Spo21067 (gene) | SpinachBase

Overview


Name	Spo21067
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Photosystem I reaction center subunit III
Location	chr4 : 105488822 .. 105489517 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTCACAATCCCCACTAACCTCTACAAACCTCTTGCTACCAAACCTAAGCATCTATCTTCTTCCTCCTTTGCACCAAGATCAAAGATTGTTTGCCAACAAGAAAATGATCAACAACAACCTAAGAAGCTAGAGCTAGCTAAGGTAGGTGCCAACGCTGCCGCTGCGTTGGCTCTTTCCTCAGTGCTACTTTCCTCATGGAGTGTAGCACCCGATGCTGCCATGGCTGACATTGCAGGGCTAACACCATGCAAGGAGTCCAAGCAGTTTGCTAAGAGGGAAAAGCAGGCCTTGAAGAAGTTGCAAGCCTCGTTGAAGCTGTACGCAGATGATAGCGCACCAGCTTTAGCGATCAAGGCTACAATGGAGAAGACCAAGAAGAGGTTCGATAACTATGGAAAGTATGGTTTGCTTTGTGGGTCTGATGGACTTCCTCATTTGATAGTGAGTGGTGATCAGAGACACTGGGGTGAGTTTATCACACCAGGGATTTTGTTCTTGTATATTGCTGGGTGGATTGGGTGGGTTGGAAGGAGTTATTTGATTGCTATTAGGGATGAGAAGAAACCTACTCAGAAGGAGATTATTATTGATGTTCCTTTGGCTTCAAGTCTTCTTTTTAGAGGCTTCAGTTGGCCTGTTGCTGCTTATAGAGAGTTGCTCAATGGTGAGCTTGTTGACAACAACTTTTAA

mRNA sequence

ATGTCTTTCACAATCCCCACTAACCTCTACAAACCTCTTGCTACCAAACCTAAGCATCTATCTTCTTCCTCCTTTGCACCAAGATCAAAGATTGTTTGCCAACAAGAAAATGATCAACAACAACCTAAGAAGCTAGAGCTAGCTAAGGTAGGTGCCAACGCTGCCGCTGCGTTGGCTCTTTCCTCAGTGCTACTTTCCTCATGGAGTGTAGCACCCGATGCTGCCATGGCTGACATTGCAGGGCTAACACCATGCAAGGAGTCCAAGCAGTTTGCTAAGAGGGAAAAGCAGGCCTTGAAGAAGTTGCAAGCCTCGTTGAAGCTGTACGCAGATGATAGCGCACCAGCTTTAGCGATCAAGGCTACAATGGAGAAGACCAAGAAGAGGTTCGATAACTATGGAAAGTATGGTTTGCTTTGTGGGTCTGATGGACTTCCTCATTTGATAGTGAGTGGTGATCAGAGACACTGGGGTGAGTTTATCACACCAGGGATTTTGTTCTTGTATATTGCTGGGTGGATTGGGTGGGTTGGAAGGAGTTATTTGATTGCTATTAGGGATGAGAAGAAACCTACTCAGAAGGAGATTATTATTGATGTTCCTTTGGCTTCAAGTCTTCTTTTTAGAGGCTTCAGTTGGCCTGTTGCTGCTTATAGAGAGTTGCTCAATGGTGAGCTTGTTGACAACAACTTTTAA

Coding sequence (CDS)

ATGTCTTTCACAATCCCCACTAACCTCTACAAACCTCTTGCTACCAAACCTAAGCATCTATCTTCTTCCTCCTTTGCACCAAGATCAAAGATTGTTTGCCAACAAGAAAATGATCAACAACAACCTAAGAAGCTAGAGCTAGCTAAGGTAGGTGCCAACGCTGCCGCTGCGTTGGCTCTTTCCTCAGTGCTACTTTCCTCATGGAGTGTAGCACCCGATGCTGCCATGGCTGACATTGCAGGGCTAACACCATGCAAGGAGTCCAAGCAGTTTGCTAAGAGGGAAAAGCAGGCCTTGAAGAAGTTGCAAGCCTCGTTGAAGCTGTACGCAGATGATAGCGCACCAGCTTTAGCGATCAAGGCTACAATGGAGAAGACCAAGAAGAGGTTCGATAACTATGGAAAGTATGGTTTGCTTTGTGGGTCTGATGGACTTCCTCATTTGATAGTGAGTGGTGATCAGAGACACTGGGGTGAGTTTATCACACCAGGGATTTTGTTCTTGTATATTGCTGGGTGGATTGGGTGGGTTGGAAGGAGTTATTTGATTGCTATTAGGGATGAGAAGAAACCTACTCAGAAGGAGATTATTATTGATGTTCCTTTGGCTTCAAGTCTTCTTTTTAGAGGCTTCAGTTGGCCTGTTGCTGCTTATAGAGAGTTGCTCAATGGTGAGCTTGTTGACAACAACTTTTAA

Protein sequence

MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNNF

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo21067.1	Spo21067.1	mRNA

Homology

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BLAST of Spo21067.1 vs. NCBI nr
Match: gi|131187|sp|P12355.1|PSAF_SPIOL (RecName: Full=Photosystem I reaction center subunit III, chloroplastic; AltName: Full=Light-harvesting complex I 17 kDa protein; AltName: Full=PSI-F; Flags: Precursor)

HSP 1 Score: 458.8 bits (1179), Expect = 5.800e-126
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1

		  
Query: 1   MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALAL 60
           MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALAL
Sbjct: 1   MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALAL 60

Query: 61  SSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIK 120
           SSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIK
Sbjct: 61  SSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIK 120

Query: 121 ATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS 180
           ATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS
Sbjct: 121 ATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS 180

Query: 181 YLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNNF 232
           YLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNNF
Sbjct: 181 YLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNNF 231

[Close]

BLAST of Spo21067.1 vs. NCBI nr
Match: gi|731357787|ref|XP_010690394.1| (PREDICTED: photosystem I reaction center subunit III, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 394.8 bits (1013), Expect = 1.000e-106
Identity = 199/230 (86.52%), Postives = 210/230 (91.30%), Query Frame = 1

		  
Query: 1   MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALAL 60
           MS TIPTNLYKPLATKP    SS   PRSK+V  Q+ +  QPKKLEL+K G N AAALAL
Sbjct: 1   MSLTIPTNLYKPLATKPPKFLSSQ-TPRSKLVVCQQQENDQPKKLELSKTGTNVAAALAL 60

Query: 61  SSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIK 120
           SSVLLSSW+VAPDAAMADIAGLTPCKESKQFAKREKQ LKKL++SLKLYA DSAPALAIK
Sbjct: 61  SSVLLSSWTVAPDAAMADIAGLTPCKESKQFAKREKQQLKKLESSLKLYAPDSAPALAIK 120

Query: 121 ATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS 180
           ATMEKTK+RF+NYG YGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS
Sbjct: 121 ATMEKTKRRFENYGNYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS 180

Query: 181 YLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNN 231
           YLIAIRDEKKPTQKEIIIDVPLAS LLFRGFSWPVAAYRELLNGEL+D+N
Sbjct: 181 YLIAIRDEKKPTQKEIIIDVPLASRLLFRGFSWPVAAYRELLNGELIDSN 229

[Close]

BLAST of Spo21067.1 vs. NCBI nr
Match: gi|702489016|ref|XP_010035276.1| (PREDICTED: photosystem I reaction center subunit III, chloroplastic [Eucalyptus grandis])

HSP 1 Score: 324.7 bits (831), Expect = 1.300e-85
Identity = 170/228 (74.56%), Postives = 187/228 (82.02%), Query Frame = 1

		  
Query: 1   MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIV-CQQENDQQQPKKLELAKVGANAAAALA 60
           MS TIPTNL KP+A  PK   S S  P + ++ C   + +Q       A      +AALA
Sbjct: 1   MSLTIPTNLSKPIAA-PKLSPSKSVRPAATLIRCSSSSPEQGSASTSAASPLQAFSAALA 60

Query: 61  LSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAI 120
           LSS+LLS    AP  A ADIAGLTPCKESKQFAKREKQ LKKL++SLKLYA DSAPALA+
Sbjct: 61  LSSILLS----APQPAAADIAGLTPCKESKQFAKREKQQLKKLESSLKLYAPDSAPALAL 120

Query: 121 KATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGR 180
           KATMEKTK+RFDNYGK GLLCG+DGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGR
Sbjct: 121 KATMEKTKRRFDNYGKQGLLCGTDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGR 180

Query: 181 SYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELV 228
           SYLIAIRDEKKPTQKEIIIDVPLAS L+FRGFSWP+AAYREL+NGEL+
Sbjct: 181 SYLIAIRDEKKPTQKEIIIDVPLASRLVFRGFSWPIAAYRELVNGELI 223

[Close]

BLAST of Spo21067.1 vs. NCBI nr
Match: gi|976910658|gb|KVH97336.1| (Photosystem I PsaF, reaction centre subunit III [Cynara cardunculus var. scolymus])

HSP 1 Score: 323.9 bits (829), Expect = 2.200e-85
Identity = 169/228 (74.12%), Postives = 187/228 (82.02%), Query Frame = 1

		  
Query: 1   MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALAL 60
           MSFTI T+ ++PL  K  H  S S    + IVC     + + K  +        +AALAL
Sbjct: 1   MSFTISTSFFQPLDLKSSHFGSRSKLTSTGIVCSGAGAEDKSKVTDGNASLKALSAALAL 60

Query: 61  SSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIK 120
           SS+L+SS +V    AMADI+GLTPCK+SKQFAKREKQ LKKL++SLKLYA DSAPALAIK
Sbjct: 61  SSILVSS-TVPALPAMADISGLTPCKDSKQFAKREKQQLKKLESSLKLYAPDSAPALAIK 120

Query: 121 ATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS 180
           ATMEKTK+RFDNYGK GLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS
Sbjct: 121 ATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS 180

Query: 181 YLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVD 229
           YLIAIRDEKKPTQKEIIIDVPLAS L+FRGFSWPVAAYRE LNGEL+D
Sbjct: 181 YLIAIRDEKKPTQKEIIIDVPLASRLVFRGFSWPVAAYREFLNGELID 227

[Close]

BLAST of Spo21067.1 vs. NCBI nr
Match: gi|149242532|pdb|2O01|F (Chain F, The Structure Of A Plant Photosystem I Supercomplex At 3.4 Angstrom Resolution)

HSP 1 Score: 318.5 bits (815), Expect = 9.300e-84
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1

		  
Query: 78  DIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKKRFDNYGKYG 137
           DIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKKRFDNYGKYG
Sbjct: 1   DIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKKRFDNYGKYG 60

Query: 138 LLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEII 197
           LLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEII
Sbjct: 61  LLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEII 120

Query: 198 IDVPLASSLLFRGFSWPVAAYRELLNGELVDNNF 232
           IDVPLASSLLFRGFSWPVAAYRELLNGELVDNNF
Sbjct: 121 IDVPLASSLLFRGFSWPVAAYRELLNGELVDNNF 154

[Close]

BLAST of Spo21067.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RVH9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_023270 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 4.000e-126
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1

		  
Query: 1   MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALAL 60
           MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALAL
Sbjct: 1   MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALAL 60

Query: 61  SSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIK 120
           SSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIK
Sbjct: 61  SSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIK 120

Query: 121 ATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS 180
           ATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS
Sbjct: 121 ATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS 180

Query: 181 YLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNNF 232
           YLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNNF
Sbjct: 181 YLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNNF 231

[Close]

BLAST of Spo21067.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EEM4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g214300 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 7.100e-107
Identity = 199/230 (86.52%), Postives = 210/230 (91.30%), Query Frame = 1

		  
Query: 1   MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALAL 60
           MS TIPTNLYKPLATKP    SS   PRSK+V  Q+ +  QPKKLEL+K G N AAALAL
Sbjct: 1   MSLTIPTNLYKPLATKPPKFLSSQ-TPRSKLVVCQQQENDQPKKLELSKTGTNVAAALAL 60

Query: 61  SSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIK 120
           SSVLLSSW+VAPDAAMADIAGLTPCKESKQFAKREKQ LKKL++SLKLYA DSAPALAIK
Sbjct: 61  SSVLLSSWTVAPDAAMADIAGLTPCKESKQFAKREKQQLKKLESSLKLYAPDSAPALAIK 120

Query: 121 ATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS 180
           ATMEKTK+RF+NYG YGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS
Sbjct: 121 ATMEKTKRRFENYGNYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS 180

Query: 181 YLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNN 231
           YLIAIRDEKKPTQKEIIIDVPLAS LLFRGFSWPVAAYRELLNGEL+D+N
Sbjct: 181 YLIAIRDEKKPTQKEIIIDVPLASRLLFRGFSWPVAAYRELLNGELIDSN 229

[Close]

BLAST of Spo21067.1 vs. UniProtKB/TrEMBL
Match: A0A058ZXT4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00389 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 9.100e-86
Identity = 170/228 (74.56%), Postives = 187/228 (82.02%), Query Frame = 1

		  
Query: 1   MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIV-CQQENDQQQPKKLELAKVGANAAAALA 60
           MS TIPTNL KP+A  PK   S S  P + ++ C   + +Q       A      +AALA
Sbjct: 1   MSLTIPTNLSKPIAA-PKLSPSKSVRPAATLIRCSSSSPEQGSASTSAASPLQAFSAALA 60

Query: 61  LSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAI 120
           LSS+LLS    AP  A ADIAGLTPCKESKQFAKREKQ LKKL++SLKLYA DSAPALA+
Sbjct: 61  LSSILLS----APQPAAADIAGLTPCKESKQFAKREKQQLKKLESSLKLYAPDSAPALAL 120

Query: 121 KATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGR 180
           KATMEKTK+RFDNYGK GLLCG+DGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGR
Sbjct: 121 KATMEKTKRRFDNYGKQGLLCGTDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGR 180

Query: 181 SYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELV 228
           SYLIAIRDEKKPTQKEIIIDVPLAS L+FRGFSWP+AAYREL+NGEL+
Sbjct: 181 SYLIAIRDEKKPTQKEIIIDVPLASRLVFRGFSWPIAAYRELVNGELI 223

[Close]

BLAST of Spo21067.1 vs. UniProtKB/TrEMBL
Match: A0A103XV29_CYNCS (Photosystem I PsaF, reaction centre subunit III OS=Cynara cardunculus var. scolymus GN=Ccrd_000561 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.500e-85
Identity = 169/228 (74.12%), Postives = 187/228 (82.02%), Query Frame = 1

		  
Query: 1   MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALAL 60
           MSFTI T+ ++PL  K  H  S S    + IVC     + + K  +        +AALAL
Sbjct: 1   MSFTISTSFFQPLDLKSSHFGSRSKLTSTGIVCSGAGAEDKSKVTDGNASLKALSAALAL 60

Query: 61  SSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIK 120
           SS+L+SS +V    AMADI+GLTPCK+SKQFAKREKQ LKKL++SLKLYA DSAPALAIK
Sbjct: 61  SSILVSS-TVPALPAMADISGLTPCKDSKQFAKREKQQLKKLESSLKLYAPDSAPALAIK 120

Query: 121 ATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS 180
           ATMEKTK+RFDNYGK GLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS
Sbjct: 121 ATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS 180

Query: 181 YLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVD 229
           YLIAIRDEKKPTQKEIIIDVPLAS L+FRGFSWPVAAYRE LNGEL+D
Sbjct: 181 YLIAIRDEKKPTQKEIIIDVPLASRLVFRGFSWPVAAYREFLNGELID 227

[Close]

BLAST of Spo21067.1 vs. UniProtKB/TrEMBL
Match: V4UI69_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016540mg PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 4.200e-83
Identity = 171/231 (74.03%), Postives = 186/231 (80.52%), Query Frame = 1

		  
Query: 1   MSFTIPTNLYKPLATKPKHLSSSSFAPRSK--IVCQQE--NDQQQPKKLELAKVGANAAA 60
           MS TIPTNL KPL  KP+  S  S A  SK  I C     +++      + AK     +A
Sbjct: 1   MSLTIPTNLSKPLL-KPRSNSQLSHAKLSKQMITCSSSAGSEETSSSSGKAAKPLQAFSA 60

Query: 61  ALALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPA 120
           ALALSS+LLS    AP  A+ADI+GLTPCKESKQFAKREKQ LKKL++SLKLYA DSAPA
Sbjct: 61  ALALSSILLS----APQPAVADISGLTPCKESKQFAKREKQQLKKLESSLKLYAPDSAPA 120

Query: 121 LAIKATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGW 180
           LAIKATMEKTK+RFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPG+LFLYIAGWIGW
Sbjct: 121 LAIKATMEKTKRRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGLLFLYIAGWIGW 180

Query: 181 VGRSYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELV 228
           VGRSYLIAI  EKKP  KEIIIDVPLAS L+FRGFSWPVAAYRE +NGELV
Sbjct: 181 VGRSYLIAISGEKKPAMKEIIIDVPLASRLVFRGFSWPVAAYREFVNGELV 226

[Close]

BLAST of Spo21067.1 vs. ExPASy Swiss-Prot
Match: PSAF_SPIOL (Photosystem I reaction center subunit III, chloroplastic OS=Spinacia oleracea GN=PSAF PE=1 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 3.600e-128
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1

		  
Query: 1   MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALAL 60
           MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALAL
Sbjct: 1   MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALAL 60

Query: 61  SSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIK 120
           SSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIK
Sbjct: 61  SSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIK 120

Query: 121 ATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS 180
           ATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS
Sbjct: 121 ATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS 180

Query: 181 YLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNNF 232
           YLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNNF
Sbjct: 181 YLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVDNNF 231

[Close]

BLAST of Spo21067.1 vs. ExPASy Swiss-Prot
Match: PSAF_FLATR (Photosystem I reaction center subunit III, chloroplastic OS=Flaveria trinervia GN=PSAF PE=2 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 3.800e-85
Identity = 169/231 (73.16%), Postives = 189/231 (81.82%), Query Frame = 1

		  
Query: 1   MSFTIPTNLYKPLAT---KPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAA 60
           MSFTI T+  +PL     K   ++S S    + IVC    D++       + + A  +AA
Sbjct: 1   MSFTISTSFLQPLEISNLKSSPITSKSKVTSTSIVCSGSTDEKINNADGKSSLKA-LSAA 60

Query: 61  LALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPAL 120
           LALSS+L+SS +V    A ADI+GLTPCKESKQFAKREKQ+LKKL++SLKLYA DSAPAL
Sbjct: 61  LALSSILVSS-TVPALPASADISGLTPCKESKQFAKREKQSLKKLESSLKLYAPDSAPAL 120

Query: 121 AIKATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWV 180
           AIKATMEKTK+RFDNYGK GLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWV
Sbjct: 121 AIKATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWV 180

Query: 181 GRSYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVD 229
           GRSYLIAIRDEKKPTQKEIIIDVPLA+ LLFRGFSWPVAAYRE LNGEL+D
Sbjct: 181 GRSYLIAIRDEKKPTQKEIIIDVPLATKLLFRGFSWPVAAYREYLNGELID 229

[Close]

BLAST of Spo21067.1 vs. ExPASy Swiss-Prot
Match: PSAF_ARATH (Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana GN=PSAF PE=1 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.400e-76
Identity = 151/227 (66.52%), Postives = 175/227 (77.09%), Query Frame = 1

		  
Query: 1   MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALAL 60
           MS TIP NL     +  K L+ S     ++ VC  +       +   A      +AA+AL
Sbjct: 1   MSLTIPANLVLNPRSN-KSLTQSVPKSSARFVCSDDKSSSSTPQSMKA-----FSAAVAL 60

Query: 61  SSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIK 120
           SS+LLS    AP  A+ADI+GLTPCK+SKQFAKREKQ +KKL++SLKLYA +SAPALA+ 
Sbjct: 61  SSILLS----APMPAVADISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPESAPALALN 120

Query: 121 ATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS 180
           A +EKTK+RFDNYGKYGLLCGSDGLPHLIV+GDQRHWGEFITPGILFLYIAGWIGWVGRS
Sbjct: 121 AQIEKTKRRFDNYGKYGLLCGSDGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRS 180

Query: 181 YLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELV 228
           YLIAI  EKKP  KEIIIDVPLAS ++FRGF WPVAAYRE LNG+L+
Sbjct: 181 YLIAISGEKKPAMKEIIIDVPLASRIIFRGFIWPVAAYREFLNGDLI 217

[Close]

BLAST of Spo21067.1 vs. ExPASy Swiss-Prot
Match: PSAF_HORVU (Photosystem I reaction center subunit III, chloroplastic OS=Hordeum vulgare GN=PSAF PE=1 SV=2)

HSP 1 Score: 280.8 bits (717), Expect = 1.300e-74
Identity = 136/173 (78.61%), Postives = 156/173 (90.17%), Query Frame = 1

		  
Query: 55  AAALALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSA 114
           +AALALSSVLLSS + +P  A ADIAGLTPCKESK FAKREKQ++KKL +SLK YA DSA
Sbjct: 55  SAALALSSVLLSSAATSPPPAAADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSA 114

Query: 115 PALAIKATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWI 174
           PALAI+AT++KTK+RF+NYGK+GLLCGSDGLPHLIVSGDQRHWGEFITPG+LFLYIAGWI
Sbjct: 115 PALAIQATIDKTKRRFENYGKFGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWI 174

Query: 175 GWVGRSYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELV 228
           GWVGRSYLIA+  EKKP  +EIIIDV LA+ ++ RGF WPVAAYREL+NG+LV
Sbjct: 175 GWVGRSYLIAVSGEKKPAMREIIIDVELAARIIPRGFIWPVAAYRELINGDLV 227

[Close]

BLAST of Spo21067.1 vs. ExPASy Swiss-Prot
Match: PSAF_CHLRE (Photosystem I reaction center subunit III, chloroplastic OS=Chlamydomonas reinhardtii GN=PSAF PE=1 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.400e-50
Identity = 115/220 (52.27%), Postives = 146/220 (66.36%), Query Frame = 1

		  
Query: 17  PKHLSSSSFAPRSK----IVCQQENDQQQPKKLELAKVGANAAAALALSSVLLSSWSVAP 76
           P   +SS  AP S+    + CQ + ++        +KVG   AA+   ++V LS    AP
Sbjct: 8   PAVKASSRVAPSSRRALRVACQAQKNETA------SKVGTALAASALAAAVSLS----AP 67

Query: 77  DAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKKRFDN 136
            AAMADIAGLTPC ESK +AK EK+ LK L+  LK Y  DSAPA+A+KATME+TK RF N
Sbjct: 68  SAAMADIAGLTPCSESKAYAKLEKKELKTLEKRLKQYEADSAPAVALKATMERTKARFAN 127

Query: 137 YGKYGLLCGSDGLPHLI----VSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDE 196
           Y K GLLCG+DGLPHLI    ++    H GE   P   FLY+AG+IG+VGR YLIA++ E
Sbjct: 128 YAKAGLLCGNDGLPHLIADPGLALKYGHAGEVFIPTFGFLYVAGYIGYVGRQYLIAVKGE 187

Query: 197 KKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVD 229
            KPT KEIIIDVPLA+ L ++G  WP+AA +EL  G L++
Sbjct: 188 AKPTDKEIIIDVPLATKLAWQGAGWPLAAVQELQRGTLLE 217

[Close]

BLAST of Spo21067.1 vs. TAIR (Arabidopsis)
Match: AT1G31330.1 (photosystem I subunit F)

HSP 1 Score: 287.3 bits (734), Expect = 8.100e-78
Identity = 151/227 (66.52%), Postives = 175/227 (77.09%), Query Frame = 1

		  
Query: 1   MSFTIPTNLYKPLATKPKHLSSSSFAPRSKIVCQQENDQQQPKKLELAKVGANAAAALAL 60
           MS TIP NL     +  K L+ S     ++ VC  +       +   A      +AA+AL
Sbjct: 1   MSLTIPANLVLNPRSN-KSLTQSVPKSSARFVCSDDKSSSSTPQSMKA-----FSAAVAL 60

Query: 61  SSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIK 120
           SS+LLS    AP  A+ADI+GLTPCK+SKQFAKREKQ +KKL++SLKLYA +SAPALA+ 
Sbjct: 61  SSILLS----APMPAVADISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPESAPALALN 120

Query: 121 ATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRS 180
           A +EKTK+RFDNYGKYGLLCGSDGLPHLIV+GDQRHWGEFITPGILFLYIAGWIGWVGRS
Sbjct: 121 AQIEKTKRRFDNYGKYGLLCGSDGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRS 180

Query: 181 YLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELV 228
           YLIAI  EKKP  KEIIIDVPLAS ++FRGF WPVAAYRE LNG+L+
Sbjct: 181 YLIAISGEKKPAMKEIIIDVPLASRIIFRGFIWPVAAYREFLNGDLI 217

The following BLAST results are available for this feature:

BLAST of Spo21067.1 vs. NCBI nr
BLAST of Spo21067.1 vs. UniProtKB/TrEMBL
BLAST of Spo21067.1 vs. ExPASy Swiss-Prot
BLAST of Spo21067.1 vs. TAIR (Arabidopsis)

BLAST of Spo21067.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|131187\|sp\|P12355.1\|PSAF_SPIOL	5.8e-126	100.	RecName: Full=Photosystem I re...	[more]
gi\|731357787\|ref\|XP_010690394.1\|	1.0e-106	86.5	PREDICTED: photosystem I react...	[more]
gi\|702489016\|ref\|XP_010035276.1\|	1.3e-85	74.5	PREDICTED: photosystem I react...	[more]
gi\|976910658\|gb\|KVH97336.1\|	2.2e-85	74.1	Photosystem I PsaF, reaction c...	[more]
gi\|149242532\|pdb\|2O01\|F	9.3e-84	100.	Chain F, The Structure Of A Pl...	[more]

BLAST of Spo21067.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9RVH9_SPIOL	4.0e-126	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8EEM4_BETVU	7.1e-107	86.5	Uncharacterized protein OS=Bet...	[more]
A0A058ZXT4_EUCGR	9.1e-86	74.5	Uncharacterized protein OS=Euc...	[more]
A0A103XV29_CYNCS	1.5e-85	74.1	Photosystem I PsaF, reaction c...	[more]
V4UI69_9ROSI	4.2e-83	74.0	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo21067.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
PSAF_SPIOL	3.6e-128	100.	Photosystem I reaction center ...	[more]
PSAF_FLATR	3.8e-85	73.1	Photosystem I reaction center ...	[more]
PSAF_ARATH	1.4e-76	66.5	Photosystem I reaction center ...	[more]
PSAF_HORVU	1.3e-74	78.6	Photosystem I reaction center ...	[more]
PSAF_CHLRE	1.4e-50	52.2	Photosystem I reaction center ...	[more]

BLAST of Spo21067.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT1G31330.1	8.1e-78	66.5	photosystem I subunit F	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003666	Photosystem I PsaF, reaction centre subunit III	GENE3D	1.10.8.110		coord: 78..229 score: 7.2
IPR003666	Photosystem I PsaF, reaction centre subunit III	PFAM	PF02507	PSI_PsaF	coord: 60..229 score: 9.4
IPR003666	Photosystem I PsaF, reaction centre subunit III	unknown	SSF81536	Subunit III of photosystem I reaction centre, PsaF	coord: 78..229 score: 3.66
None	No IPR available	unknown	Coil	Coil	coord: 92..112 scor
None	No IPR available	PANTHER	PTHR34939	FAMILY NOT NAMED	coord: 3..230 score: 1.2E
None	No IPR available	PANTHER	PTHR34939:SF1	PHOTOSYSTEM I REACTION CENTER SUBUNIT III, CHLOROPLASTIC	coord: 3..230 score: 1.2E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0030001	metal ion transport
biological_process	GO:0006950	response to stress
biological_process	GO:0006354	DNA-templated transcription, elongation
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0042545	cell wall modification
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0001510	RNA methylation
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0006810	transport
biological_process	GO:0006427	histidyl-tRNA aminoacylation
biological_process	GO:0010114	response to red light
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0006547	histidine metabolic process
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0044262	cellular carbohydrate metabolic process
biological_process	GO:0044085	cellular component biogenesis
biological_process	GO:0009987	cellular process
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0010218	response to far red light
biological_process	GO:0015031	protein transport
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006754	ATP biosynthetic process
biological_process	GO:0006605	protein targeting
biological_process	GO:0044281	small molecule metabolic process
biological_process	GO:0009639	response to red or far red light
biological_process	GO:1901564	organonitrogen compound metabolic process
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
biological_process	GO:1901576	organic substance biosynthetic process
biological_process	GO:0006139	nucleobase-containing compound metabolic process
biological_process	GO:0019682	glyceraldehyde-3-phosphate metabolic process
biological_process	GO:0006412	translation
biological_process	GO:0009637	response to blue light
biological_process	GO:0051186	cofactor metabolic process
biological_process	GO:0016043	cellular component organization
biological_process	GO:0044249	cellular biosynthetic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0006457	protein folding
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0009657	plastid organization
biological_process	GO:0034660	ncRNA metabolic process
biological_process	GO:0031323	regulation of cellular metabolic process
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:0010099	regulation of photomorphogenesis
biological_process	GO:0006636	unsaturated fatty acid biosynthetic process
biological_process	GO:0006766	vitamin metabolic process
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0008152	metabolic process
biological_process	GO:0006084	acetyl-CoA metabolic process
biological_process	GO:0019722	calcium-mediated signaling
biological_process	GO:0005513	detection of calcium ion
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0009612	response to mechanical stimulus
biological_process	GO:0009249	protein lipoylation
biological_process	GO:0016049	cell growth
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0019375	galactolipid biosynthetic process
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0016036	cellular response to phosphate starvation
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0019748	secondary metabolic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0060255	regulation of macromolecule metabolic process
biological_process	GO:0009723	response to ethylene
biological_process	GO:0080090	regulation of primary metabolic process
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0019048	modulation by virus of host morphology or physiology
biological_process	GO:0015979	photosynthesis
biological_process	GO:0044070	regulation of anion transport
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0030244	cellulose biosynthetic process
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0009750	response to fructose
biological_process	GO:0006733	oxidoreduction coenzyme metabolic process
biological_process	GO:0009749	response to glucose
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0030154	cell differentiation
biological_process	GO:0006546	glycine catabolic process
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0009695	jasmonic acid biosynthetic process
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0009107	lipoate biosynthetic process
biological_process	GO:0009117	nucleotide metabolic process
biological_process	GO:0006897	endocytosis
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0006782	protoporphyrinogen IX biosynthetic process
biological_process	GO:0006571	tyrosine biosynthetic process
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0008643	carbohydrate transport
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0033587	shikimate biosynthetic process
biological_process	GO:0009094	L-phenylalanine biosynthetic process
biological_process	GO:0009423	chorismate biosynthetic process
biological_process	GO:0042255	ribosome assembly
biological_process	GO:0009853	photorespiration
biological_process	GO:1901575	organic substance catabolic process
biological_process	GO:0042430	indole-containing compound metabolic process
biological_process	GO:0043090	amino acid import
biological_process	GO:0042023	DNA endoreduplication
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0051302	regulation of cell division
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0006397	mRNA processing
biological_process	GO:0006771	riboflavin metabolic process
biological_process	GO:0019497	hexachlorocyclohexane metabolic process
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0035970	peptidyl-threonine dephosphorylation
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0009744	response to sucrose
biological_process	GO:0006506	GPI anchor biosynthetic process
biological_process	GO:0006364	rRNA processing
biological_process	GO:0071482	cellular response to light stimulus
biological_process	GO:0006833	water transport
biological_process	GO:0009266	response to temperature stimulus
biological_process	GO:0006972	hyperosmotic response
biological_process	GO:0015996	chlorophyll catabolic process
biological_process	GO:0006508	proteolysis
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0010136	ureide catabolic process
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0051604	protein maturation
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0051510	regulation of unidimensional cell growth
biological_process	GO:0006554	lysine catabolic process
biological_process	GO:0042372	phylloquinone biosynthetic process
biological_process	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0018874	benzoate metabolic process
biological_process	GO:0019482	beta-alanine metabolic process
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0006550	isoleucine catabolic process
biological_process	GO:0006552	leucine catabolic process
biological_process	GO:0046251	limonene catabolic process
biological_process	GO:0006568	tryptophan metabolic process
biological_process	GO:0009735	response to cytokinin
biological_process	GO:0006574	valine catabolic process
biological_process	GO:0042631	cellular response to water deprivation
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0051301	cell division
biological_process	GO:0009790	embryo development
biological_process	GO:0006096	glycolytic process
biological_process	GO:0016120	carotene biosynthetic process
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0010103	stomatal complex morphogenesis
biological_process	GO:0016123	xanthophyll biosynthetic process
biological_process	GO:0032259	methylation
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0048767	root hair elongation
biological_process	GO:0009407	toxin catabolic process
biological_process	GO:0010090	trichome morphogenesis
biological_process	GO:0009056	catabolic process
biological_process	GO:0019752	carboxylic acid metabolic process
biological_process	GO:0006816	calcium ion transport
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006007	glucose catabolic process
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0009651	response to salt stress
biological_process	GO:0007033	vacuole organization
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0005768	endosome
cellular_component	GO:0044425	membrane part
cellular_component	GO:0034357	photosynthetic membrane
cellular_component	GO:0045277	respiratory chain complex IV
cellular_component	GO:0017177	glucosidase II complex
cellular_component	GO:0030076	light-harvesting complex
cellular_component	GO:0048046	apoplast
cellular_component	GO:0009512	cytochrome b6f complex
cellular_component	GO:0044434	chloroplast part
cellular_component	GO:0009707	chloroplast outer membrane
cellular_component	GO:0005839	proteasome core complex
cellular_component	GO:0009536	plastid
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0005746	mitochondrial respiratory chain
cellular_component	GO:0042651	thylakoid membrane
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005840	ribosome
cellular_component	GO:0000325	plant-type vacuole
cellular_component	GO:0019773	proteasome core complex, alpha-subunit complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009524	phragmoplast
cellular_component	GO:0005829	cytosol
cellular_component	GO:0000502	proteasome complex
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0032991	protein-containing complex
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009543	chloroplast thylakoid lumen
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009538	photosystem I reaction center
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0005741	mitochondrial outer membrane
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0030093	chloroplast photosystem I
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016853	isomerase activity
molecular_function	GO:0003993	acid phosphatase activity
molecular_function	GO:0016758	transferase activity, transferring hexosyl groups
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0047652	allantoate deiminase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0030234	enzyme regulator activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0005351	carbohydrate:proton symporter activity
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0050661	NADP binding
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0008883	glutamyl-tRNA reductase activity
molecular_function	GO:0050897	cobalt ion binding
molecular_function	GO:0004853	uroporphyrinogen decarboxylase activity
molecular_function	GO:0030554	adenyl nucleotide binding
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0003856	3-dehydroquinate synthase activity
molecular_function	GO:0005198	structural molecule activity
molecular_function	GO:0004601	peroxidase activity
molecular_function	GO:0004129	cytochrome-c oxidase activity
molecular_function	GO:0016866	intramolecular transferase activity
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0004821	histidine-tRNA ligase activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0008080	N-acetyltransferase activity
molecular_function	GO:0005516	calmodulin binding
molecular_function	GO:0008308	voltage-gated anion channel activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0033926	glycopeptide alpha-N-acetylgalactosaminidase activity
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0016992	lipoate synthase activity
molecular_function	GO:0031177	phosphopantetheine binding
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity
molecular_function	GO:0070569	uridylyltransferase activity
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0008553	proton-exporting ATPase activity, phosphorylative mechanism
molecular_function	GO:0004298	threonine-type endopeptidase activity
molecular_function	GO:0004575	sucrose alpha-glucosidase activity
molecular_function	GO:0042626	ATPase activity, coupled to transmembrane movement of substances
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0052624	2-phytyl-1,4-naphthoquinone methyltransferase activity
molecular_function	GO:0051750	delta3,5-delta2,4-dienoyl-CoA isomerase activity
molecular_function	GO:0004300	enoyl-CoA hydratase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0010181	FMN binding
molecular_function	GO:0045435	lycopene epsilon cyclase activity
molecular_function	GO:0047617	acyl-CoA hydrolase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0015078	proton transmembrane transporter activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0004721	phosphoprotein phosphatase activity
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups
molecular_function	GO:0000166	nucleotide binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo14416	0.84	Barchart \| Table
Spo16821	0.83	Barchart \| Table
Spo24857	0.82	Barchart \| Table
Spo27102	0.82	Barchart \| Table
Spo12202	0.82	Barchart \| Table
Spo03019	0.78	Barchart \| Table
Spo06294	0.76	Barchart \| Table
Spo00175	0.76	Barchart \| Table
Spo11961	0.76	Barchart \| Table
Spo03024	0.76	Barchart \| Table
Spo01714	0.75	Barchart \| Table
Spo11446	0.74	Barchart \| Table
Spo06473	0.74	Barchart \| Table
Spo09290	0.74	Barchart \| Table
Spo05073	0.74	Barchart \| Table
Spo14441	0.74	Barchart \| Table
Spo07390	0.73	Barchart \| Table
Spo12128	0.73	Barchart \| Table
Spo19113	0.73	Barchart \| Table
Spo02068	0.73	Barchart \| Table
Spo03736	0.73	Barchart \| Table
Spo13029	0.73	Barchart \| Table
Spo01356	0.72	Barchart \| Table
Spo05955	0.72	Barchart \| Table
Spo07619	0.72	Barchart \| Table
Spo20544	0.72	Barchart \| Table
Spo06031	0.71	Barchart \| Table
Spo27062	0.71	Barchart \| Table
Spo24712	0.71	Barchart \| Table
Spo01929	0.71	Barchart \| Table
Spo02085	0.71	Barchart \| Table
Spo18782	0.71	Barchart \| Table
Spo02453	0.71	Barchart \| Table
Spo14678	0.71	Barchart \| Table
Spo03608	0.71	Barchart \| Table
Spo12127	0.71	Barchart \| Table
Spo11733	0.71	Barchart \| Table
Spo05093	0.71	Barchart \| Table
Spo05225	0.71	Barchart \| Table
Spo08969	0.71	Barchart \| Table
Spo05731	0.71	Barchart \| Table
Spo08799	0.71	Barchart \| Table
Spo02573	0.70	Barchart \| Table
Spo00344	0.70	Barchart \| Table
Spo01261	0.70	Barchart \| Table
Spo01357	0.70	Barchart \| Table
Spo06293	0.70	Barchart \| Table
Spo06676	0.70	Barchart \| Table
Spo06689	0.70	Barchart \| Table
Spo08546	0.70	Barchart \| Table
Spo09669	0.70	Barchart \| Table
Spo10815	0.70	Barchart \| Table
Spo10923	0.70	Barchart \| Table
Spo11317	0.70	Barchart \| Table
Spo13214	0.70	Barchart \| Table
Spo19245	0.70	Barchart \| Table
Spo21691	0.70	Barchart \| Table
Spo22529	0.70	Barchart \| Table
Spo23717	0.70	Barchart \| Table
Spo26768	0.69	Barchart \| Table
Spo04908	0.69	Barchart \| Table
Spo10940	0.69	Barchart \| Table
Spo06949	0.69	Barchart \| Table
Spo22760	0.69	Barchart \| Table
Spo09070	0.69	Barchart \| Table
Spo27081	0.69	Barchart \| Table
Spo10388	0.69	Barchart \| Table
Spo02484	0.69	Barchart \| Table
Spo12176	0.69	Barchart \| Table
Spo10529	0.69	Barchart \| Table
Spo26349	0.69	Barchart \| Table
Spo05431	0.68	Barchart \| Table
Spo09803	0.68	Barchart \| Table
Spo10537	0.68	Barchart \| Table
Spo11098	0.68	Barchart \| Table
Spo12364	0.68	Barchart \| Table
Spo26958	0.68	Barchart \| Table
Spo14087	0.68	Barchart \| Table
Spo15639	0.68	Barchart \| Table
Spo18575	0.68	Barchart \| Table
Spo28058	0.68	Barchart \| Table
Spo01858	0.68	Barchart \| Table
Spo25918	0.68	Barchart \| Table
Spo10473	0.67	Barchart \| Table
Spo14225	0.67	Barchart \| Table
Spo14438	0.67	Barchart \| Table
Spo09118	0.67	Barchart \| Table
Spo10427	0.67	Barchart \| Table
Spo17209	0.67	Barchart \| Table
Spo17371	0.67	Barchart \| Table
Spo17679	0.67	Barchart \| Table
Spo18502	0.67	Barchart \| Table
Spo02107	0.67	Barchart \| Table
Spo20869	0.67	Barchart \| Table
Spo10285	0.67	Barchart \| Table
Spo06004	0.67	Barchart \| Table
Spo24368	0.67	Barchart \| Table
Spo08850	0.67	Barchart \| Table
Spo25159	0.67	Barchart \| Table
Spo25347	0.67	Barchart \| Table
Spo25917	0.67	Barchart \| Table
Spo05228	0.67	Barchart \| Table
Spo26925	0.67	Barchart \| Table
Spo04996	0.67	Barchart \| Table
Spo11543	0.67	Barchart \| Table
Spo26891	0.67	Barchart \| Table
Spo04082	0.67	Barchart \| Table
Spo03933	0.67	Barchart \| Table
Spo04838	0.66	Barchart \| Table
Spo17940	0.66	Barchart \| Table
Spo18185	0.66	Barchart \| Table
Spo13952	0.66	Barchart \| Table
Spo06805	0.66	Barchart \| Table
Spo14194	0.66	Barchart \| Table
Spo14202	0.66	Barchart \| Table
Spo03251	0.66	Barchart \| Table
Spo02797	0.66	Barchart \| Table
Spo00912	0.66	Barchart \| Table
Spo02643	0.66	Barchart \| Table
Spo14454	0.66	Barchart \| Table
Spo14661	0.66	Barchart \| Table
Spo16786	0.66	Barchart \| Table
Spo22955	0.66	Barchart \| Table
Spo17046	0.66	Barchart \| Table
Spo23219	0.66	Barchart \| Table
Spo08999	0.66	Barchart \| Table
Spo19965	0.66	Barchart \| Table
Spo12376	0.66	Barchart \| Table
Spo12894	0.66	Barchart \| Table
Spo07586	0.66	Barchart \| Table
Spo13490	0.66	Barchart \| Table
Spo18471	0.65	Barchart \| Table
Spo02606	0.65	Barchart \| Table
Spo08772	0.65	Barchart \| Table
Spo02280	0.65	Barchart \| Table
Spo01840	0.65	Barchart \| Table
Spo01448	0.65	Barchart \| Table
Spo26427	0.65	Barchart \| Table
Spo01914	0.65	Barchart \| Table
Spo20686	0.65	Barchart \| Table
Spo07184	0.65	Barchart \| Table
Spo07501	0.65	Barchart \| Table
Spo25851	0.65	Barchart \| Table
Spo14008	0.65	Barchart \| Table
Spo03195	0.65	Barchart \| Table