Spo20970 (gene)

Overview
NameSpo20970
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionGTF2H2
LocationSpoScf_00918 : 175938 .. 182099 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGTGGGAGAAGAGGCTAAGAAACTCAGGGTAAACAACGAAATAAGAGGGGAGAAAAAAAAAAGGAAAATGGAATTTTAAAGCAGTAAGAGAAATGCAAGGGTATTTTAGACTTTTAAATGGGGAACATCAAAAGTGTAATTACAAATTTAACCTCAGCTGTTCCTTTATATAATAGAGAAGATAATATGTATGTTCATTGTATCCTCTTCAATATTTTCGAAATATTCAAGGATTCTTGTTCTCCAACCAAAACCCTAGCTATTGTATTATATATATACCCCATAATAATATTCTCTCTTATGTCTCCAGTTTATTCATAGGCACCTACAAATACAAACTCTGTACTCGACTTTTTCGGCTCTGGTCACAAGCCGGATTTTCAACTATCCGCTTTTTCAGATACCCAAAACGTCGGATACCCGATAAATCGTAATTGATTTATTACGAGAAATTCCGAGTTAATCTCAGTGATTGGAAAAAATTTCCAATCAAATGCCATTTTCGTAAATATTTTGCTTGAAAACTATAGATGGTATAATATTAGGTGTTGACTGTATATTTGTAGTTATTGACTGCATATTATTTGGTGTTGATTGTATACCACTTATCGTTGACGGTATATTTTATGATTGCTGATGAATTACTAAAATGCAATATTGTTTATTGGTAAGTGATTGACTGTATATTTATAGTAGTGTATTGTTTATTAGTAGAAGTTTATTGTATATTACGACCTGTTGACTGTATATTATATAGTTGTTTATGTATTATGAGAATACAATAATGACTGTACATGTGGCCCATAGTTAATGACATGTCATTGTACTTTGACCCGCATTTAACGGCATTTTTGTAATAAAAACGTCAATTATTTACAAAAATGGAGTTAAGCTAAAAAATGGGGTCTAACCTTTTGAATTTTTCACCGTTTAGGACCTATACCTTTTTTTTTCACCGTTTGGGACCTCATTCCCCTTTTCCGGCCAAATTTACTAGAGTACGTTAAAAGGTTAGGTCCTTGGGTTAAAAGGTTAAAGTAAATCAAAAGTTTGAGGACTAACCTTTTCGTTTTTTCACCTTTCAGGACCTGAACTTTCTTTTTTCACCTTTTGAGACCTCATTAAAGTTTTCATGTAATTCCAATTCAATTATTAAAGTTTCTAACCATTAACATATACTACCTTCGTTCTTTAATGTTCTTTATGCTTTGGAATATGTGTCTAAAGTATGAAAACTTTGATCGTGGATTCTCACTGGTATATACATCAAAGTGTTATCATGTAAGATCTTGTTAGATTGGTCTCGTTATGTATTTTCAAAATATCAAATTTTTATGATTTTTTCACATACGGAAATGGATATATAAGTCGTTAAATATTGCTTTGGAGTACGCGCAAATAATAAGCGTAAAGAACATTAAGGAACGGAGGTAGTAATAAGCTCAAATTAAAATAATATGTAACGTAATTCATAAATTTAGCCCATATATAAATTGATTTGGGTATCAAATAATCTAATGAATAAAGAAGCAAATAATTATTTACAAACTGATCATATTTTATATATTCGGTTATGGTGTCCAATGAAAATAGAAGAATTAAGCAATTTATATAGTAGAGTACGATATTCATACAATTATACTCAAAGGTTTACGGGGATGGTGGAACTAAAAATACACTACGGAATTTTCCGCCCTGGACCCAAGTTGTTAGGAAGTTCTGCCATTGATGGTATATCCTCACAATTGTTTGTGTTTTGTTTGAAGAATATTAATAATGTCCACACAAAAACGTAAAATTAATAAAAATAGGTTAATTTTAAATGAATTTTGATTTGATCACAAGTTAATATATCATACTAGTTCTTGATTGTTTTATGAGAGTAAAGACAATTGGTTTATTGATGCTCATATTTTATGAGGTACTTAAATGATTTATGCTTAACTCGATCAAAATTAATCAGCAATCTCCGAATTAAAATTTACGACCTCAAATTTTCTATAAACATATTCAAATAAGTTGTTATTGGATTACGTAAATTAAGTTTCAACTATTAAATGTCTTATGAATGAGTAAAGATTATCTATGATGTTTGGAGAAGAATACTATGTAGTTTTAATTGTATGATGGGGTTTGAGAAAGATGAATTATTATTATTATTATTGTTAAATATATTAATAACAATTATTACATAATAATTAATAAAAATAAAAATATTAATAACTATTATTATAATTATTAATTTGAGCGCTAACTCTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTGAGTGATAGTATGGTTAACGGTGAGTTAAACTATGGTTAACTGGCCAGAAAATGAATATGAGTCCCCAAAAGGTGAAAAAAAAAAGTTAAGGTCCTAAAGGGTGAAAAAACCAAAAGGTTGGACCCCAACCTTTAGCTTAACTCTACAAATTATTTTTCAGTATTCTAATTTCGTCATTTTGGGTTCTTACGGGGTGTTGATGGTGGCGTTAGGTAGCATTGGCGATTTGATGGCGAATCGTCAGGGTAATAACTTTGTAGTATAATTTTTATGATATTGATTTTTGGGTAGCTTGGGCTGCGGCGGTGGTGGAGTAACATTAGTTAGGCTGTCATGGTGTTTGTTTGATCGAGTTTGCACTGTCGATTTTATTTTCAGTTAATATAATTCCATATACCCACCTCGCCCTTGAGTATGAGAATTCCATACCATAGAGGTTTTGAAGGTGGGTCCCCAAATTTTAAATTTACTCTTATAAAAATAGTAAACCAAACATCAAGTATGGGGTTGGATAATTTCAAACACATACATGATTTCAAAATATGATGAACCAAATACACACTTAATGATTTAATTTCCATTTGTCTACTTGGGCCAGGCCCAAATTTGTAGCACGGTTTCGAATATAGGCTATGCAAGTGTGAAATACAGAGTAAGTGAGATTTTCTTCAACCTATCTTCTTCAACCTAATTTCAGTTTTCTGACGGAAAATTTTTCATACAATCAGCAAGTTTGCTTGGGAAACGTGAATATTAGATTGAAATCTCGTTTCCCATTCGTTTCCGGGATGAATTCAGTTTCAAACACGTCTCTATTTTTCTGAAACGGTTTCGGCGCGCGTTTCCCGGTTTCCCCGTTCCAGGACGTTTCGGAAACGGTAAGTCGTGATTTTTTGGCGTTTCCGTGCTTCGTAGCTTTTTTTCAATTTGTTTTTGATTAAAAATACTATGTTTTGGGCATAATTTAGTTTTATTTTGTTGGAGGGAGCAGAGTAGAAAAGAGCAATAATTTAAGGACATAACAAAGTATAGTTTGATTGAATAAGAATTTGGGCAATTTTTTTTTTTTTGTTATTTGAATTCTGGACCTTGAGGAAATGTAGGTGGGGGGTCGTTCTGTTCATGAGAAGATAGTGTAGAATTAAGTTTTCAAGACTGGTCTTGTCAAATTGAAGAATTTTACTGGTTAATTGTTTGGCTGCTAGTAAGTATATGCTCTATACCTGCAATTTTACTGGTTAATTGTTTGTCTGCTAGTAAATATATATATGCTCTATACCTGCAATTTTTTTTTTTCATAGTTAGGATCAAAGATTGTTAATTGAAGCACATAAAACCAGCTATCGTGCTGTGTATGTCGAGTTTCATCTAAGAAACACAATGACTTTTGAGTTCTGAGGTTGTAAATTGTGACTAAAAGAGAAGCAATCCCCAAGCCGAGCCTAAGCCAAGGTACTTGAGACAGGCAACAGGTCAGTGCCCTGGTTCAGTGACTTCAGTCAGTTTTGCCCCTAATTGCTAGAGGAGAAATTAGGGGGAGGGTAGAAAGTGAAAGAAGATAGTACATGTAAATTTTTTTTGCAGGTCTGAATATGTCTTGGAGTTTGTACTTGCACCATAAAAACATTTATTTTCTTTAGTCTTCGTTTTTTCTTGGATTTGTTTTTCTCTCAACTATTCTAGTAAAAGTGCTTTGGTGGCTCATTGATTTTTGTATAATAGTACCTGATTTTTAATATTTATCATGCTTAGATCTAGAGAGGATGAACAGCATTGAACATAGGGCGGTTAGCAATAGCAGAGGAAGACGGCTTAACCGAGATGAAGATGAGGATGATGAAGATGAAGATAATGATATGTCTGCATGGGAGAAAGCCTATACCGATGAGAGATCATGGGAATCTTTGCAAGAAGATGAATCTGGGCTACTTCGTCCAATTGATAATACGTCGATCTACCATGCTCAATATCGTCGGCGTATTCGTTCCATCTCGTCTACCTCAACCTCTGCTCGAATTCAGAAAGGCCTTATTCGCTATATCTATGTCGTCATGGATTTCTCAAGGGTAATGAAGTTCCAAATATGTAGTATTTTTCATTTTAAGCAAAACCCAACCTTCACTGCTAGGTATAGCTTTTGGGAAAGGCTAATTTTTATTATGATTTCAACTTTCAACACCAAATACAGCAGGTTCTTTCTTTTGTTTTTAGAGGGTGGATATTGGAGAGGGTTGGCATCGAGGGATGAAATTTTTTACTGCTAATTAGAAGGATCTCTGTTTATACATGATGTTGTTCTCTGATCAGTATCTCTGATAGACCCTGTAATGTTTTTATACAAATACATTGCCGGACTTTGCATGCAGCCATGAAGTTCTTGACTATAAATATCTGAAGCATTTGGCACACATTATATGCTTTAAGCCTTGAGTCACTGATCATAAATTTAAAGTTCGGATGTTCACTAGTTTTAACCTGGATAAGTACATGACTGGGGAAAACTATGATAATGCTTCACTGTTCATTGATGTGAGGGCTTGAAATATTGAGGAGAATTTTTTTGCGTAGCTACTCACTCAGTCATTGTAGGTATATCATTTAGATATTTGGAGCAGCTCAACACCTGTCTGTTCTATTTTAAATTTTTTTAATCCTTCTCTGTAGGCAGCAGCGGAGATGGATTTTAAACCAAGCAGAATGGCCGTTGTTGCCAAACATGTAGAGGCTTTTGTAAGGGAGTTTTTTGACCAAAATCCACTTAGTCAAATTGGTCTTGTGGCAATTAAAGACGGTGTTTCTCATTGCCTAACGGATATGGGTGGTAGCCCGGAGTCTCATATTAAGGCTTTGATGAAGAAGTTGGAGTGTTCAGGGGATGCGTCTTTACAGAATGCCTTAGAACTTGTTCATGAATGCTTGAATCAAATTCCATCATATGGCCACCGTGAAGTTATAATTTTGTATTCGGCTCTTAGTACCTGTGATCCAGGTGACATAATGGAGACTATTCAAAAGTGCAAGAAGTCGAAGATTAGGTGTTCAATACTGGGTCTTTCTGCAGAGATGTTTATTTGCAAACACATATGCCAGGAAACAGGTGGATCATATGCTATTGCCTTGGATGAGGTGAGTTTTTACTACTGGAAAAGTGTATGATATGAAATTATTTCTAGTTGTAAACTTAATGGTGAAGATGTTTAGTGCTAATTATAGTGCAATATACTCTTCTAGTAATAGTTAACTGTTGAATGACTGATTTAGTTTTCCTTCCTTGTAGTTCCATCTGAAAGAGTTGTTGTTGGAACATGCACCTCCTCCTCCAGCCATCGCTGAGTATGCAATTGCTAACTTGATCAAGATGGGTTTTCCACAAAGAGCAGCGGAAGGCGTGGTCTCAATATGTGTATGTCATAAAGAGGCTAAGGTTGGTGCTGGATACACCTGTCCGAAATGCAAGGCTCGTGTTTGTGAGCTGCCCACAGAATGTCGTATATGTGGGCTAACACTTGTTTCTTCTCCCCATTTAGCAAGGTCATATCATCATCTCTTTCCAATAACACCGTTTGATGAGGTATCTTTTCCAAACAGAAAGATTGCCGGACAGAAATCATATGAAACATGCTTTGGATGCATGCACAATCTGATGGATCCTGGTAAGCATTCATACATCAGTAGTTGGGAGTTCGAATAA

mRNA sequence

ATGGGAGTGGGAGAAGAGGCTAAGAAACTCAGGATTGAAATCTCGTTTCCCATTCGTTTCCGGGATGAATTCAGTTTCAAACACGTCTCTATTTTTCTGAAACGGTTTCGGCGCGCGTTTCCCGGTTTCCCCGTTCCAGGACGTTTCGGAAACGATCTAGAGAGGATGAACAGCATTGAACATAGGGCGGTTAGCAATAGCAGAGGAAGACGGCTTAACCGAGATGAAGATGAGGATGATGAAGATGAAGATAATGATATGTCTGCATGGGAGAAAGCCTATACCGATGAGAGATCATGGGAATCTTTGCAAGAAGATGAATCTGGGCTACTTCGTCCAATTGATAATACGTCGATCTACCATGCTCAATATCGTCGGCGTATTCGTTCCATCTCGTCTACCTCAACCTCTGCTCGAATTCAGAAAGGCCTTATTCGCTATATCTATGTCGTCATGGATTTCTCAAGGGCAGCAGCGGAGATGGATTTTAAACCAAGCAGAATGGCCGTTGTTGCCAAACATGTAGAGGCTTTTGTAAGGGAGTTTTTTGACCAAAATCCACTTAGTCAAATTGGTCTTGTGGCAATTAAAGACGGTGTTTCTCATTGCCTAACGGATATGGGTGGTAGCCCGGAGTCTCATATTAAGGCTTTGATGAAGAAGTTGGAGTGTTCAGGGGATGCGTCTTTACAGAATGCCTTAGAACTTGTTCATGAATGCTTGAATCAAATTCCATCATATGGCCACCGTGAAGTTATAATTTTGTATTCGGCTCTTAGTACCTGTGATCCAGGTGACATAATGGAGACTATTCAAAAGTGCAAGAAGTCGAAGATTAGGTGTTCAATACTGGGTCTTTCTGCAGAGATGTTTATTTGCAAACACATATGCCAGGAAACAGGTGGATCATATGCTATTGCCTTGGATGAGTTCCATCTGAAAGAGTTGTTGTTGGAACATGCACCTCCTCCTCCAGCCATCGCTGAGTATGCAATTGCTAACTTGATCAAGATGGGTTTTCCACAAAGAGCAGCGGAAGGCGTGGTCTCAATATGTGTATGTCATAAAGAGGCTAAGGTTGGTGCTGGATACACCTGTCCGAAATGCAAGGCTCGTGTTTGTGAGCTGCCCACAGAATGTCGTATATGTGGGCTAACACTTGTTTCTTCTCCCCATTTAGCAAGGTCATATCATCATCTCTTTCCAATAACACCGTTTGATGAGGTATCTTTTCCAAACAGAAAGATTGCCGGACAGAAATCATATGAAACATGCTTTGGATGCATGCACAATCTGATGGATCCTGGTAAGCATTCATACATCAGTAGTTGGGAGTTCGAATAA

Coding sequence (CDS)

ATGGGAGTGGGAGAAGAGGCTAAGAAACTCAGGATTGAAATCTCGTTTCCCATTCGTTTCCGGGATGAATTCAGTTTCAAACACGTCTCTATTTTTCTGAAACGGTTTCGGCGCGCGTTTCCCGGTTTCCCCGTTCCAGGACGTTTCGGAAACGATCTAGAGAGGATGAACAGCATTGAACATAGGGCGGTTAGCAATAGCAGAGGAAGACGGCTTAACCGAGATGAAGATGAGGATGATGAAGATGAAGATAATGATATGTCTGCATGGGAGAAAGCCTATACCGATGAGAGATCATGGGAATCTTTGCAAGAAGATGAATCTGGGCTACTTCGTCCAATTGATAATACGTCGATCTACCATGCTCAATATCGTCGGCGTATTCGTTCCATCTCGTCTACCTCAACCTCTGCTCGAATTCAGAAAGGCCTTATTCGCTATATCTATGTCGTCATGGATTTCTCAAGGGCAGCAGCGGAGATGGATTTTAAACCAAGCAGAATGGCCGTTGTTGCCAAACATGTAGAGGCTTTTGTAAGGGAGTTTTTTGACCAAAATCCACTTAGTCAAATTGGTCTTGTGGCAATTAAAGACGGTGTTTCTCATTGCCTAACGGATATGGGTGGTAGCCCGGAGTCTCATATTAAGGCTTTGATGAAGAAGTTGGAGTGTTCAGGGGATGCGTCTTTACAGAATGCCTTAGAACTTGTTCATGAATGCTTGAATCAAATTCCATCATATGGCCACCGTGAAGTTATAATTTTGTATTCGGCTCTTAGTACCTGTGATCCAGGTGACATAATGGAGACTATTCAAAAGTGCAAGAAGTCGAAGATTAGGTGTTCAATACTGGGTCTTTCTGCAGAGATGTTTATTTGCAAACACATATGCCAGGAAACAGGTGGATCATATGCTATTGCCTTGGATGAGTTCCATCTGAAAGAGTTGTTGTTGGAACATGCACCTCCTCCTCCAGCCATCGCTGAGTATGCAATTGCTAACTTGATCAAGATGGGTTTTCCACAAAGAGCAGCGGAAGGCGTGGTCTCAATATGTGTATGTCATAAAGAGGCTAAGGTTGGTGCTGGATACACCTGTCCGAAATGCAAGGCTCGTGTTTGTGAGCTGCCCACAGAATGTCGTATATGTGGGCTAACACTTGTTTCTTCTCCCCATTTAGCAAGGTCATATCATCATCTCTTTCCAATAACACCGTTTGATGAGGTATCTTTTCCAAACAGAAAGATTGCCGGACAGAAATCATATGAAACATGCTTTGGATGCATGCACAATCTGATGGATCCTGGTAAGCATTCATACATCAGTAGTTGGGAGTTCGAATAA

Protein sequence

MGVGEEAKKLRIEISFPIRFRDEFSFKHVSIFLKRFRRAFPGFPVPGRFGNDLERMNSIEHRAVSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPIDNTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHVEAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALELVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKHICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCHKEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRKIAGQKSYETCFGCMHNLMDPGKHSYISSWEFE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo20970.1Spo20970.1mRNA


Homology
[Close]
BLAST of Spo20970.1 vs. NCBI nr
Match: gi|902179308|gb|KNA09327.1| (hypothetical protein SOVF_154630 [Spinacia oleracea])

HSP 1 Score: 775.8 bits (2002), Expect = 4.100e-221
Identity = 382/384 (99.48%), Postives = 382/384 (99.48%), Query Frame = 1 

		  

Query: 56  MNSIEHRAVSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPID 115
           MNSIEHRAVSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPID
Sbjct: 1   MNSIEHRAVSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPID 60

Query: 116 NTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHV 175
           NTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHV
Sbjct: 61  NTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHV 120

Query: 176 EAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALE 235
           EAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALE
Sbjct: 121 EAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALE 180

Query: 236 LVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKH 295
           LVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKH
Sbjct: 181 LVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKH 240

Query: 296 ICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCH 355
           ICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCH
Sbjct: 241 ICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCH 300

Query: 356 KEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRK 415
           KEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRK
Sbjct: 301 KEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRK 360

Query: 416 IAGQKSYETCFGCMHNLMDPGKHS 440
           IAGQKSYETCFGCMHNLMDPG  S
Sbjct: 361 IAGQKSYETCFGCMHNLMDPGTGS 384
[Close]
BLAST of Spo20970.1 vs. NCBI nr
Match: gi|731374647|ref|XP_010667027.1| (PREDICTED: general transcription factor IIH subunit 2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 722.6 bits (1864), Expect = 4.200e-205
Identity = 351/384 (91.41%), Postives = 367/384 (95.57%), Query Frame = 1 

		  

Query: 56  MNSIEHRAVSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPID 115
           +NSIEHR V NSRGRRL RDEDEDDEDEDNDMSAWE+AYTDERSWESLQEDESGLLRPID
Sbjct: 2   INSIEHREVRNSRGRRLERDEDEDDEDEDNDMSAWERAYTDERSWESLQEDESGLLRPID 61

Query: 116 NTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHV 175
           N ++YHAQYRRRIRSISSTST+ARIQKGLIRYIYVVMDFSRAA EMDFKPSRMAVVAKHV
Sbjct: 62  NKNLYHAQYRRRIRSISSTSTTARIQKGLIRYIYVVMDFSRAAGEMDFKPSRMAVVAKHV 121

Query: 176 EAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALE 235
           EAFVREFFDQNPLSQIGLV+IKDGV+HCLTDMGGSPESHIKALM KLECSGDASLQNALE
Sbjct: 122 EAFVREFFDQNPLSQIGLVSIKDGVAHCLTDMGGSPESHIKALMNKLECSGDASLQNALE 181

Query: 236 LVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKH 295
           LVHECLNQ+PSYGHREV+ILYSALSTCDPGDIMETI KCKKSKIRCSI+GLSAEMFICKH
Sbjct: 182 LVHECLNQVPSYGHREVLILYSALSTCDPGDIMETINKCKKSKIRCSIVGLSAEMFICKH 241

Query: 296 ICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCH 355
           ICQETGGSY+IALDEFHLKELLLEHAPPPPAIAEYA+ANLIKMGFPQRAAEGVVSICVCH
Sbjct: 242 ICQETGGSYSIALDEFHLKELLLEHAPPPPAIAEYAVANLIKMGFPQRAAEGVVSICVCH 301

Query: 356 KEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRK 415
           KEAKVGAGYTCP+CKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPF+EVS  N  
Sbjct: 302 KEAKVGAGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFNEVSSSNGN 361

Query: 416 IAGQKSYETCFGCMHNLMDPGKHS 440
           I GQ+S ETCFGCMHNL + G  S
Sbjct: 362 IIGQRSLETCFGCMHNLTNSGTGS 385
[Close]
BLAST of Spo20970.1 vs. NCBI nr
Match: gi|297746227|emb|CBI16283.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 632.9 bits (1631), Expect = 4.300e-178
Identity = 301/385 (78.18%), Postives = 344/385 (89.35%), Query Frame = 1 

		  

Query: 56  MNSIEHRAVSNSRGRRLNRDEDEDDEDEDND----MSAWEKAYTDERSWESLQEDESGLL 115
           MN +EHR  ++  GRRL+ +E+E++EDED      + AWE+AY DERSWESLQEDESGLL
Sbjct: 62  MNDMEHRKTNDGEGRRLDGEEEEEEEDEDEGNGRGLDAWERAYADERSWESLQEDESGLL 121

Query: 116 RPIDNTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVV 175
           RPIDN +IYHAQYRRRIRS+ S++T+ARIQKGLIRY+Y+V+D SRAA+EMDFKPSRMAVV
Sbjct: 122 RPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLIRYLYIVVDLSRAASEMDFKPSRMAVV 181

Query: 176 AKHVEAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQ 235
           AKH+EAF+REFFDQNPLSQIGLV IKDG++ CLTD+GGSP+SH+KALM KLECSGD+SLQ
Sbjct: 182 AKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLTDLGGSPDSHVKALMGKLECSGDSSLQ 241

Query: 236 NALELVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMF 295
           NAL+LVH  LNQIPSYGHREV+ILYSALSTCDPGDIMETIQ+CKKSKIRCS++GLSAE+F
Sbjct: 242 NALDLVHGYLNQIPSYGHREVLILYSALSTCDPGDIMETIQECKKSKIRCSVIGLSAEIF 301

Query: 296 ICKHICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSI 355
           IC+H+CQETGGSY++ALDE H KELLLEHAPPPPAIAE+AIANLIKMGFPQRAAEGV+SI
Sbjct: 302 ICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGVISI 361

Query: 356 CVCHKEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSF 415
           C CHKEAKVG GYTCP+CKARVCELPTECRICGLTLVSSPHLARSYHHLFPI PFDEVS 
Sbjct: 362 CSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIPPFDEVSL 421

Query: 416 PNRKIAGQKSYETCFGCMHNLMDPG 437
                  Q+S   CFGC  +L+ PG
Sbjct: 422 SLLNNPHQRSSRACFGCQESLLIPG 446
[Close]
BLAST of Spo20970.1 vs. NCBI nr
Match: gi|225435253|ref|XP_002284994.1| (PREDICTED: general transcription factor IIH subunit 2 [Vitis vinifera])

HSP 1 Score: 632.9 bits (1631), Expect = 4.300e-178
Identity = 301/385 (78.18%), Postives = 344/385 (89.35%), Query Frame = 1 

		  

Query: 56  MNSIEHRAVSNSRGRRLNRDEDEDDEDEDND----MSAWEKAYTDERSWESLQEDESGLL 115
           MN +EHR  ++  GRRL+ +E+E++EDED      + AWE+AY DERSWESLQEDESGLL
Sbjct: 1   MNDMEHRKTNDGEGRRLDGEEEEEEEDEDEGNGRGLDAWERAYADERSWESLQEDESGLL 60

Query: 116 RPIDNTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVV 175
           RPIDN +IYHAQYRRRIRS+ S++T+ARIQKGLIRY+Y+V+D SRAA+EMDFKPSRMAVV
Sbjct: 61  RPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLIRYLYIVVDLSRAASEMDFKPSRMAVV 120

Query: 176 AKHVEAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQ 235
           AKH+EAF+REFFDQNPLSQIGLV IKDG++ CLTD+GGSP+SH+KALM KLECSGD+SLQ
Sbjct: 121 AKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLTDLGGSPDSHVKALMGKLECSGDSSLQ 180

Query: 236 NALELVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMF 295
           NAL+LVH  LNQIPSYGHREV+ILYSALSTCDPGDIMETIQ+CKKSKIRCS++GLSAE+F
Sbjct: 181 NALDLVHGYLNQIPSYGHREVLILYSALSTCDPGDIMETIQECKKSKIRCSVIGLSAEIF 240

Query: 296 ICKHICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSI 355
           IC+H+CQETGGSY++ALDE H KELLLEHAPPPPAIAE+AIANLIKMGFPQRAAEGV+SI
Sbjct: 241 ICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGVISI 300

Query: 356 CVCHKEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSF 415
           C CHKEAKVG GYTCP+CKARVCELPTECRICGLTLVSSPHLARSYHHLFPI PFDEVS 
Sbjct: 301 CSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIPPFDEVSL 360

Query: 416 PNRKIAGQKSYETCFGCMHNLMDPG 437
                  Q+S   CFGC  +L+ PG
Sbjct: 361 SLLNNPHQRSSRACFGCQESLLIPG 385
[Close]
BLAST of Spo20970.1 vs. NCBI nr
Match: gi|802551547|ref|XP_012064858.1| (PREDICTED: general transcription factor IIH subunit 2 [Jatropha curcas])

HSP 1 Score: 609.0 bits (1569), Expect = 6.700e-171
Identity = 292/376 (77.66%), Postives = 336/376 (89.36%), Query Frame = 1 

		  

Query: 64  VSNSRGRRLNRD---EDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPIDNTSIY 123
           +SNS  +RLN +   ED+D++D D D+ AWE+ YTDERSWE+LQEDESGLLRPIDN +IY
Sbjct: 1   MSNSEKKRLNGETGEEDDDEDDVDGDLDAWERTYTDERSWEALQEDESGLLRPIDNKAIY 60

Query: 124 HAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHVEAFVR 183
           HAQYRRR+R++S+T+T+ARIQKGLIR++Y+V+D SRAA EMDFKPSRM V+AKHVEAFVR
Sbjct: 61  HAQYRRRLRALSATATTARIQKGLIRFLYIVVDLSRAAGEMDFKPSRMVVIAKHVEAFVR 120

Query: 184 EFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALELVHEC 243
           EFF QNPLSQIGLV IKDGV+H LT++GGSPESHIKALM KLECSGD+SLQNAL+ V   
Sbjct: 121 EFFYQNPLSQIGLVTIKDGVAHSLTELGGSPESHIKALMGKLECSGDSSLQNALDFVRVY 180

Query: 244 LNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKHICQET 303
           L+QIPSYGHREV+ILYSALSTCDPGDIM+TIQKCKKSKIRCS++GLSAEMFICKH+C+ET
Sbjct: 181 LDQIPSYGHREVLILYSALSTCDPGDIMDTIQKCKKSKIRCSVIGLSAEMFICKHLCRET 240

Query: 304 GGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCHKEAKV 363
           GG Y++A+DE H KEL+LEHAPPPPAIAE+AIANLIKMGFPQRAAEG VSIC CHKEAKV
Sbjct: 241 GGLYSVAMDEGHFKELILEHAPPPPAIAEFAIANLIKMGFPQRAAEGSVSICSCHKEAKV 300

Query: 364 GAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRKIAGQK 423
           G GY CP+CKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVS    ++   K
Sbjct: 301 GEGYICPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSLRQNEL-HNK 360

Query: 424 SYETCFGCMHNLMDPG 437
             +TCFGC  NL++PG
Sbjct: 361 LPKTCFGCQQNLVNPG 375
[Close]
BLAST of Spo20970.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPZ9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_154630 PE=4 SV=1)

HSP 1 Score: 775.8 bits (2002), Expect = 2.900e-221
Identity = 382/384 (99.48%), Postives = 382/384 (99.48%), Query Frame = 1 

		  

Query: 56  MNSIEHRAVSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPID 115
           MNSIEHRAVSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPID
Sbjct: 1   MNSIEHRAVSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPID 60

Query: 116 NTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHV 175
           NTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHV
Sbjct: 61  NTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHV 120

Query: 176 EAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALE 235
           EAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALE
Sbjct: 121 EAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALE 180

Query: 236 LVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKH 295
           LVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKH
Sbjct: 181 LVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKH 240

Query: 296 ICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCH 355
           ICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCH
Sbjct: 241 ICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCH 300

Query: 356 KEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRK 415
           KEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRK
Sbjct: 301 KEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRK 360

Query: 416 IAGQKSYETCFGCMHNLMDPGKHS 440
           IAGQKSYETCFGCMHNLMDPG  S
Sbjct: 361 IAGQKSYETCFGCMHNLMDPGTGS 384
[Close]
BLAST of Spo20970.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B777_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_006170 PE=4 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 2.900e-205
Identity = 351/384 (91.41%), Postives = 367/384 (95.57%), Query Frame = 1 

		  

Query: 56  MNSIEHRAVSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPID 115
           +NSIEHR V NSRGRRL RDEDEDDEDEDNDMSAWE+AYTDERSWESLQEDESGLLRPID
Sbjct: 2   INSIEHREVRNSRGRRLERDEDEDDEDEDNDMSAWERAYTDERSWESLQEDESGLLRPID 61

Query: 116 NTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHV 175
           N ++YHAQYRRRIRSISSTST+ARIQKGLIRYIYVVMDFSRAA EMDFKPSRMAVVAKHV
Sbjct: 62  NKNLYHAQYRRRIRSISSTSTTARIQKGLIRYIYVVMDFSRAAGEMDFKPSRMAVVAKHV 121

Query: 176 EAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALE 235
           EAFVREFFDQNPLSQIGLV+IKDGV+HCLTDMGGSPESHIKALM KLECSGDASLQNALE
Sbjct: 122 EAFVREFFDQNPLSQIGLVSIKDGVAHCLTDMGGSPESHIKALMNKLECSGDASLQNALE 181

Query: 236 LVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKH 295
           LVHECLNQ+PSYGHREV+ILYSALSTCDPGDIMETI KCKKSKIRCSI+GLSAEMFICKH
Sbjct: 182 LVHECLNQVPSYGHREVLILYSALSTCDPGDIMETINKCKKSKIRCSIVGLSAEMFICKH 241

Query: 296 ICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCH 355
           ICQETGGSY+IALDEFHLKELLLEHAPPPPAIAEYA+ANLIKMGFPQRAAEGVVSICVCH
Sbjct: 242 ICQETGGSYSIALDEFHLKELLLEHAPPPPAIAEYAVANLIKMGFPQRAAEGVVSICVCH 301

Query: 356 KEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRK 415
           KEAKVGAGYTCP+CKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPF+EVS  N  
Sbjct: 302 KEAKVGAGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFNEVSSSNGN 361

Query: 416 IAGQKSYETCFGCMHNLMDPGKHS 440
           I GQ+S ETCFGCMHNL + G  S
Sbjct: 362 IIGQRSLETCFGCMHNLTNSGTGS 385
[Close]
BLAST of Spo20970.1 vs. UniProtKB/TrEMBL
Match: F6GTZ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g03170 PE=4 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 3.000e-178
Identity = 301/385 (78.18%), Postives = 344/385 (89.35%), Query Frame = 1 

		  

Query: 56  MNSIEHRAVSNSRGRRLNRDEDEDDEDEDND----MSAWEKAYTDERSWESLQEDESGLL 115
           MN +EHR  ++  GRRL+ +E+E++EDED      + AWE+AY DERSWESLQEDESGLL
Sbjct: 1   MNDMEHRKTNDGEGRRLDGEEEEEEEDEDEGNGRGLDAWERAYADERSWESLQEDESGLL 60

Query: 116 RPIDNTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVV 175
           RPIDN +IYHAQYRRRIRS+ S++T+ARIQKGLIRY+Y+V+D SRAA+EMDFKPSRMAVV
Sbjct: 61  RPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLIRYLYIVVDLSRAASEMDFKPSRMAVV 120

Query: 176 AKHVEAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQ 235
           AKH+EAF+REFFDQNPLSQIGLV IKDG++ CLTD+GGSP+SH+KALM KLECSGD+SLQ
Sbjct: 121 AKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLTDLGGSPDSHVKALMGKLECSGDSSLQ 180

Query: 236 NALELVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMF 295
           NAL+LVH  LNQIPSYGHREV+ILYSALSTCDPGDIMETIQ+CKKSKIRCS++GLSAE+F
Sbjct: 181 NALDLVHGYLNQIPSYGHREVLILYSALSTCDPGDIMETIQECKKSKIRCSVIGLSAEIF 240

Query: 296 ICKHICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSI 355
           IC+H+CQETGGSY++ALDE H KELLLEHAPPPPAIAE+AIANLIKMGFPQRAAEGV+SI
Sbjct: 241 ICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGVISI 300

Query: 356 CVCHKEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSF 415
           C CHKEAKVG GYTCP+CKARVCELPTECRICGLTLVSSPHLARSYHHLFPI PFDEVS 
Sbjct: 301 CSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIPPFDEVSL 360

Query: 416 PNRKIAGQKSYETCFGCMHNLMDPG 437
                  Q+S   CFGC  +L+ PG
Sbjct: 361 SLLNNPHQRSSRACFGCQESLLIPG 385
[Close]
BLAST of Spo20970.1 vs. UniProtKB/TrEMBL
Match: A0A061GUH7_THECC (General transcription factor II H2 isoform 1 OS=Theobroma cacao GN=TCM_041075 PE=4 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 3.900e-170
Identity = 285/375 (76.00%), Postives = 333/375 (88.80%), Query Frame = 1 

		  

Query: 64  VSNSRGRRLNRDEDEDDEDE--DNDMSAWEKAYTDERSWESLQEDESGLLRPIDNTSIYH 123
           ++N   RR+N   +EDD+++  + D+ AWE+ YTDERSWESLQEDESGLLRPIDN ++YH
Sbjct: 1   MNNGGARRMNGGGEEDDDEDYVNGDLDAWERTYTDERSWESLQEDESGLLRPIDNKALYH 60

Query: 124 AQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHVEAFVRE 183
           +QYRRR+RS+SST+T+ARIQKGLIRY+Y+V+D SRAA+E DF+PSR+ V+AKHVEAF+RE
Sbjct: 61  SQYRRRLRSLSSTATAARIQKGLIRYLYLVIDLSRAASETDFRPSRIVVIAKHVEAFIRE 120

Query: 184 FFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALELVHECL 243
           FFDQNPLSQ+GL+ IKDGV+ CLTD+GGSPESHIKALM KLECSGD+SLQNAL+LV   L
Sbjct: 121 FFDQNPLSQVGLLTIKDGVAQCLTDLGGSPESHIKALMNKLECSGDSSLQNALDLVDGYL 180

Query: 244 NQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKHICQETG 303
           NQIPSYGHREV+ILY+ALSTCDPGDIMETIQKCKKSKIRCS++GL+AEMFICKH+CQETG
Sbjct: 181 NQIPSYGHREVLILYAALSTCDPGDIMETIQKCKKSKIRCSVIGLAAEMFICKHLCQETG 240

Query: 304 GSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCHKEAKVG 363
           G+Y++ALDE H KEL+LEHAPPPPAIAE+A ANLIKMGFPQRAAEG +SIC CHKEAKVG
Sbjct: 241 GTYSVALDESHFKELILEHAPPPPAIAEFATANLIKMGFPQRAAEGSISICSCHKEAKVG 300

Query: 364 AGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRKIAGQKS 423
           AGYTCP+CKARVCELPTECRICGLTLVSSPHLARSYHHLFPI PFDEV   +      K 
Sbjct: 301 AGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIAPFDEVPPFSLNDPNHKL 360

Query: 424 YETCFGCMHNLMDPG 437
              CFGC  +L++PG
Sbjct: 361 QRNCFGCQQSLLNPG 375
[Close]
BLAST of Spo20970.1 vs. UniProtKB/TrEMBL
Match: A0A0D2S1Q4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G120700 PE=4 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 6.700e-170
Identity = 283/375 (75.47%), Postives = 334/375 (89.07%), Query Frame = 1 

		  

Query: 64  VSNSRGRRLN--RDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPIDNTSIYH 123
           ++N  GRR+N   +ED+D++D + D+ AWE+ YTDERSWESLQEDESG+LRPIDN ++YH
Sbjct: 1   MNNGAGRRINGGAEEDDDEDDVNGDLDAWERTYTDERSWESLQEDESGMLRPIDNQALYH 60

Query: 124 AQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHVEAFVRE 183
           +QYRRR+RS+S  ST+ARIQKGLIRY+Y+V+D SRAA+EMDF+PSR+AV+AKHVE F+RE
Sbjct: 61  SQYRRRLRSLS--STAARIQKGLIRYLYIVIDLSRAASEMDFRPSRIAVIAKHVETFIRE 120

Query: 184 FFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALELVHECL 243
           FF QNPLSQ+G+V IKDGV+HCLTD+GGSPESHI ALMKKLECSGD+SLQNAL+LV   L
Sbjct: 121 FFYQNPLSQVGIVTIKDGVAHCLTDIGGSPESHINALMKKLECSGDSSLQNALDLVDGYL 180

Query: 244 NQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKHICQETG 303
           NQIPSYGHREV+ILYSALSTCDPGDIM+TIQKC+KSKIRCS++GL+AEMFICKH+CQETG
Sbjct: 181 NQIPSYGHREVLILYSALSTCDPGDIMDTIQKCRKSKIRCSVIGLAAEMFICKHLCQETG 240

Query: 304 GSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCHKEAKVG 363
           G+Y++ALDE H KEL+LEHAPPPPAIAE+A+ANLIKMGFPQRAAEG +SIC CHKEAKVG
Sbjct: 241 GTYSVALDESHFKELILEHAPPPPAIAEFAVANLIKMGFPQRAAEGSISICSCHKEAKVG 300

Query: 364 AGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRKIAGQKS 423
           AGYTCP+CKAR CELPTEC +CGLTLVSSPHLARSYHHLFPI PFDEV+  +      K 
Sbjct: 301 AGYTCPRCKARACELPTECCVCGLTLVSSPHLARSYHHLFPIAPFDEVTSSHLNNPNCKL 360

Query: 424 YETCFGCMHNLMDPG 437
              CFGC  +L+DPG
Sbjct: 361 QRNCFGCQQSLLDPG 373
[Close]
BLAST of Spo20970.1 vs. ExPASy Swiss-Prot
Match: TF2H2_ARATH (General transcription factor IIH subunit 2 OS=Arabidopsis thaliana GN=GTF2H2 PE=1 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 2.200e-166
Identity = 279/374 (74.60%), Postives = 328/374 (87.70%), Query Frame = 1 

		  

Query: 64  VSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPIDNTSIYHAQ 123
           +SN R R  +  E+EDDED +  +  WE+AY D+RSWE LQEDESGLLRPIDN++IYHAQ
Sbjct: 1   MSNQRKRSNDEREEEDDEDAEG-IGEWERAYVDDRSWEELQEDESGLLRPIDNSAIYHAQ 60

Query: 124 YRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHVEAFVREFF 183
           YRRR+R +S+ +   RIQKGLIRY+Y+V+DFSRAAAEMDF+PSRMA++AKHVEAF+REFF
Sbjct: 61  YRRRLRMLSAAAAGTRIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAIMAKHVEAFIREFF 120

Query: 184 DQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALELVHECLNQ 243
           DQNPLSQIGLV+IK+GV+H LTD+GGSPE+HIKALM KLE  GD+SLQNALELVHE LNQ
Sbjct: 121 DQNPLSQIGLVSIKNGVAHTLTDLGGSPETHIKALMGKLEALGDSSLQNALELVHEHLNQ 180

Query: 244 IPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKHICQETGGS 303
           +PSYGHREV+ILYSAL TCDPGDIMETIQKCKKSK+RCS++GLSAEMFICKH+CQETGG 
Sbjct: 181 VPSYGHREVLILYSALCTCDPGDIMETIQKCKKSKLRCSVIGLSAEMFICKHLCQETGGL 240

Query: 304 YAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCHKEAKVGAG 363
           Y++A+DE HLK+LLLEHAPPPPAIAE+AIANLIKMGFPQRAAEG ++IC CHKE K+GAG
Sbjct: 241 YSVAVDEVHLKDLLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGSMAICSCHKEVKIGAG 300

Query: 364 YTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEV-SFPNRKIAGQKSY 423
           Y CP+CKARVC+LPTEC ICGLTLVSSPHLARSYHHLFPI PFDEV +  +     +K  
Sbjct: 301 YMCPRCKARVCDLPTECTICGLTLVSSPHLARSYHHLFPIAPFDEVPALSSLNDNRRKLG 360

Query: 424 ETCFGCMHNLMDPG 437
           ++CFGC  +L+  G
Sbjct: 361 KSCFGCQQSLIGAG 373
[Close]
BLAST of Spo20970.1 vs. ExPASy Swiss-Prot
Match: TF2H2_BOVIN (General transcription factor IIH subunit 2 OS=Bos taurus GN=GTF2H2 PE=2 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.100e-77
Identity = 154/376 (40.96%), Postives = 229/376 (60.90%), Query Frame = 1 

		  

Query: 81  EDEDNDMSAWEKAYTDERSWESLQEDESGLLRPIDNTSIYHAQYRRRIRSISSTSTSARI 140
           ++E      WE  Y  ER+WE L+EDESG L+      ++ A+ +R            ++
Sbjct: 2   DEEPERTKRWEGGY--ERTWEILKEDESGSLKATIEDILFKAKRKRVFEH------HGQV 61

Query: 141 QKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHVEAFVREFFDQNPLSQIGLVAIKDGV 200
           + G++R++YVV+D SR   + D KP+R+    K +E FV E+FDQNP+SQIG++  K   
Sbjct: 62  RLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKR 121

Query: 201 SHCLTDMGGSPESHIKALMKKLE--CSGDASLQNALELVHECLNQIPSYGHREVIILYSA 260
           +  LT++ G+P  HI +L K ++  C G+ SL N+L +  + L  +P +  REV+I++S+
Sbjct: 122 AEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSS 181

Query: 261 LSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKHICQETGGSYAIALDEFHLKELLL 320
           L+TCDP +I + I+  K +KIR SI+GLSAE+ +C  + +ETGG+Y + LDE H KELL 
Sbjct: 182 LTTCDPSNIYDLIKSLKAAKIRVSIIGLSAEVRVCTALARETGGTYHVILDESHYKELLT 241

Query: 321 EHAPPPPAIAEYAIANLIKMGFPQRA------AEGVVSICVCHKEAKVG-----AGYTCP 380
            H  PPPA +  +  +LI+MGFPQ         +   S  + H ++         GY CP
Sbjct: 242 HHVSPPPA-SSNSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDSNTEPGLTLGGYFCP 301

Query: 381 KCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRKIAGQKSYETCFG 440
           +C+A+ CELP EC+ICGLTLVS+PHLARSYHHLFP+  F E+  P  +  G++    C+ 
Sbjct: 302 QCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEI--PLEEHNGER---FCYA 361

Query: 441 CMHNLMDPGKHSYISS 444
           C   L D  +H Y+ S
Sbjct: 362 CQGELKD--QHVYVCS 361
[Close]
BLAST of Spo20970.1 vs. ExPASy Swiss-Prot
Match: TF2H2_HUMAN (General transcription factor IIH subunit 2 OS=Homo sapiens GN=GTF2H2 PE=1 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.100e-77
Identity = 153/374 (40.91%), Postives = 228/374 (60.96%), Query Frame = 1 

		  

Query: 81  EDEDNDMSAWEKAYTDERSWESLQEDESGLLRPIDNTSIYHAQYRRRIRSISSTSTSARI 140
           ++E      WE  Y  ER+WE L+EDESG L+      ++ A+ +R            ++
Sbjct: 2   DEEPERTKRWEGGY--ERTWEILKEDESGSLKATIEDILFKAKRKRVFEH------HGQV 61

Query: 141 QKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHVEAFVREFFDQNPLSQIGLVAIKDGV 200
           + G++R++YVV+D SR   + D KP+R+    K +E FV E+FDQNP+SQIG++  K   
Sbjct: 62  RLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKR 121

Query: 201 SHCLTDMGGSPESHIKALMKKLE--CSGDASLQNALELVHECLNQIPSYGHREVIILYSA 260
           +  LT++ G+P  HI +L K ++  C G+ SL N+L +  + L  +P +  REV+I++S+
Sbjct: 122 AEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSS 181

Query: 261 LSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKHICQETGGSYAIALDEFHLKELLL 320
           L+TCDP +I + I+  K +KIR S++GLSAE+ +C  + +ETGG+Y + LDE H KELL 
Sbjct: 182 LTTCDPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLT 241

Query: 321 EHAPPPPAIAEYAIANLIKMGFPQRA------AEGVVSICVCHKEAKVG-----AGYTCP 380
            H  PPPA +  +  +LI+MGFPQ         +   S  + H +          GY CP
Sbjct: 242 HHVSPPPA-SSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCP 301

Query: 381 KCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRKIAGQKSYETCFG 440
           +C+A+ CELP EC+ICGLTLVS+PHLARSYHHLFP+  F E+  P  +  G++    C+G
Sbjct: 302 QCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEI--PLEEYNGER---FCYG 359

Query: 441 CMHNLMDPGKHSYI 442
           C   L D  +H Y+
Sbjct: 362 CQGELKD--QHVYV 359
[Close]
BLAST of Spo20970.1 vs. ExPASy Swiss-Prot
Match: TF2H2_MOUSE (General transcription factor IIH subunit 2 OS=Mus musculus GN=Gtf2h2 PE=1 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 3.300e-77
Identity = 152/375 (40.53%), Postives = 226/375 (60.27%), Query Frame = 1 

		  

Query: 81  EDEDNDMSAWEKAYTDERSWESLQEDESGLLRPIDNTSIYHAQYRRRIRSISSTSTSARI 140
           ++E      WE  Y  ER+WE L+EDE+G L+      ++ A+ +R            ++
Sbjct: 2   DEEPERTKRWEGGY--ERTWEILKEDETGSLKATIEDILFKAKRKRVFEH------HGQV 61

Query: 141 QKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHVEAFVREFFDQNPLSQIGLVAIKDGV 200
           + G++R++YVV+D SR   + D KP+R+    K +E FV E+FDQNP+SQIG++  K   
Sbjct: 62  RLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKR 121

Query: 201 SHCLTDMGGSPESHIKALMKKLE--CSGDASLQNALELVHECLNQIPSYGHREVIILYSA 260
           +  LT++ G+P  HI +L K ++  C G+ SL N+L +  + L  +P +  REV+I++S+
Sbjct: 122 AEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSS 181

Query: 261 LSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKHICQETGGSYAIALDEFHLKELLL 320
           L+TCDP +I + I+  K +KIR S++GLSAE+ +C  + +ETGG+Y + LDE H KELL 
Sbjct: 182 LTTCDPSNIYDLIKTLKTAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDETHYKELLA 241

Query: 321 EHAPPPPAIAEYAIANLIKMGFPQRA------AEGVVSICVCH------KEAKVGAGYTC 380
            H  PPPA +  +  +LI+MGFPQ         +   S  + H      +      GY C
Sbjct: 242 HHVSPPPA-SSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDNNSTEPGLTLGGYFC 301

Query: 381 PKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRKIAGQKSYETCF 440
           P+C+A+ CELP EC+ICGLTLVS+PHLARSYHHLFP+  F E+S     +   K    C+
Sbjct: 302 PQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIS-----LEEYKGERFCY 360

Query: 441 GCMHNLMDPGKHSYI 442
           GC   L D  +H Y+
Sbjct: 362 GCQGELKD--QHVYV 360
[Close]
BLAST of Spo20970.1 vs. ExPASy Swiss-Prot
Match: TF2H2_RAT (General transcription factor IIH subunit 2 OS=Rattus norvegicus GN=Gtf2h2 PE=1 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 4.300e-77
Identity = 153/375 (40.80%), Postives = 228/375 (60.80%), Query Frame = 1 

		  

Query: 81  EDEDNDMSAWEKAYTDERSWESLQEDESGLLRPIDNTSIYHAQYRRRIRSISSTSTSARI 140
           ++E      WE  Y  ER+WE L+EDESG L+      ++ A+ +R            ++
Sbjct: 2   DEEPERTKRWEGGY--ERTWEILKEDESGSLKATIEDILFKAKRKRVFEH------HGQV 61

Query: 141 QKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHVEAFVREFFDQNPLSQIGLVAIKDGV 200
           + G++R++YVV+D SR   + D KP+R+    K +E FV E+FDQNP+SQIG++  K   
Sbjct: 62  RLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKR 121

Query: 201 SHCLTDMGGSPESHIKALMKKLE--CSGDASLQNALELVHECLNQIPSYGHREVIILYSA 260
           +  LT++ G+P  HI +L K ++  C G+ SL N+L +  + L  +P +  REV+I++S+
Sbjct: 122 AEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSS 181

Query: 261 LSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKHICQETGGSYAIALDEFHLKELLL 320
           L+TCDP +I + I+  K +KIR S++GLSAE+ +C  + +ETGG+Y + LDE H KELL 
Sbjct: 182 LTTCDPSNIYDLIKTLKTAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDETHYKELLA 241

Query: 321 EHAPPPPAIAEYAIANLIKMGFPQRA------AEGVVSICVCH------KEAKVGAGYTC 380
            H  PPPA +  +  +LI+MGFPQ         +   S  + H      +      GY C
Sbjct: 242 RHVSPPPA-SSGSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDNNSTEPGLTLGGYFC 301

Query: 381 PKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRKIAGQKSYETCF 440
           P+C+A+ CELP EC+ICGLTLVS+PHLARSYHHLFP+  F E+  P  +  G++    C+
Sbjct: 302 PQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEI--PLEEYKGER---FCY 360

Query: 441 GCMHNLMDPGKHSYI 442
           GC   L D  +H Y+
Sbjct: 362 GCQGELKD--QHVYV 360
[Close]
BLAST of Spo20970.1 vs. TAIR (Arabidopsis)
Match: AT1G05055.1 (general transcription factor II H2)

HSP 1 Score: 586.6 bits (1511), Expect = 1.300e-167
Identity = 279/374 (74.60%), Postives = 328/374 (87.70%), Query Frame = 1 

		  

Query: 64  VSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPIDNTSIYHAQ 123
           +SN R R  +  E+EDDED +  +  WE+AY D+RSWE LQEDESGLLRPIDN++IYHAQ
Sbjct: 1   MSNQRKRSNDEREEEDDEDAEG-IGEWERAYVDDRSWEELQEDESGLLRPIDNSAIYHAQ 60

Query: 124 YRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHVEAFVREFF 183
           YRRR+R +S+ +   RIQKGLIRY+Y+V+DFSRAAAEMDF+PSRMA++AKHVEAF+REFF
Sbjct: 61  YRRRLRMLSAAAAGTRIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAIMAKHVEAFIREFF 120

Query: 184 DQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALELVHECLNQ 243
           DQNPLSQIGLV+IK+GV+H LTD+GGSPE+HIKALM KLE  GD+SLQNALELVHE LNQ
Sbjct: 121 DQNPLSQIGLVSIKNGVAHTLTDLGGSPETHIKALMGKLEALGDSSLQNALELVHEHLNQ 180

Query: 244 IPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKHICQETGGS 303
           +PSYGHREV+ILYSAL TCDPGDIMETIQKCKKSK+RCS++GLSAEMFICKH+CQETGG 
Sbjct: 181 VPSYGHREVLILYSALCTCDPGDIMETIQKCKKSKLRCSVIGLSAEMFICKHLCQETGGL 240

Query: 304 YAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCHKEAKVGAG 363
           Y++A+DE HLK+LLLEHAPPPPAIAE+AIANLIKMGFPQRAAEG ++IC CHKE K+GAG
Sbjct: 241 YSVAVDEVHLKDLLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGSMAICSCHKEVKIGAG 300

Query: 364 YTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEV-SFPNRKIAGQKSY 423
           Y CP+CKARVC+LPTEC ICGLTLVSSPHLARSYHHLFPI PFDEV +  +     +K  
Sbjct: 301 YMCPRCKARVCDLPTECTICGLTLVSSPHLARSYHHLFPIAPFDEVPALSSLNDNRRKLG 360

Query: 424 ETCFGCMHNLMDPG 437
           ++CFGC  +L+  G
Sbjct: 361 KSCFGCQQSLIGAG 373
The following BLAST results are available for this feature:
BLAST of Spo20970.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902179308|gb|KNA09327.1|4.1e-22199.4hypothetical protein SOVF_1546... [more]
gi|731374647|ref|XP_010667027.1|4.2e-20591.4PREDICTED: general transcripti... [more]
gi|297746227|emb|CBI16283.3|4.3e-17878.1unnamed protein product [Vitis... [more]
gi|225435253|ref|XP_002284994.1|4.3e-17878.1PREDICTED: general transcripti... [more]
gi|802551547|ref|XP_012064858.1|6.7e-17177.6PREDICTED: general transcripti... [more]
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BLAST of Spo20970.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QPZ9_SPIOL2.9e-22199.4Uncharacterized protein OS=Spi... [more]
A0A0J8B777_BETVU2.9e-20591.4Uncharacterized protein OS=Bet... [more]
F6GTZ1_VITVI3.0e-17878.1Putative uncharacterized prote... [more]
A0A061GUH7_THECC3.9e-17076.0General transcription factor I... [more]
A0A0D2S1Q4_GOSRA6.7e-17075.4Uncharacterized protein OS=Gos... [more]
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BLAST of Spo20970.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
TF2H2_ARATH2.2e-16674.6General transcription factor I... [more]
TF2H2_BOVIN1.1e-7740.9General transcription factor I... [more]
TF2H2_HUMAN1.1e-7740.9General transcription factor I... [more]
TF2H2_MOUSE3.3e-7740.5General transcription factor I... [more]
TF2H2_RAT4.3e-7740.8General transcription factor I... [more]
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BLAST of Spo20970.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G05055.11.3e-16774.6general transcription factor I... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 145..321
score: 3.
IPR002035von Willebrand factor, type APROFILEPS50234VWFAcoord: 147..287
score: 9
IPR002035von Willebrand factor, type AunknownSSF53300vWA-likecoord: 143..312
score: 3.06
IPR007198Ssl1-likePFAMPF04056Ssl1coord: 151..341
score: 2.6
IPR012170TFIIH subunit Ssl1/p44PIRPIRSF015919TFIIH_SSL1coord: 50..445
score: 5.5E
IPR012170TFIIH subunit Ssl1/p44PANTHERPTHR12695:SF2GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2coord: 51..432
score: 2.0E
IPR012170TFIIH subunit Ssl1/p44TIGRFAMsTIGR00622TIGR00622coord: 363..436
score: 2.5
NoneNo IPR availablePANTHERPTHR12695GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2coord: 51..432
score: 2.0E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006289 nucleotide-excision repair
biological_process GO:0042742 defense response to bacterium
biological_process GO:0034968 histone lysine methylation
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0006534 cysteine metabolic process
biological_process GO:0006423 cysteinyl-tRNA aminoacylation
biological_process GO:0007275 multicellular organism development
biological_process GO:0006468 protein phosphorylation
biological_process GO:0048544 recognition of pollen
biological_process GO:0009089 lysine biosynthetic process via diaminopimelate
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0006396 RNA processing
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0043044 ATP-dependent chromatin remodeling
biological_process GO:0006508 proteolysis
biological_process GO:0051301 cell division
biological_process GO:0048825 cotyledon development
biological_process GO:0009880 embryonic pattern specification
biological_process GO:0010072 primary shoot apical meristem specification
biological_process GO:0010564 regulation of cell cycle process
biological_process GO:0045595 regulation of cell differentiation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0007062 sister chromatid cohesion
biological_process GO:0006099 tricarboxylic acid cycle
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0006357 regulation of transcription by RNA polymerase II
biological_process GO:0006436 tryptophanyl-tRNA aminoacylation
biological_process GO:0051788 response to misfolded protein
biological_process GO:0071897 DNA biosynthetic process
biological_process GO:0006260 DNA replication
biological_process GO:0016310 phosphorylation
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006230 TMP biosynthetic process
biological_process GO:0009817 defense response to fungus, incompatible interaction
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0046686 response to cadmium ion
biological_process GO:0009407 toxin catabolic process
biological_process GO:0010431 seed maturation
biological_process GO:0009228 thiamine biosynthetic process
biological_process GO:0009229 thiamine diphosphate biosynthetic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0000373 Group II intron splicing
biological_process GO:0009409 response to cold
biological_process GO:0000478 endonucleolytic cleavage involved in rRNA processing
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0001510 RNA methylation
biological_process GO:0008033 tRNA processing
biological_process GO:0015976 carbon utilization
biological_process GO:0006568 tryptophan metabolic process
biological_process GO:0044237 cellular metabolic process
biological_process GO:0032259 methylation
biological_process GO:0051567 histone H3-K9 methylation
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0006275 regulation of DNA replication
biological_process GO:0009932 cell tip growth
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0006342 chromatin silencing
biological_process GO:0044205 'de novo' UMP biosynthetic process
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0006084 acetyl-CoA metabolic process
biological_process GO:0009585 red, far-red light phototransduction
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0006306 DNA methylation
biological_process GO:0006270 DNA replication initiation
biological_process GO:0006268 DNA unwinding involved in DNA replication
biological_process GO:0009790 embryo development
biological_process GO:0051726 regulation of cell cycle
biological_process GO:0042127 regulation of cell proliferation
biological_process GO:0010082 regulation of root meristem growth
biological_process GO:0008283 cell proliferation
biological_process GO:0016458 gene silencing
biological_process GO:0009987 cellular process
biological_process GO:0006281 DNA repair
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0001731 formation of translation preinitiation complex
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0015940 pantothenate biosynthetic process
biological_process GO:0009099 valine biosynthetic process
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0042176 regulation of protein catabolic process
biological_process GO:0044210 'de novo' CTP biosynthetic process
biological_process GO:0006541 glutamine metabolic process
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0006614 SRP-dependent cotranslational protein targeting to membrane
biological_process GO:0006525 arginine metabolic process
biological_process GO:0006310 DNA recombination
biological_process GO:0006433 prolyl-tRNA aminoacylation
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006348 chromatin silencing at telomere
biological_process GO:0009908 flower development
biological_process GO:0016573 histone acetylation
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0042026 protein refolding
biological_process GO:0006950 response to stress
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0001172 transcription, RNA-templated
biological_process GO:0006364 rRNA processing
biological_process GO:0006606 protein import into nucleus
biological_process GO:0050826 response to freezing
biological_process GO:0010074 maintenance of meristem identity
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0010090 trichome morphogenesis
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0097056 selenocysteinyl-tRNA(Sec) biosynthetic process
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0048449 floral organ formation
biological_process GO:0009651 response to salt stress
biological_process GO:0034969 histone arginine methylation
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0006434 seryl-tRNA aminoacylation
biological_process GO:0035246 peptidyl-arginine N-methylation
biological_process GO:0006499 N-terminal protein myristoylation
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0048367 shoot system development
biological_process GO:0006522 alanine metabolic process
biological_process GO:0006526 arginine biosynthetic process
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0006560 proline metabolic process
biological_process GO:0010093 specification of floral organ identity
biological_process GO:0009845 seed germination
biological_process GO:0006563 L-serine metabolic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0045010 actin nucleation
biological_process GO:0016571 histone methylation
biological_process GO:0019915 lipid storage
biological_process GO:0009933 meristem structural organization
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0008152 metabolic process
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0009640 photomorphogenesis
biological_process GO:0043687 post-translational protein modification
biological_process GO:0010162 seed dormancy process
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0006412 translation
biological_process GO:0030422 production of siRNA involved in RNA interference
biological_process GO:0000338 protein deneddylation
biological_process GO:0016579 protein deubiquitination
biological_process GO:0016567 protein ubiquitination
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0009909 regulation of flower development
biological_process GO:0006566 threonine metabolic process
biological_process GO:0006567 threonine catabolic process
biological_process GO:0010220 positive regulation of vernalization response
biological_process GO:0006096 glycolytic process
biological_process GO:0006269 DNA replication, synthesis of RNA primer
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:2001295 malonyl-CoA biosynthetic process
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009308 amine metabolic process
biological_process GO:0009423 chorismate biosynthetic process
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0006457 protein folding
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0007155 cell adhesion
biological_process GO:0006810 transport
biological_process GO:0006544 glycine metabolic process
biological_process GO:0006094 gluconeogenesis
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0000439 core TFIIH complex
cellular_component GO:0008540 proteasome regulatory particle, base subcomplex
cellular_component GO:0005839 proteasome core complex
cellular_component GO:0005829 cytosol
cellular_component GO:0016592 mediator complex
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0048046 apoplast
cellular_component GO:0005840 ribosome
cellular_component GO:0005777 peroxisome
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0031379 RNA-directed RNA polymerase complex
cellular_component GO:0005675 holo TFIIH complex
cellular_component GO:0000502 proteasome complex
cellular_component GO:0042555 MCM complex
cellular_component GO:0042575 DNA polymerase complex
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0016589 NURF complex
cellular_component GO:0000785 chromatin
cellular_component GO:0005786 signal recognition particle, endoplasmic reticulum targeting
cellular_component GO:0000123 histone acetyltransferase complex
cellular_component GO:0016282 eukaryotic 43S preinitiation complex
cellular_component GO:0033290 eukaryotic 48S preinitiation complex
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0009343 biotin carboxylase complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005886 plasma membrane
cellular_component GO:0032040 small-subunit processome
cellular_component GO:0032991 protein-containing complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005853 eukaryotic translation elongation factor 1 complex
cellular_component GO:0016604 nuclear body
cellular_component GO:0035145 exon-exon junction complex
cellular_component GO:0016459 myosin complex
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005773 vacuole
cellular_component GO:0005618 cell wall
cellular_component GO:0005730 nucleolus
cellular_component GO:0005657 replication fork
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0005951 carbamoyl-phosphate synthase complex
cellular_component GO:0016020 membrane
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0005665 DNA-directed RNA polymerase II, core complex
cellular_component GO:0009506 plasmodesma
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0005634 nucleus
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0030659 cytoplasmic vesicle membrane
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0005643 nuclear pore
cellular_component GO:0005768 endosome
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0004402 histone acetyltransferase activity
molecular_function GO:0004386 helicase activity
molecular_function GO:0017056 structural constituent of nuclear pore
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0003678 DNA helicase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0004683 calmodulin-dependent protein kinase activity
molecular_function GO:0003968 RNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function GO:0019706 protein-cysteine S-palmitoyltransferase activity
molecular_function GO:0000035 acyl binding
molecular_function GO:0030337 DNA polymerase processivity factor activity
molecular_function GO:0004828 serine-tRNA ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004107 chorismate synthase activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0004075 biotin carboxylase activity
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0004789 thiamine-phosphate diphosphorylase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0031491 nucleosome binding
molecular_function GO:0016887 ATPase activity
molecular_function GO:0008565 protein transporter activity
molecular_function GO:0004743 pyruvate kinase activity
molecular_function GO:0030955 potassium ion binding
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0004055 argininosuccinate synthase activity
molecular_function GO:0030515 snoRNA binding
molecular_function GO:0003896 DNA primase activity
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0008972 phosphomethylpyrimidine kinase activity
molecular_function GO:0004817 cysteine-tRNA ligase activity
molecular_function GO:0008902 hydroxymethylpyrimidine kinase activity
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0004298 threonine-type endopeptidase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0005507 copper ion binding
molecular_function GO:0008131 primary amine oxidase activity
molecular_function GO:0048038 quinone binding
molecular_function GO:0004797 thymidine kinase activity
molecular_function GO:0042802 identical protein binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0003989 acetyl-CoA carboxylase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0008469 histone-arginine N-methyltransferase activity
molecular_function GO:0004827 proline-tRNA ligase activity
molecular_function GO:0016853 isomerase activity
molecular_function GO:0008236 serine-type peptidase activity
molecular_function GO:0005047 signal recognition particle binding
molecular_function GO:0030942 endoplasmic reticulum signal peptide binding
molecular_function GO:0008312 7S RNA binding
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0003883 CTP synthase activity
molecular_function GO:0030234 enzyme regulator activity
molecular_function GO:0005488 binding
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0070402 NADPH binding
molecular_function GO:0004455 ketol-acid reductoisomerase activity
molecular_function GO:0019843 rRNA binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0003697 single-stranded DNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004830 tryptophan-tRNA ligase activity
molecular_function GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity
molecular_function GO:0016905 myosin heavy chain kinase activity
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0003724 RNA helicase activity
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0008837 diaminopimelate epimerase activity
molecular_function GO:0031369 translation initiation factor binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo058490.78Barchart | Table
Spo110260.78Barchart | Table
Spo181030.77Barchart | Table
Spo089050.76Barchart | Table
Spo056010.76Barchart | Table
Spo098190.75Barchart | Table
Spo098330.75Barchart | Table
Spo049450.75Barchart | Table
Spo229610.75Barchart | Table
Spo156040.75Barchart | Table
Spo064440.74Barchart | Table
Spo148490.74Barchart | Table
Spo148710.74Barchart | Table
Spo123940.74Barchart | Table
Spo042820.74Barchart | Table
Spo233450.74Barchart | Table
Spo055890.74Barchart | Table
Spo138560.73Barchart | Table
Spo042190.73Barchart | Table
Spo166270.72Barchart | Table
Spo143170.72Barchart | Table
Spo020320.72Barchart | Table
Spo254450.72Barchart | Table
Spo131790.72Barchart | Table
Spo258860.72Barchart | Table
Spo045310.71Barchart | Table
Spo171100.71Barchart | Table
Spo251810.71Barchart | Table
Spo225920.71Barchart | Table
Spo070940.71Barchart | Table
Spo188610.71Barchart | Table
Spo261940.71Barchart | Table
Spo099970.71Barchart | Table
Spo252890.70Barchart | Table
Spo145140.70Barchart | Table
Spo259540.70Barchart | Table
Spo000070.70Barchart | Table
Spo120480.70Barchart | Table
Spo092340.70Barchart | Table
Spo159730.70Barchart | Table
Spo119430.70Barchart | Table
Spo184340.70Barchart | Table
Spo182690.70Barchart | Table
Spo151340.69Barchart | Table
Spo064870.69Barchart | Table
Spo003950.69Barchart | Table
Spo076520.69Barchart | Table
Spo185320.69Barchart | Table
Spo004820.69Barchart | Table
Spo157510.69Barchart | Table
Spo087680.69Barchart | Table
Spo055470.69Barchart | Table
Spo093530.69Barchart | Table
Spo044540.69Barchart | Table
Spo120150.69Barchart | Table
Spo010970.69Barchart | Table
Spo121950.69Barchart | Table
Spo182440.69Barchart | Table
Spo176380.69Barchart | Table
Spo057880.69Barchart | Table
Spo059080.69Barchart | Table
Spo218120.68Barchart | Table
Spo223890.68Barchart | Table
Spo252660.68Barchart | Table
Spo125980.68Barchart | Table
Spo192680.68Barchart | Table
Spo134120.68Barchart | Table
Spo136300.68Barchart | Table
Spo245320.68Barchart | Table
Spo232140.68Barchart | Table
Spo156030.68Barchart | Table
Spo001700.68Barchart | Table
Spo185250.68Barchart | Table
Spo180940.68Barchart | Table
Spo188420.68Barchart | Table
Spo168420.68Barchart | Table
Spo281520.67Barchart | Table
Spo028380.67Barchart | Table
Spo061360.67Barchart | Table
Spo065010.67Barchart | Table
Spo084880.67Barchart | Table
Spo085020.67Barchart | Table
Spo085400.67Barchart | Table
Spo120540.67Barchart | Table
Spo160970.67Barchart | Table
Spo168710.67Barchart | Table
Spo168800.67Barchart | Table
Spo173100.67Barchart | Table
Spo184490.67Barchart | Table
Spo201410.67Barchart | Table
Spo204100.67Barchart | Table
Spo219950.67Barchart | Table
Spo222000.67Barchart | Table
Spo230820.67Barchart | Table
Spo232410.67Barchart | Table
Spo256690.67Barchart | Table
Spo007800.66Barchart | Table
Spo054250.66Barchart | Table
Spo239080.66Barchart | Table
Spo095630.66Barchart | Table
Spo043110.66Barchart | Table
Spo031050.66Barchart | Table
Spo169380.66Barchart | Table
Spo171240.66Barchart | Table
Spo029120.66Barchart | Table
Spo192670.66Barchart | Table
Spo137310.66Barchart | Table
Spo137230.66Barchart | Table
Spo201610.66Barchart | Table
Spo097140.66Barchart | Table
Spo095840.66Barchart | Table
Spo002420.66Barchart | Table
Spo066810.66Barchart | Table
Spo258560.66Barchart | Table
Spo023800.66Barchart | Table
Spo223260.66Barchart | Table
Spo186470.66Barchart | Table
Spo189770.66Barchart | Table
Spo227400.66Barchart | Table
Spo194010.66Barchart | Table
Spo010960.66Barchart | Table
Spo024720.66Barchart | Table
Spo056630.65Barchart | Table
Spo084510.65Barchart | Table
Spo081600.65Barchart | Table
Spo072230.65Barchart | Table
Spo192070.65Barchart | Table
Spo071410.65Barchart | Table
Spo193250.65Barchart | Table
Spo199670.65Barchart | Table
Spo256150.65Barchart | Table
Spo060300.65Barchart | Table
Spo058460.65Barchart | Table
Spo057830.65Barchart | Table
Spo047610.65Barchart | Table
Spo139320.65Barchart | Table
Spo123110.65Barchart | Table