Spo21021 (gene) | SpinachBase

Overview


Name	Spo21021
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	(Thylakoid soluble phosphoprotein) (Precursor)
Location	chr1 : 42053988 .. 42055321 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCAACCCACTCGGGTTAGCAGGCTACACATTTTGAAAGTGGGGAATGGTAAAGGAATCCTCCCTCAAAGTGCTTGTGGGTTAGCAGGCTACACATTTTGAAAGTGGGGAATGGTAAAGGAATCCTCCCTCAAAGTGCCCTTAATGGGGAAAGCCTAACCTTTGATTGAAAGCGTAGAATCATTTCTACTAGCCCAAAACATTGTAGTGATACTATGAATTATGCGATGGTATTTCTAGTTGTGAAACCTTAGATAACTATGATGATATATTTGATGGTACTCGTAGAGCTATAGTAGTAATTAATCAATGTTTTTCTATAAAACTTCTATTCTGATCTCGCGTATTTTCATCCTTCATTTGGTAAAATAAAATATAGGTAAATACTCTTACATAAACCTAAAATATCAAACACAATTACCTCGAAGTTTGAGGTAAAACATGCTCGTGGAGTGAAGACTGACTAGGTATATTATTACTAAGAAAATCGATAGAGTAGAAAGTATTGCGTAGTACTCCCTGCCATAAAAAATACTTGTACAGTTGTACGTTTCCATGCCGAGTTACAAATAGTCGTTTCCAAAACTTTTGGGCAGTGAATACAAGCAATGGTAGAAAATTGTTGTTGCAACGATAAGAGGATGGGCCAGAGATAGCCACGTGTCAAGCACACGACCATACTCAAATGATGATGATTTATCGTAATTCTCACATAATTAAAAATTATAAAAGAAAATGAAATGAAATAAAATAAATAAAAGATAAGATCTATAAAAACCTTGTGGAAAACCCGTGGTGGAAACACTTCTATAAATAAATTCCAATTCCATAAAAAATAAAAATAAATTCCAAGGGCTGAAAAATTCACACCACCCCAAGTTGCATATATTATCCTAAGCCTTTCTCACAATATAACTGTTTATCATACATTACTTCTCCCCTTAGCAGCTTTCCTCCACCATTATCTAACTCAACAACAAAAGCTTAAGCTCAAACTCAATCAGCCCAAGGAGAACATAATGTCATCATTGCCCTTCGTGTTCGGTGCAGCGGCCAGTTCGAGAGTAGTCACAGCGGCAGCAGCCAAAGGCACGGCAGAAACCAAGCAAGAAAAGAGCTTTGTAGACTGGCTTCTTGGCAAAATAACAAAGGAAGATCAATTCTATGAAACTGACCCGATTCTTCGGGGTGGTGATGTCAAGTCGAGCGGCTCCACCAGTGGAAAGAAGGGCGGCACCACCAGTGGAAAGAAAGGCACAGTTTCAATTCCGAGCAAGAAGAAGAACGGTAATGGAGGTGTCTTTGGAGGTCTCTTTGCCAAGAAGGACTAG

mRNA sequence

ATGGGTCAACCCACTCGGGTTAGCAGGCTACACATTTTGAAAGTGGGGAATGGTAAAGGAATCCTCCCTCAAAGTGCTTGTGGGGCTGAAAAATTCACACCACCCCAAGTTGCATATATTATCCTAAGCCTTTCTCACAATATAACTGTTTATCATACATTACTTCTCCCCTTAGCAGCTTTCCTCCACCATTATCTAACTCAACAACAAAAGCTTAAGCTCAAACTCAATCAGCCCAAGGAGAACATAATGTCATCATTGCCCTTCGTGTTCGGTGCAGCGGCCAGTTCGAGAGTAGTCACAGCGGCAGCAGCCAAAGGCACGGCAGAAACCAAGCAAGAAAAGAGCTTTGTAGACTGGCTTCTTGGCAAAATAACAAAGGAAGATCAATTCTATGAAACTGACCCGATTCTTCGGGGTGGTGATGTCAAGTCGAGCGGCTCCACCAGTGGAAAGAAGGGCGGCACCACCAGTGGAAAGAAAGGCACAGTTTCAATTCCGAGCAAGAAGAAGAACGGTAATGGAGGTGTCTTTGGAGGTCTCTTTGCCAAGAAGGACTAG

Coding sequence (CDS)

ATGGGTCAACCCACTCGGGTTAGCAGGCTACACATTTTGAAAGTGGGGAATGGTAAAGGAATCCTCCCTCAAAGTGCTTGTGGGGCTGAAAAATTCACACCACCCCAAGTTGCATATATTATCCTAAGCCTTTCTCACAATATAACTGTTTATCATACATTACTTCTCCCCTTAGCAGCTTTCCTCCACCATTATCTAACTCAACAACAAAAGCTTAAGCTCAAACTCAATCAGCCCAAGGAGAACATAATGTCATCATTGCCCTTCGTGTTCGGTGCAGCGGCCAGTTCGAGAGTAGTCACAGCGGCAGCAGCCAAAGGCACGGCAGAAACCAAGCAAGAAAAGAGCTTTGTAGACTGGCTTCTTGGCAAAATAACAAAGGAAGATCAATTCTATGAAACTGACCCGATTCTTCGGGGTGGTGATGTCAAGTCGAGCGGCTCCACCAGTGGAAAGAAGGGCGGCACCACCAGTGGAAAGAAAGGCACAGTTTCAATTCCGAGCAAGAAGAAGAACGGTAATGGAGGTGTCTTTGGAGGTCTCTTTGCCAAGAAGGACTAG

Protein sequence

MGQPTRVSRLHILKVGNGKGILPQSACGAEKFTPPQVAYIILSLSHNITVYHTLLLPLAAFLHHYLTQQQKLKLKLNQPKENIMSSLPFVFGAAASSRVVTAAAAKGTAETKQEKSFVDWLLGKITKEDQFYETDPILRGGDVKSSGSTSGKKGGTTSGKKGTVSIPSKKKNGNGGVFGGLFAKKD

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo21021.1	Spo21021.1	mRNA

Homology

[Close]

BLAST of Spo21021.1 vs. NCBI nr
Match: gi|27529048|emb|CAD45559.1| (thylakoid soluble phosphoprotein [Spinacia oleracea])

HSP 1 Score: 194.9 bits (494), Expect = 1.300e-46
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1

		  
Query: 84  MSSLPFVFGAAASSRVVTAAAAKGTAETKQEKSFVDWLLGKITKEDQFYETDPILRGGDV 143
           MSSLPFVFGAAASSRVVTAAAAKGTAETKQEKSFVDWLLGKITKEDQFYETDPILRGGDV
Sbjct: 1   MSSLPFVFGAAASSRVVTAAAAKGTAETKQEKSFVDWLLGKITKEDQFYETDPILRGGDV 60

Query: 144 KSSGSTSGKKGGTTSGKKGTVSIPSKKKNGNGGVFGGLFAKKD 187
           KSSGSTSGKKGGTTSGKKGTVSIPSKKKNGNGGVFGGLFAKKD
Sbjct: 61  KSSGSTSGKKGGTTSGKKGTVSIPSKKKNGNGGVFGGLFAKKD 103

[Close]

BLAST of Spo21021.1 vs. NCBI nr
Match: gi|88192991|pdb|2FFT|A (Chain A, Nmr Structure Of Spinach Thylakoid Soluble Phosphoprotein Of 9 Kda In Sds Micelles)

HSP 1 Score: 161.4 bits (407), Expect = 1.500e-36
Identity = 83/84 (98.81%), Postives = 84/84 (100.00%), Query Frame = 1

		  
Query: 103 AAAKGTAETKQEKSFVDWLLGKITKEDQFYETDPILRGGDVKSSGSTSGKKGGTTSGKKG 162
           +AAKGTAETKQEKSFVDWLLGKITKEDQFYETDPILRGGDVKSSGSTSGKKGGTTSGKKG
Sbjct: 1   SAAKGTAETKQEKSFVDWLLGKITKEDQFYETDPILRGGDVKSSGSTSGKKGGTTSGKKG 60

Query: 163 TVSIPSKKKNGNGGVFGGLFAKKD 187
           TVSIPSKKKNGNGGVFGGLFAKKD
Sbjct: 61  TVSIPSKKKNGNGGVFGGLFAKKD 84

[Close]

BLAST of Spo21021.1 vs. NCBI nr
Match: gi|731348658|ref|XP_010685599.1| (PREDICTED: uncharacterized protein LOC104899990 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 119.4 bits (298), Expect = 6.700e-24
Identity = 66/104 (63.46%), Postives = 80/104 (76.92%), Query Frame = 1

		  
Query: 84  MSSLPFVFGAAASSRVVTAAAAKGTAETKQEKSFVDWLLGKITKEDQFYETDPILRGGDV 143
           M+SLPFVFGAAA+ RV T  A KG++   +EKSFVDWLLGK+ KEDQFYETDP+L+  + 
Sbjct: 1   MASLPFVFGAAATGRVFTTRATKGSSAPTEEKSFVDWLLGKVAKEDQFYETDPLLQKVEE 60

Query: 144 KSSGSTSGKKGGTTSGKKGTVSIPSKKKN-GNGGVFGGLFAKKD 187
           K++G        TT+G+KGTVS+ SKKK  GNGG FGGLFAKKD
Sbjct: 61  KAAG--------TTNGRKGTVSMQSKKKTGGNGGGFGGLFAKKD 96

[Close]

BLAST of Spo21021.1 vs. NCBI nr
Match: gi|255569279|ref|XP_002525607.1| (PREDICTED: uncharacterized protein LOC8276373 [Ricinus communis])

HSP 1 Score: 109.4 bits (272), Expect = 6.900e-21
Identity = 63/102 (61.76%), Postives = 74/102 (72.55%), Query Frame = 1

		  
Query: 84  MSSLPFVFGAAASSRVVTAAAAKGTAETKQEKSFVDWLLGKITKEDQFYETDPILRGGDV 143
           M+SLP  F AA + RV  A AAKG   +K+EK F+DW+LG +TKEDQFYETDPIL+  + 
Sbjct: 1   MASLPIAF-AAPTVRVYAATAAKGAGGSKEEKGFLDWVLGNLTKEDQFYETDPILKKVEE 60

Query: 144 KSSGSTSGKKGGTTSGKKGTVSIPSKKKNGNGGVFGGLFAKK 186
           KSS       GGTTSG+K +VSIP KKKNG  G FGGLFAKK
Sbjct: 61  KSS-------GGTTSGRKNSVSIPQKKKNGGFGGFGGLFAKK 94

[Close]

BLAST of Spo21021.1 vs. NCBI nr
Match: gi|802538465|ref|XP_012067962.1| (PREDICTED: uncharacterized protein LOC105630678 [Jatropha curcas])

HSP 1 Score: 99.0 bits (245), Expect = 9.400e-18
Identity = 59/104 (56.73%), Postives = 72/104 (69.23%), Query Frame = 1

		  
Query: 84  MSSLPFVFGAAASSRVVTAAAAKGTAETKQEKSFVDWLLGKITKEDQFYETDPILRGGDV 143
           M+SLP VF A    RV  A A K    +K+EKSF+DW+LG + KEDQFYETDPIL+  + 
Sbjct: 1   MASLPIVF-APPKVRVYAATATKEAGGSKEEKSFLDWVLGNLAKEDQFYETDPILKKVEE 60

Query: 144 KSSGSTSGKKGGTTSGK-KGTVSIPSKKKNGNGGVFGGLFAKKD 187
           K+S        GTTSG+ + +VSIP KKKNG  GVFGGLFAKK+
Sbjct: 61  KNS-------SGTTSGRGRNSVSIPQKKKNGGNGVFGGLFAKKE 96

[Close]

BLAST of Spo21021.1 vs. UniProtKB/TrEMBL
Match: Q8GT36_SPIOL (Thylakoid soluble phosphoprotein OS=Spinacia oleracea GN=tsp9 PE=1 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 8.700e-47
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1

		  
Query: 84  MSSLPFVFGAAASSRVVTAAAAKGTAETKQEKSFVDWLLGKITKEDQFYETDPILRGGDV 143
           MSSLPFVFGAAASSRVVTAAAAKGTAETKQEKSFVDWLLGKITKEDQFYETDPILRGGDV
Sbjct: 1   MSSLPFVFGAAASSRVVTAAAAKGTAETKQEKSFVDWLLGKITKEDQFYETDPILRGGDV 60

Query: 144 KSSGSTSGKKGGTTSGKKGTVSIPSKKKNGNGGVFGGLFAKKD 187
           KSSGSTSGKKGGTTSGKKGTVSIPSKKKNGNGGVFGGLFAKKD
Sbjct: 61  KSSGSTSGKKGGTTSGKKGTVSIPSKKKNGNGGVFGGLFAKKD 103

[Close]

BLAST of Spo21021.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BYN4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g172530 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.700e-24
Identity = 66/104 (63.46%), Postives = 80/104 (76.92%), Query Frame = 1

		  
Query: 84  MSSLPFVFGAAASSRVVTAAAAKGTAETKQEKSFVDWLLGKITKEDQFYETDPILRGGDV 143
           M+SLPFVFGAAA+ RV T  A KG++   +EKSFVDWLLGK+ KEDQFYETDP+L+  + 
Sbjct: 1   MASLPFVFGAAATGRVFTTRATKGSSAPTEEKSFVDWLLGKVAKEDQFYETDPLLQKVEE 60

Query: 144 KSSGSTSGKKGGTTSGKKGTVSIPSKKKN-GNGGVFGGLFAKKD 187
           K++G        TT+G+KGTVS+ SKKK  GNGG FGGLFAKKD
Sbjct: 61  KAAG--------TTNGRKGTVSMQSKKKTGGNGGGFGGLFAKKD 96

[Close]

BLAST of Spo21021.1 vs. UniProtKB/TrEMBL
Match: B9SHY8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0611510 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.800e-21
Identity = 63/102 (61.76%), Postives = 74/102 (72.55%), Query Frame = 1

		  
Query: 84  MSSLPFVFGAAASSRVVTAAAAKGTAETKQEKSFVDWLLGKITKEDQFYETDPILRGGDV 143
           M+SLP  F AA + RV  A AAKG   +K+EK F+DW+LG +TKEDQFYETDPIL+  + 
Sbjct: 1   MASLPIAF-AAPTVRVYAATAAKGAGGSKEEKGFLDWVLGNLTKEDQFYETDPILKKVEE 60

Query: 144 KSSGSTSGKKGGTTSGKKGTVSIPSKKKNGNGGVFGGLFAKK 186
           KSS       GGTTSG+K +VSIP KKKNG  G FGGLFAKK
Sbjct: 61  KSS-------GGTTSGRKNSVSIPQKKKNGGFGGFGGLFAKK 94

[Close]

BLAST of Spo21021.1 vs. UniProtKB/TrEMBL
Match: A0A067LGP2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08495 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.500e-18
Identity = 59/104 (56.73%), Postives = 72/104 (69.23%), Query Frame = 1

		  
Query: 84  MSSLPFVFGAAASSRVVTAAAAKGTAETKQEKSFVDWLLGKITKEDQFYETDPILRGGDV 143
           M+SLP VF A    RV  A A K    +K+EKSF+DW+LG + KEDQFYETDPIL+  + 
Sbjct: 1   MASLPIVF-APPKVRVYAATATKEAGGSKEEKSFLDWVLGNLAKEDQFYETDPILKKVEE 60

Query: 144 KSSGSTSGKKGGTTSGK-KGTVSIPSKKKNGNGGVFGGLFAKKD 187
           K+S        GTTSG+ + +VSIP KKKNG  GVFGGLFAKK+
Sbjct: 61  KNS-------SGTTSGRGRNSVSIPQKKKNGGNGVFGGLFAKKE 96

[Close]

BLAST of Spo21021.1 vs. UniProtKB/TrEMBL
Match: I6Y9K3_LINUS (Thylakoid soluble phosphoprotein OS=Linum usitatissimum GN=TSP9 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.400e-15
Identity = 59/108 (54.63%), Postives = 71/108 (65.74%), Query Frame = 1

		  
Query: 84  MSSLPFVFGAAASSRVVTAAAAKGTAETKQEKSFVDWLLGKITKEDQFYETDPILRGGDV 143
           M+SLP  F  AA  RV  A AAKG+  +K+EK   DW++G + KEDQFYETDPIL   + 
Sbjct: 1   MASLPISFTTAA--RVFAATAAKGSGGSKEEKGPWDWIVGTLIKEDQFYETDPILNKTEE 60

Query: 144 KSSGSTSGKKG-----GTTSGKKGT--VSIPSKKKNGNGGVFGGLFAK 185
           KS G T+  +G     GTTSG+KGT  VS+P KKK G    FGGLFAK
Sbjct: 61  KSGGGTTSGRGTTSGRGTTSGRKGTTTVSVPQKKKGG----FGGLFAK 102

[Close]

BLAST of Spo21021.1 vs. TAIR (Arabidopsis)
Match: AT3G47070.1 (LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope)

HSP 1 Score: 58.9 bits (141), Expect = 3.800e-9
Identity = 41/102 (40.20%), Postives = 60/102 (58.82%), Query Frame = 1

		  
Query: 83  IMSSLPFVFGAAASSRVVTAAAAKGTAETKQEKSFVDWLLGKITKEDQFYETDPILRGGD 142
           ++SSL   F A A+ RV   +   G+   K+EK+ +D++LG +TK+DQFYET+P+L+  D
Sbjct: 1   MVSSLLMSF-APATVRVYATSTKGGSGGPKEEKNPIDFVLGFMTKQDQFYETNPLLKKVD 60

Query: 143 VKSSGSTSGKKGGTTSGKKGTVSIPSKKKNGNGGVFGGLFAK 185
            K  G+T+G +G    GK    +   KK  G  G  G LF K
Sbjct: 61  EK-EGTTTGGRGTVRGGKNSAPTPVPKKSEGGFGGLGSLFKK 100

The following BLAST results are available for this feature:

BLAST of Spo21021.1 vs. NCBI nr
BLAST of Spo21021.1 vs. UniProtKB/TrEMBL
BLAST of Spo21021.1 vs. ExPASy Swiss-Prot
BLAST of Spo21021.1 vs. TAIR (Arabidopsis)

BLAST of Spo21021.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|27529048\|emb\|CAD45559.1\|	1.3e-46	100.	thylakoid soluble phosphoprote...	[more]
gi\|88192991\|pdb\|2FFT\|A	1.5e-36	98.8	Chain A, Nmr Structure Of Spin...	[more]
gi\|731348658\|ref\|XP_010685599.1\|	6.7e-24	63.4	PREDICTED: uncharacterized pro...	[more]
gi\|255569279\|ref\|XP_002525607.1\|	6.9e-21	61.7	PREDICTED: uncharacterized pro...	[more]
gi\|802538465\|ref\|XP_012067962.1\|	9.4e-18	56.7	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo21021.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
Q8GT36_SPIOL	8.7e-47	100.	Thylakoid soluble phosphoprote...	[more]
A0A0J8BYN4_BETVU	4.7e-24	63.4	Uncharacterized protein OS=Bet...	[more]
B9SHY8_RICCO	4.8e-21	61.7	Putative uncharacterized prote...	[more]
A0A067LGP2_JATCU	6.5e-18	56.7	Uncharacterized protein OS=Jat...	[more]
I6Y9K3_LINUS	1.4e-15	54.6	Thylakoid soluble phosphoprote...	[more]

BLAST of Spo21021.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo21021.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT3G47070.1	3.8e-9	40.2	LOCATED IN: thylakoid, chlorop...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021584	Thylakoid soluble phosphoprotein TSP9	PFAM	PF11493	TSP9	coord: 104..184 score: 7.8
None	No IPR available	PANTHER	PTHR36370	FAMILY NOT NAMED	coord: 93..186 score: 7.8
None	No IPR available	PANTHER	PTHR36370:SF1	SUBFAMILY NOT NAMED	coord: 93..186 score: 7.8
None	No IPR available	unknown	SSF144256	TSP9-like	coord: 104..186 score: 1.96

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0016556	mRNA modification
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0009637	response to blue light
biological_process	GO:0010218	response to far red light
biological_process	GO:0010114	response to red light
biological_process	GO:0006364	rRNA processing
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0030154	cell differentiation
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0055072	iron ion homeostasis
biological_process	GO:0010150	leaf senescence
biological_process	GO:0072593	reactive oxygen species metabolic process
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0070838	divalent metal ion transport
biological_process	GO:0030003	cellular cation homeostasis
biological_process	GO:0009657	plastid organization
biological_process	GO:0010206	photosystem II repair
biological_process	GO:0006526	arginine biosynthetic process
biological_process	GO:0006591	ornithine metabolic process
biological_process	GO:0048481	plant ovule development
biological_process	GO:0006560	proline metabolic process
biological_process	GO:0006164	purine nucleotide biosynthetic process
biological_process	GO:0009744	response to sucrose
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0010304	PSII associated light-harvesting complex II catabolic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0042793	plastid transcription
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0015979	photosynthesis
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0009409	response to cold
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0006771	riboflavin metabolic process
biological_process	GO:0019497	hexachlorocyclohexane metabolic process
biological_process	GO:0009853	photorespiration
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0006655	phosphatidylglycerol biosynthetic process
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0080167	response to karrikin
biological_process	GO:0006457	protein folding
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0009512	cytochrome b6f complex
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0016020	membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009533	chloroplast stromal thylakoid
cellular_component	GO:0031977	thylakoid lumen
cellular_component	GO:0005773	vacuole
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009348	ornithine carbamoyltransferase complex
cellular_component	GO:0009543	chloroplast thylakoid lumen
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005198	structural molecule activity
molecular_function	GO:0003779	actin binding
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0010181	FMN binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0004585	ornithine carbamoyltransferase activity
molecular_function	GO:0008685	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016597	amino acid binding
molecular_function	GO:0003993	acid phosphatase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo06031	0.80	Barchart \| Table
Spo20441	0.78	Barchart \| Table
Spo10927	0.75	Barchart \| Table
Spo24046	0.74	Barchart \| Table
Spo19908	0.73	Barchart \| Table
Spo21215	0.72	Barchart \| Table
Spo02573	0.72	Barchart \| Table
Spo10235	0.70	Barchart \| Table
Spo10373	0.70	Barchart \| Table
Spo01714	0.70	Barchart \| Table
Spo13700	0.70	Barchart \| Table
Spo12823	0.69	Barchart \| Table
Spo00121	0.69	Barchart \| Table
Spo24070	0.68	Barchart \| Table
Spo05103	0.68	Barchart \| Table
Spo07603	0.68	Barchart \| Table
Spo10285	0.68	Barchart \| Table
Spo16079	0.68	Barchart \| Table
Spo18502	0.68	Barchart \| Table
Spo01129	0.67	Barchart \| Table
Spo21593	0.67	Barchart \| Table
Spo22683	0.67	Barchart \| Table
Spo23800	0.67	Barchart \| Table
Spo09335	0.67	Barchart \| Table
Spo00357	0.66	Barchart \| Table
Spo05296	0.66	Barchart \| Table
Spo05073	0.66	Barchart \| Table
Spo11446	0.66	Barchart \| Table
Spo09448	0.66	Barchart \| Table
Spo14678	0.66	Barchart \| Table
Spo15246	0.66	Barchart \| Table
Spo00895	0.66	Barchart \| Table
Spo17860	0.66	Barchart \| Table
Spo12354	0.65	Barchart \| Table