGATGGCAGATTAGCTGCTGCTTATAGGGAGTGAGATTTGTCTAAATTCTAACCGAGGAAAGAGATTGTGTAGTTCTGACTTCTATTTAAAAGTTTTGGATTGATTTATATGGAAACTAAGAGTATGTTGATTGTTTATCAATGAATATTCTGAATGTTGAAACAGTTATTTGTTGAAGGATATGATGTTTGGCAACTCTAGAATTGTTTTTGGGGTAATTCTTGTCTGTGCAGTGTGCTGATAAAGTGATAACTGATATGTCCAACCATTTTCAAAATTGATGTTTGCTATATTGTCTTGAACAGCGTTACCATGCTTACTTCATGGAGGACATTGATTCACGGCTTATCATTCTTTCAGGTTACCTTATCTTGATCTTGCCTCTTTCATTCTCATTAAACCTTTGTTCTGCAATTCAAATATCATGACACCAAACTATTCTTCATAGGTTGTTAGAATACTTTTGCAATATTATTATATCTTTCCATTTTGGAGTGCCTAATGTCTTATTTTGTGCATGAGCACACGTTATTTCATCCTCCTTGAACTTCTTTTTATGTCGATATTGTTTTGTTATAGAGCAGATGTAATTGCATAAGCATGTACTCCATAACTTTTTCTAGTGTAGCTAAAGCATATACAACGTAGAAGAAGATATAATATAGGAGATATATGACTTATGATAGAAGGACGTTTTGGCTGTCATTTTTTTTTCTTTTCCCAGCGTAGCTAAAGCATATAAAAGAACATATTGTCTTACAATCTTCTGCGTGTTTTGTATTTTAAAGTTCATTGCCAACAGATATGCCTTGAAAACAAATCTCTCCCCACTTCCAACTCCTGATAAAATAGAAAAGAAATTGAACGGTAGTATAAGATCTTGCCACATATTTGACAATAAAACTATGTTACCCCAACTGAAAACCCTAGTGGAAAAATTTGCTGGTTCAAATGGTCTTTTTCTGTCCCATCACTAATTCACCTGTTAACAGATTGGTTAGCTGTTATCGCGTGTTCAACAGCCATTCTCGGGCTTATAAAGAGTTCAGAGCACCATAGACAGTGGATTTGGTATGCTGTGTTTGGTGGGATACCACTTGCTGTCTTCTGGCTATATTACATGCTTAGGTAAGAAGCATTATGTCAACTCCATATCTCTTTATCCATGTTATTTAATCAGTAATCACCATTTGGTACCAGTTTGTCACAACTCTCTAATATATATGTATTGGAAATTTGGAACCAATTTATTCCATGTTTACTTCCATCTTATCGTTCTTTTATATATTGTAGATTACCAAAGTTTCGGTGGGATATCATTTGGCTTCCATTTGGTCCTTTAAGGTACATGCTCAAAGGATTGAAGTAGACCCCTTAATTCCTTTAATGTAACTTTGCACATTAATTTTGAGCATTTCCTAAATGGTGTTACAAACTTACAATTGTTGTTCTTTCAGTGGGGCTGGGATATGCCTTTACGTGGATCATTTACTTCATGAATCGTCTGAAGAAGTTCGAAAGCTTAGAAATTACATGTATGCTTACAAAGCAAGCTAAATTCCTCTTCCTTCGTGACTTTCTTCTTATTCCTGAAATGGTGTTGAATTGATTCGGAGATCTTGACTGAGAAGATCGCAGTTTTTAAGGATTTTGCGAGGTTAGGGTGCGTGTGTGTACATGGTAACTTTGTTGTTATTTTTGCGCCATTTACCTGTAGTTTTGTTATTTGTTCACTTTGCTACGAGTAAGAAGTGGAAACGACGAAGAGTAACAGTCTGGTCTTTTTTTTTTTCCGGGCTTTCCTCTCTTGTTGTCATCTTACACTATCGCGTTGTGCATGGATTATTATTGTAACAGCTTCACTTTGCTTCAGTAAGATCCTTTCTTTTCCGATCTAAC

mRNA sequence

CTGGGTTCAATGACACAATGACTAGATGTCCAAAATGAGTCGACGCAAAAAAATAGAATGGCAACGATGAAGAAATTAGCAAGAAAATTCACCAAATCTCTCCGAAATTCAAATTCCCACGACGATAATCTCTCTCTTCCCACCGTCGACGAAGATCGTCCCATCGATACTCAAGAACAAGAAGAATTGGTTCGATCCCTGGAAAAATTACACTCCCAGCAAAGCCGATTATGGAGGAGTATATTTGCGGTGTTGATGTCGTGCTACATTGCATTTCTGCTATTCTCCATGTATCACCAAGCTGCTTACCCTTGGGATTTGCGTTACCATGCTTACTTCATGGAGGACATTGATTCACGGCTTATCATTCTTTCAGATTGGTTAGCTGTTATCGCGTGTTCAACAGCCATTCTCGGGCTTATAAAGAGTTCAGAGCACCATAGACAGTGGATTTGGTATGCTGTGTTTGGTGGGATACCACTTGCTGTCTTCTGGCTATATTACATGCTTAGATTACCAAAGTTTCGGTGGGATATCATTTGGCTTCCATTTGGTCCTTTAAGTGGGGCTGGGATATGCCTTTACGTGGATCATTTACTTCATGAATCGTCTGAAGAAGTTCGAAAGCTTAGAAATTACATGTATGCTTACAAAGCAAGCTAAATTCCTCTTCCTTCGTGACTTTCTTCTTATTCCTGAAATGGTGTTGAATTGATTCGGAGATCTTGACTGAGAAGATCGCAGTTTTTAAGGATTTTGCGAGGTTAGGGTGCGTGTGTGTACATGGTAACTTTGTTGTTATTTTTGCGCCATTTACCTGTAGTTTTGTTATTTGTTCACTTTGCTACGAGTAAGAAGTGGAAACGACGAAGAGTAACAGTCTGGTCTTTTTTTTTTTCCGGGCTTTCCTCTCTTGTTGTCATCTTACACTATCGCGTTGTGCATGGATTATTATTGTAACAGCTTCACTTTGCTTCAGTAAGATCCTTTCTTTTCCGATCTAAC

Coding sequence (CDS)

ATGGCAACGATGAAGAAATTAGCAAGAAAATTCACCAAATCTCTCCGAAATTCAAATTCCCACGACGATAATCTCTCTCTTCCCACCGTCGACGAAGATCGTCCCATCGATACTCAAGAACAAGAAGAATTGGTTCGATCCCTGGAAAAATTACACTCCCAGCAAAGCCGATTATGGAGGAGTATATTTGCGGTGTTGATGTCGTGCTACATTGCATTTCTGCTATTCTCCATGTATCACCAAGCTGCTTACCCTTGGGATTTGCGTTACCATGCTTACTTCATGGAGGACATTGATTCACGGCTTATCATTCTTTCAGATTGGTTAGCTGTTATCGCGTGTTCAACAGCCATTCTCGGGCTTATAAAGAGTTCAGAGCACCATAGACAGTGGATTTGGTATGCTGTGTTTGGTGGGATACCACTTGCTGTCTTCTGGCTATATTACATGCTTAGATTACCAAAGTTTCGGTGGGATATCATTTGGCTTCCATTTGGTCCTTTAAGTGGGGCTGGGATATGCCTTTACGTGGATCATTTACTTCATGAATCGTCTGAAGAAGTTCGAAAGCTTAGAAATTACATGTATGCTTACAAAGCAAGCTAA

Protein sequence

MATMKKLARKFTKSLRNSNSHDDNLSLPTVDEDRPIDTQEQEELVRSLEKLHSQQSRLWRSIFAVLMSCYIAFLLFSMYHQAAYPWDLRYHAYFMEDIDSRLIILSDWLAVIACSTAILGLIKSSEHHRQWIWYAVFGGIPLAVFWLYYMLRLPKFRWDIIWLPFGPLSGAGICLYVDHLLHESSEEVRKLRNYMYAYKAS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo20937.1Spo20937.1mRNA


Homology
[Close]
BLAST of Spo20937.1 vs. NCBI nr
Match: gi|902225833|gb|KNA20208.1| (hypothetical protein SOVF_054490 [Spinacia oleracea])

HSP 1 Score: 409.1 bits (1050), Expect = 4.600e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1 

		  

Query: 1   MATMKKLARKFTKSLRNSNSHDDNLSLPTVDEDRPIDTQEQEELVRSLEKLHSQQSRLWR 60
           MATMKKLARKFTKSLRNSNSHDDNLSLPTVDEDRPIDTQEQEELVRSLEKLHSQQSRLWR
Sbjct: 1   MATMKKLARKFTKSLRNSNSHDDNLSLPTVDEDRPIDTQEQEELVRSLEKLHSQQSRLWR 60

Query: 61  SIFAVLMSCYIAFLLFSMYHQAAYPWDLRYHAYFMEDIDSRLIILSDWLAVIACSTAILG 120
           SIFAVLMSCYIAFLLFSMYHQAAYPWDLRYHAYFMEDIDSRLIILSDWLAVIACSTAILG
Sbjct: 61  SIFAVLMSCYIAFLLFSMYHQAAYPWDLRYHAYFMEDIDSRLIILSDWLAVIACSTAILG 120

Query: 121 LIKSSEHHRQWIWYAVFGGIPLAVFWLYYMLRLPKFRWDIIWLPFGPLSGAGICLYVDHL 180
           LIKSSEHHRQWIWYAVFGGIPLAVFWLYYMLRLPKFRWDIIWLPFGPLSGAGICLYVDHL
Sbjct: 121 LIKSSEHHRQWIWYAVFGGIPLAVFWLYYMLRLPKFRWDIIWLPFGPLSGAGICLYVDHL 180

Query: 181 LHESSEEVRKLRNYMYAYKAS 202
           LHESSEEVRKLRNYMYAYKAS
Sbjct: 181 LHESSEEVRKLRNYMYAYKAS 201
[Close]
BLAST of Spo20937.1 vs. NCBI nr
Match: gi|870862917|gb|KMT14105.1| (hypothetical protein BVRB_4g079280 isoform B [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 326.6 bits (836), Expect = 3.000e-86
Identity = 158/197 (80.20%), Postives = 178/197 (90.36%), Query Frame = 1 

		  

Query: 3   TMKKLARKFTKSLRNSNSHDDNLSLPTVDEDRPIDTQEQEELVRSLEKLHSQQSRLWRSI 62
           TMK+LARK    + NS+ +DDNL L T+D+ RPIDTQEQEELVRSLEK+HSQQSRLWR++
Sbjct: 4   TMKRLARKLDNYIPNSD-NDDNL-LSTIDDSRPIDTQEQEELVRSLEKIHSQQSRLWRNV 63

Query: 63  FAVLMSCYIAFLLFSMYHQAAYPWDLRYHAYFMEDIDSRLIILSDWLAVIACSTAILGLI 122
           FA LMSCYIAFLLFS+ HQ AYPWDLR+HAYFMEDIDS LIILSDWLA+I+C TAILGL+
Sbjct: 64  FAALMSCYIAFLLFSIVHQFAYPWDLRFHAYFMEDIDSWLIILSDWLAIISCLTAILGLM 123

Query: 123 KSSEHHRQWIWYAVFGGIPLAVFWLYYMLRLPKFRWDIIWLPFGPLSGAGICLYVDHLLH 182
           KSSEHHRQWIWYA FGGI LAVFWLYYMLRLP+FRWD++WLPFGPLS  G+CLYVDHLL 
Sbjct: 124 KSSEHHRQWIWYAFFGGIILAVFWLYYMLRLPRFRWDVVWLPFGPLSATGVCLYVDHLLR 183

Query: 183 ESSEEVRKLRNYMYAYK 200
           ESSEEVRKLR+YMYA+K
Sbjct: 184 ESSEEVRKLRSYMYAFK 198
[Close]
BLAST of Spo20937.1 vs. NCBI nr
Match: gi|731327322|ref|XP_010674465.1| (PREDICTED: uncharacterized protein LOC104890614 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 320.1 bits (819), Expect = 2.800e-84
Identity = 155/194 (79.90%), Postives = 175/194 (90.21%), Query Frame = 1 

		  

Query: 3   TMKKLARKFTKSLRNSNSHDDNLSLPTVDEDRPIDTQEQEELVRSLEKLHSQQSRLWRSI 62
           TMK+LARK    + NS++ DDNL L T+D+ RPIDTQEQEELVRSLEK+HSQQSRLWR++
Sbjct: 4   TMKRLARKLDNYIPNSDN-DDNL-LSTIDDSRPIDTQEQEELVRSLEKIHSQQSRLWRNV 63

Query: 63  FAVLMSCYIAFLLFSMYHQAAYPWDLRYHAYFMEDIDSRLIILSDWLAVIACSTAILGLI 122
           FA LMSCYIAFLLFS+ HQ AYPWDLR+HAYFMEDIDS LIILSDWLA+I+C TAILGL+
Sbjct: 64  FAALMSCYIAFLLFSIVHQFAYPWDLRFHAYFMEDIDSWLIILSDWLAIISCLTAILGLM 123

Query: 123 KSSEHHRQWIWYAVFGGIPLAVFWLYYMLRLPKFRWDIIWLPFGPLSGAGICLYVDHLLH 182
           KSSEHHRQWIWYA FGGI LAVFWLYYMLRLP+FRWD++WLPFGPLS  G+CLYVDHLL 
Sbjct: 124 KSSEHHRQWIWYAFFGGIILAVFWLYYMLRLPRFRWDVVWLPFGPLSATGVCLYVDHLLR 183

Query: 183 ESSEEVRKLRNYMY 197
           ESSEEVRKLR+YM+
Sbjct: 184 ESSEEVRKLRSYMH 195
[Close]
BLAST of Spo20937.1 vs. NCBI nr
Match: gi|870862916|gb|KMT14104.1| (hypothetical protein BVRB_4g079280 isoform A [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 301.2 bits (770), Expect = 1.300e-78
Identity = 151/197 (76.65%), Postives = 169/197 (85.79%), Query Frame = 1 

		  

Query: 3   TMKKLARKFTKSLRNSNSHDDNLSLPTVDEDRPIDTQEQEELVRSLEKLHSQQSRLWRSI 62
           TMK+LARK    + NS+ +DDNL L T+D+ RPIDTQEQEELVRSLEK+HSQQSRLWR++
Sbjct: 4   TMKRLARKLDNYIPNSD-NDDNL-LSTIDDSRPIDTQEQEELVRSLEKIHSQQSRLWRNV 63

Query: 63  FAVLMSCYIAFLLFSMYHQAAYPWDLRYHAYFMEDIDSRLIILSDWLAVIACSTAILGLI 122
           FA LMSCYIAFLLFS+ HQ AYPWDLR+HAYFMEDIDS LIILS          AILGL+
Sbjct: 64  FAALMSCYIAFLLFSIVHQFAYPWDLRFHAYFMEDIDSWLIILS----------AILGLM 123

Query: 123 KSSEHHRQWIWYAVFGGIPLAVFWLYYMLRLPKFRWDIIWLPFGPLSGAGICLYVDHLLH 182
           KSSEHHRQWIWYA FGGI LAVFWLYYMLRLP+FRWD++WLPFGPLS  G+CLYVDHLL 
Sbjct: 124 KSSEHHRQWIWYAFFGGIILAVFWLYYMLRLPRFRWDVVWLPFGPLSATGVCLYVDHLLR 183

Query: 183 ESSEEVRKLRNYMYAYK 200
           ESSEEVRKLR+YMYA+K
Sbjct: 184 ESSEEVRKLRSYMYAFK 188
[Close]
BLAST of Spo20937.1 vs. NCBI nr
Match: gi|731327324|ref|XP_010674466.1| (PREDICTED: uncharacterized protein LOC104890614 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 294.7 bits (753), Expect = 1.300e-76
Identity = 148/194 (76.29%), Postives = 166/194 (85.57%), Query Frame = 1 

		  

Query: 3   TMKKLARKFTKSLRNSNSHDDNLSLPTVDEDRPIDTQEQEELVRSLEKLHSQQSRLWRSI 62
           TMK+LARK    + NS++ DDNL L T+D+ RPIDTQEQEELVRSLEK+HSQQSRLWR++
Sbjct: 4   TMKRLARKLDNYIPNSDN-DDNL-LSTIDDSRPIDTQEQEELVRSLEKIHSQQSRLWRNV 63

Query: 63  FAVLMSCYIAFLLFSMYHQAAYPWDLRYHAYFMEDIDSRLIILSDWLAVIACSTAILGLI 122
           FA LMSCYIAFLLFS+ HQ AYPWDLR+HAYFMEDIDS LIILS          AILGL+
Sbjct: 64  FAALMSCYIAFLLFSIVHQFAYPWDLRFHAYFMEDIDSWLIILS----------AILGLM 123

Query: 123 KSSEHHRQWIWYAVFGGIPLAVFWLYYMLRLPKFRWDIIWLPFGPLSGAGICLYVDHLLH 182
           KSSEHHRQWIWYA FGGI LAVFWLYYMLRLP+FRWD++WLPFGPLS  G+CLYVDHLL 
Sbjct: 124 KSSEHHRQWIWYAFFGGIILAVFWLYYMLRLPRFRWDVVWLPFGPLSATGVCLYVDHLLR 183

Query: 183 ESSEEVRKLRNYMY 197
           ESSEEVRKLR+YM+
Sbjct: 184 ESSEEVRKLRSYMH 185
[Close]
BLAST of Spo20937.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RL31_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_054490 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 3.200e-111
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1 

		  

Query: 1   MATMKKLARKFTKSLRNSNSHDDNLSLPTVDEDRPIDTQEQEELVRSLEKLHSQQSRLWR 60
           MATMKKLARKFTKSLRNSNSHDDNLSLPTVDEDRPIDTQEQEELVRSLEKLHSQQSRLWR
Sbjct: 1   MATMKKLARKFTKSLRNSNSHDDNLSLPTVDEDRPIDTQEQEELVRSLEKLHSQQSRLWR 60

Query: 61  SIFAVLMSCYIAFLLFSMYHQAAYPWDLRYHAYFMEDIDSRLIILSDWLAVIACSTAILG 120
           SIFAVLMSCYIAFLLFSMYHQAAYPWDLRYHAYFMEDIDSRLIILSDWLAVIACSTAILG
Sbjct: 61  SIFAVLMSCYIAFLLFSMYHQAAYPWDLRYHAYFMEDIDSRLIILSDWLAVIACSTAILG 120

Query: 121 LIKSSEHHRQWIWYAVFGGIPLAVFWLYYMLRLPKFRWDIIWLPFGPLSGAGICLYVDHL 180
           LIKSSEHHRQWIWYAVFGGIPLAVFWLYYMLRLPKFRWDIIWLPFGPLSGAGICLYVDHL
Sbjct: 121 LIKSSEHHRQWIWYAVFGGIPLAVFWLYYMLRLPKFRWDIIWLPFGPLSGAGICLYVDHL 180

Query: 181 LHESSEEVRKLRNYMYAYKAS 202
           LHESSEEVRKLRNYMYAYKAS
Sbjct: 181 LHESSEEVRKLRNYMYAYKAS 201
[Close]
BLAST of Spo20937.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CK74_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g079280 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 2.100e-86
Identity = 158/197 (80.20%), Postives = 178/197 (90.36%), Query Frame = 1 

		  

Query: 3   TMKKLARKFTKSLRNSNSHDDNLSLPTVDEDRPIDTQEQEELVRSLEKLHSQQSRLWRSI 62
           TMK+LARK    + NS+ +DDNL L T+D+ RPIDTQEQEELVRSLEK+HSQQSRLWR++
Sbjct: 4   TMKRLARKLDNYIPNSD-NDDNL-LSTIDDSRPIDTQEQEELVRSLEKIHSQQSRLWRNV 63

Query: 63  FAVLMSCYIAFLLFSMYHQAAYPWDLRYHAYFMEDIDSRLIILSDWLAVIACSTAILGLI 122
           FA LMSCYIAFLLFS+ HQ AYPWDLR+HAYFMEDIDS LIILSDWLA+I+C TAILGL+
Sbjct: 64  FAALMSCYIAFLLFSIVHQFAYPWDLRFHAYFMEDIDSWLIILSDWLAIISCLTAILGLM 123

Query: 123 KSSEHHRQWIWYAVFGGIPLAVFWLYYMLRLPKFRWDIIWLPFGPLSGAGICLYVDHLLH 182
           KSSEHHRQWIWYA FGGI LAVFWLYYMLRLP+FRWD++WLPFGPLS  G+CLYVDHLL 
Sbjct: 124 KSSEHHRQWIWYAFFGGIILAVFWLYYMLRLPRFRWDVVWLPFGPLSATGVCLYVDHLLR 183

Query: 183 ESSEEVRKLRNYMYAYK 200
           ESSEEVRKLR+YMYA+K
Sbjct: 184 ESSEEVRKLRSYMYAFK 198
[Close]
BLAST of Spo20937.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CQ21_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g079280 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 9.300e-79
Identity = 151/197 (76.65%), Postives = 169/197 (85.79%), Query Frame = 1 

		  

Query: 3   TMKKLARKFTKSLRNSNSHDDNLSLPTVDEDRPIDTQEQEELVRSLEKLHSQQSRLWRSI 62
           TMK+LARK    + NS+ +DDNL L T+D+ RPIDTQEQEELVRSLEK+HSQQSRLWR++
Sbjct: 4   TMKRLARKLDNYIPNSD-NDDNL-LSTIDDSRPIDTQEQEELVRSLEKIHSQQSRLWRNV 63

Query: 63  FAVLMSCYIAFLLFSMYHQAAYPWDLRYHAYFMEDIDSRLIILSDWLAVIACSTAILGLI 122
           FA LMSCYIAFLLFS+ HQ AYPWDLR+HAYFMEDIDS LIILS          AILGL+
Sbjct: 64  FAALMSCYIAFLLFSIVHQFAYPWDLRFHAYFMEDIDSWLIILS----------AILGLM 123

Query: 123 KSSEHHRQWIWYAVFGGIPLAVFWLYYMLRLPKFRWDIIWLPFGPLSGAGICLYVDHLLH 182
           KSSEHHRQWIWYA FGGI LAVFWLYYMLRLP+FRWD++WLPFGPLS  G+CLYVDHLL 
Sbjct: 124 KSSEHHRQWIWYAFFGGIILAVFWLYYMLRLPRFRWDVVWLPFGPLSATGVCLYVDHLLR 183

Query: 183 ESSEEVRKLRNYMYAYK 200
           ESSEEVRKLR+YMYA+K
Sbjct: 184 ESSEEVRKLRSYMYAFK 188
[Close]
BLAST of Spo20937.1 vs. UniProtKB/TrEMBL
Match: A0A061GLY7_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_037719 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.300e-72
Identity = 131/197 (66.50%), Postives = 163/197 (82.74%), Query Frame = 1 

		  

Query: 4   MKKLARKFTKSLRNSNSHDDNLSLPTVDEDRPIDTQEQEELVRSLEKLHSQQSRLWRSIF 63
           M+KLAR F KS       DD  SLPT+D+ RP+DT EQEE+VRSLE++H+QQS  W+S+F
Sbjct: 1   MRKLARNFRKS------EDDKFSLPTLDDSRPMDTHEQEEVVRSLERMHAQQSLQWKSVF 60

Query: 64  AVLMSCYIAFLLFSMYHQAAYPWDLRYHAYFMEDIDSRLIILSDWLAVIACSTAILGLIK 123
           A L+ CY AFLL+S+Y QA +PW+LRYHAYFMED+ S +II +DWLAV+ CS AI+GL+ 
Sbjct: 61  AALLFCYSAFLLYSIYQQALFPWELRYHAYFMEDVGSWMIITADWLAVLVCSMAIMGLLN 120

Query: 124 SSEHHRQWIWYAVFGGIPLAVFWLYYMLRLPKFRWDIIWLPFGPLSGAGICLYVDHLLHE 183
           +S+ HR+WI Y+ F G+ LAVFWLYYMLR+PKFRWD+IWLP GP SG+G+CLYVDHLL E
Sbjct: 121 NSKDHRRWIEYSCFVGLMLAVFWLYYMLRMPKFRWDVIWLPLGPFSGSGVCLYVDHLLSE 180

Query: 184 SSEEVRKLRNYMYAYKA 201
           SSEEVRKLR+YMYA+KA
Sbjct: 181 SSEEVRKLRSYMYAFKA 191
[Close]
BLAST of Spo20937.1 vs. UniProtKB/TrEMBL
Match: A0A0D2Q7X5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G029800 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 1.900e-71
Identity = 130/197 (65.99%), Postives = 160/197 (81.22%), Query Frame = 1 

		  

Query: 4   MKKLARKFTKSLRNSNSHDDNLSLPTVDEDRPIDTQEQEELVRSLEKLHSQQSRLWRSIF 63
           M+KLAR+F       NS DD  SLPTVD+ RP+D  EQEELVRSLEK+ + QS  W+S+F
Sbjct: 15  MRKLARQFR------NSEDDKFSLPTVDDARPMDINEQEELVRSLEKMQAHQSLQWKSVF 74

Query: 64  AVLMSCYIAFLLFSMYHQAAYPWDLRYHAYFMEDIDSRLIILSDWLAVIACSTAILGLIK 123
           A L+ CY AFLL+S+Y Q  +PW+LRYHAYFMED+DS +II +DWLAV+ACS AI+GL  
Sbjct: 75  AALLFCYSAFLLYSIYQQTLFPWELRYHAYFMEDVDSWIIITADWLAVLACSMAIMGLFN 134

Query: 124 SSEHHRQWIWYAVFGGIPLAVFWLYYMLRLPKFRWDIIWLPFGPLSGAGICLYVDHLLHE 183
           +S+ H +WIWY+   G+ LA+FW+YYMLR+PKFRWD+IWLP GPL GAG+CLYVDHLL E
Sbjct: 135 NSKDHIKWIWYSCSIGLVLAIFWVYYMLRMPKFRWDVIWLPLGPLCGAGVCLYVDHLLSE 194

Query: 184 SSEEVRKLRNYMYAYKA 201
           SSEEVRKLR+YMYA+KA
Sbjct: 195 SSEEVRKLRSYMYAFKA 205
[Close]
BLAST of Spo20937.1 vs. TAIR (Arabidopsis)
Match: AT4G26240.1 (unknown protein)

HSP 1 Score: 256.1 bits (653), Expect = 1.700e-68
Identity = 123/199 (61.81%), Postives = 154/199 (77.39%), Query Frame = 1 

		  

Query: 4   MKKLARKFTKSLRNSNSHDDNLSLPTVDE--DRPIDTQEQEELVRSLEKLHSQQSRLWRS 63
           MKKLARK+ ++ R+ +  DD   LPT ++   RPIDTQEQEE VR LE+ H+QQS  WRS
Sbjct: 1   MKKLARKWRRTRRDED--DDKFVLPTSEDVDSRPIDTQEQEEYVRYLEEAHAQQSLQWRS 60

Query: 64  IFAVLMSCYIAFLLFSMYHQAAYPWDLRYHAYFMEDIDSRLIILSDWLAVIACSTAILGL 123
           +F VL+ C+ AFL +S++ Q   PW+LRYHAYFMED+ S ++I ++W+A++ACS +I+GL
Sbjct: 61  VFVVLLICFGAFLFYSIFQQFMSPWELRYHAYFMEDLKSWMVISAEWIAIMACSLSIVGL 120

Query: 124 IKSSEHHRQWIWYAVFGGIPLAVFWLYYMLRLPKFRWDIIWLPFGPLSGAGICLYVDHLL 183
                 HR+W WY+   G  L +FWLYY+LRLPKFRWD IWLPFGPL GAGICLYVDHLL
Sbjct: 121 RDKKNDHRRWFWYSCVVGSALTIFWLYYLLRLPKFRWDAIWLPFGPLCGAGICLYVDHLL 180

Query: 184 HESSEEVRKLRNYMYAYKA 201
            ESSEEV+KLRNYMYAYKA
Sbjct: 181 EESSEEVKKLRNYMYAYKA 197
The following BLAST results are available for this feature:
BLAST of Spo20937.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902225833|gb|KNA20208.1|4.6e-111100.hypothetical protein SOVF_0544... [more]
gi|870862917|gb|KMT14105.1|3.0e-8680.2hypothetical protein BVRB_4g07... [more]
gi|731327322|ref|XP_010674465.1|2.8e-8479.9PREDICTED: uncharacterized pro... [more]
gi|870862916|gb|KMT14104.1|1.3e-7876.6hypothetical protein BVRB_4g07... [more]
gi|731327324|ref|XP_010674466.1|1.3e-7676.2PREDICTED: uncharacterized pro... [more]
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BLAST of Spo20937.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RL31_SPIOL3.2e-111100.Uncharacterized protein OS=Spi... [more]
A0A0J8CK74_BETVU2.1e-8680.2Uncharacterized protein OS=Bet... [more]
A0A0J8CQ21_BETVU9.3e-7976.6Uncharacterized protein OS=Bet... [more]
A0A061GLY7_THECC1.3e-7266.5Uncharacterized protein isofor... [more]
A0A0D2Q7X5_GOSRA1.9e-7165.9Uncharacterized protein OS=Gos... [more]
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BLAST of Spo20937.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo20937.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G26240.11.7e-6861.8unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36784FAMILY NOT NAMEDcoord: 4..201
score: 1.8

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016043 cellular component organization
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0032940 secretion by cell
biological_process GO:0006465 signal peptide processing
biological_process GO:0006508 proteolysis
biological_process GO:0009987 cellular process
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0010051 xylem and phloem pattern formation
biological_process GO:0009616 virus induced gene silencing
biological_process GO:0010050 vegetative phase change
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0046686 response to cadmium ion
biological_process GO:0008152 metabolic process
biological_process GO:0048519 negative regulation of biological process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0009887 animal organ morphogenesis
biological_process GO:0016310 phosphorylation
biological_process GO:0009058 biosynthetic process
biological_process GO:0015031 protein transport
biological_process GO:0048439 flower morphogenesis
biological_process GO:0010158 abaxial cell fate specification
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0009850 auxin metabolic process
biological_process GO:0030244 cellulose biosynthetic process
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0010582 floral meristem determinacy
biological_process GO:0048438 floral whorl development
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0009506 plasmodesma
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005768 endosome
cellular_component GO:0030122 AP-2 adaptor complex
cellular_component GO:0005829 cytosol
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005795 Golgi stack
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005787 signal peptidase complex
cellular_component GO:0005634 nucleus
molecular_function GO:0008233 peptidase activity
molecular_function GO:0005488 binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008565 protein transporter activity
RNA-Seq Expression