Spo21043 (gene)

Overview
NameSpo21043
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionSmall nuclear ribonucleoprotein E
LocationSpoScf_00101 : 214750 .. 222971 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGCTAAGGCTTACCGATGTGTGTTGTGTTACCGGTTGGGGGTTCCTTTGTTCTCTGTTACGGCGCCATGTTCTGCTTGTTCCAGGGTCTTTGCGGGAGACATCTTTGGTGATCATGCGGTGTCATGTGCTGGCATCGTGGGTATTAAGCATCGACATAATGTGGTTCGGGATACCCTTGTTGATGTTTGTTATCGCTCTGGGATTCCGGCACGGAAAGAGGTTGATATTGGTCTACCTGGAGGGAACGATGGAGCTCTCCGACCAGCAGACGTGTTGCTCTACTCTTGGGACCGGGGCTGTGATGTGTTTGTTGACTTGACGGGATCATCTCCTTTGACACAATCTGGGTTGTCTGGCTTTGCTCCGGGCCGGGTTGTGACTGATGCGGCTATTCGGAAACGGGTCAAGTACGAAGCACGTTGCAGGGCCATTGGTTATGGGTTTCTTCCGTTCCCTTTCTCTTCTTTGGGGGAGCTGGATAAGGATGCTGTTGCGTTGCTGAAGCGGATTCAGAAGTTTTCCAGGACACAGGACATTGGGGCTCGTGCTGCTGCTCATATTTTCACTAGGATAGGCTTTGCTATAGCCAGGGGAGTGGGGGCCCAGATTGTATCTCGGCTTCCCACTAACTATTTGTAAAATATTTGACTTTGTTGGCATTTGATTTATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAAATAATAATAATAATAAAAATAAAATAATAATATCTTCAAGAGTTGAAGCTTGGGCCTAGATATTACGTAAGAGTAATAAGGTTTTAGTTATTTGAAAACAAAAACTAAAACAGTTTGAAGGGGAAAAAAGCCAAAAATGAAATCAGTTGTCTGTTTTTGTAAAACAGAAAACTGAAAACTGGAAATGGTGTCGAACAAGCCCTAAGCTCAAATAAGAAGTTTTAAAAGCTTGTTTAAGCTCGAGTTAGCCGGAACAATATTACTCTATAATCCTTCTTAGTAACTTAGCTCGAAGTCTCGAACAAACTAAAACCCGGCTTGAGTCGTTTCCAACAGCCTAAACGAGCGGTTTTGTTGTTGGTCGTATTTCTCTATTTCCTGGTTTTAACATTTGCAGGAGGAAGTCTTTGTCACAAGACTTGTGTCCATATTGGACACAAGTGAGTACCAATACAGAATTTGGAGTACCAATACAGAATATGTTAGTACCAATACAAATTATGTGAATACCAATAATAACACATATGACTTATATTGGTGGTATTTCTAAGTAATTTTACATTTTGGTATTGACATAGTATGTGTTGGTACTCAAGATGATTGTATTTGGATCAAGTCACTTGAGGTTTAGAAACCCTCCATTTGCAAGGGGGTAAGTTGTTGTTTTGTTGGTCGTAGTTCTTTATTTCCAGAGGTACTATTCAGGGGTTTTAGCAGCGCAGAGCAATTTCGAAACAGCAGCCATGGCGAGCACTAAAGTCCAGCGGATTATGACCCAACCTATCGTAATTTCACTGCTTCTTCTCTTCCATTCTCAATTTTCTTCTTAATTTATGGTCTAACTCATATTCTTGTTTTTTGTTTTTTCGCTGTTTTTTTCTCCGATTCTCGTATCTTCCAGAACCTGATATTCAGGTTTCTTCAAAGCGTAAGCCCCAAGCTCATTGCTACACCAAATTTCATATTTGTTGTTTATTGCTTCACATTATTCTGAATTTAATTGGTTTATTTTGGATTCAGAAAGCTCGGATTCAGATTTGGCTGTTTGAGCAGAAAGATGCGAGGATTGAAGGCCGCATAATTGTAAGTTTTTGTTAACTAATTTTATTTTATTTTTCAATAATGCTTTATTGTTGATGAAAATTAAATTTTAGGGTTCTACATGCTTGAGCTTGAGGGTTTTGTTTGTGAGTAACTCTGTGTGTATATTGATTTATTTGCTAGAAATTAGATTTTTTTTATGATTATGTAGTTGATCAGCATCTATTTTGGTACATTTCTGGATGAAATCTAATACTTCGTATATTAAATTCACCAACAAAAATAGAGAAAAAGAAATTAAGAAATTAATGTTCACTAAAATCTGGCAGGCTGAAAAGATTTTGTTCATTTGATTGAAATATGTACTATCAAGTTCGCGTAGGATCATTGAGATCTCTAGTAAACATGTTCCACATGGTTTCTCTTCTTTGATTGGTAATGGATAGGGATGACAGGGGTCCAGGACCTGTTGGACCCTACCCTACAATTAGGGTATGGGTCTTAATTTTTAAGACCCTATAGGGTAAGGGTAGGGATGGGTATAGGACGTATTGGGTAGGGTAGGGTAAGGGTCTCATTTTTTCAAACCCATATCCTACACAGACCCTACCCGTGGACCCTTATGACTCAAACCCTACCCAGACCCTAAACTAAAGCCGCTCAAATTTATGAAAACATAAAAAAGAATTATATAAAAAACAAAATCCTAAAGCCATTCACAAAATTACCTCTACTCTTCTAAAAGTAAGCTACAACTACCACTCTCTAAGTTAAAATCCTAAACGTTGTGTAGTTAGGAACTTGAATTTTGTAGTTTATGAGCTTAGTACATTAAACTGTGATGTGTTAAAGGAAAGACAATAATGGTTTTTGGAGACTAACTATTTATTTGTTTTAAATTGTCAAATTAATTGTTTGTCTTGTATTATTTTTTGCGCATTAGATATAATTATACACAAAAAATGCCGATAAAAGTTATCAAAAAAAGAGGCATCGTTGACCCACTCTAGACCCTAGACCCTACCCATACCCTACCAGATCCATAGGGTCCGGATAAGAGTCTTATAATTTTAGACCCTACAGGGTAGGGGTAGGGGTAGGGTATGGTTATACGTCAAAAATTAGGGCTCGGGTCCGGGTATTGCTAGACCCTACCCAGACCCTACCCATTGTCATCTCTAGTAATGGAGTGTATCTTCAGGTGAGTTTTACATTGGAGTTCATAACTTCATATACTTCTCTATGGATGTAATATTGGGCAATGGGATTATAGATTGTGTGAAGTTTGATTATGATGTTTGCATCTTCATTAAAGGGGGCTATGAGGCAAGAATTACTAGTGCTTTTTGATGTTGGTTTCTTCCTCAGTTATTCTACATGGCAGTGATACAACGAAGAGCAAGAAAATGAAATAAGGCATAGAAATTTTCAAAAAAAAAAAAGAATTAAAAAAAGAAACTGGGTTGTCACATGTTGAGATCCCTAAGCACACTATTTATTTCTTGGATATGCATTTCACGTGGGTTCTAATGTTTTGAATTGGTACATTACTCCCGCTGTACTTTATTAGGAGTCACATGTTGACCGACACACGTATTAAGGAAGGAGAGTTGAATCTAATAAAATTAATGAAGCAAGTGGGGGAGGGAGTAATAAAAAAATAGAAAAAAGATGAAGGGAAAAATATTTTAATCAAAGTAGAGAGGGAGTTTATTGTAGTGGTGGTCCCTAAAGCAAGTGGTGGGGTAGAAAAGTTACTAAAAATGAAAATATGACTTGGTGACTCCTAAATTCCTAATAAAATACGGCCGGAAATGGTAAGTGTGATTCCTAATAAAATACGGAGGGAGTATTTAGAATGTTTGATTGGATGGCCATTAGTTGTTTTGACGGACCATTATTCATCTATCCTTCTCCTTCCATCCTCCTCTACTGTTTTCTTAATAGGTGGACTACCCTTTCTCACCTTCACCACCATTCCTCTCACGTTCTTCTGTCGTCCCTCATTCTCCCTCTCATTTTTCACATCTTTCTTTTCTCCGGGTGACTGGGAAAAGACTAAACATAGGGTGTGGTCACATGTGTTAGTTTGATTATTGATTGTACTTTTCCAGTTTTTTTGATTCAAAACTGGGTGGTTAAATCGGATGATTCATGATTGTGCGAAGTAACATTATCAGGTACAAAGAACAAGGTATTGGTCTTGCCTTGGTTGATTAATGTTGGAGGTTTCAGGAGATCAGAACCCTTTTTCCTGTTGTCTTGATTTTCTTGTTATGGTGCTGTCTTGGTTTTGAAAGAAAGTTATGGTGTGGTAGTTGTAAGGGCTGATGATCTCTATAATGTTGATCTTCTTTCATTCTTTGCTATTGATATCATCTCTTCGCTGCCAGTTCCCTAAGGTTTATGCATCATTAGGTTAGGTCAATGATTCTACTTTTGCTCATTGGCCATTTTTATGGTCCGCCAAAAATGGTAGGTGTTTACTGTTTAGTAGTTTCATGAATGGGGAAAGAGTTGTGCAGTGGGCTTGTGGGGGGAGGGTAAGACAATGGTGGGTGTGGAACAGGGTAGGGGAAATTGTTAGGATCAACAACAGCTTCAGCAAGGTTGGCTTGGTTCTGATCGGGCTTCTTCTTGACCCTGCAATCTCTGGACTTGTGACCAGCCTTCCCACATTCAAAACAGTTTTCCTTAAACTTATACTTCTGAATTTTCCCCTTGAGGCTGGAACTGACTGCCCTTCTCCTTAAACCTATCAGAACTGAAATTATCCTTAGGTTCAACAAGATTAGCTTTAGCAGAACCTGAAAACACAGATTAACCCTTATCCTTAATACGGTTCTCCTCCTCAATTTCCTGGTGACCTACGAGCTTCTCTAAGGTAACGTCTTTCTTCTTATGCGTTAACTGGTTTCTAAAATCTTTCCACGAGGGTGGCAGTTTCTCAATCAGAACAATAACAAGCGTGATATCACAAATACACAGACCCTCAGCAGTCATGGAAATGCACACATTCTCATAAGCATGAATCTGATCTATTATAGGCTTATCTTCCTTAACTTGAAAACCTAACCACTTAACGCTTAGTACCAGCATCATCAGTTCCATACTTCTTATCTAATGCATCCCAAATTTTCCTAGCATGATTATAACCCATATAAATATCAAGTAATTCATTCGACATATGATGCAACAACATGCCCTTACATGTTCTATCGTCCTTAGCAAACTTCAACTCAAAATCATGCAAATCAGATTCATCATCAGGTTTCACAACATCAGCAATAACTTACGCAACATCAATTTGTTCTAAATAAAATCGCATCCTAACAGCCCAATGTTTATAGTTCTTTCCACCAAGAGGTTCTAACTTAGACATATCAGGAATTAGGAATTTCAAATTGAAAGCCATTTTAGATTGTTAGTAATAAAACAATTAGAACAACTTATCTGGATGTTACCTTAGTTTAAAAAGGCGCAAGGCGCACTAAGACGCACAAGGGTCATGGATCCTAGGCGCAAGGCTCAGGCGCGCGCCTTTTGGATACAAGGCGCACATAATTTTCTAATAAACTTTAAATTCGGTATAGAAAAAAATTAACACAATTTATACTCAAAACAACATATTTCTATTGGAGTGCCATATTTTCTTGTCGGTTCATAAGCATTGCGTGATCACGTCCATGGAGTGCCAGAATTAGAACCTTCCATGGTAGTTACAAGCTGGAAGTATGAAAATTAACTCATATTATGCTACTTTCACTACCCAAAAAGCTAAGGTTGTAGAGATATGACCGTTGATAGGTCACATGTGTGTTCATATCATTAAAAAAAAAAAATGTAAATAAAAGATTCATGTCATCCTACTGCGCCTGAAGACTGAAGGCGCATAAGGCGCTGCGCCTTGCGCCTTACCTAAGGCGCGCGAAGGCGCCAAAGGCTGAGCCTAGGTGAGCCTTGCGCGCGCTTTTTTAAACTAAGGATGTTATGAGTACGATTTGAACAATTGTCGTGTTGTGGCCGAACCACTACTCTAAAAGACAATTCCGCGCTACCACGGCGCAGTAGAACGTTTGCGGTTGTCCTCCAAGGTTAACACGACACCAAGGATTGTGTGCACTCACAAGCCTCGATTGGAACATTTGAGGATTTGAGGGAGATAGAGAGTGAGCAGTTTCTGTGTATATGTTTATGAAAATGGAAGTGAGAGGGGGGATAATCTCGATTCTTGAAGATGTATCACCACTAATCAGTAGCTTCAAAACCGAATTCAAAAAAAAAGCAAATCATGCAAGACCATAGCTAAATGCTTAACTAATGAGAGTTACAAAACTGCAACAGCCATAAAACGGCTAGAATAGAATGGGAAGTAGTGGAGCAGTTACAACGGAACAAATTCTGTAATCAATGCCATTAGTGGGTTGATTAATTCTTCTGACCGTTACGGCAAGAATTGCTTTTCTTGCTCAAACCGCTTCTGACCGAAAAGATGGCCCTCAAAACCCACCCAACGCCCGCAAATCGCATTCCCAAGAGCCCACGGCCCGAGCTCGACCTGGCTGGCCAGCCGGCGCGTGTGCATGTGTGTTATGTGTCCACACATACCACTCTCATACTTTCTTAAACAAGTATGCACTCAAGCCCCAAATATAAACAAGGAATGAAGTTGGTATTTTATCAATGTGGGACTTTTCCCATTCCCATTTTCACTCTTTTCTTTTGCACTTTCAACAAGAATTTCTAACAATTTTATATTTACTTTTTTGTTATTTTTTTTTTCTTCTGTTTTTCCATATAGTGAAAGAGGACATAATTATGCTTGAGAAGTTGCCTAGATTTTCTCTTTTTGGTTGCCTAATAACATGTCAAAGGGTTTTGACCTGACTGATGCGGTGAAGATGAGGGAAGAGGAATCAACAATAAGAATCTTTATTTATGTTATAAACCTCTTTTTATCTTGTGAAGCCGCAGAAATTACAACATCATAGAGACTTTTGGAAGACATGGCTCTAAGATAGGGTCTATTTCAATTCTTCTACACTATGTTCTGGATAGGAAGATTTGGAGAGAAAGGGGGTAAAGGATAGGAATCAGAGGGATCCATTTTTCTTCCCCTTTTAATAGACCAAACCCCTCCATTATTGGAATGATTTCTAATGAATATGGAAGCTCACTGTTTCCCTCCCCTCCCTTTCCTCAACAAATGCTAACCAAACAAAGTGCTAGTGAAGGCTTATAATTATCTTTTATGTTTCCGTTATACTGGTATTTGCTAGAATTGTGAACGCATTTGTCAATTGCTGGACTTTTGTTGAGCTTGAGGTATCACTATTGACCAGAAATAATTCGGTAATTACTTTGATCACCTTGTAAATATGTGGAGGATGGTTGGATTGCTTGATTGTTGGAGGACTCTGTCCTATTGGCAATCTGGTGGTTGGGGTGGAGAAGTGGGGTACTGGTTTGTTGAATATAGCTGTGCAGAATTATCTCGTTTCCGCCTCAAAAAGCTTTTTACTTTGCGCATGTCAATATTTGCTGCTGAAATCCATCTCTATATGATTCTATGCCAGCTTTCTTGTGTATTGATACATTTTGATTTGCGATCTCTTCTTCAGGGCTTTGATGAGTACATGAATTTGGTTTTAGAAGATGCTGAAGAGGTGAACGTCAAAAAGAAGACCAGAAAATCACTTGGTAAATTAAGCAGCCAATGTTCGAATCTCTTTATTTGTTATTCCAACTTGATCATGTGTCCAACTTTCTAATCATGGTGCCTCTTATTTTAGGGAGGATCCTTCTGAAAGGAGACAATATTACTCTGATGATGAATACGTAAGTCCAATTTGGTTTTCTTCCCATGTTATTTTTGTTACTCGCTCTTACTTGATAACCTCCCTGTGATTTCTGTTTATCTGAGCTTTATGTTGTATTATTTGTCTGTATATCTGTTGTGCAGGGGAAAATGATACACATGGCTGATGTGCATTTGTTCAGAAGTATTGAAATTGTTGGCCTGGAAGCTATGACAAACTGCTGACCCGACATAGTAGCCTTTTATGCGTAAAACATACTGATTAATGGTGTCTGCGTCAAGCATTCCCCTCCTCTCCGTATTAGCTGAAATGTAGTTAAAGTGAATATTAAGTAGTGGATTTAATTGATTTCTTCGGTCATATGTAAAAGTATTAAGTTTCTTATGGTTGAGGCTCCTGGTGGTGCTTTCCATTTTGGGGCTTTTCTCTCTGTTCTATTAGCTTATGTTACAGAAGAGGGTATATTCAAGTGAACCCTGTTTGTGATTTATCATTTTATCCGATTGTGGAGATTATGATATCTCGTACCAATCTCAAAGCAGTCGAGTAGTTGACCCAGCAGGTGTTAATCTTCCTATGATTGTCCTCTTGATGAATGCATTTTGCTTTACTAGTAACACTAATGGGTGACCC

mRNA sequence

ATGAATGCTAAGGCTTACCGATGTGTGTTGTGTTACCGGTTGGGGGTTCCTTTGTTCTCTGTTACGGCGCCATGTTCTGCTTGTTCCAGGGTCTTTGCGGGAGACATCTTTGGTGATCATGCGGTGTCATGTGCTGGCATCGTGGGTATTAAGCATCGACATAATGTGGTTCGGGATACCCTTGTTGATGTTTGTTATCGCTCTGGGATTCCGGCACGGAAAGAGGTTGATATTGGTCTACCTGGAGGGAACGATGGAGCTCTCCGACCAGCAGACGTGTTGCTCTACTCTTGGGACCGGGGCTGTGATGTGTTTGTTGACTTGACGGGATCATCTCCTTTGACACAATCTGGGTTGTCTGGCTTTGCTCCGGGCCGGGTTGTGACTGATGCGGCTATTCGGAAACGGGTCAAGTACGAAGCACGTTGCAGGGCCATTGGTTATGGGTTTCTTCCGTTCCCTTTCTCTTCTTTGGGGGAGCTGGATAAGGATGCTGTTGCGTTGCTGAAGCGGATTCAGAAGTTTTCCAGGACACAGGACATTGGGGCTCGTGCTGCTGCTCATATTTTCACTAGGATAGGCTTTGCTATAGCCAGGGGAGTGGGGGCCCAGATTAGGTACTATTCAGGGGTTTTAGCAGCGCAGAGCAATTTCGAAACAGCAGCCATGGCGAGCACTAAAGTCCAGCGGATTATGACCCAACCTATCAACCTGATATTCAGGTTTCTTCAAAGCAAAGCTCGGATTCAGATTTGGCTGTTTGAGCAGAAAGATGCGAGGATTGAAGGCCGCATAATTGGCTTTGATGAGTACATGAATTTGGTTTTAGAAGATGCTGAAGAGGTGAACGTCAAAAAGAAGACCAGAAAATCACTTGGGAGGATCCTTCTGAAAGGAGACAATATTACTCTGATGATGAATACGTAAGTCCAATTTGGTTTTCTTCCCATGTTATTTTTGTTACTCGCTCTTACTTGATAACCTCCCTGTGATTTCTGTTTATCTGAGCTTTATGTTGTATTATTTGTCTGTATATCTGTTGTGCAGGGGAAAATGATACACATGGCTGATGTGCATTTGTTCAGAAGTATTGAAATTGTTGGCCTGGAAGCTATGACAAACTGCTGACCCGACATAGTAGCCTTTTATGCGTAAAACATACTGATTAATGGTGTCTGCGTCAAGCATTCCCCTCCTCTCCGTATTAGCTGAAATGTAGTTAAAGTGAATATTAAGTAGTGGATTTAATTGATTTCTTCGGTCATATGTAAAAGTATTAAGTTTCTTATGGTTGAGGCTCCTGGTGGTGCTTTCCATTTTGGGGCTTTTCTCTCTGTTCTATTAGCTTATGTTACAGAAGAGGGTATATTCAAGTGAACCCTGTTTGTGATTTATCATTTTATCCGATTGTGGAGATTATGATATCTCGTACCAATCTCAAAGCAGTCGAGTAGTTGACCCAGCAGGTGTTAATCTTCCTATGATTGTCCTCTTGATGAATGCATTTTGCTTTACTAGTAACACTAATGGGTGACCC

Coding sequence (CDS)

ATGAATGCTAAGGCTTACCGATGTGTGTTGTGTTACCGGTTGGGGGTTCCTTTGTTCTCTGTTACGGCGCCATGTTCTGCTTGTTCCAGGGTCTTTGCGGGAGACATCTTTGGTGATCATGCGGTGTCATGTGCTGGCATCGTGGGTATTAAGCATCGACATAATGTGGTTCGGGATACCCTTGTTGATGTTTGTTATCGCTCTGGGATTCCGGCACGGAAAGAGGTTGATATTGGTCTACCTGGAGGGAACGATGGAGCTCTCCGACCAGCAGACGTGTTGCTCTACTCTTGGGACCGGGGCTGTGATGTGTTTGTTGACTTGACGGGATCATCTCCTTTGACACAATCTGGGTTGTCTGGCTTTGCTCCGGGCCGGGTTGTGACTGATGCGGCTATTCGGAAACGGGTCAAGTACGAAGCACGTTGCAGGGCCATTGGTTATGGGTTTCTTCCGTTCCCTTTCTCTTCTTTGGGGGAGCTGGATAAGGATGCTGTTGCGTTGCTGAAGCGGATTCAGAAGTTTTCCAGGACACAGGACATTGGGGCTCGTGCTGCTGCTCATATTTTCACTAGGATAGGCTTTGCTATAGCCAGGGGAGTGGGGGCCCAGATTAGGTACTATTCAGGGGTTTTAGCAGCGCAGAGCAATTTCGAAACAGCAGCCATGGCGAGCACTAAAGTCCAGCGGATTATGACCCAACCTATCAACCTGATATTCAGGTTTCTTCAAAGCAAAGCTCGGATTCAGATTTGGCTGTTTGAGCAGAAAGATGCGAGGATTGAAGGCCGCATAATTGGCTTTGATGAGTACATGAATTTGGTTTTAGAAGATGCTGAAGAGGTGAACGTCAAAAAGAAGACCAGAAAATCACTTGGGAGGATCCTTCTGAAAGGAGACAATATTACTCTGATGATGAATACGTAA

Protein sequence

MNAKAYRCVLCYRLGVPLFSVTAPCSACSRVFAGDIFGDHAVSCAGIVGIKHRHNVVRDTLVDVCYRSGIPARKEVDIGLPGGNDGALRPADVLLYSWDRGCDVFVDLTGSSPLTQSGLSGFAPGRVVTDAAIRKRVKYEARCRAIGYGFLPFPFSSLGELDKDAVALLKRIQKFSRTQDIGARAAAHIFTRIGFAIARGVGAQIRYYSGVLAAQSNFETAAMASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLEDAEEVNVKKKTRKSLGRILLKGDNITLMMNT
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo21043.1Spo21043.1mRNA


Homology
[Close]
BLAST of Spo21043.1 vs. NCBI nr
Match: gi|902110388|gb|KNA03701.1| (hypothetical protein SOVF_206410, partial [Spinacia oleracea])

HSP 1 Score: 198.7 bits (504), Expect = 1.400e-47
Identity = 102/113 (90.27%), Postives = 104/113 (92.04%), Query Frame = 1 

		  

Query: 94  LLYSWDRGCDVFVDLTGSSPLTQSGLSGFAPGRVVTDAAIRKRVKYEARCRAIGYGFLPF 153
           LLYSWDRGCDV VDL  SSPLTQSGLSGFAPGRVVTD AIRKR +YEARCRAIGYGFLPF
Sbjct: 1   LLYSWDRGCDVCVDLMRSSPLTQSGLSGFAPGRVVTDTAIRKR-EYEARCRAIGYGFLPF 60

Query: 154 PFSSLGELDKDAVALLKRIQKFSRTQDIGARAAAHIFTRIGFAIARGVGAQIR 207
            FSSLGELDKDAVALLKRIQKFSR  DI ARAAAHIFTRIGFAIARGVGAQI+
Sbjct: 61  SFSSLGELDKDAVALLKRIQKFSRAHDIEARAAAHIFTRIGFAIARGVGAQIK 112
[Close]
BLAST of Spo21043.1 vs. NCBI nr
Match: gi|902222780|gb|KNA19264.1| (hypothetical protein SOVF_063160 [Spinacia oleracea])

HSP 1 Score: 167.5 bits (423), Expect = 3.500e-38
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1 

		  

Query: 223 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLEDAEEV 282
           MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLEDAEEV
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLEDAEEV 60

Query: 283 NVKKKTRKSLGRILLKGDNITLMMNT 309
           NVKKKTRKSLGRILLKGDNITLMMNT
Sbjct: 61  NVKKKTRKSLGRILLKGDNITLMMNT 86
[Close]
BLAST of Spo21043.1 vs. NCBI nr
Match: gi|902187043|gb|KNA10834.1| (hypothetical protein SOVF_140750 isoform A [Spinacia oleracea])

HSP 1 Score: 166.4 bits (420), Expect = 7.900e-38
Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 1 

		  

Query: 223 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLEDAEEV 282
           MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVL+DAEEV
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLDDAEEV 60

Query: 283 NVKKKTRKSLGRILLKGDNITLMMNT 309
           NVKKKTRKSLGRILLKGDNITLMMNT
Sbjct: 61  NVKKKTRKSLGRILLKGDNITLMMNT 86
[Close]
BLAST of Spo21043.1 vs. NCBI nr
Match: gi|313586495|gb|ADR71258.1| (small nuclear ribonucleoprotein E [Hevea brasiliensis])

HSP 1 Score: 164.1 bits (414), Expect = 3.900e-37
Identity = 83/86 (96.51%), Postives = 85/86 (98.84%), Query Frame = 1 

		  

Query: 223 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLEDAEEV 282
           MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKD RIEGRIIGFDEYMNLVL+DAEEV
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDMRIEGRIIGFDEYMNLVLDDAEEV 60

Query: 283 NVKKKTRKSLGRILLKGDNITLMMNT 309
           N+KKKTRKSLGRILLKGDNITLMMNT
Sbjct: 61  NIKKKTRKSLGRILLKGDNITLMMNT 86
[Close]
BLAST of Spo21043.1 vs. NCBI nr
Match: gi|566176981|ref|XP_006381848.1| (small nuclear ribonucleoprotein E [Populus trichocarpa])

HSP 1 Score: 163.7 bits (413), Expect = 5.100e-37
Identity = 83/86 (96.51%), Postives = 85/86 (98.84%), Query Frame = 1 

		  

Query: 223 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLEDAEEV 282
           MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKD RIEGRIIGFDEYMNLVLEDAEEV
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEV 60

Query: 283 NVKKKTRKSLGRILLKGDNITLMMNT 309
           N+KKK+RKSLGRILLKGDNITLMMNT
Sbjct: 61  NIKKKSRKSLGRILLKGDNITLMMNT 86
[Close]
BLAST of Spo21043.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QB16_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_206410 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.000e-47
Identity = 102/113 (90.27%), Postives = 104/113 (92.04%), Query Frame = 1 

		  

Query: 94  LLYSWDRGCDVFVDLTGSSPLTQSGLSGFAPGRVVTDAAIRKRVKYEARCRAIGYGFLPF 153
           LLYSWDRGCDV VDL  SSPLTQSGLSGFAPGRVVTD AIRKR +YEARCRAIGYGFLPF
Sbjct: 1   LLYSWDRGCDVCVDLMRSSPLTQSGLSGFAPGRVVTDTAIRKR-EYEARCRAIGYGFLPF 60

Query: 154 PFSSLGELDKDAVALLKRIQKFSRTQDIGARAAAHIFTRIGFAIARGVGAQIR 207
            FSSLGELDKDAVALLKRIQKFSR  DI ARAAAHIFTRIGFAIARGVGAQI+
Sbjct: 61  SFSSLGELDKDAVALLKRIQKFSRAHDIEARAAAHIFTRIGFAIARGVGAQIK 112
[Close]
BLAST of Spo21043.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RK17_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_063160 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.500e-38
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1 

		  

Query: 223 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLEDAEEV 282
           MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLEDAEEV
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLEDAEEV 60

Query: 283 NVKKKTRKSLGRILLKGDNITLMMNT 309
           NVKKKTRKSLGRILLKGDNITLMMNT
Sbjct: 61  NVKKKTRKSLGRILLKGDNITLMMNT 86
[Close]
BLAST of Spo21043.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QU94_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_140750 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 5.500e-38
Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 1 

		  

Query: 223 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLEDAEEV 282
           MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVL+DAEEV
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLDDAEEV 60

Query: 283 NVKKKTRKSLGRILLKGDNITLMMNT 309
           NVKKKTRKSLGRILLKGDNITLMMNT
Sbjct: 61  NVKKKTRKSLGRILLKGDNITLMMNT 86
[Close]
BLAST of Spo21043.1 vs. UniProtKB/TrEMBL
Match: I3NMM1_HEVBR (Small nuclear ribonucleoprotein E OS=Hevea brasiliensis GN=SNRPE PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.700e-37
Identity = 83/86 (96.51%), Postives = 85/86 (98.84%), Query Frame = 1 

		  

Query: 223 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLEDAEEV 282
           MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKD RIEGRIIGFDEYMNLVL+DAEEV
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDMRIEGRIIGFDEYMNLVLDDAEEV 60

Query: 283 NVKKKTRKSLGRILLKGDNITLMMNT 309
           N+KKKTRKSLGRILLKGDNITLMMNT
Sbjct: 61  NIKKKTRKSLGRILLKGDNITLMMNT 86
[Close]
BLAST of Spo21043.1 vs. UniProtKB/TrEMBL
Match: A9PB49_POPTR (Small nuclear ribonucleoprotein E OS=Populus trichocarpa GN=POPTR_0006s18800g PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.600e-37
Identity = 83/86 (96.51%), Postives = 85/86 (98.84%), Query Frame = 1 

		  

Query: 223 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLEDAEEV 282
           MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKD RIEGRIIGFDEYMNLVLEDAEEV
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEV 60

Query: 283 NVKKKTRKSLGRILLKGDNITLMMNT 309
           N+KKK+RKSLGRILLKGDNITLMMNT
Sbjct: 61  NIKKKSRKSLGRILLKGDNITLMMNT 86
[Close]
BLAST of Spo21043.1 vs. ExPASy Swiss-Prot
Match: RUXE_BOVIN (Small nuclear ribonucleoprotein E OS=Bos taurus GN=SNRPE PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 8.200e-27
Identity = 57/81 (70.37%), Postives = 73/81 (90.12%), Query Frame = 1 

		  

Query: 227 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLEDAEEVNVKK 286
           KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ + RIEG IIGFDEYMNLVL+DAEE++ K 
Sbjct: 9   KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68

Query: 287 KTRKSLGRILLKGDNITLMMN 308
           K+RK LGRI+LKGDNITL+ +
Sbjct: 69  KSRKQLGRIMLKGDNITLLQS 89
[Close]
BLAST of Spo21043.1 vs. ExPASy Swiss-Prot
Match: RUXE_HUMAN (Small nuclear ribonucleoprotein E OS=Homo sapiens GN=SNRPE PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 8.200e-27
Identity = 57/81 (70.37%), Postives = 73/81 (90.12%), Query Frame = 1 

		  

Query: 227 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLEDAEEVNVKK 286
           KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ + RIEG IIGFDEYMNLVL+DAEE++ K 
Sbjct: 9   KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68

Query: 287 KTRKSLGRILLKGDNITLMMN 308
           K+RK LGRI+LKGDNITL+ +
Sbjct: 69  KSRKQLGRIMLKGDNITLLQS 89
[Close]
BLAST of Spo21043.1 vs. ExPASy Swiss-Prot
Match: RUXE_MOUSE (Small nuclear ribonucleoprotein E OS=Mus musculus GN=Snrpe PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 8.200e-27
Identity = 57/81 (70.37%), Postives = 73/81 (90.12%), Query Frame = 1 

		  

Query: 227 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLEDAEEVNVKK 286
           KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ + RIEG IIGFDEYMNLVL+DAEE++ K 
Sbjct: 9   KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68

Query: 287 KTRKSLGRILLKGDNITLMMN 308
           K+RK LGRI+LKGDNITL+ +
Sbjct: 69  KSRKQLGRIMLKGDNITLLQS 89
[Close]
BLAST of Spo21043.1 vs. ExPASy Swiss-Prot
Match: RUXE_PIG (Small nuclear ribonucleoprotein E OS=Sus scrofa GN=SNRPE PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 8.200e-27
Identity = 57/81 (70.37%), Postives = 73/81 (90.12%), Query Frame = 1 

		  

Query: 227 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLEDAEEVNVKK 286
           KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ + RIEG IIGFDEYMNLVL+DAEE++ K 
Sbjct: 9   KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68

Query: 287 KTRKSLGRILLKGDNITLMMN 308
           K+RK LGRI+LKGDNITL+ +
Sbjct: 69  KSRKQLGRIMLKGDNITLLQS 89
[Close]
BLAST of Spo21043.1 vs. ExPASy Swiss-Prot
Match: RUXE_CHICK (Small nuclear ribonucleoprotein E OS=Gallus gallus GN=SNRPE PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 8.200e-27
Identity = 57/81 (70.37%), Postives = 73/81 (90.12%), Query Frame = 1 

		  

Query: 227 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLEDAEEVNVKK 286
           KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ + RIEG IIGFDEYMNLVL+DAEE++ K 
Sbjct: 9   KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKT 68

Query: 287 KTRKSLGRILLKGDNITLMMN 308
           K+RK LGRI+LKGDNITL+ +
Sbjct: 69  KSRKQLGRIMLKGDNITLLQS 89
[Close]
BLAST of Spo21043.1 vs. TAIR (Arabidopsis)
Match: AT2G18740.1 (Small nuclear ribonucleoprotein family protein)

HSP 1 Score: 154.8 bits (390), Expect = 8.400e-38
Identity = 78/86 (90.70%), Postives = 82/86 (95.35%), Query Frame = 1 

		  

Query: 223 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLEDAEEV 282
           MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKD RIEGRI GFDEYMNLVL++AEEV
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 60

Query: 283 NVKKKTRKSLGRILLKGDNITLMMNT 309
           ++KK TRK LGRILLKGDNITLMMNT
Sbjct: 61  SIKKNTRKPLGRILLKGDNITLMMNT 86
[Close]
BLAST of Spo21043.1 vs. TAIR (Arabidopsis)
Match: AT4G30330.1 (Small nuclear ribonucleoprotein family protein)

HSP 1 Score: 154.8 bits (390), Expect = 8.400e-38
Identity = 78/85 (91.76%), Postives = 82/85 (96.47%), Query Frame = 1 

		  

Query: 223 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDARIEGRIIGFDEYMNLVLEDAEEV 282
           MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKD RIEGRI GFDEYMNLVL++AEEV
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 60

Query: 283 NVKKKTRKSLGRILLKGDNITLMMN 308
           ++KKKTRK LGRILLKGDNITLMMN
Sbjct: 61  SIKKKTRKPLGRILLKGDNITLMMN 85
The following BLAST results are available for this feature:
BLAST of Spo21043.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902110388|gb|KNA03701.1|1.4e-4790.2hypothetical protein SOVF_2064... [more]
gi|902222780|gb|KNA19264.1|3.5e-38100.hypothetical protein SOVF_0631... [more]
gi|902187043|gb|KNA10834.1|7.9e-3898.8hypothetical protein SOVF_1407... [more]
gi|313586495|gb|ADR71258.1|3.9e-3796.5small nuclear ribonucleoprotei... [more]
gi|566176981|ref|XP_006381848.1|5.1e-3796.5small nuclear ribonucleoprotei... [more]
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BLAST of Spo21043.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QB16_SPIOL1.0e-4790.2Uncharacterized protein (Fragm... [more]
A0A0K9RK17_SPIOL2.5e-38100.Uncharacterized protein OS=Spi... [more]
A0A0K9QU94_SPIOL5.5e-3898.8Uncharacterized protein OS=Spi... [more]
I3NMM1_HEVBR2.7e-3796.5Small nuclear ribonucleoprotei... [more]
A9PB49_POPTR3.6e-3796.5Small nuclear ribonucleoprotei... [more]
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BLAST of Spo21043.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RUXE_BOVIN8.2e-2770.3Small nuclear ribonucleoprotei... [more]
RUXE_HUMAN8.2e-2770.3Small nuclear ribonucleoprotei... [more]
RUXE_MOUSE8.2e-2770.3Small nuclear ribonucleoprotei... [more]
RUXE_PIG8.2e-2770.3Small nuclear ribonucleoprotei... [more]
RUXE_CHICK8.2e-2770.3Small nuclear ribonucleoprotei... [more]
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BLAST of Spo21043.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G18740.18.4e-3890.7Small nuclear ribonucleoprotei... [more]
AT4G30330.18.4e-3891.7Small nuclear ribonucleoprotei... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001163LSM domain, eukaryotic/archaea-typePFAMPF01423LSMcoord: 242..305
score: 5.5
IPR001163LSM domain, eukaryotic/archaea-typeSMARTSM00651Sm3coord: 241..307
score: 3.1
IPR010920LSM domainunknownSSF50182Sm-like ribonucleoproteinscoord: 234..306
score: 1.94
IPR027078Small nuclear ribonucleoprotein EPANTHERPTHR11193SMALL NUCLEAR RIBONUCLEOPROTEIN Ecoord: 223..308
score: 9.4
NoneNo IPR availableGENE3D2.30.30.100coord: 231..306
score: 9.2

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0009987 cellular process
biological_process GO:0003002 regionalization
biological_process GO:0045595 regulation of cell differentiation
biological_process GO:0033044 regulation of chromosome organization
biological_process GO:0048765 root hair cell differentiation
biological_process GO:0010090 trichome morphogenesis
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0006508 proteolysis
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0006810 transport
biological_process GO:0009058 biosynthetic process
biological_process GO:0034660 ncRNA metabolic process
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0016310 phosphorylation
biological_process GO:0009657 plastid organization
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0051083 'de novo' cotranslational protein folding
biological_process GO:0043488 regulation of mRNA stability
biological_process GO:0006449 regulation of translational termination
biological_process GO:0006396 RNA processing
biological_process GO:0009908 flower development
biological_process GO:0030488 tRNA methylation
biological_process GO:0030154 cell differentiation
biological_process GO:0051641 cellular localization
biological_process GO:0003006 developmental process involved in reproduction
biological_process GO:0016926 protein desumoylation
biological_process GO:0007018 microtubule-based movement
biological_process GO:0043414 macromolecule methylation
biological_process GO:0006529 asparagine biosynthetic process
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0001731 formation of translation preinitiation complex
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0009250 glucan biosynthetic process
biological_process GO:0009813 flavonoid biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006614 SRP-dependent cotranslational protein targeting to membrane
biological_process GO:0009451 RNA modification
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0008618 7-methylguanosine metabolic process
biological_process GO:0001510 RNA methylation
biological_process GO:0006400 tRNA modification
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0010014 meristem initiation
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0006541 glutamine metabolic process
biological_process GO:0006177 GMP biosynthetic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0045010 actin nucleation
biological_process GO:0007155 cell adhesion
biological_process GO:0016049 cell growth
biological_process GO:0071555 cell wall organization
biological_process GO:0048589 developmental growth
biological_process GO:0048449 floral organ formation
biological_process GO:0050665 hydrogen peroxide biosynthetic process
biological_process GO:0072594 establishment of protein localization to organelle
biological_process GO:0006996 organelle organization
biological_process GO:0010118 stomatal movement
biological_process GO:0010114 response to red light
biological_process GO:0009785 blue light signaling pathway
biological_process GO:0009904 chloroplast accumulation movement
biological_process GO:0009903 chloroplast avoidance movement
biological_process GO:0010362 negative regulation of anion channel activity by blue light
biological_process GO:0000160 phosphorelay signal transduction system
biological_process GO:0009638 phototropism
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0010155 regulation of proton transport
biological_process GO:0010119 regulation of stomatal movement
biological_process GO:0010218 response to far red light
biological_process GO:0009644 response to high light intensity
biological_process GO:0009744 response to sucrose
biological_process GO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine
biological_process GO:0023014 signal transduction by protein phosphorylation
biological_process GO:0000910 cytokinesis
biological_process GO:0006084 acetyl-CoA metabolic process
biological_process GO:0006306 DNA methylation
biological_process GO:0006270 DNA replication initiation
biological_process GO:0006268 DNA unwinding involved in DNA replication
biological_process GO:0009790 embryo development
biological_process GO:0051567 histone H3-K9 methylation
biological_process GO:0051726 regulation of cell cycle
biological_process GO:0042127 regulation of cell proliferation
biological_process GO:0006275 regulation of DNA replication
biological_process GO:0010082 regulation of root meristem growth
biological_process GO:0006464 cellular protein modification process
biological_process GO:0034968 histone lysine methylation
biological_process GO:0009791 post-embryonic development
biological_process GO:0006468 protein phosphorylation
biological_process GO:0035194 posttranscriptional gene silencing by RNA
biological_process GO:0070918 production of small RNA involved in gene silencing by RNA
biological_process GO:0070646 protein modification by small protein removal
biological_process GO:0006605 protein targeting
biological_process GO:0050794 regulation of cellular process
biological_process GO:0050793 regulation of developmental process
biological_process GO:0022414 reproductive process
biological_process GO:0048731 system development
biological_process GO:0048653 anther development
biological_process GO:0048508 embryonic meristem development
biological_process GO:0009942 longitudinal axis specification
biological_process GO:0009846 pollen germination
biological_process GO:0009945 radial axis specification
biological_process GO:0034969 histone arginine methylation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0031048 chromatin silencing by small RNA
biological_process GO:0045132 meiotic chromosome segregation
biological_process GO:0006813 potassium ion transport
biological_process GO:0035864 response to potassium ion
biological_process GO:0007062 sister chromatid cohesion
biological_process GO:0019430 removal of superoxide radicals
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0006906 vesicle fusion
biological_process GO:0006522 alanine metabolic process
biological_process GO:0046686 response to cadmium ion
biological_process GO:0016571 histone methylation
biological_process GO:0006544 glycine metabolic process
biological_process GO:0006096 glycolytic process
biological_process GO:0006563 L-serine metabolic process
biological_process GO:0006499 N-terminal protein myristoylation
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0009651 response to salt stress
biological_process GO:0097056 selenocysteinyl-tRNA(Sec) biosynthetic process
biological_process GO:0006434 seryl-tRNA aminoacylation
biological_process GO:0006566 threonine metabolic process
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0033036 macromolecule localization
biological_process GO:0071702 organic substance transport
biological_process GO:0010074 maintenance of meristem identity
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0009737 response to abscisic acid
biological_process GO:0000338 protein deneddylation
biological_process GO:0016579 protein deubiquitination
biological_process GO:0015031 protein transport
biological_process GO:0009821 alkaloid biosynthetic process
biological_process GO:0032259 methylation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0009920 cell plate formation involved in plant-type cell wall biogenesis
biological_process GO:0072583 clathrin-dependent endocytosis
biological_process GO:0032880 regulation of protein localization
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0010051 xylem and phloem pattern formation
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0007267 cell-cell signaling
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0006302 double-strand break repair
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0019915 lipid storage
biological_process GO:0051321 meiotic cell cycle
biological_process GO:0009933 meristem structural organization
biological_process GO:0000226 microtubule cytoskeleton organization
biological_process GO:0006312 mitotic recombination
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009640 photomorphogenesis
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0008152 metabolic process
biological_process GO:0006606 protein import into nucleus
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009909 regulation of flower development
biological_process GO:0007346 regulation of mitotic cell cycle
biological_process GO:0050826 response to freezing
biological_process GO:0010162 seed dormancy process
biological_process GO:0009845 seed germination
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0016233 telomere capping
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0010048 vernalization response
biological_process GO:0009616 virus induced gene silencing
biological_process GO:0006886 intracellular protein transport
biological_process GO:0010091 trichome branching
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006783 heme biosynthetic process
biological_process GO:0006598 polyamine catabolic process
biological_process GO:0006281 DNA repair
biological_process GO:0006816 calcium ion transport
biological_process GO:0042398 cellular modified amino acid biosynthetic process
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0006887 exocytosis
biological_process GO:0006364 rRNA processing
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0007030 Golgi organization
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0009658 chloroplast organization
biological_process GO:0046909 obsolete intermembrane transport
biological_process GO:0009698 phenylpropanoid metabolic process
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0009963 positive regulation of flavonoid biosynthetic process
biological_process GO:0010363 regulation of plant-type hypersensitive response
cellular_component GO:0009898 cytoplasmic side of plasma membrane
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0042644 chloroplast nucleoid
cellular_component GO:0016607 nuclear speck
cellular_component GO:0005773 vacuole
cellular_component GO:0009504 cell plate
cellular_component GO:0016020 membrane
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0042555 MCM complex
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005657 replication fork
cellular_component GO:0000785 chromatin
cellular_component GO:0031519 PcG protein complex
cellular_component GO:0005681 spliceosomal complex
cellular_component GO:0005634 nucleus
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0009986 cell surface
cellular_component GO:0030870 Mre11 complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0031201 SNARE complex
cellular_component GO:0000781 chromosome, telomeric region
cellular_component GO:0005786 signal recognition particle, endoplasmic reticulum targeting
cellular_component GO:0045298 tubulin complex
cellular_component GO:0032040 small-subunit processome
cellular_component GO:0009507 chloroplast
cellular_component GO:0009365 protein histidine kinase complex
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0033290 eukaryotic 48S preinitiation complex
cellular_component GO:0016282 eukaryotic 43S preinitiation complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0005829 cytosol
cellular_component GO:0018444 translation release factor complex
cellular_component GO:0005874 microtubule
cellular_component GO:0009524 phragmoplast
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005795 Golgi stack
cellular_component GO:0005871 kinesin complex
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0031012 extracellular matrix
cellular_component GO:0005730 nucleolus
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005643 nuclear pore
cellular_component GO:0031965 nuclear membrane
cellular_component GO:0009295 nucleoid
cellular_component GO:0005840 ribosome
molecular_function GO:0003922 GMP synthase (glutamine-hydrolyzing) activity
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0008235 metalloexopeptidase activity
molecular_function GO:0004177 aminopeptidase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0009882 blue light photoreceptor activity
molecular_function GO:0010181 FMN binding
molecular_function GO:0042802 identical protein binding
molecular_function GO:0000155 phosphorelay sensor kinase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0009044 xylan 1,4-beta-xylosidase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity
molecular_function GO:0030276 clathrin binding
molecular_function GO:0005515 protein binding
molecular_function GO:0000149 SNARE binding
molecular_function GO:0005484 SNAP receptor activity
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0003777 microtubule motor activity
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003678 DNA helicase activity
molecular_function GO:0004527 exonuclease activity
molecular_function GO:1901363 heterocyclic compound binding
molecular_function GO:0004828 serine-tRNA ligase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0043424 protein histidine kinase binding
molecular_function GO:0004809 tRNA (guanine-N2-)-methyltransferase activity
molecular_function GO:0008469 histone-arginine N-methyltransferase activity
molecular_function GO:0016462 pyrophosphatase activity
molecular_function GO:0009019 tRNA (guanine-N1-)-methyltransferase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0004784 superoxide dismutase activity
molecular_function GO:0030942 endoplasmic reticulum signal peptide binding
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004518 nuclease activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005047 signal recognition particle binding
molecular_function GO:0003747 translation release factor activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity
molecular_function GO:0043169 cation binding
molecular_function GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity
molecular_function GO:0035241 protein-arginine omega-N monomethyltransferase activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0000049 tRNA binding
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0008312 7S RNA binding
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0010283 pinoresinol reductase activity
molecular_function GO:0047526 2'-hydroxyisoflavone reductase activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0030750 putrescine N-methyltransferase activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0003682 chromatin binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo131070.76Barchart | Table
Spo171240.74Barchart | Table
Spo228690.74Barchart | Table
Spo238890.73Barchart | Table
Spo215310.73Barchart | Table
Spo258230.72Barchart | Table
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