Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCAGTCAGAACACAAACCTCGCGGATATGGACCGCAAAACGGAGAAACCGAAGACCCCAGTAGATCAACGCAGCAGTTACCATTAGACCAGGGTAAAGGGTACCCCCAATAATTCGTCCCAAAGGGTACCAACTCTCAGAATCAAACCAATTCCAAAATTCATAAAACCCTTTTTCCGTCAAATAAAGGGTTGTGCGATAATTGAAATATGGATCAAATTCATGGATCATACTCTCGTAGCGAAGAACACTAAATAAACGAGTACTAAAAGCGAGGATATAAACCAGGAAAAGGATTGTCACCCTGATTAGGATTTCCTGTTGTTTGGTTTTCAGCTTAAAAGATTTGAAAGTGAAATTGAAACCTGAGTTGCTGATCAATGGATCTGGAGATTTTGGATCTTGAGGTTTTGCCATGGCTTCCGCTTTGGCAGCCATTGTTGATGATCAGATTTCTTGATCTGGGCAATTGAGATTTCGAAAGGTGAGGGGAAGGGAGAGTGAAATTAGATCAATGGGTTGAATATTTAGGATTAATTCAGCATTGTGATAAAAAAAATAAAAATAAAAAGGGTTTATGGGAAATGGGGAAATTGAAAAACCCTTAGTGAAATACTGAGTGAAAGGGATGAATCTGAGGTGAATGTTCAATTGAAAGTGGATCTAGACAGTGACATTTTCATGTGGTCACAACTCACAAAGATTAAAGTTGAATATACGGAGTAGGATTAAGGATTATACGGCCATTGCTGAATACGGAATAACTGAATAGTCTAGTGGTGGACTGGTGAGTGGTGGACTGGTGAGTGGTCGGAGTGGTGAGGCAACGCGCGGATGGTGCAGGGGCCTGCACGTAGATCTACGTGTACCTGCACCAAAACGCAAAAACATTAAAAGAAAACGAAAAAGAACATAACAAACTAAACAGAAAGAACATAATAAAGTAAACGAAAAGAACATTAACTAAAACCTGAAAAGAACACTAATGCTAAAAAACTAAAGAAAATATACAAAAATGAAAATAACATATTCTCTCTCCTGATAAACTATAAAAAGAACAATTATTTTTCAAAAAGAACATCGTGTGAAAAATACAACATAAAAAAAAAAAAAAAAAAAAAAATTATCGATAATGTTATTAAATCCTACAACCTTTAAAAGCAAGAACTTGATTTTAACTATTCATNATTATCGATAATGTTATTAAATCCTACAACCTTTAAAAGCAAGAACTTGATTTTAACTATTCATTCAATAGTTAGTTGACTAAAATACCCTTACATTTCTTCCATTTATCCTTTGTGCCATTTTCTCATCTGCTGCCACGTCGCTTTTTGCTGAGCCGCTGATTGATTTTGCAGATGGGCTCCCATTTGGTTTCTGCTCCAGCATTAACCCTAACACTAAGATTCTTTTCTCTCTCACTTGCCTCTCCTTCCCCTTCATCCTTTTGTCTCTCAATGTCTGTAGCCATCTCCCATGGCGGACGGCGAAATTCTTTCGGAACCACCATCAAACAGAATGATATTCATATGAATTATCGGTATTACTTATGATCTTGGTTCAACGATCTAAATTCCTGCGTTTACGTGTTCTTAGTTCAACAGATTTTAATTGTTCGGGGTTTACAATGAGGTGAGTTTCGTCCACCAACTCAATTTAAAGTTAGAGTTTGATTTTGTTTCTCCGATTTCGTTCAATGAGTTTTTTTTTAAATTTTTTTTAATAATTAAAAAAATGGACTGAGTTAATTTCCGATTGTTTTTTGTAGAATGCGTGTTGATATGAACGATGATTGAAATTTTCTTCCTCACAACGAGTACTCCTTCTGAATCTCCTCACTACAATTCGTCTCTCTCTCCTTGGTATGATTCTCCTTTCTCTGGATTTTCCGAATTAGGGTTTTGTTTCTTGGGTTTAATTGTTGATTTTGTTGAATTATGCTGGTTTAATTGAATTGGAATATTTAATATTTCAACGTTTCTTTTTCTGCAACACGATATAATCATTGTGACATTCGGTTATGATATATGCAACGTTGCGTTTTTATCTCAAATGAACGGAAAGGGAAGGGATGTTGGTATATGATTAATGTGGTATCCTCTTGGATTTGGTGTTAAAGTTGAGGAAATTAAGAGCTTCTTCGATTTTATTTTTTTGGGTTTCTGTGAATTTTTTTGATTGGGAGTGAGACTCAGTGAATCTGGAGTGGAATCTGTGCTCGAAATTGCTGGTCTCTAGGCTGAATTTTTTCCATCCCTTTTCATGAATTTTAATTTAATTTTTACGTTCTTTTCTATCTTCACTTCAATGGGCTAAAATGTTAAATGATGCCTGACATTCTCCCATGTATTATCTGTCAACCTTTGATTGGTCATTTTCTTCCATTTTGATTCCCGTTTTTGTGAATTTTCCCTTGATTTTCCAAAGAGCGATTTTGATTGGTAAAATAGAACTTTTTTTCCTGGAATTATGTTTTAATTTGGATTGGTGCCTTTCTTTTTGGGTATTTTTCAGAGTCCTACATGAGCTTTTCAAAAGACATGGATGAGGAGTATGAGAAACTCATCAAAAGAATGAACCCACCTAGGTATATTTCCTTCTCTACTAACATAAAACGGCTCGTTTGATAGGCGGTAATAATTGACCATGGCCTGATTTTGTTTGTTGGTCATTTGTTTCTCAGGGTGGTGATTAATAATGAAAGTTCCAAAAATGCAACAGGCATGGAATACTCCTTGAAGTTGTTCAAATTCTTACTGATCTTAATCTTGTCATTACCAAAGCTTATATTTCTTCTGATGGTGGCTGGTTCATGGATGGTAAGTATTACCCATCTTTTGTTTGTTCTTTTAGAATTTTGCTTTATTTCTCCAACATTTCTCATGACAGTTTATGTTAAGAACCTAAATCATTTTGGTCTAAAGAGCTATTCTTCTTGTTGTTATTCTTGAAATGTGATTTCATTAAGCATATTTTGTTAACCTTTTTTATATATTTGTCCTTTACAAAATCCAGTTTTTAATGTGACTGATCAAGATGGGAACAAGATTACAGATGAAGAAATCCTTGATTTTATCCAGAAGGTATAA ATGGCGCAGTCAGAACACAAACCTCGCGGATATGGACCGCAAAACGGAGAAACCGAAGACCCCAGTAGATCAACGCAGCAGTTACCATTAGACCAGGAGTCCTACATGAGCTTTTCAAAAGACATGGATGAGGAGTATGAGAAACTCATCAAAAGAATGAACCCACCTAGGCATGGAATACTCCTTGAAGTTGTTCAAATTCTTACTGATCTTAATCTTGTCATTACCAAAGCTTATATTTCTTCTGATGGTGGCTGGTTCATGGATGTTTTTAATGTGACTGATCAAGATGGGAACAAGATTACAGATGAAGAAATCCTTGATTTTATCCAGAAGGTATAA ATGGCGCAGTCAGAACACAAACCTCGCGGATATGGACCGCAAAACGGAGAAACCGAAGACCCCAGTAGATCAACGCAGCAGTTACCATTAGACCAGGAGTCCTACATGAGCTTTTCAAAAGACATGGATGAGGAGTATGAGAAACTCATCAAAAGAATGAACCCACCTAGGCATGGAATACTCCTTGAAGTTGTTCAAATTCTTACTGATCTTAATCTTGTCATTACCAAAGCTTATATTTCTTCTGATGGTGGCTGGTTCATGGATGTTTTTAATGTGACTGATCAAGATGGGAACAAGATTACAGATGAAGAAATCCTTGATTTTATCCAGAAGGTATAA MAQSEHKPRGYGPQNGETEDPSRSTQQLPLDQESYMSFSKDMDEEYEKLIKRMNPPRHGILLEVVQILTDLNLVITKAYISSDGGWFMDVFNVTDQDGNKITDEEILDFIQKV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo21094.1 vs. NCBI nr
Match: gi|902170515|gb|KNA07849.1| (hypothetical protein SOVF_168060 [Spinacia oleracea]) HSP 1 Score: 144.1 bits (362), Expect = 1.500e-31 Identity = 77/98 (78.57%), Postives = 77/98 (78.57%), Query Frame = 1
BLAST of Spo21094.1 vs. NCBI nr
Match: gi|731339956|ref|XP_010681133.1| (PREDICTED: uncharacterized protein LOC104896128 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 137.1 bits (344), Expect = 1.900e-29 Identity = 73/101 (72.28%), Postives = 77/101 (76.24%), Query Frame = 1
BLAST of Spo21094.1 vs. NCBI nr
Match: gi|297738125|emb|CBI27326.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 136.0 bits (341), Expect = 4.200e-29 Identity = 70/98 (71.43%), Postives = 76/98 (77.55%), Query Frame = 1
BLAST of Spo21094.1 vs. NCBI nr
Match: gi|731372327|ref|XP_010650073.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100259472 [Vitis vinifera]) HSP 1 Score: 136.0 bits (341), Expect = 4.200e-29 Identity = 70/98 (71.43%), Postives = 76/98 (77.55%), Query Frame = 1
BLAST of Spo21094.1 vs. NCBI nr
Match: gi|922419407|ref|XP_013613718.1| (PREDICTED: ACT domain-containing protein ACR4 [Brassica oleracea var. oleracea]) HSP 1 Score: 131.7 bits (330), Expect = 7.900e-28 Identity = 68/98 (69.39%), Postives = 75/98 (76.53%), Query Frame = 1
BLAST of Spo21094.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QKS5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_168060 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.100e-31 Identity = 77/98 (78.57%), Postives = 77/98 (78.57%), Query Frame = 1
BLAST of Spo21094.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C9N7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g139860 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.300e-29 Identity = 73/101 (72.28%), Postives = 77/101 (76.24%), Query Frame = 1
BLAST of Spo21094.1 vs. UniProtKB/TrEMBL
Match: A0A078JJ49_BRANA (BnaA02g35780D protein OS=Brassica napus GN=BnaA02g35780D PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 5.500e-28 Identity = 68/98 (69.39%), Postives = 75/98 (76.53%), Query Frame = 1
BLAST of Spo21094.1 vs. UniProtKB/TrEMBL
Match: M4FB64_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 5.500e-28 Identity = 68/98 (69.39%), Postives = 75/98 (76.53%), Query Frame = 1
BLAST of Spo21094.1 vs. UniProtKB/TrEMBL
Match: A0A0D3AP59_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 5.500e-28 Identity = 68/98 (69.39%), Postives = 75/98 (76.53%), Query Frame = 1
BLAST of Spo21094.1 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 8.400e-30 Identity = 68/98 (69.39%), Postives = 74/98 (75.51%), Query Frame = 1
BLAST of Spo21094.1 vs. ExPASy Swiss-Prot
Match: ACR5_ARATH (ACT domain-containing protein ACR5 OS=Arabidopsis thaliana GN=ACR5 PE=2 SV=2) HSP 1 Score: 112.5 bits (280), Expect = 3.100e-24 Identity = 57/98 (58.16%), Postives = 70/98 (71.43%), Query Frame = 1
BLAST of Spo21094.1 vs. ExPASy Swiss-Prot
Match: ACR6_ARATH (ACT domain-containing protein ACR6 OS=Arabidopsis thaliana GN=ACR6 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 3.400e-23 Identity = 56/91 (61.54%), Postives = 63/91 (69.23%), Query Frame = 1
BLAST of Spo21094.1 vs. ExPASy Swiss-Prot
Match: ACR3_ARATH (ACT domain-containing protein ACR3 OS=Arabidopsis thaliana GN=ACR3 PE=2 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.200e-20 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 1
BLAST of Spo21094.1 vs. ExPASy Swiss-Prot
Match: ACR1_ARATH (ACT domain-containing protein ACR1 OS=Arabidopsis thaliana GN=ACR1 PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 8.200e-17 Identity = 45/98 (45.92%), Postives = 64/98 (65.31%), Query Frame = 1
BLAST of Spo21094.1 vs. TAIR (Arabidopsis)
Match: AT1G69040.2 (ACT domain repeat 4) HSP 1 Score: 131.0 bits (328), Expect = 4.800e-31 Identity = 68/98 (69.39%), Postives = 74/98 (75.51%), Query Frame = 1
BLAST of Spo21094.1 vs. TAIR (Arabidopsis)
Match: AT2G03730.1 (ACT domain repeat 5) HSP 1 Score: 112.5 bits (280), Expect = 1.800e-25 Identity = 57/98 (58.16%), Postives = 70/98 (71.43%), Query Frame = 1
BLAST of Spo21094.1 vs. TAIR (Arabidopsis)
Match: AT3G01990.1 (ACT domain repeat 6) HSP 1 Score: 109.0 bits (271), Expect = 1.900e-24 Identity = 56/91 (61.54%), Postives = 63/91 (69.23%), Query Frame = 1
BLAST of Spo21094.1 vs. TAIR (Arabidopsis)
Match: AT1G76990.1 (ACT domain repeat 3) HSP 1 Score: 100.5 bits (249), Expect = 6.900e-22 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 1
BLAST of Spo21094.1 vs. TAIR (Arabidopsis)
Match: AT5G65890.1 (ACT domain repeat 1) HSP 1 Score: 87.8 bits (216), Expect = 4.600e-18 Identity = 45/98 (45.92%), Postives = 64/98 (65.31%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo21094.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo21094.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo21094.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo21094.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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